BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00007285
         (2323 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposo...   976   0.0  
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   971   0.0  
gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposo...   964   0.0  
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   944   0.0  
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   931   0.0  
gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposo...   931   0.0  
gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposo...   880   0.0  
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo...   893   0.0  
gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposo...   879   0.0  
dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subte...   872   0.0  
emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]   852   0.0  
gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposo...   865   0.0  
gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposo...   851   0.0  
gb|ABW74566.1| integrase [Boechera divaricarpa]                       855   0.0  
gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposo...   856   0.0  
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   880   0.0  
gb|KYP46287.1| Retrovirus-related Pol polyprotein from transposo...   836   0.0  
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa]                        854   0.0  
gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposo...   848   0.0  
emb|CAN74767.1| hypothetical protein VITISV_041860, partial [Vit...   866   0.0  

>gb|KYP65915.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 690

 Score =  976 bits (2522), Expect = 0.0
 Identities = 483/698 (69%), Positives = 572/698 (81%)
 Frame = +1

Query: 208  METARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFG 387
            ME ARSML EKGLP +FWAEAV TAVY+LNRCPTKA++DKT +EAWS  KPSAKHLRVFG
Sbjct: 1    MEMARSMLKEKGLPNTFWAEAVYTAVYILNRCPTKAIKDKTSIEAWSGIKPSAKHLRVFG 60

Query: 388  CICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNW 567
             ICY+H+P++KR KL++KT + IFLGYSTQSKGY+VY+L T+KLIIS     DE+ A+NW
Sbjct: 61   SICYIHVPEEKRHKLEDKTVRGIFLGYSTQSKGYQVYNLQTKKLIIS-----DENVAWNW 115

Query: 568  ETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRSLREIYQTCN 747
               +VEK +I++  +   +EET+  P E    +                RSL +IY+TCN
Sbjct: 116  NDEKVEK-NIHI-SIQQPEEETTEVPGEL--HSPPQQQTPSPKSTPRRVRSLEDIYETCN 171

Query: 748  LTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVKWVYKTKLNPD 927
            L I+EP+S+EAA+KQ+VWVKA          N TW+L D P+DK+ IGVKWVYKTKLNPD
Sbjct: 172  LAILEPESFEAASKQQVWVKAMEEEIKMIEKNNTWDLVDYPKDKDIIGVKWVYKTKLNPD 231

Query: 928  GSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFL 1107
            G++QK+KARLVAKGY+QQ G+DY+ETFAPVARLDTIRALIALAA+K W I+QLDVK AFL
Sbjct: 232  GTIQKHKARLVAKGYSQQPGVDYNETFAPVARLDTIRALIALAAEKGWNIFQLDVKSAFL 291

Query: 1108 NGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQS 1287
            NG L+EEIYVEQPQGF+ +G EDKVLRL+KALYGLKQAPRAWYSRID YFT+ GFRRS+S
Sbjct: 292  NGVLQEEIYVEQPQGFISKGNEDKVLRLRKALYGLKQAPRAWYSRIDQYFTDHGFRRSKS 351

Query: 1288 EPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIE 1467
            EPTLYIKTQG  +TLIVSLYVDDLI+TGNN  M+ EFKEDMMKTFEMTDLGLM+YFLGIE
Sbjct: 352  EPTLYIKTQGQYDTLIVSLYVDDLIYTGNNMKMMTEFKEDMMKTFEMTDLGLMNYFLGIE 411

Query: 1468 IHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKADNSQFRSLIG 1647
            + Q+K GIFI QKKY E+LLK+FKM GCKTV TPL   + L+K+DG+P AD S++RSLIG
Sbjct: 412  VSQKKKGIFICQKKYTEALLKKFKMSGCKTVTTPLVTKEKLQKDDGAPDADASRYRSLIG 471

Query: 1648 SLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLI 1827
            SLLYLTATRPDI YA S LSRFMQ PSQIH+GAAKR+LRYL+GTK +GIWY+ +TNS L+
Sbjct: 472  SLLYLTATRPDITYAVSLLSRFMQKPSQIHFGAAKRILRYLQGTKEFGIWYKTMTNSSLL 531

Query: 1828 GYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIW 2007
            GYTD D AGS+DDMKSTSGYAF+LGS IFSWASKK ATVAQS+AEAEY+AAA  TSQAIW
Sbjct: 532  GYTDCDLAGSVDDMKSTSGYAFSLGSGIFSWASKKHATVAQSTAEAEYVAAAEATSQAIW 591

Query: 2008 LKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELE 2187
            L+RIL +M E Q+  T I+CD+KS IAM KNP  H+RTKHI IKYHFI+E E   +I++E
Sbjct: 592  LRRILAEMREQQDGPTTIYCDNKSTIAMTKNPKHHSRTKHIAIKYHFIKEVETTKKIKME 651

Query: 2188 HCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
            +CKT+EQ+AD+FTKALPR +FE  R MIGV EIC KEE
Sbjct: 652  YCKTEEQVADVFTKALPRTRFEQFRTMIGVKEICIKEE 689


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  971 bits (2511), Expect = 0.0
 Identities = 480/787 (60%), Positives = 598/787 (75%), Gaps = 20/787 (2%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            +VF IFKKFK++VEKQSG  IKT+RSDRG EYTS+QF  FCEDEGVE QLTV Y P+QNG
Sbjct: 635  EVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEYTSSQFGNFCEDEGVERQLTVAYTPQQNG 694

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            V ERKN+TVME A++ML EKGLPK FWAEAV+TAVYLLNRCPTKA+ +KTP+EAWS RKP
Sbjct: 695  VVERKNQTVMEMAKAMLYEKGLPKIFWAEAVNTAVYLLNRCPTKALLNKTPIEAWSGRKP 754

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
            S +H +VFGC+CY  +P+Q+RSKLDE +EKCIF+GYS+QSKGYR+Y+L T KLIISRDV+
Sbjct: 755  SVRHFKVFGCLCYSQVPKQRRSKLDETSEKCIFMGYSSQSKGYRLYNLKTXKLIISRDVI 814

Query: 541  FDEDAAYNWETNQVEKRSINLPKL--------------THEQEETSNDPPETPERAXXXX 678
            FDE  A+NWE  ++ K++I + +L              T   +E+    P +P       
Sbjct: 815  FDEKVAWNWEEGKILKKTILVDELQTKAPVETGNGSTSTSSPQESPRSVPLSPSIESPTS 874

