BLASTX nr result
ID: Rehmannia30_contig00011225
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00011225
(588 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022864605.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 73 1e-15
gb|PIN00782.1| ATP-dependent RNA helicase [Handroanthus impetigi... 65 3e-13
ref|XP_011087584.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 65 4e-13
ref|XP_022862006.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 64 1e-11
ref|XP_012842389.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 2e-11
ref|XP_012839814.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 59 7e-10
gb|EYU35387.1| hypothetical protein MIMGU_mgv1a001660mg [Erythra... 59 7e-10
ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 56 4e-09
ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 55 4e-09
dbj|GAV90554.1| zf-CCHC domain-containing protein/DEAD domain-co... 60 7e-08
ref|XP_008450498.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 62 9e-08
dbj|GAU11385.1| hypothetical protein TSUD_343760 [Trifolium subt... 62 1e-07
gb|PNX71413.1| DEAD-box ATP-dependent RNA helicase chloroplastic... 61 1e-07
ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 53 2e-07
ref|XP_021681744.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 61 2e-07
ref|XP_020517729.1| LOW QUALITY PROTEIN: DEAD-box ATP-dependent ... 48 2e-07
gb|ERM97583.1| hypothetical protein AMTR_s00244p00011780 [Ambore... 48 2e-07
ref|XP_022157919.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 61 2e-07
ref|XP_022157915.1| DEAD-box ATP-dependent RNA helicase 3, chlor... 61 2e-07
emb|CDP17754.1| unnamed protein product [Coffea canephora] 60 3e-07
>ref|XP_022864605.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Olea
europaea var. sylvestris]
Length = 760
Score = 73.2 bits (178), Expect(2) = 1e-15
Identities = 35/45 (77%), Positives = 37/45 (82%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDWLDND 137
LPALQDDGPPSDYYGRFSNT+RR R SRD R R+SRDWLD D
Sbjct: 644 LPALQDDGPPSDYYGRFSNTDRRSGRDSRDR-RHTRSSRDWLDRD 687
Score = 37.4 bits (85), Expect(2) = 1e-15
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLIGDRRS SPSFGS DR
Sbjct: 717 WLIGDRRSGRSPSFGSNDR 735
>gb|PIN00782.1| ATP-dependent RNA helicase [Handroanthus impetiginosus]
Length = 755
Score = 65.1 bits (157), Expect(2) = 3e-13
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDWLDND 137
LP LQDDGP SDYYG+FSN++RR R S+ RGFR+SRDWLD++
Sbjct: 641 LPPLQDDGPRSDYYGKFSNSDRRGDRRSQ---RGFRSSRDWLDDN 682
Score = 37.4 bits (85), Expect(2) = 3e-13
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLIGD+RS+ SPSFGS+DR
Sbjct: 712 WLIGDKRSSRSPSFGSRDR 730
>ref|XP_011087584.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Sesamum
indicum]
Length = 770
Score = 65.1 bits (157), Expect(2) = 4e-13
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 13/57 (22%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRD-------------NIRGFRTSRDWLDN 134
LP LQDDGPPSD+YGRFSN++RR R SRD + R FR+SRDWLD+
Sbjct: 640 LPPLQDDGPPSDFYGRFSNSDRRSPRGSRDQRGGSRDQRGGSRDRRSFRSSRDWLDD 696
Score = 37.0 bits (84), Expect(2) = 4e-13
Identities = 15/19 (78%), Positives = 18/19 (94%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLIGDR+S+ SPSFGS+DR
Sbjct: 727 WLIGDRQSSRSPSFGSRDR 745
>ref|XP_022862006.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Olea
europaea var. sylvestris]
Length = 764
Score = 64.3 bits (155), Expect(2) = 1e-11
