BLASTX nr result
ID: Rehmannia30_contig00008375
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00008375
(1111 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAS86826.1| RNA polymerase II second largest subunit, partial... 676 0.0
emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata] 677 0.0
gb|AAS86833.1| RNA polymerase II second largest subunit, partial... 674 0.0
emb|CAD91516.1| RNA polymerase II second largest subunit, partia... 675 0.0
gb|AAS86830.1| RPB140, partial [Liquidambar acalycina] 671 0.0
gb|AAS86834.1| RNA polymerase II second largest subunit, partial... 669 0.0
emb|CAD88602.1| RNA polymerase II second largest subunit, partia... 667 0.0
ref|XP_022874083.1| DNA-directed RNA polymerase II subunit RPB2-... 682 0.0
gb|AJS14111.1| RNA polymerase II second largest subunit, partial... 663 0.0
emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelm... 665 0.0
gb|AAS86829.1| RNA polymerase II second largest subunit, partial... 663 0.0
emb|CAD91515.1| RNA polymerase II second largest subunit, partia... 663 0.0
gb|AJS14107.1| RNA polymerase II second largest subunit, partial... 662 0.0
emb|CAD89519.1| RNA polymerase II second largest subunit, partia... 655 0.0
gb|AJS14113.1| RNA polymerase II second largest subunit, partial... 661 0.0
gb|AJS14099.1| RNA polymerase II second largest subunit, partial... 657 0.0
ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II su... 682 0.0
gb|AFV74909.1| RNA polymerase II second largest subunit, partial... 659 0.0
emb|CAD89106.1| RNA polymerase II, second largest subunit, parti... 659 0.0
gb|AFV74906.1| RNA polymerase II second largest subunit, partial... 659 0.0
>gb|AAS86826.1| RNA polymerase II second largest subunit, partial [Antirrhinum majus]
Length = 575
Score = 676 bits (1744), Expect = 0.0
Identities = 332/369 (89%), Positives = 341/369 (92%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNG WVGIHRNPDMLVST VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPQATKIFVNGLWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKD+QALQQRESPDDGGWH+LVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQALQQRESPDDGGWHELVAKGFIEYI 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDL+SA++NP+EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLLSAKVNPTEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTR SGEDVIIGKTTPI+PD+AQGQAARYTKRDHSTSLRHSETGM
Sbjct: 334 HGSYDKLDDDGLAPPGTRCSGEDVIIGKTTPISPDDAQGQAARYTKRDHSTSLRHSETGM 393
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 394 VDQVLLTTN 402
>emb|CAD92665.1| RNA polymerase II, partial [Erythranthe guttata]
Length = 629
Score = 677 bits (1748), Expect = 0.0
Identities = 338/370 (91%), Positives = 339/370 (91%), Gaps = 1/370 (0%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVST VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGFIEYI 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
I+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYR E KKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 ISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRAEXKKMGTLVKEDFGRPDRANTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRHSETG 1079
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRHSETG
Sbjct: 334 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRHSETG 393
Query: 1080 MVDQVLLTTN 1109
MVDQVLLTTN
Sbjct: 394 MVDQVLLTTN 403
>gb|AAS86833.1| RNA polymerase II second largest subunit, partial [Rhododendron
macrophyllum]
Length = 549
Score = 674 bits (1739), Expect = 0.0
Identities = 332/369 (89%), Positives = 339/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIK+KDIQALQQRE+P+DGGWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYI 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDV+IGKTTPIA DEAQG AARYT+RDHSTSLRHSETGM
Sbjct: 334 HGSYDKLDDDGLAPPGTRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHSETGM 393
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 394 VDQVLLTTN 402
>emb|CAD91516.1| RNA polymerase II second largest subunit, partial [Garrya elliptica]
Length = 576
Score = 675 bits (1741), Expect = 0.0
Identities = 332/369 (89%), Positives = 340/369 (92%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 29 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 88
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESP+DGGWHDLVAKG
Sbjct: 89 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPEDGGWHDLVAKGFIEYI 148
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDL+SA+LNP +AYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 149 DTEEEETTMISMTINDLLSAKLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 208
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 209 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 268
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 269 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 328
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA D++QGQA+RYTKRDHSTSLRHSETGM
Sbjct: 329 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYTKRDHSTSLRHSETGM 388
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 389 VDQVLLTTN 397
>gb|AAS86830.1| RPB140, partial [Liquidambar acalycina]
Length = 540
Score = 671 bits (1730), Expect = 0.0