Query: 679  XXXXXXXXXXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWEL 858
                        RSL ++Y+ CNL I+EP S+E A K E W KA          NETW+L
Sbjct: 875  XSSSPSSTPRKMRSLTDVYERCNLCIVEPQSFEEAIKDEDWRKAMEKEIDVIEKNETWQL 934

Query: 859  TDLPQDKEAIGVKWVYKTK------LNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVA 1020
             + P+DKE IGVKW+++ K       + DG VQ+ KARLVAKGY+QQ G D+ ETFAPVA
Sbjct: 935  VEKPKDKEIIGVKWIFRVKWIFRXKYHSDGRVQRLKARLVAKGYSQQPGXDFHETFAPVA 994

Query: 1021 RLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKA 1200
            RLDTIR +IA+AAQK W +YQLD+K AFLNG LE EIYVEQPQGFVV G+E+KV +LKKA
Sbjct: 995  RLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKLEXEIYVEQPQGFVVDGEENKVYKLKKA 1054

Query: 1201 LYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNE 1380
            LYGLKQAPRAWY++ID YF E GF RS+SEPTLY+K++  +  LIV+LYVDDLIFTGN+E
Sbjct: 1055 LYGLKQAPRAWYTQIDSYFIENGFIRSKSEPTLYVKSKDNSQILIVALYVDDLIFTGNDE 1114

Query: 1381 NMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTV 1560
             M+ +F+ +MMK +EM+D+GL+HYFLGIE++Q +DG+FI QK+Y E +LK+F M GC  V
Sbjct: 1115 KMVEKFRNEMMKKYEMSDMGLLHYFLGIEVYQEEDGVFICQKRYVEHILKKFGMAGCNXV 1174

Query: 1561 ATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHY 1740
            +TPL  N+ L+KEDG    D + FRSL+G+LLYLTATRPDIM+A S LSRFM  PS +H 
Sbjct: 1175 STPLVVNEKLRKEDGGKMVDETHFRSLVGNLLYLTATRPDIMFAASLLSRFMHYPSHLHL 1234

Query: 1741 GAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSW 1920
            GAAKRVLRYL+GT   GI Y      KLIG+ DSDW G IDDMKSTSGYAF+LGS + SW
Sbjct: 1235 GAAKRVLRYLQGTVELGIKYFRNIEVKLIGHCDSDWGGCIDDMKSTSGYAFSLGSGVISW 1294

Query: 1921 ASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKN 2100
             SKKQ +VAQSSAEAEYI+A++ TSQAIWL+RILED+ E Q +AT + CD+KSAIA+AKN
Sbjct: 1295 VSKKQGSVAQSSAEAEYISASLATSQAIWLRRILEDIKEKQNEATYLLCDNKSAIAIAKN 1354

Query: 2101 PVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVT 2280
             VFH+RT+HI +KYHFI+E  ++ E++L +CK++EQ ADIFTKALP  K    R ++GV 
Sbjct: 1355 XVFHSRTRHIAVKYHFIKEVISDGEVQLMYCKSEEQXADIFTKALPLEKLVHFRKLLGVE 1414

Query: 2281 EICTKEE 2301
            E+  + E
Sbjct: 1415 ELHIRGE 1421


>gb|KYP58378.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 703

 Score =  964 bits (2493), Expect = 0.0
 Identities = 480/703 (68%), Positives = 565/703 (80%), Gaps = 5/703 (0%)
 Frame = +1

Query: 208  METARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAKHLRVFG 387
            ME ARSML EKGLP +FWAEAV TAVYLLNR PTKAV+DKTP+EAWS +KPSAKHLR+FG
Sbjct: 1    MEMARSMLKEKGLPNTFWAEAVYTAVYLLNRRPTKAVRDKTPIEAWSGKKPSAKHLRIFG 60

Query: 388  CICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDEDAAYNW 567
             ICY+H+P +KR KL++KT + IFLGY +QSKGYRVY+L T+KL ISRD+  DE+A +NW
Sbjct: 61   SICYIHVPDEKRHKLEDKTVRGIFLGYISQSKGYRVYNLQTKKLTISRDIEVDENATWNW 120

Query: 568  ETNQVEKRSINLP---KLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXR--SLREI 732
            E  ++EK++I +P     T   E+ + D   +PE +                R  SL +I
Sbjct: 121  EEERIEKKTIYMPINQPTTSSLEDNNQDIVISPESSIIVPLQEESSPESTPRRVRSLVDI 180

Query: 733  YQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVKWVYKT 912
            Y+T NL I+EP S+E A  QEVWVKA          N TWEL D P  K+ IGVKWVYKT
Sbjct: 181  YETYNLAILEPGSFEEATNQEVWVKAMEEEIKMIEKNNTWELVDCPHGKDIIGVKWVYKT 240

Query: 913  KLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQLDV 1092
            KLN DG++QK+KARLVAKGY QQ G+DY+ETFAPVARL+TIRALIALAA K W IYQL+V
Sbjct: 241  KLNLDGTIQKHKARLVAKGYLQQPGVDYNETFAPVARLETIRALIALAAHKGWNIYQLNV 300

Query: 1093 KFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTELGF 1272
            K AFLNG LEEEIYVEQP GFV++G E KVLRLKKA YGLKQAPRAWY +ID YFT+ GF
Sbjct: 301  KSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKASYGLKQAPRAWYRKIDQYFTDHGF 360

Query: 1273 RRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHY 1452
            RRS+SEPTLYIKTQG  +TL++SLYVDDLI+TG N NM+MEFK+DMMKTFEMTDLGLM Y
Sbjct: 361  RRSKSEPTLYIKTQG-QHTLLLSLYVDDLIYTGTNTNMMMEFKKDMMKTFEMTDLGLMSY 419

Query: 1453 FLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKADNSQF 1632
            FLGIE+ QR DGIFI +KKY E+LLK+F M GCK V+TPL  N+ L+K DG+P+AD SQ+
Sbjct: 420  FLGIEVSQRNDGIFILKKKYTEALLKKFNMYGCKPVSTPLVTNEKLQKVDGAPEADASQY 479

Query: 1633 RSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYEPVT 1812
            RSL+GSLLYLTA RPDIM+ATS LSRFMQ PSQIHYG  KR+LRYL+GT+ +GIWY+ +T
Sbjct: 480  RSLVGSLLYLTAIRPDIMFATSLLSRFMQKPSQIHYGTGKRILRYLQGTREFGIWYKTMT 539

