BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00011293
         (430 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022873357.1| probable RNA polymerase II transcription fac...   172   5e-48
ref|XP_020554483.1| probable RNA polymerase II transcription fac...   167   8e-47
gb|PIN09333.1| RNA polymerase II transcription initiation/nucleo...   167   1e-46
ref|XP_018626691.1| PREDICTED: probable RNA polymerase II transc...   167   2e-46
ref|XP_009758566.1| PREDICTED: probable RNA polymerase II transc...   167   2e-46
gb|PHU04081.1| putative RNA polymerase II transcription factor B...   168   2e-46
gb|PHT35492.1| putative RNA polymerase II transcription factor B...   168   2e-46
ref|XP_016545480.1| PREDICTED: probable RNA polymerase II transc...   168   2e-46
ref|XP_018626690.1| PREDICTED: probable RNA polymerase II transc...   167   2e-46
ref|XP_019251833.1| PREDICTED: probable RNA polymerase II transc...   167   3e-46
ref|XP_009758565.1| PREDICTED: probable RNA polymerase II transc...   167   3e-46
ref|XP_009602018.1| PREDICTED: probable RNA polymerase II transc...   167   3e-46
ref|XP_011097708.1| probable RNA polymerase II transcription fac...   167   3e-46
ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   166   7e-46
ref|XP_015088806.1| PREDICTED: probable RNA polymerase II transc...   166   1e-45
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   164   4e-45
ref|XP_010327201.1| PREDICTED: probable RNA polymerase II transc...   164   4e-45
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   163   2e-44
ref|XP_015166456.1| PREDICTED: probable RNA polymerase II transc...   160   1e-43
gb|AGQ44775.1| general transcription factor [Camellia sinensis]       155   1e-43

>ref|XP_022873357.1| probable RNA polymerase II transcription factor B subunit 1-1 [Olea
           europaea var. sylvestris]
          Length = 600

 Score =  172 bits (436), Expect = 5e-48
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 514 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVQPMLQA 573

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDADVQ+RSAKSGERPNGF+
Sbjct: 574 LDAAFAHYDADVQKRSAKSGERPNGFM 600


>ref|XP_020554483.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X2 [Sesamum indicum]
          Length = 514

 Score =  167 bits (424), Expect = 8e-47
 Identities = 82/87 (94%), Positives = 84/87 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKYLY KVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA
Sbjct: 428 ELLKHFWSSYPITTKYLYAKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 487

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFA+YDADVQ+RS KSGERPNG V
Sbjct: 488 LDAAFAYYDADVQKRSGKSGERPNGSV 514


>gb|PIN09333.1| RNA polymerase II transcription initiation/nucleotide excision
           repair factor TFIIH, subunit TFB1 [Handroanthus
           impetiginosus]
          Length = 526

 Score =  167 bits (423), Expect = 1e-46
 Identities = 81/87 (93%), Positives = 85/87 (97%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKYLYTKV RLK+AMSQVYPKLQEIKESV SD+RHQVSLLVHPMLQA
Sbjct: 439 ELLKHFWSSYPITTKYLYTKVGRLKEAMSQVYPKLQEIKESVLSDYRHQVSLLVHPMLQA 498

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDADVQ+RSAK+GERPNGFV
Sbjct: 499 LDAAFAHYDADVQKRSAKTGERPNGFV 525


>ref|XP_018626691.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X3 [Nicotiana tomentosiformis]
          Length = 565

 Score =  167 bits (424), Expect = 2e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPIT KY YTKVTRLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 479 ELLKHFWSSYPITAKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 538

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGF 173
           LDAAFAHYDAD+Q+RSAKSGERPNGF
Sbjct: 539 LDAAFAHYDADIQKRSAKSGERPNGF 564


>ref|XP_009758566.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Nicotiana sylvestris]
          Length = 565

 Score =  167 bits (424), Expect = 2e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPIT KY YTKVTRLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 479 ELLKHFWSSYPITAKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 538

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGF 173
           LDAAFAHYDAD+Q+RSAKSGERPNGF
Sbjct: 539 LDAAFAHYDADIQKRSAKSGERPNGF 564


>gb|PHU04081.1| putative RNA polymerase II transcription factor B subunit 1-1
           [Capsicum chinense]
          Length = 600

