BLASTX nr result
ID: Rehmannia30_contig00011025
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00011025
(577 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011074832.1| SWI/SNF complex subunit SWI3C isoform X1 [Se... 50 4e-11
ref|XP_020548192.1| SWI/SNF complex subunit SWI3C isoform X2 [Se... 50 4e-11
ref|XP_019154827.1| PREDICTED: SWI/SNF complex subunit SWI3C [Ip... 45 9e-10
gb|PIN16991.1| Chromatin remodeling factor subunit [Handroanthus... 48 2e-09
emb|CDP10951.1| unnamed protein product [Coffea canephora] 40 5e-08
ref|XP_022875895.1| SWI/SNF complex subunit SWI3C isoform X1 [Ol... 46 1e-07
ref|XP_022875896.1| SWI/SNF complex subunit SWI3C isoform X2 [Ol... 46 1e-07
gb|PIN17056.1| Chromatin remodeling factor subunit [Handroanthus... 45 1e-07
ref|XP_022849896.1| SWI/SNF complex subunit SWI3C-like [Olea eur... 39 9e-07
ref|XP_010664182.1| PREDICTED: SWI/SNF complex subunit SWI3C iso... 35 1e-06
ref|XP_010664183.1| PREDICTED: SWI/SNF complex subunit SWI3C iso... 35 1e-06
ref|XP_012853287.1| PREDICTED: SWI/SNF complex subunit SWI3C [Er... 35 1e-06
emb|CBI18988.3| unnamed protein product, partial [Vitis vinifera] 35 1e-06
emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera] 35 1e-06
gb|EYU23869.1| hypothetical protein MIMGU_mgv1a0025992mg, partia... 35 1e-06
ref|XP_022863298.1| SWI/SNF complex subunit SWI3C-like isoform X... 42 3e-06
ref|XP_022863299.1| SWI/SNF complex subunit SWI3C-like isoform X... 42 3e-06
ref|XP_009803801.1| PREDICTED: SWI/SNF complex subunit SWI3C [Ni... 47 1e-05
ref|XP_019231580.1| PREDICTED: SWI/SNF complex subunit SWI3C [Ni... 47 1e-05
gb|OIT28631.1| swisnf complex subunit swi3c [Nicotiana attenuata] 47 1e-05
>ref|XP_011074832.1| SWI/SNF complex subunit SWI3C isoform X1 [Sesamum indicum]
Length = 771
Score = 49.7 bits (117), Expect(3) = 4e-11
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDA 121
SLMQ+QGMYGLGPRLPLSAIHPS +
Sbjct: 715 SLMQQQGMYGLGPRLPLSAIHPSSS 739
Score = 35.4 bits (80), Expect(3) = 4e-11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRPVSGTKSGLG
Sbjct: 757 HPMLRPVSGTKSGLG 771
Score = 29.6 bits (65), Expect(3) = 4e-11
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 4 FVSRYGNNQQIHPHVT 51
F S YGNNQ +HPH++
Sbjct: 700 FASGYGNNQPVHPHMS 715
>ref|XP_020548192.1| SWI/SNF complex subunit SWI3C isoform X2 [Sesamum indicum]
Length = 770
Score = 49.7 bits (117), Expect(3) = 4e-11
Identities = 22/25 (88%), Positives = 24/25 (96%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDA 121
SLMQ+QGMYGLGPRLPLSAIHPS +
Sbjct: 714 SLMQQQGMYGLGPRLPLSAIHPSSS 738
Score = 35.4 bits (80), Expect(3) = 4e-11
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRPVSGTKSGLG
Sbjct: 756 HPMLRPVSGTKSGLG 770
Score = 29.6 bits (65), Expect(3) = 4e-11
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 4 FVSRYGNNQQIHPHVT 51
F S YGNNQ +HPH++
Sbjct: 699 FASGYGNNQPVHPHMS 714
>ref|XP_019154827.1| PREDICTED: SWI/SNF complex subunit SWI3C [Ipomoea nil]
Length = 780
Score = 45.4 bits (106), Expect(3) = 9e-10
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = +2
Query: 53 MQRQGMYGLGPRLPLSAIHPSDA 121
M +QGMYGLGPRLPLSAIHPS A
Sbjct: 726 MPQQGMYGLGPRLPLSAIHPSSA 748
Score = 32.7 bits (73), Expect(3) = 9e-10
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHV 48
PF+S YGNNQ +HPH+
Sbjct: 708 PFISGYGNNQPLHPHM 723
Score = 32.0 bits (71), Expect(3) = 9e-10