Query: 1813 NSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIAAAMTT 1992
             S++IGYTDSDWAGSIDDMKSTSGYAF+LGS  FSWASKKQ TVAQS+ EAEYIAAA TT
Sbjct: 540  KSRMIGYTDSDWAGSIDDMKSTSGYAFSLGSRFFSWASKKQPTVAQSTVEAEYIAAAETT 599

Query: 1993 SQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEANS 2172
            SQAIWL+RILE+M E Q+  T I+CD+KSAI MAKNPV H RTKHI IKYHFIREAE   
Sbjct: 600  SQAIWLRRILEEMSEQQDGPTIIYCDNKSAITMAKNPVHHQRTKHIAIKYHFIREAETTK 659

Query: 2173 EIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
            +I+LE+  T++Q+A+IFTKALPR KFE LR M+G+TEIC KEE
Sbjct: 660  QIQLEYYSTEDQVAEIFTKALPRAKFEQLRTMLGITEICIKEE 702


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  944 bits (2440), Expect = 0.0
 Identities = 465/788 (59%), Positives = 589/788 (74%), Gaps = 32/788 (4%)
 Frame = +1

Query: 10   DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 189
            +IFKKFKA VE QS  KIK +RSD+G EY S +F K+CE+ G+  QLT GY+ +QNGV+E
Sbjct: 353  EIFKKFKAMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTAGYSTQQNGVAE 412

Query: 190  RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 369
            RKNRT+ + A SML +KG+PKSFWAEAV+TA+Y+LNR PTKAV ++TP EAW  +KP   
Sbjct: 413  RKNRTINDMANSMLQDKGMPKSFWAEAVNTAIYILNRSPTKAVPNRTPFEAWYGKKPVIG 472

Query: 370  HLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 549
            H+RVFGCICY  +P QKR K D K+++CIF+GY+   KGYR+Y+L  +K+II RDV+FDE
Sbjct: 473  HMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIIIRDVIFDE 532

Query: 550  DAAYNWETNQVEKR--------SINLPKL--THEQEETSNDPP----------------- 648
             A +NW++ +            ++  P +  THE E+ +  P                  
Sbjct: 533  SATWNWKSPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPS 592

Query: 649  -----ETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAX 813
                  TPE A                +   E ++ CN +++EP S++ A K + W+KA 
Sbjct: 593  SEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAM 652

Query: 814  XXXXXXXXXNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGID 993
                     N TWEL D P+D+E IGVKWVYKTKLN DGSVQKYKARLVAKG+ Q+ GID
Sbjct: 653  EDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNLDGSVQKYKARLVAKGFKQKPGID 712

Query: 994  YSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKE 1173
            Y ET+APVARL+TIR +IALAAQK+WKIYQLDVK AFLNGYL+EEIYVEQP+GF VQG E
Sbjct: 713  YYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGE 772

Query: 1174 DKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVD 1353
            +KV RLKKALYGLKQAPR WYS+ID YF + GF +S SEPTLY+   GT+  LIVSLYVD
Sbjct: 773  NKVFRLKKALYGLKQAPRVWYSQIDKYFIQKGFAKSISEPTLYVNKTGTD-ILIVSLYVD 831

Query: 1354 DLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKR 1533
            DLI+TGN+E M+ +FK+DMM T+EM+DLGL++YFLG+E+HQ  +GIFISQ+KYAE++LK+
Sbjct: 832  DLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLYYFLGMEVHQSDEGIFISQRKYAENILKK 891

Query: 1534 FKMEGCKTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRF 1713
            FKM+ CK+V TPL  N+  K  DG+ K D + +RSL+GSLLYLTATRPDIM+A S LSR+
Sbjct: 892  FKMDNCKSVTTPLLPNEKQKARDGADKVDPTIYRSLVGSLLYLTATRPDIMFAASLLSRY 951

Query: 1714 MQNPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAF 1893
            M +PSQ+++ AAKRVLRY++GT +YGIWY+PV  SKLIGYTDSDWAG +DDMK TSGYAF
Sbjct: 952  MSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKGTSGYAF 1011

Query: 1894 TLGSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDS 2073
            +LGS + SW++KKQ  VA SSAEAEY+AA+   SQ +WL+RI+ED+GE Q + T I+CDS
Sbjct: 1012 SLGSGMCSWSTKKQNIVALSSAEAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDS 1071

Query: 2074 KSAIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFE 2253
            KSAIA+++NPV H+RTKHI IKYH+IREA    E++LE C+TDEQLADIFTKAL + KF 
Sbjct: 1072 KSAIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFV 1131

Query: 2254 ILRDMIGV 2277
              R++IGV
Sbjct: 1132 RDRELIGV 1139


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1335

 Score =  931 bits (2407), Expect = 0.0
 Identities = 462/788 (58%), Positives = 582/788 (73%), Gaps = 32/788 (4%)
 Frame = +1

Query: 10   DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 189
            +IFKKFKA VE QS  KIK +RSD+G+EY S +F K+CE+ G+  QLT GY+ +QNGV+E
Sbjct: 563  EIFKKFKAMVENQSNRKIKVLRSDQGREYISKEFEKYCENAGIRRQLTAGYSAQQNGVAE 622

Query: 190  RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 369
            RKNRT+ + A SML +KG+PKSFWAEAV+TAVY+LNR PTKAV ++TP EAW  +KP   
Sbjct: 623  RKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVTNRTPFEAWYGKKPVIG 682

Query: 370  HLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 549
            H+RVFGCICY  +P QKR K D K+++CIF+GY+   KGYR+Y+L  +K+IISRD +FDE
Sbjct: 683  HMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGYADGIKGYRLYNLEKKKIIISRDAIFDE 742

Query: 550  DAAYNWETNQVEKR--------SINLPKL--THEQEETSNDPP----------------- 648
             A +NW++ +            ++  P +  THE E+ +  P                  
Sbjct: 743  SATWNWKSPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPS 802

Query: 649  -----ETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAX 813
                  TPE A                +   E ++ CN +++EP S++ A K + W+KA 
Sbjct: 803  SEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAM 862

Query: 814  XXXXXXXXXNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGID 993
                     N TWEL D P+D+E IGVKWVYKTKLNPDGSVQKYKARLVAKG+ Q+ GID
Sbjct: 863  EDEIHMIEKNNTWELVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGID 922

Query: 994  YSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKE 1173
            Y ET+APVARL+TIR +IALAAQK+WKIYQLDVK AFLNGYL+EEIYVEQP+GF VQG E
Sbjct: 923  YYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEGFSVQGGE 982