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDWLDND 137
LPALQDDGPPSDYYGRFSN++R QR S+D RG R SRD D+D
Sbjct: 644 LPALQDDGPPSDYYGRFSNSDRSSQRVSKDR-RGGRFSRDRRDSD 687
Score = 32.7 bits (73), Expect(2) = 1e-11
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLIGDR+S S SFGS DR
Sbjct: 721 WLIGDRQSGRSSSFGSSDR 739
>ref|XP_012842389.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Erythranthe guttata]
gb|EYU33253.1| hypothetical protein MIMGU_mgv1a001505mg [Erythranthe guttata]
Length = 806
Score = 70.5 bits (171), Expect(2) = 2e-11
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDWLDND 137
LP LQDDGP SDYYGRFSN ERRPQR S D F++S DWLD +
Sbjct: 641 LPTLQDDGPASDYYGRFSNNERRPQRGSTDRRSSFKSSGDWLDGN 685
Score = 26.2 bits (56), Expect(2) = 2e-11
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFG 261
WLI DR+++ SPS+G
Sbjct: 721 WLISDRKTSRSPSYG 735
>ref|XP_012839814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic-like [Erythranthe guttata]
Length = 869
Score = 58.9 bits (141), Expect(2) = 7e-10
Identities = 32/50 (64%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQR------SSRDNIRGFRTSRDWLDN 134
LP LQDDGP SDYYGRFSN ERRPQR SRD+ G SR W DN
Sbjct: 752 LPPLQDDGPASDYYGRFSNNERRPQRGGGGGGGSRDSRGG--GSRSWSDN 799
Score = 32.3 bits (72), Expect(2) = 7e-10
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WL+ DRRS+ SPS GS+DR
Sbjct: 825 WLVSDRRSSRSPSGGSRDR 843
>gb|EYU35387.1| hypothetical protein MIMGU_mgv1a001660mg [Erythranthe guttata]
Length = 777
Score = 58.9 bits (141), Expect(2) = 7e-10
Identities = 32/50 (64%), Positives = 33/50 (66%), Gaps = 6/50 (12%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQR------SSRDNIRGFRTSRDWLDN 134
LP LQDDGP SDYYGRFSN ERRPQR SRD+ G SR W DN
Sbjct: 660 LPPLQDDGPASDYYGRFSNNERRPQRGGGGGGGSRDSRGG--GSRSWSDN 707
Score = 32.3 bits (72), Expect(2) = 7e-10
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WL+ DRRS+ SPS GS+DR
Sbjct: 733 WLVSDRRSSRSPSGGSRDR 751
>ref|XP_010932029.2| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
3, chloroplastic [Elaeis guineensis]
Length = 762
Score = 56.2 bits (134), Expect(2) = 4e-09
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDWLDND 137
LPALQDDGPP+D YGRFSN +R + SR+ RG R+SR+W D
Sbjct: 649 LPALQDDGPPTDNYGRFSNRDRGSRGGSRE--RGHRSSRNWGSRD 691
Score = 32.3 bits (72), Expect(2) = 4e-09
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLIG RRS S SFGS+DR
Sbjct: 722 WLIGGRRSGRSSSFGSRDR 740
>ref|XP_010245402.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
isoform X1 [Nelumbo nucifera]
Length = 761
Score = 54.7 bits (130), Expect(2) = 4e-09
Identities = 27/41 (65%), Positives = 29/41 (70%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LPALQDDGPP D YGRFSN ER + SR+ GFR SR W
Sbjct: 643 LPALQDDGPPGDNYGRFSNRERGSRGGSRER-GGFRGSRGW 682
Score = 33.9 bits (76), Expect(2) = 4e-09
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLIG +RSN S SFGS+DR
Sbjct: 718 WLIGSKRSNRSSSFGSRDR 736
>dbj|GAV90554.1| zf-CCHC domain-containing protein/DEAD domain-containing
protein/Helicase_C domain-containing protein/GUCT
domain-containing protein [Cephalotus follicularis]
Length = 758
Score = 60.1 bits (144), Expect(2) = 7e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LPALQDDGPPSDYYG+FSN +R P RD RG R+SR W
Sbjct: 645 LPALQDDGPPSDYYGKFSNRDRSPLGGPRDR-RGGRSSRSW 684
Score = 24.3 bits (51), Expect(2) = 7e-08
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 217 WLIGDRRSNPSPS 255
WLIG RRSN PS
Sbjct: 718 WLIGGRRSNRLPS 730