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRP SGTK GLG
Sbjct: 766 HPMLRPASGTKPGLG 780
>gb|PIN16991.1| Chromatin remodeling factor subunit [Handroanthus impetiginosus]
Length = 770
Score = 47.8 bits (112), Expect(3) = 2e-09
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDAKT 127
SLMQ+Q MYGLGPRLPLSAIHPS + +
Sbjct: 714 SLMQQQSMYGLGPRLPLSAIHPSSSSS 740
Score = 33.5 bits (75), Expect(3) = 2e-09
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRPV GTKSGLG
Sbjct: 756 HPMLRPVPGTKSGLG 770
Score = 27.3 bits (59), Expect(3) = 2e-09
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PF +GNNQ HPHV+
Sbjct: 698 PFNPSFGNNQPSHPHVS 714
>emb|CDP10951.1| unnamed protein product [Coffea canephora]
Length = 791
Score = 39.7 bits (91), Expect(3) = 5e-08
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 50 LMQRQGMYGLGPRLPLSAIHPSDAKTGI 133
+ Q+Q MYG+GPRLPLSAI PS + +
Sbjct: 736 MSQQQSMYGIGPRLPLSAIQPSSSSPNV 763
Score = 33.9 bits (76), Expect(3) = 5e-08
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRPVSG+KSGLG
Sbjct: 777 HPMLRPVSGSKSGLG 791
Score = 30.4 bits (67), Expect(3) = 5e-08
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PF+S +G+NQ IHPH++
Sbjct: 718 PFISGFGSNQPIHPHMS 734
>ref|XP_022875895.1| SWI/SNF complex subunit SWI3C isoform X1 [Olea europaea var.
sylvestris]
Length = 771
Score = 46.2 bits (108), Expect(3) = 1e-07
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDAKTG 130
SL+Q+ GMYGLGPRLPLS++HPS +G
Sbjct: 713 SLIQQHGMYGLGPRLPLSSLHPSSPSSG 740
Score = 33.1 bits (74), Expect(3) = 1e-07
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PFVS YG+NQ IHPH++
Sbjct: 697 PFVSGYGSNQPIHPHIS 713
Score = 23.5 bits (49), Expect(3) = 1e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HP+ R +SG+KS LG
Sbjct: 757 HPIRRSLSGSKSSLG 771
>ref|XP_022875896.1| SWI/SNF complex subunit SWI3C isoform X2 [Olea europaea var.
sylvestris]
Length = 770
Score = 46.2 bits (108), Expect(3) = 1e-07
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDAKTG 130
SL+Q+ GMYGLGPRLPLS++HPS +G
Sbjct: 712 SLIQQHGMYGLGPRLPLSSLHPSSPSSG 739
Score = 33.1 bits (74), Expect(3) = 1e-07
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PFVS YG+NQ IHPH++
Sbjct: 696 PFVSGYGSNQPIHPHIS 712
Score = 23.5 bits (49), Expect(3) = 1e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HP+ R +SG+KS LG
Sbjct: 756 HPIRRSLSGSKSSLG 770
>gb|PIN17056.1| Chromatin remodeling factor subunit [Handroanthus impetiginosus]
Length = 763
Score = 45.4 bits (106), Expect(3) = 1e-07
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPS 115
SLMQ+QGMYGLGPRLPLSA+ PS
Sbjct: 708 SLMQQQGMYGLGPRLPLSALQPS 730
Score = 31.2 bits (69), Expect(3) = 1e-07
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
H MLRPVSGT+SGLG
Sbjct: 749 HSMLRPVSGTRSGLG 763
Score = 26.2 bits (56), Expect(3) = 1e-07
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PFV YGNNQ IHP ++
Sbjct: 694 PFV--YGNNQPIHPQIS 708
>ref|XP_022849896.1| SWI/SNF complex subunit SWI3C-like [Olea europaea var. sylvestris]
Length = 320
Score = 38.9 bits (89), Expect(3) = 9e-07
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 41 PTSLMQRQGMYGLGPRLPLSAIHPSDA 121
P + + +QGMY LGPRLPLSAI PS +
Sbjct: 263 PHTSLTQQGMYDLGPRLPLSAIRPSSS 289
Score = 31.6 bits (70), Expect(3) = 9e-07
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3
Query: 108 THPMLRPVSGTKSGLG 155
+HPMLRPVS TK+GLG
Sbjct: 305 SHPMLRPVSRTKTGLG 320
Score = 29.3 bits (64), Expect(3) = 9e-07