Query: 1174 DKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVD 1353
            +KV RLKKALYGLKQAPRAWYS+ID YF + GF +S SEPTLY+   GT+  LIVSLYVD
Sbjct: 983  NKVFRLKKALYGLKQAPRAWYSQIDKYFIQKGFAKSISEPTLYVNKTGTD-ILIVSLYVD 1041

Query: 1354 DLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKR 1533
            DLI+TGN+E M+ +FK+DMM T+EM+DLGL+HYFLG+E+HQ  +GIFISQ+KYAE++LK+
Sbjct: 1042 DLIYTGNSEKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKK 1101

Query: 1534 FKMEGCKTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRF 1713
            FKM+ CK+V TPL  N+  K  DG+ KAD + +RSL+GSLLYLTATRPDIM+A S LSR+
Sbjct: 1102 FKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRY 1161

Query: 1714 MQNPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAF 1893
            M +PSQ+++ AAKRVLRY++GT +YGIWY+PV  SKLIGYTDSDWAG +DDMKSTSGYAF
Sbjct: 1162 MSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAF 1221

Query: 1894 TLGSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDS 2073
            +LG                 SAEAEY+AA+   SQ +WL+RI+ED+GE Q + T I+CDS
Sbjct: 1222 SLG-----------------SAEAEYVAASKAVSQVVWLRRIMEDLGEKQYQPTTIYCDS 1264

Query: 2074 KSAIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFE 2253
            KSAIA+++NPV H+RTKHI IKYH+IREA    E++LE C+TDEQLADIFTKAL + KF 
Sbjct: 1265 KSAIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFV 1324

Query: 2254 ILRDMIGV 2277
              R++IGV
Sbjct: 1325 RDRELIGV 1332


>gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1262

 Score =  931 bits (2406), Expect = 0.0
 Identities = 454/767 (59%), Positives = 578/767 (75%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            +VF +FKKFKA VE QSG  +K +R+D GKEYTST+F  FC+D GVEHQLTV Y+P+QNG
Sbjct: 510  EVFSVFKKFKALVEAQSGFLLKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNG 569

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            V+ERKNR+V+E AR M+ EK LPKSFWAEA++TAVYL NR PT+A++  TPVEAW   KP
Sbjct: 570  VAERKNRSVLEMARCMIFEKKLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAWGGIKP 629

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
            S +HL+VFG +CY H+P  KRSKLDE+ E+ I +GYS++SKGY+VY + + K+ +SRD+ 
Sbjct: 630  SVRHLKVFGSLCYTHVPAVKRSKLDERAERGILIGYSSKSKGYKVYGIDSGKVSVSRDIK 689

Query: 541  FDEDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRS 720
             DEDA +NWET Q+E+  + LP      E+   D  +                     R 
Sbjct: 690  VDEDAYWNWETCQMERHLV-LPTFESTIEDQEEDIDDD--------------FAIRGTRH 734

Query: 721  LREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVKW 900
            L EIYQ CN+ ++EP ++E A+K + W +A          N+TW+L D P+DK  IGVKW
Sbjct: 735  LSEIYQRCNVVVLEPTNFEEASKVDEWNQAMKEEMTTIEDNKTWQLVDKPKDKNVIGVKW 794

Query: 901  VYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIY 1080
            VY+TKLNPD S+ KYKA LV KGY QQ GIDY+ETFAPVAR+DTIR L+ALAAQ +W+I+
Sbjct: 795  VYRTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFAPVARMDTIRILLALAAQMKWEIW 854

Query: 1081 QLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFT 1260
             LDVK AFLNG L EEIYV QP+GFVV+G EDKV +L KALYGLKQAPRAWYSRID YF 
Sbjct: 855  HLDVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFC 914

Query: 1261 ELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLG 1440
              GFRRS+++ TLY+K      +LI+SLYVDDL+ T NN+  + +  E+M   F+M++LG
Sbjct: 915  SQGFRRSENDATLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLG 974

Query: 1441 LMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 1620
             M+YFLG+E+HQ KDGIF++Q+KYA  +LK++KME CK V TPL  N  L KEDG+ K +
Sbjct: 975  KMNYFLGLEVHQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAGKVN 1034

Query: 1621 NSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWY 1800
             S +RSL+GSLLYLT++RPD+MYA S LSRFMQ+PS+IH+ A KRVLRYL+GT  +GIWY
Sbjct: 1035 VSLYRSLVGSLLYLTSSRPDLMYAASLLSRFMQSPSEIHFAATKRVLRYLKGTTQFGIWY 1094

Query: 1801 EPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIAA 1980
            +P  N  LIGY DSDWAG+IDDMKST+GY F+LGS +FSW SKKQ  VAQS+AEAEY+A 
Sbjct: 1095 KPRKNGSLIGYVDSDWAGNIDDMKSTTGYVFSLGSGMFSWNSKKQEIVAQSTAEAEYVAG 1154

Query: 1981 AMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREA 2160
            A   +QAIWL++IL D+G  Q +AT+I+CDSKSAIA+A+NPV H +TKHI++K+H IREA
Sbjct: 1155 AAAANQAIWLRKILLDLGAEQLEATEIYCDSKSAIAIAENPVQHGKTKHIQVKFHVIREA 1214

Query: 2161 EANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
              N EI+L HC +D Q+ADI TKALP+ +FE LR++IGV+    KEE
Sbjct: 1215 VKNHEIKLIHCCSDLQVADILTKALPKARFERLRELIGVSIKNFKEE 1261


>gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 723

 Score =  880 bits (2273), Expect = 0.0
 Identities = 427/720 (59%), Positives = 540/720 (75%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            +VF +FKKFKA VE QSG  +K +R+D GKEYTST+F  FC+D GVEHQLTV Y+P+QNG
Sbjct: 12   EVFSVFKKFKALVEAQSGFLLKKLRTDNGKEYTSTEFNIFCDDLGVEHQLTVSYSPQQNG 71

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            V+ERKNR+V+E AR M+ EK LPKSFWAEA++TAVYL NR PT+A++  TPVEAW   KP
Sbjct: 72   VAERKNRSVLEMARCMIFEKKLPKSFWAEAINTAVYLQNRLPTRAIKGMTPVEAWGGIKP 131

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
            S +HL+VFG +CY H+P  KRSKLDE+ EK I +GYS++SKGY+VY + + K+ +SRD+ 
Sbjct: 132  SVRHLKVFGSLCYTHVPAVKRSKLDERAEKGILIGYSSKSKGYKVYGIDSGKVSVSRDIK 191