Identities = 329/369 (89%), Positives = 340/369 (92%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVE+QRLLIKKKDIQALQQRE+PDDGGWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVERQRLLIKKKDIQALQQRETPDDGGWHDLVAKGFIEYV 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+RA+TMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRADTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSY+KLDDDGLAPPGTRVSGEDVIIGKTTPIA DE+QGQA+RYT+RDHSTSLRHSETGM
Sbjct: 334 HGSYEKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDESQGQASRYTRRDHSTSLRHSETGM 393
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 394 VDQVLLTTN 402
>gb|AAS86834.1| RNA polymerase II second largest subunit, partial [Camellia japonica]
Length = 559
Score = 669 bits (1725), Expect = 0.0
Identities = 329/369 (89%), Positives = 338/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 53 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 112
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ+LQQRE+P+DGGWHDLVAKG
Sbjct: 113 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQSLQQRETPEDGGWHDLVAKGYIEYI 172
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDL++ARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 173 DTEEEETTMISMTINDLITARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 232
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 233 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 292
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFG PDRANTMGMR
Sbjct: 293 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGCPDRANTMGMR 352
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA ++AQG AARYTKRDHSTSLRHSETGM
Sbjct: 353 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQEDAQGPAARYTKRDHSTSLRHSETGM 412
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 413 VDQVLLTTN 421
>emb|CAD88602.1| RNA polymerase II second largest subunit, partial [Alangium
platanifolium]
Length = 540
Score = 667 bits (1722), Expect = 0.0
Identities = 327/369 (88%), Positives = 339/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+P++GGWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQMLQQRETPEEGGWHDLVAKGFIEYI 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSAR+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA D++QGQA+RY++RDHSTSLRHSETG+
Sbjct: 334 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYSRRDHSTSLRHSETGI 393
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 394 VDQVLLTTN 402
>ref|XP_022874083.1| DNA-directed RNA polymerase II subunit RPB2-like [Olea europaea var.
sylvestris]
Length = 972
Score = 682 bits (1761), Expect = 0.0
Identities = 337/369 (91%), Positives = 340/369 (92%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 548 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 607
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPD+GGWHDLVAKG
Sbjct: 608 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDEGGWHDLVAKGFIEYI 667
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 668 DTEEEETTMISMTINDLVSARLNPKEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 727
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 728 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 787
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMR
Sbjct: 788 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMR 847
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPD+AQGQAARYTKRDHSTSLRHSETGM
Sbjct: 848 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDDAQGQAARYTKRDHSTSLRHSETGM 907
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 908 VDQVLLTTN 916
>gb|AJS14111.1| RNA polymerase II second largest subunit, partial [Lepionurus
sylvestris]
Length = 490
Score = 663 bits (1710), Expect = 0.0
Identities = 326/369 (88%), Positives = 338/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVG+HR+PDMLV T VDVNTEVGVVRD
Sbjct: 28 EEWGTENFEEISPAVIPQATKIFVNGCWVGVHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRES ++GGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESAEEGGWHDLVAKGYIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLV+ARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DE+QGQA+RYTKRDHSTSLRHSETG+
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDESQGQASRYTKRDHSTSLRHSETGI 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396
>emb|CAD92460.1| RNA polymerase II, partial [Escallonia sp. Oxelman 2340]
Length = 543
Score = 665 bits (1715), Expect = 0.0
Identities = 327/369 (88%), Positives = 336/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIP ATKIFVNGCWVGIHR+PDMLV T DVNTEVGVVRD
Sbjct: 28 EEWGTENFEEISPAVIPPATKIFVNGCWVGIHRDPDMLVRTLRKLRRRXDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIV KQRLLIKK DIQALQQRE+P+DGGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVNKQRLLIKKADIQALQQRETPEDGGWHDLVAKGYIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA D+AQGQA+RY+KRDHSTSLRHSETGM
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQASRYSKRDHSTSLRHSETGM 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396
>gb|AAS86829.1| RNA polymerase II second largest subunit, partial [Astilbe chinensis]
Length = 540
Score = 663 bits (1711), Expect = 0.0