 Score =  168 bits (425), Expect = 2e-46
 Identities = 81/87 (93%), Positives = 84/87 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY YTKVTRLKDAMSQ+YPKLQE+KESVQSD RHQVSLLV PMLQA
Sbjct: 514 ELLKHFWSSYPITTKYFYTKVTRLKDAMSQIYPKLQEMKESVQSDMRHQVSLLVQPMLQA 573

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDADVQ+RSAKSGERPNGFV
Sbjct: 574 LDAAFAHYDADVQKRSAKSGERPNGFV 600


>gb|PHT35492.1| putative RNA polymerase II transcription factor B subunit 1-1
           [Capsicum baccatum]
          Length = 600

 Score =  168 bits (425), Expect = 2e-46
 Identities = 81/87 (93%), Positives = 84/87 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY YTKVTRLKDAMSQ+YPKLQE+KESVQSD RHQVSLLV PMLQA
Sbjct: 514 ELLKHFWSSYPITTKYFYTKVTRLKDAMSQIYPKLQEMKESVQSDMRHQVSLLVQPMLQA 573

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDADVQ+RSAKSGERPNGFV
Sbjct: 574 LDAAFAHYDADVQKRSAKSGERPNGFV 600


>ref|XP_016545480.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Capsicum annuum]
 gb|PHT69546.1| putative RNA polymerase II transcription factor B subunit 1-1
           [Capsicum annuum]
          Length = 600

 Score =  168 bits (425), Expect = 2e-46
 Identities = 81/87 (93%), Positives = 84/87 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY YTKVTRLKDAMSQ+YPKLQE+KESVQSD RHQVSLLV PMLQA
Sbjct: 514 ELLKHFWSSYPITTKYFYTKVTRLKDAMSQIYPKLQEMKESVQSDMRHQVSLLVQPMLQA 573

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDADVQ+RSAKSGERPNGFV
Sbjct: 574 LDAAFAHYDADVQKRSAKSGERPNGFV 600


>ref|XP_018626690.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Nicotiana tomentosiformis]
          Length = 584

 Score =  167 bits (424), Expect = 2e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPIT KY YTKVTRLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 498 ELLKHFWSSYPITAKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 557

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGF 173
           LDAAFAHYDAD+Q+RSAKSGERPNGF
Sbjct: 558 LDAAFAHYDADIQKRSAKSGERPNGF 583


>ref|XP_019251833.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Nicotiana attenuata]
          Length = 599

 Score =  167 bits (424), Expect = 3e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPIT KY YTKVTRLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 513 ELLKHFWSSYPITAKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 572

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGF 173
           LDAAFAHYDAD+Q+RSAKSGERPNGF
Sbjct: 573 LDAAFAHYDADIQKRSAKSGERPNGF 598


>ref|XP_009758565.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Nicotiana sylvestris]
 ref|XP_016465826.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Nicotiana tabacum]
          Length = 599

 Score =  167 bits (424), Expect = 3e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPIT KY YTKVTRLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 513 ELLKHFWSSYPITAKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 572

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGF 173
           LDAAFAHYDAD+Q+RSAKSGERPNGF
Sbjct: 573 LDAAFAHYDADIQKRSAKSGERPNGF 598


>ref|XP_009602018.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Nicotiana tomentosiformis]
          Length = 599

 Score =  167 bits (424), Expect = 3e-46
 Identities = 80/86 (93%), Positives = 83/86 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPIT KY YTKVTRLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 513 ELLKHFWSSYPITAKYFYTKVTRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 572

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGF 173
           LDAAFAHYDAD+Q+RSAKSGERPNGF
Sbjct: 573 LDAAFAHYDADIQKRSAKSGERPNGF 598


>ref|XP_011097708.1| probable RNA polymerase II transcription factor B subunit 1-1
           isoform X1 [Sesamum indicum]
          Length = 600

 Score =  167 bits (424), Expect = 3e-46
 Identities = 82/87 (94%), Positives = 84/87 (96%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKYLY KVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA
Sbjct: 514 ELLKHFWSSYPITTKYLYAKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 573

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFA+YDADVQ+RS KSGERPNG V
Sbjct: 574 LDAAFAYYDADVQKRSGKSGERPNGSV 600


>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Solanum tuberosum]
          Length = 599