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PFVS +GNNQ ++PH +
Sbjct: 250 PFVSGFGNNQPVNPHTS 266
>ref|XP_010664182.1| PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Vitis
vinifera]
Length = 794
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDA 121
S M RQ M+ GPRLPL+AI PS +
Sbjct: 736 SFMPRQPMFSFGPRLPLAAIQPSSS 760
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPM+RPVSGT SGLG
Sbjct: 780 HPMMRPVSGTSSGLG 794
Score = 32.0 bits (71), Expect(3) = 1e-06
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
P +S YGNNQQ+HPH++
Sbjct: 720 PSISGYGNNQQMHPHMS 736
>ref|XP_010664183.1| PREDICTED: SWI/SNF complex subunit SWI3C isoform X2 [Vitis
vinifera]
Length = 779
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDA 121
S M RQ M+ GPRLPL+AI PS +
Sbjct: 721 SFMPRQPMFSFGPRLPLAAIQPSSS 745
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPM+RPVSGT SGLG
Sbjct: 765 HPMMRPVSGTSSGLG 779
Score = 32.0 bits (71), Expect(3) = 1e-06
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
P +S YGNNQQ+HPH++
Sbjct: 705 PSISGYGNNQQMHPHMS 721
>ref|XP_012853287.1| PREDICTED: SWI/SNF complex subunit SWI3C [Erythranthe guttata]
Length = 767
Score = 35.4 bits (80), Expect(3) = 1e-06
Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +2
Query: 56 QRQGMYG-LGPRLPLSAIHPSDA 121
Q+Q MY LGPRLPLSAIHPS +
Sbjct: 710 QQQAMYNSLGPRLPLSAIHPSSS 732
Score = 33.5 bits (75), Expect(3) = 1e-06
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRPVSG KSGLG
Sbjct: 753 HPMLRPVSGAKSGLG 767
Score = 30.4 bits (67), Expect(3) = 1e-06
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHV 48
P +S YGNNQ IHPH+
Sbjct: 689 PSISGYGNNQPIHPHM 704
>emb|CBI18988.3| unnamed protein product, partial [Vitis vinifera]
Length = 675
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDA 121
S M RQ M+ GPRLPL+AI PS +
Sbjct: 617 SFMPRQPMFSFGPRLPLAAIQPSSS 641
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPM+RPVSGT SGLG
Sbjct: 661 HPMMRPVSGTSSGLG 675
Score = 32.0 bits (71), Expect(3) = 1e-06
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
P +S YGNNQQ+HPH++
Sbjct: 601 PSISGYGNNQQMHPHMS 617
>emb|CAN83645.1| hypothetical protein VITISV_016194 [Vitis vinifera]
Length = 334
Score = 34.7 bits (78), Expect(3) = 1e-06
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDA 121
S M RQ M+ GPRLPL+AI PS +
Sbjct: 276 SFMPRQPMFSFGPRLPLAAIQPSSS 300
Score = 32.7 bits (73), Expect(3) = 1e-06
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPM+RPVSGT SGLG
Sbjct: 320 HPMMRPVSGTSSGLG 334
Score = 32.0 bits (71), Expect(3) = 1e-06
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
P +S YGNNQQ+HPH++
Sbjct: 260 PSISGYGNNQQMHPHMS 276
>gb|EYU23869.1| hypothetical protein MIMGU_mgv1a0025992mg, partial [Erythranthe
guttata]
Length = 263
Score = 35.4 bits (80), Expect(3) = 1e-06
Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 1/23 (4%)
Frame = +2
Query: 56 QRQGMYG-LGPRLPLSAIHPSDA 121
Q+Q MY LGPRLPLSAIHPS +
Sbjct: 206 QQQAMYNSLGPRLPLSAIHPSSS 228
Score = 33.5 bits (75), Expect(3) = 1e-06
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3
Query: 111 HPMLRPVSGTKSGLG 155
HPMLRPVSG KSGLG
Sbjct: 249 HPMLRPVSGAKSGLG 263
Score = 30.4 bits (67), Expect(3) = 1e-06
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHV 48
P +S YGNNQ IHPH+
Sbjct: 185 PSISGYGNNQPIHPHM 200
>ref|XP_022863298.1| SWI/SNF complex subunit SWI3C-like isoform X1 [Olea europaea var.