Identities = 327/369 (88%), Positives = 337/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIP+ATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPEATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+P+DGGWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETPEDGGWHDLVAKGFIEYV 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+ YTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSEYYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TM MR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRNDTMNMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DE+QGQA+RYTKRDHSTSLRHSETGM
Sbjct: 334 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDESQGQASRYTKRDHSTSLRHSETGM 393
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 394 VDQVLLTTN 402
>emb|CAD91515.1| RNA polymerase II second largest subunit, partial [Hedera helix]
Length = 541
Score = 663 bits (1710), Expect = 0.0
Identities = 328/370 (88%), Positives = 338/370 (91%), Gaps = 1/370 (0%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVI QATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVITQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIV+ QRLLI+KKDIQALQQRESP+DGGWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVKNQRLLIRKKDIQALQQRESPEDGGWHDLVAKGFIEYI 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDL+SAR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLLSARVNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTN+QFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNFQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRS+FFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSIDRGFFRSIFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAA-RYTKRDHSTSLRHSETG 1079
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA D+AQGQAA RYT+RDHSTSLRHSETG
Sbjct: 334 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDAQGQAASRYTRRDHSTSLRHSETG 393
Query: 1080 MVDQVLLTTN 1109
MVDQVLLTTN
Sbjct: 394 MVDQVLLTTN 403
>gb|AJS14107.1| RNA polymerase II second largest subunit, partial [Exocarpos
cupressiformis]
Length = 569
Score = 662 bits (1708), Expect = 0.0
Identities = 326/369 (88%), Positives = 338/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQ+TKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 28 EEWGTENFEEISPAVIPQSTKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRE+ ++GGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRETAEEGGWHDLVAKGFIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DE+QGQA+RYTKRDHSTSLRHSETG+
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDESQGQASRYTKRDHSTSLRHSETGI 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396
>emb|CAD89519.1| RNA polymerase II second largest subunit, partial [Davidia
involucrata]
Length = 396
Score = 655 bits (1690), Expect = 0.0
Identities = 321/363 (88%), Positives = 332/363 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 34 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 93
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQR++P++ GWHDLVAKG
Sbjct: 94 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRKTPEEVGWHDLVAKGFIEYI 153
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 154 DTEEEETTMISMTINDLVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 213
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 214 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 273
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSS+DRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 274 IACYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 333
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA D++QGQA+RYTKRDHSTSLRHSETG+
Sbjct: 334 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDDSQGQASRYTKRDHSTSLRHSETGI 393
Query: 1083 VDQ 1091
VDQ
Sbjct: 394 VDQ 396
>gb|AJS14113.1| RNA polymerase II second largest subunit, partial [Maburea trinervis]
Length = 569
Score = 661 bits (1705), Expect = 0.0
Identities = 325/369 (88%), Positives = 337/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 28 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+ ++GGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQMLQQRETAEEGGWHDLVAKGFIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLV+ARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVTARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRTDTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIA DE+QGQA+RYT+RDHSTSLRHSETG+
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAQDESQGQASRYTRRDHSTSLRHSETGI 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396
>gb|AJS14099.1| RNA polymerase II second largest subunit, partial [Arjona tuberosa]
Length = 490
Score = 657 bits (1696), Expect = 0.0
Identities = 323/369 (87%), Positives = 336/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
+EWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 28 DEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKK+DIQ LQQRE+ ++GGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKRDIQILQQRETAEEGGWHDLVAKGFIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
+DLVSARLNP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTISDLVSARLNPGEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVS 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DE+QGQA RYTKRDHSTSLRHSETGM
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDESQGQATRYTKRDHSTSLRHSETGM 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396
>ref|XP_012830376.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Erythranthe
guttata]
gb|EYU43393.1| hypothetical protein MIMGU_mgv1a000385mg [Erythranthe guttata]