Query: 541  FDEDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRS 720
             DEDA +NWET Q+E+ S+ LP      E+   D  +                     R 
Sbjct: 192  VDEDAYWNWETCQMERHSV-LPTFESTIEDQEEDIDDD--------------FAIRGTRR 236

Query: 721  LREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVKW 900
            L EIYQ CN+ ++EP ++E A+K + W +A          N+TW+L D P+DK  IGVKW
Sbjct: 237  LSEIYQRCNVVVLEPTNFEEASKVDEWNQAMKEEMTTIEDNKTWQLVDKPKDKNVIGVKW 296

Query: 901  VYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIY 1080
            VY+TKLNPD S+ KYKA LV KGY QQ GIDY+ETFAPVAR D I  L+ALAAQ +W+I+
Sbjct: 297  VYRTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFAPVARRDPIHILLALAAQMKWEIW 356

Query: 1081 QLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFT 1260
             +DVK AFLNG L EEIYV QP+GFVV+G EDKV +L KALYGLKQAPRAWYSRID YF 
Sbjct: 357  HVDVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKLHKALYGLKQAPRAWYSRIDSYFC 416

Query: 1261 ELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLG 1440
              GFRRS+++ TLY+K      +LI+SLYVDDL+ T NN+  + +  E+M   F+M++LG
Sbjct: 417  NQGFRRSENDTTLYVKKLLDGGSLIISLYVDDLLVTSNNQQEVQQLMEEMQNQFKMSNLG 476

Query: 1441 LMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 1620
             M+YFLG+E+HQ KDGIF++Q+KYA  +LK++KME CK V TPL  N  L KEDG+ K +
Sbjct: 477  KMNYFLGLEVHQTKDGIFMNQEKYAHEVLKKYKMESCKFVPTPLVQNLKLSKEDGAEKVN 536

Query: 1621 NSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWY 1800
             S +RSL+GSLLYLT++RPD+MYA S LSRFMQ+PS+IH+ A KRVLRYL+GT  +GIWY
Sbjct: 537  VSLYRSLVGSLLYLTSSRPDLMYAASLLSRFMQSPSEIHFAATKRVLRYLKGTTQFGIWY 596

Query: 1801 EPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIAA 1980
            +P  N  LIGY DSDWAG+IDDMKST GY F+LG  +FSW SKKQ  VAQS+AEAEY+  
Sbjct: 597  KPRKNGSLIGYVDSDWAGNIDDMKSTMGYIFSLGFGMFSWNSKKQEIVAQSTAEAEYVVG 656

Query: 1981 AMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREA 2160
            A  T+QAIWL+RIL D+G  Q +AT+I+CDSKSAIA+A+NPV H +TKHI++K+H IREA
Sbjct: 657  AAATNQAIWLRRILLDLGAEQLEATEIYCDSKSAIAIAQNPVQHGKTKHIQVKFHVIREA 716


>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1120

 Score =  893 bits (2307), Expect = 0.0
 Identities = 446/655 (68%), Positives = 521/655 (79%), Gaps = 6/655 (0%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            +VF IFKKFKA VEKQSG +IK +RSDRGKEYTS +F KFCEDEG+E QLTV Y P+QNG
Sbjct: 469  EVFGIFKKFKALVEKQSGKQIKVLRSDRGKEYTSCEFDKFCEDEGIERQLTVAYTPQQNG 528

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            V ERKNR VME  RSML EKGLP  FWAEAV T VYLLNR PT A ++ TP+E+ S  KP
Sbjct: 529  VLERKNRIVMEMERSMLKEKGLPNIFWAEAVYTVVYLLNRFPTNAFRENTPIESCSGNKP 588

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
            + KHLRVFG ICY+H+P +KR KL++KT + IFLGYS+QSKGYRVY+L T+KL ISRD+ 
Sbjct: 589  ATKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQSKGYRVYNLQTKKLTISRDIE 648

Query: 541  FDEDAAYNWETNQVEKRSINLP---KLTHEQEETSND---PPETPERAXXXXXXXXXXXX 702
             DE+A +NWE  ++EK++I +P     T   E+ + D    PE+P R             
Sbjct: 649  VDENATWNWEEKRIEKKTIYMPINQPTTSSLEDNNQDIVISPESP-RIVPQQEESSPEST 707

Query: 703  XXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKE 882
                RSL +IY+TCNL I+EP S+E AA QEVWVKA          N TWEL D P  K+
Sbjct: 708  PRRVRSLVDIYETCNLAILEPGSFEEAANQEVWVKAMEEEIKMIEKNNTWELVDFPHGKD 767

Query: 883  AIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQ 1062
             IGVKWVYKTKLNPDG++QK+KARLVAKGY+Q+ G+DY+ETFAPVARLDTIR LIALAA 
Sbjct: 768  IIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQKPGVDYNETFAPVARLDTIRTLIALAAH 827

Query: 1063 KQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSR 1242
            K W IYQLDVK AFLNG LEEEIYVEQP GFV++G E KVLRLKKALYGLKQAPRAWYS+
Sbjct: 828  KGWNIYQLDVKSAFLNGVLEEEIYVEQPPGFVMKGHEGKVLRLKKALYGLKQAPRAWYSK 887

Query: 1243 IDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTF 1422
            ID YFT+ GFRRS+SEPTLYIKTQG  +TL++SLYVDDLI+TG N NM+MEFKEDMMKTF
Sbjct: 888  IDQYFTD-GFRRSKSEPTLYIKTQG-QHTLLLSLYVDDLIYTGTNTNMMMEFKEDMMKTF 945

Query: 1423 EMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKED 1602
            EMTDLGLM YFLGIE+ QR DGIFISQKKY E+LLK+F M GCK V T L  N+ L+K D
Sbjct: 946  EMTDLGLMSYFLGIEVSQRNDGIFISQKKYTEALLKKFNMYGCKPVRTLLVTNEKLQKVD 1005

Query: 1603 GSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTK 1782
            G+P+AD S+++SL+GSLLYL ATRPDIMYATS LSRFMQ P+QIHYG  KR+LRYL+GT+
Sbjct: 1006 GAPEADASRYKSLVGSLLYLIATRPDIMYATSLLSRFMQKPNQIHYGTGKRILRYLQGTR 1065

Query: 1783 NYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVA 1947
             +GIWY+ +T S++IGYTD+DWA SIDDMKSTSGYAF+LGS  FSW SKKQATVA
Sbjct: 1066 EFGIWYKNMTKSRMIGYTDNDWARSIDDMKSTSGYAFSLGSGFFSWVSKKQATVA 1120