sylvestris]
Length = 216
Score = 42.0 bits (97), Expect(3) = 3e-06
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 44 TSLMQRQGMYGLGPRLPLSAIHP 112
TSL+Q+ GMYGLG RLPLSA+HP
Sbjct: 157 TSLIQQHGMYGLGQRLPLSAMHP 179
Score = 31.2 bits (69), Expect(3) = 3e-06
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PF+S YG+NQ +HPH +
Sbjct: 142 PFISGYGSNQPVHPHTS 158
Score = 24.6 bits (52), Expect(3) = 3e-06
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 108 THPMLRPVSGTKSGLG 155
+HP+ R VSG+KS LG
Sbjct: 201 SHPIPRSVSGSKSSLG 216
>ref|XP_022863299.1| SWI/SNF complex subunit SWI3C-like isoform X2 [Olea europaea var.
sylvestris]
Length = 215
Score = 42.0 bits (97), Expect(3) = 3e-06
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2
Query: 44 TSLMQRQGMYGLGPRLPLSAIHP 112
TSL+Q+ GMYGLG RLPLSA+HP
Sbjct: 156 TSLIQQHGMYGLGQRLPLSAMHP 178
Score = 31.2 bits (69), Expect(3) = 3e-06
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 1 PFVSRYGNNQQIHPHVT 51
PF+S YG+NQ +HPH +
Sbjct: 141 PFISGYGSNQPVHPHTS 157
Score = 24.6 bits (52), Expect(3) = 3e-06
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 108 THPMLRPVSGTKSGLG 155
+HP+ R VSG+KS LG
Sbjct: 200 SHPIPRSVSGSKSSLG 215
>ref|XP_009803801.1| PREDICTED: SWI/SNF complex subunit SWI3C [Nicotiana sylvestris]
Length = 790
Score = 47.0 bits (110), Expect(2) = 1e-05
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDAKTGIWD 139
S M +QGMYG GPRLPLSAIHPS + G+++
Sbjct: 735 SFMPQQGMYGFGPRLPLSAIHPSSSTPGMFN 765
Score = 30.0 bits (66), Expect(2) = 1e-05
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 4 FVSRYGNNQQIHPHVT 51
F+S YGNNQ +HPH++
Sbjct: 720 FISGYGNNQPMHPHMS 735
>ref|XP_019231580.1| PREDICTED: SWI/SNF complex subunit SWI3C [Nicotiana attenuata]
Length = 736
Score = 47.0 bits (110), Expect(2) = 1e-05
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDAKTGIWD 139
S M +QGMYG GPRLPLSAIHPS + G+++
Sbjct: 681 SFMPQQGMYGFGPRLPLSAIHPSSSTPGMFN 711
Score = 30.0 bits (66), Expect(2) = 1e-05
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 4 FVSRYGNNQQIHPHVT 51
F+S YGNNQ +HPH++
Sbjct: 666 FISGYGNNQPMHPHMS 681
>gb|OIT28631.1| swisnf complex subunit swi3c [Nicotiana attenuata]
Length = 576
Score = 47.0 bits (110), Expect(2) = 1e-05
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2
Query: 47 SLMQRQGMYGLGPRLPLSAIHPSDAKTGIWD 139
S M +QGMYG GPRLPLSAIHPS + G+++
Sbjct: 521 SFMPQQGMYGFGPRLPLSAIHPSSSTPGMFN 551
Score = 30.0 bits (66), Expect(2) = 1e-05
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +1
Query: 4 FVSRYGNNQQIHPHVT 51
F+S YGNNQ +HPH++
Sbjct: 506 FISGYGNNQPMHPHMS 521