Length = 1197
Score = 682 bits (1760), Expect = 0.0
Identities = 339/370 (91%), Positives = 341/370 (92%), Gaps = 1/370 (0%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVST VDVNTEVGVVRD
Sbjct: 554 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTLRRLRRRVDVNTEVGVVRD 613
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKG
Sbjct: 614 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGFIEYI 673
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSAR+NP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 674 DTEEEETTMISMTINDLVSARINPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 733
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 734 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 793
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
I+CYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR
Sbjct: 794 ISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 853
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQA-ARYTKRDHSTSLRHSETG 1079
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI PDEAQGQA ARYTKRDHSTSLRHSETG
Sbjct: 854 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPITPDEAQGQANARYTKRDHSTSLRHSETG 913
Query: 1080 MVDQVLLTTN 1109
MVDQVLLTTN
Sbjct: 914 MVDQVLLTTN 923
>gb|AFV74909.1| RNA polymerase II second largest subunit, partial [Balanophora
laxiflora]
Length = 569
Score = 659 bits (1701), Expect = 0.0
Identities = 323/369 (87%), Positives = 336/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIP ATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 28 EEWGTENFEEISPAVIPTATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEK+RLLIKKKDIQALQQRESPD+GGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVEKKRLLIKKKDIQALQQRESPDEGGWHDLVAKGFIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVS R+NP EAYS+TYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSGRINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQ+RMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQYRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRA+TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRADTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PI D+ QGQA+RYT++DHSTSLRHSETG+
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPITQDDNQGQASRYTRQDHSTSLRHSETGI 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396
>emb|CAD89106.1| RNA polymerase II, second largest subunit, partial [Tephrosia
purpurea]
Length = 550
Score = 659 bits (1699), Expect = 0.0
Identities = 323/369 (87%), Positives = 336/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCW+GIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 33 EEWGTENFEEISPAVIPQATKIFVNGCWLGIHRDPDMLVKTLRNLRRRVDVNTEVGVVRD 92
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI ALQQRESP++GGWHDLV+KG
Sbjct: 93 IRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIIALQQRESPEEGGWHDLVSKGFIEYI 152
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDL+ ARLNP EAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 153 DTEEEETTMISMTINDLIQARLNPGEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 212
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 213 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 272
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDF RPDR+NTMGMR
Sbjct: 273 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFCRPDRSNTMGMR 332
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPI+ +EAQGQA+RYT+RDHS SLRHSETG+
Sbjct: 333 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQEEAQGQASRYTRRDHSISLRHSETGI 392
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 393 VDQVLLTTN 401
>gb|AFV74906.1| RNA polymerase II second largest subunit, partial [Thesium chinense]
Length = 566
Score = 659 bits (1699), Expect = 0.0
Identities = 324/369 (87%), Positives = 336/369 (91%)
Frame = +3
Query: 3 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNPDMLVSTXXXXXXXVDVNTEVGVVRD 182
EEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+PDMLV T VDVNTEVGVVRD
Sbjct: 28 EEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRD 87
Query: 183 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQALQQRESPDDGGWHDLVAKGXXXXX 362
IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQ LQQRE+ ++GGWHDLVAKG
Sbjct: 88 IRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIQVLQQRETAEEGGWHDLVAKGFIEYI 147
Query: 363 XXXXXXXXXXXXXXNDLVSARLNPSEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPR 542
NDLVSARLNP EAYS+ YTHCEIHPSLILGVCASIIPFPDHNQSPR
Sbjct: 148 DTEEEETTMISMTINDLVSARLNPEEAYSEAYTHCEIHPSLILGVCASIIPFPDHNQSPR 207
Query: 543 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 722
NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA
Sbjct: 208 NTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVA 267
Query: 723 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMR 902
IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP+R +TMGMR
Sbjct: 268 IACYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPNRMDTMGMR 327
Query: 903 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPIAPDEAQGQAARYTKRDHSTSLRHSETGM 1082
HGSYDKLDDDGLAPPGTRVSGEDVIIGKT+PIA DE+QGQ++RYTKRDHSTSLRHSETG+
Sbjct: 328 HGSYDKLDDDGLAPPGTRVSGEDVIIGKTSPIAQDESQGQSSRYTKRDHSTSLRHSETGI 387
Query: 1083 VDQVLLTTN 1109
VDQVLLTTN
Sbjct: 388 VDQVLLTTN 396