>ref|XP_008450498.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Cucumis melo]
Length = 748
Score = 62.0 bits (149), Expect = 9e-08
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LP LQDDGPPSD YGRFS ER + SSRD RGFRTSR W
Sbjct: 637 LPPLQDDGPPSDNYGRFSGRERNSRNSSRDR-RGFRTSRGW 676
>dbj|GAU11385.1| hypothetical protein TSUD_343760 [Trifolium subterraneum]
Length = 721
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LPALQDDGP SD+YG+FS+ ER +R SRD GFR+SR W
Sbjct: 622 LPALQDDGPASDFYGKFSDRERNSRRGSRDGRGGFRSSRGW 662
>gb|PNX71413.1| DEAD-box ATP-dependent RNA helicase chloroplastic-like, partial
[Trifolium pratense]
Length = 286
Score = 60.8 bits (146), Expect = 1e-07
Identities = 27/41 (65%), Positives = 32/41 (78%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LPALQDDGP SD+YG+FS+ ER +R SRD GFR+SR W
Sbjct: 159 LPALQDDGPASDFYGKFSDRERSNRRGSRDGRGGFRSSRGW 199
>ref|XP_008798630.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic
[Phoenix dactylifera]
Length = 762
Score = 53.1 bits (126), Expect(2) = 2e-07
Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 7/52 (13%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIR-----GFRTSRDW--LDND 137
LPALQDDGPP+D YGRFSN +R + SSRD R G +SR+W DND
Sbjct: 642 LPALQDDGPPTDNYGRFSNWDRGSRGSSRDRGRRGSRNGGGSSRNWGGRDND 693
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WLI RRS S SFGS+DR
Sbjct: 722 WLISGRRSGRSSSFGSRDR 740
>ref|XP_021681744.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like [Hevea
brasiliensis]
Length = 775
Score = 61.2 bits (147), Expect = 2e-07
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LP+LQDDGPPSDYYGRFS+ +R + SR RGFR SR W
Sbjct: 662 LPSLQDDGPPSDYYGRFSSRDRGARGGSRGGQRGFRASRGW 702
>ref|XP_020517729.1| LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 3,
chloroplastic [Amborella trichopoda]
Length = 453
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LP LQDDGP D YGRFS+ +R + SRD R FR SR+W
Sbjct: 334 LPPLQDDGPSGDNYGRFSSRDRGGRGGSRDR-RCFRGSRNW 373
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WL+G+RRSN S SFGS+DR
Sbjct: 410 WLVGNRRSNRSSSFGSRDR 428
>gb|ERM97583.1| hypothetical protein AMTR_s00244p00011780 [Amborella trichopoda]
Length = 207
Score = 47.8 bits (112), Expect(2) = 2e-07
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LP LQDDGP D YGRFS+ +R + SRD R FR SR+W
Sbjct: 88 LPPLQDDGPSGDNYGRFSSRDRGGRGGSRDR-RCFRGSRNW 127
Score = 35.0 bits (79), Expect(2) = 2e-07
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 217 WLIGDRRSNPSPSFGSKDR 273
WL+G+RRSN S SFGS+DR
Sbjct: 164 WLVGNRRSNRSSSFGSRDR 182
>ref|XP_022157919.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X2
[Momordica charantia]
Length = 755
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LP LQDDGPPSD YGRFS ER + +SRD RGFRTSR W
Sbjct: 649 LPPLQDDGPPSDNYGRFSGRERNSRNNSRDR-RGFRTSRGW 688
>ref|XP_022157915.1| DEAD-box ATP-dependent RNA helicase 3, chloroplastic isoform X1
[Momordica charantia]
Length = 761
Score = 60.8 bits (146), Expect = 2e-07
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LP LQDDGPPSD YGRFS ER + +SRD RGFRTSR W
Sbjct: 649 LPPLQDDGPPSDNYGRFSGRERNSRNNSRDR-RGFRTSRGW 688
>emb|CDP17754.1| unnamed protein product [Coffea canephora]
Length = 779
Score = 60.5 bits (145), Expect = 3e-07
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = +3
Query: 3 LPALQDDGPPSDYYGRFSNTERRPQRSSRDNIRGFRTSRDW 125
LPALQDDGPPSDYYG+FSN ER + S RD RG R+SR W
Sbjct: 654 LPALQDDGPPSDYYGKFSNRERGSRGSFRDQ-RGSRSSRSW 693