>gb|KYP61490.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  879 bits (2272), Expect = 0.0
 Identities = 442/772 (57%), Positives = 561/772 (72%), Gaps = 6/772 (0%)
 Frame = +1

Query: 4    VFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGV 183
            VF  F KFK  VE ++G ++K +RSD G EYT+ +F KFCE  G++HQLTV Y P+QNGV
Sbjct: 499  VFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGV 558

Query: 184  SERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPS 363
            SERKNRTVME AR +L EKGLPK+FWAEAV+T+VYLLN  PTKA++  TP EAW  R PS
Sbjct: 559  SERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPS 618

Query: 364  AKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMF 543
             +HL+VFGC+CY  +P+ KR KLD+K+E  IFLGYS+ SKGYR+Y+ +T+K+++SR+V F
Sbjct: 619  VEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKF 678

Query: 544  DEDAAYNWETNQVE---KRSI---NLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXX 705
            DE + +NWE ++ E   KR +   NL +   E EE + D  + P R              
Sbjct: 679  DELSRWNWEKSKAEASNKRQLEVDNLQEQNSESEEQNLDDDDFPVRGT------------ 726

Query: 706  XXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEA 885
               R L EIY+ CN+  +EP  Y  AA+ E W  A          N TW+L D P +++ 
Sbjct: 727  ---RDLAEIYERCNVAALEPKEYAEAAELEGWRVAMQEEMNMIEKNNTWQLVDRPINQKV 783

Query: 886  IGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQK 1065
            IG+KWVY+TKLN DGSV K KARLV KGY QQYG+D+ +TFAPVAR DTIR L+ALAA+ 
Sbjct: 784  IGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKF 843

Query: 1066 QWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRI 1245
             WKIY  DVK AFLNG+LEE+IYV+QP+GF V+G E+KV +L KALYGLKQAPRAWY+RI
Sbjct: 844  GWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVYKLHKALYGLKQAPRAWYTRI 903

Query: 1246 DDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFE 1425
            D+Y  + GF RS++E TLY+K       LI+SLYVDD++  G++ + + +FK DM   FE
Sbjct: 904  DNYLLQKGFERSENEATLYVKRSQNEVKLIISLYVDDMLVIGSDFDSLRQFKHDMENEFE 963

Query: 1426 MTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDG 1605
            M+DLG M+YFLG+EI+Q   GIFISQ+KY   +LK+F ME CK V TPL  N+ L   D 
Sbjct: 964  MSDLGQMNYFLGMEIYQCDAGIFISQRKYVLEILKKFHMEKCKPVDTPLVINEKLSLNDA 1023

Query: 1606 SPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKN 1785
              K D S +RSLIGSLLYL+ATRPDIM+A S LSRFM +PSQ HYGAAKRVLRYL+GT +
Sbjct: 1024 IAKVDASLYRSLIGSLLYLSATRPDIMFAASLLSRFMHSPSQAHYGAAKRVLRYLKGTTD 1083

Query: 1786 YGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEA 1965
            YG+W+    + +L GY DSDWAGSIDD KSTSGY F+ GS +F+W SKKQ  VAQSSAEA
Sbjct: 1084 YGLWFLQNESGELQGYADSDWAGSIDDSKSTSGYVFSFGSGVFTWNSKKQEVVAQSSAEA 1143

Query: 1966 EYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYH 2145
            EYI+AA   + AIWL++IL D+ + Q +AT I+ D+KSAIA+AKNPV + RTKHIK+KYH
Sbjct: 1144 EYISAAAAANHAIWLRKILCDVKQHQNEATIIWVDNKSAIAIAKNPVQYGRTKHIKVKYH 1203

Query: 2146 FIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
             IREAE + E+ L+HC ++ Q+ADI TKAL + KFE+LR  +GV +   KEE
Sbjct: 1204 AIREAEKSKEVSLKHCSSENQIADIMTKALSKSKFEMLRSKLGVCKKNLKEE 1255


>dbj|GAU26309.1| hypothetical protein TSUD_56070 [Trifolium subterraneum]
          Length = 1071

 Score =  872 bits (2252), Expect = 0.0
 Identities = 431/765 (56%), Positives = 543/765 (70%)
 Frame = +1

Query: 7    FDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVS 186
            F++FKKF+A VE QSG KIK +RSD GKEYTS +F KFCEDEG+ HQLTV Y PE+NGVS
Sbjct: 340  FNVFKKFRAMVESQSGCKIKMLRSDNGKEYTSNEFNKFCEDEGIVHQLTVSYTPEKNGVS 399

Query: 187  ERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSA 366
            ERKNRTVME AR ++ EK LPKSFWAEA+                           KPSA
Sbjct: 400  ERKNRTVMEMARCLIAEKKLPKSFWAEAIGV-------------------------KPSA 434

Query: 367  KHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFD 546
            KHL++FG ICY H+P  KRSKLD+K E  IF GY++ SKGYRVY+L T++++ISRD+  D
Sbjct: 435  KHLKIFGSICYAHVPAAKRSKLDDKAEMGIFWGYASSSKGYRVYNLKTKQIVISRDLDVD 494

Query: 547  EDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRSLR 726
            E+A +NWE N+V+   +       + ++ + +  E                     +SL 
Sbjct: 495  ENAYWNWENNEVQNCELKSTSSASDNQQNAANEDE--------YEITESDSPVLKTKSLA 546

Query: 727  EIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVKWVY 906
            EIY+ CN  + EP  +E A+    W  A          N TWELT  P+DK  IGVKWVY
Sbjct: 547  EIYENCNFVVNEPSCFEEASMLTEWKDAMKEELLAINKNGTWELTPRPKDKNVIGVKWVY 606

Query: 907  KTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIYQL 1086
            +TKLNPDGS+ K+KARLV KGY+Q  G+DY +TFA VAR +TIR ++AL+AQ  WK + L
Sbjct: 607  RTKLNPDGSIHKHKARLVVKGYSQMAGVDYGDTFASVARHETIRLIVALSAQNGWKFFHL 666

Query: 1087 DVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFTEL 1266
            DVK AFLNG L+EEIYVEQP GF+V G EDKV RL KALYGLKQAPRAWYSRID +F E 
Sbjct: 667  DVKSAFLNGVLQEEIYVEQPTGFIVSGHEDKVYRLYKALYGLKQAPRAWYSRIDSHFLEN 726