 Score =  166 bits (421), Expect = 7e-46
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY Y KVTRLKDAMSQ+YPKLQEIKESVQSD RHQVSLLV PMLQA
Sbjct: 513 ELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQA 572

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDAD+Q+RSAKSGERPNGFV
Sbjct: 573 LDAAFAHYDADIQKRSAKSGERPNGFV 599


>ref|XP_015088806.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Solanum pennellii]
          Length = 599

 Score =  166 bits (419), Expect = 1e-45
 Identities = 80/87 (91%), Positives = 83/87 (95%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY Y KVTRLKDAMSQ+YPKLQEIKESVQSD RHQVSLLV PMLQA
Sbjct: 513 ELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQA 572

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDAD+Q+RSAKSGERPNGFV
Sbjct: 573 LDAAFAHYDADLQKRSAKSGERPNGFV 599


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X2 [Solanum lycopersicum]
          Length = 599

 Score =  164 bits (416), Expect = 4e-45
 Identities = 79/87 (90%), Positives = 83/87 (95%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY Y KVTRLKDAMSQ+YPKLQEIKESVQSD RHQVSLLV PMLQA
Sbjct: 513 ELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQA 572

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDAD+Q+RSA+SGERPNGFV
Sbjct: 573 LDAAFAHYDADLQKRSARSGERPNGFV 599


>ref|XP_010327201.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Solanum lycopersicum]
          Length = 608

 Score =  164 bits (416), Expect = 4e-45
 Identities = 79/87 (90%), Positives = 83/87 (95%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITTKY Y KVTRLKDAMSQ+YPKLQEIKESVQSD RHQVSLLV PMLQA
Sbjct: 522 ELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQEIKESVQSDVRHQVSLLVQPMLQA 581

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDAD+Q+RSA+SGERPNGFV
Sbjct: 582 LDAAFAHYDADLQKRSARSGERPNGFV 608


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Vitis vinifera]
 emb|CBI39821.3| unnamed protein product, partial [Vitis vinifera]
          Length = 602

 Score =  163 bits (412), Expect = 2e-44
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELL+HFWSSYPITT YLYTK +RLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 516 ELLRHFWSSYPITTTYLYTKASRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 575

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFAHYDAD Q+RSA+SGERPNGFV
Sbjct: 576 LDAAFAHYDADQQKRSARSGERPNGFV 602


>ref|XP_015166456.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 isoform X1 [Solanum tuberosum]
          Length = 603

 Score =  160 bits (406), Expect = 1e-43
 Identities = 80/91 (87%), Positives = 83/91 (91%), Gaps = 4/91 (4%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQ----EIKESVQSDFRHQVSLLVHP 263
           ELLKHFWSSYPITTKY Y KVTRLKDAMSQ+YPKLQ    EIKESVQSD RHQVSLLV P
Sbjct: 513 ELLKHFWSSYPITTKYFYAKVTRLKDAMSQIYPKLQLMFQEIKESVQSDVRHQVSLLVQP 572

Query: 262 MLQALDAAFAHYDADVQRRSAKSGERPNGFV 170
           MLQALDAAFAHYDAD+Q+RSAKSGERPNGFV
Sbjct: 573 MLQALDAAFAHYDADIQKRSAKSGERPNGFV 603


>gb|AGQ44775.1| general transcription factor [Camellia sinensis]
          Length = 340

 Score =  155 bits (392), Expect = 1e-43
 Identities = 75/87 (86%), Positives = 80/87 (91%)
 Frame = -1

Query: 430 ELLKHFWSSYPITTKYLYTKVTRLKDAMSQVYPKLQEIKESVQSDFRHQVSLLVHPMLQA 251
           ELLKHFWSSYPITT YLY KV RLKDAMSQ+YPKLQEIKESVQSDFRHQVSLLV PMLQA
Sbjct: 254 ELLKHFWSSYPITTSYLYVKVGRLKDAMSQIYPKLQEIKESVQSDFRHQVSLLVQPMLQA 313

Query: 250 LDAAFAHYDADVQRRSAKSGERPNGFV 170
           LDAAFA YDAD+Q+RSAK G+R NG+V
Sbjct: 314 LDAAFARYDADLQKRSAKGGDRTNGYV 340