Query: 1267 GFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLGLM 1446
             F+RSQ+EPTLY+K  G    LIVSLYVDDL+ TG++ N I  FK+ M++ FEMTDLG M
Sbjct: 727  DFKRSQNEPTLYVKDYGNGKRLIVSLYVDDLLVTGDDINAINNFKKSMLQAFEMTDLGEM 786

Query: 1447 HYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKADNS 1626
             YFLG+E++Q  DGIF+SQ+KYA  +LK+FK+E CK V+TPL  N+ L K+DG  KAD +
Sbjct: 787  KYFLGMELYQLDDGIFLSQRKYANDVLKKFKLESCKPVSTPLAVNEKLSKDDGDVKADVT 846

Query: 1627 QFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWYEP 1806
            Q+RSLIG LLYLTATRPD+M++ S LSRF  +PS  H+G  KRVLRY++GT ++GIWY  
Sbjct: 847  QYRSLIGCLLYLTATRPDLMFSASLLSRFRHSPSVTHFGVGKRVLRYIKGTSDFGIWYNK 906

Query: 1807 VTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIAAAM 1986
             ++ KL G+ DSDWAGS+DD KST+GY F+LGS +FSW SKKQ  VAQSSAEAEYIAAA 
Sbjct: 907  -SDGKLEGFVDSDWAGSVDDSKSTTGYVFSLGSGVFSWNSKKQDVVAQSSAEAEYIAAAA 965

Query: 1987 TTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIREAEA 2166
             ++QAIW+K++L D+   Q +   ++CD+KSAI++AKNP+ H RTKHI +K+H IREAE 
Sbjct: 966  ASNQAIWIKKVLTDLNHGQMEPIVLWCDNKSAISIAKNPIQHGRTKHINVKFHVIREAEK 1025

Query: 2167 NSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
            N +++L HC ++EQLADI TKALP  KF  LR  +GV +   KEE
Sbjct: 1026 NGDVQLMHCSSEEQLADILTKALPSAKFMELRSKLGVFKKFFKEE 1070


>emb|CAN74029.1| hypothetical protein VITISV_013540 [Vitis vinifera]
          Length = 894

 Score =  852 bits (2202), Expect = 0.0
 Identities = 423/769 (55%), Positives = 542/769 (70%), Gaps = 2/769 (0%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            +VF +FK+FKA VE QS   IK +RSD G EYTS+QF +FC   G+E QLT  Y P+QNG
Sbjct: 133  EVFSVFKQFKALVENQSNLSIKILRSDNGTEYTSSQFVEFCSTAGIECQLTTPYTPQQNG 192

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            VSERKNRTVME AR +L EK +P +FWAEAV+T+VYLLNR PTK++++KTP E W   KP
Sbjct: 193  VSERKNRTVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKP 252

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
               HL++FG ICY H+P+ KRSKLD + +K I +GY T +KGYR++ L T K+++SR+V 
Sbjct: 253  FVNHLKIFGSICYYHVPEPKRSKLDSRAQKGILIGYGTSTKGYRIFCLQTNKVVLSRNVK 312

Query: 541  FDEDAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXXRS 720
             DE A ++ +  +  +  ++     HE  +TS    + P R                 RS
Sbjct: 313  VDEMATWDCKNKKYAQSDVDFNN--HEDFQTSKSVDDFPVRGI---------------RS 355

Query: 721  LREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVKW 900
            L +IYQ C+L I EP SY  A   E W +A          NETW+L + P++ + IGVKW
Sbjct: 356  LEDIYQRCSLAITEPTSYVEAKDSEAWRRAMQEELKMINKNETWQLVERPKNHKVIGVKW 415

Query: 901  VYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKIY 1080
            V+KTKLN DGS+ K+KA+LV KGYAQQYG+DY ETFAPVAR DTIR L  LAAQ  W I+
Sbjct: 416  VFKTKLNSDGSICKHKAKLVVKGYAQQYGVDYKETFAPVARYDTIRLLFVLAAQNSWHIH 475

Query: 1081 QLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYFT 1260
            QLDVK AFLNG++++EIYVEQP G V   KED V  L+KALYGLKQAPRAWY  +D + T
Sbjct: 476  QLDVKSAFLNGFVDKEIYVEQPDGVVAPSKEDYVYLLRKALYGLKQAPRAWYETMDKHLT 535

Query: 1261 ELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDLG 1440
            +LGF RSQSE TLY+KT      LI+SLYVDD++ TGN   +I  FK++M K FEMTDLG
Sbjct: 536  KLGFVRSQSEATLYVKTNDV-QLLIISLYVDDMLVTGNQPKLIQSFKDEMNKVFEMTDLG 594

Query: 1441 LMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKAD 1620
             M YFLG+E+ Q    IFI Q+KYA  +LK+FKM+  K V+TP+  N+ L K+DGS K +
Sbjct: 595  AMKYFLGMEVMQSCSRIFICQQKYAMDMLKKFKMQDYKPVSTPMTTNEKLSKDDGSEKIN 654

Query: 1621 NSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIWY 1800
               +RSLIGSLLYLTA+RPDI++A S LSRFM +PS+ H+ AAKRVLRY++GT + G+ +
Sbjct: 655  EGLYRSLIGSLLYLTASRPDILFAVSVLSRFMHSPSEKHFSAAKRVLRYIKGTIDLGVQF 714

Query: 1801 EPVTNS--KLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYI 1974
                    KL+GY++SDW G +DD +STSGY F+LG   F+W+ KKQ T AQS+ EAEYI
Sbjct: 715  SKSAEDDLKLLGYSNSDWGGCVDDSRSTSGYLFSLGLGCFTWSLKKQETTAQSTVEAEYI 774

Query: 1975 AAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIR 2154
            AAA   +QA+WLK+IL+D+G+ Q +AT I CD+ SA+++ KNPVFH RTKHIKIKYHFIR
Sbjct: 775  AAASAINQALWLKKILKDLGQEQVEATNIMCDNISAVSILKNPVFHGRTKHIKIKYHFIR 834

Query: 2155 EAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
            E + ++E+ L HC +D QL DIFTK LP  +FE L+  IGV     KEE
Sbjct: 835  EVQQSNEVLLVHCSSDNQLVDIFTKPLPMERFEALKQKIGVCHPDAKEE 883


>gb|KYP34090.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1270

 Score =  865 bits (2235), Expect = 0.0
 Identities = 427/774 (55%), Positives = 555/774 (71%), Gaps = 7/774 (0%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            +V DIF KFK  VE QS  K++ IRSD G EYTS +F KFCED GVEHQLT  Y+P+QNG
Sbjct: 516  EVADIFWKFKTLVENQSKCKMQMIRSDNGTEYTSKKFNKFCEDTGVEHQLTAPYSPQQNG 575

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
             +ERKNRT+ME AR +L +K LPK FWAEAV+TAV+LLNR PTKA+Q KTP EAW   KP
Sbjct: 576  TAERKNRTIMEMARCLLHDKDLPKKFWAEAVNTAVFLLNRLPTKALQQKTPFEAWYGYKP 635

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
               +L++FGC+C+ +IP  KR KLD+K E  IF+GYS  SK YR+Y     K+I+SRDV 
Sbjct: 636  ELFNLKIFGCLCFSYIPHIKRDKLDKKAEPGIFVGYSLISKAYRIYLPHKNKVIVSRDVK 695

Query: 541  FDEDAAYNWETNQ-------VEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXX 699
            F E   ++W+ N+       ++ +  N   L  E E+  ++P                  
Sbjct: 696  FLEFDCWSWKDNKFLEQIDCLDWKGNNELGLQEENEDVDDEPVR---------------- 739

Query: 700  XXXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDK 879
                 R L +IYQ CN+ +MEP  YE AA  + W+ A          N+TW+L D P  K
Sbjct: 740  ---GTRLLSDIYQRCNVAVMEPGGYEEAATDKKWINAMEEELKMIEKNQTWQLVDRPSHK 796

Query: 880  EAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAA 1059
            +AIGVKWVY+TK NPDGSV KYKARLV KGYAQ +G+D+SETFAPVARLDTIR L+ALAA
Sbjct: 797  KAIGVKWVYRTKFNPDGSVNKYKARLVVKGYAQMFGVDFSETFAPVARLDTIRLLLALAA 856

Query: 1060 QKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYS 1239
            QK W I+QLDVK AFLNGYLEEEI+VEQP+GF +QG+EDKV  LKKALYGLKQAPR+WYS
Sbjct: 857  QKGWLIHQLDVKSAFLNGYLEEEIFVEQPEGFALQGQEDKVYLLKKALYGLKQAPRSWYS 916

Query: 1240 RIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKT 1419
            RID +   LGF +S SE TLYIK +   + L++SLYVDDL  TGN + MI +FKE+M   
Sbjct: 917  RIDAHLMSLGFVKSLSEYTLYIK-KVNEDILMISLYVDDLFVTGNCKEMIDKFKEEMENV 975

Query: 1420 FEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKE 1599
            FEMTDLG M +FLG+++ Q+K+ IF+ Q+KYA+ +L +F M  CK+ ATP++  +   +E
Sbjct: 976  FEMTDLGKMTFFLGMQVQQKKNEIFVCQEKYAKEVLMKFNMGECKSAATPMNQKEKFCRE 1035

Query: 1600 DGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGT 1779
            DG+ K D   FRSLIG L+YLTATRPDIM++ S LSR+M   S+IH+ AAKR+LRY++GT
Sbjct: 1036 DGAEKVDEKLFRSLIGCLMYLTATRPDIMHSVSLLSRYMHCASEIHFQAAKRILRYVKGT 1095

Query: 1780 KNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSA 1959
             +YG+W++ V +    GY+DSDWAG +DDM+STSGY F+LGS +FSW SKKQ  +AQS+A
Sbjct: 1096 IDYGVWFKKVESLSFHGYSDSDWAGCVDDMRSTSGYCFSLGSGVFSWCSKKQEIIAQSTA 1155

Query: 1960 EAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIK 2139
            EAEY+AAA   +Q +W+++I+ D+   QE +TKIF D+++AI++A NPVFH +TKH KIK
Sbjct: 1156 EAEYVAAAAAVNQTVWIRKIMADLHIEQEDSTKIFVDNQAAISIANNPVFHGKTKHFKIK 1215

Query: 2140 YHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
              F+RE +   +++L +CK+++Q+ADI TKALP+ +FE LR  +GV     KEE
Sbjct: 1216 LFFLREVQREGQVKLVYCKSEDQVADILTKALPKSRFEFLRQKLGVCSSKVKEE 1269


>gb|KYP79141.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 990

 Score =  851 bits (2199), Expect = 0.0
 Identities = 430/765 (56%), Positives = 535/765 (69%), Gaps = 7/765 (0%)
 Frame = +1

Query: 10   DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 189
            D FK FKA+VEKQSG KIK +R+DRG+EY +     F +  G++HQ+T  Y P+QNGV+E
Sbjct: 228  DAFKSFKAFVEKQSGCKIKALRTDRGQEYLAC--ANFFDHHGIQHQMTTRYTPQQNGVAE 285

Query: 190  RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 369
            RKNRT+M+  R ML  K +P+ FWAEAVSTAVY+LNRCPTK+V DKTP EAWS RKPS +
Sbjct: 286  RKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIR 345

Query: 370  HLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 549
            HL++FGCI Y H+P Q R KLD+K EKCIF+GYST SK Y++Y+  T+K+IISRDV FDE
Sbjct: 346  HLKIFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDE 405

Query: 550  DAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXX----- 714
            +  ++W     ++  IN P+   E+    N  P+ PE +                     
Sbjct: 406  EGMWDWSFKAQKEPVIN-PENYEEENGHVNPTPDEPETSSRPQRQRRLPARLEDYVVGND 464

Query: 715  --RSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAI 888
               S  EI         EP ++E A+  + W KA          N+TWELTDLP DK+ I
Sbjct: 465  NDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPI 524

Query: 889  GVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQ 1068
            GVKWVYKTK    G + + KARLV KGY Q+ GIDY E FAPVARLDTIR LI+L+AQ  
Sbjct: 525  GVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNN 584

Query: 1069 WKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRID 1248
            WKI+Q+DVK AFLNG LEEE+YVEQP G+ V+GKEDKV RLKKALYGLKQAPRAWY +ID
Sbjct: 585  WKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKKID 644

Query: 1249 DYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEM 1428
             YF   GF++   E TLYIK+   +N LIV LYVDDLIFTGNN  M  +F+E M K FEM
Sbjct: 645  SYFVNNGFQKCPFEHTLYIKSVDLDNILIVCLYVDDLIFTGNNPKMFAKFREAMAKCFEM 704

Query: 1429 TDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGS 1608
            TDLGLM YFLGIE+ QR DGIFISQKK+A  +LK+FKME  K ++TP++    L  + G 
Sbjct: 705  TDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDIGG 764

Query: 1609 PKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNY 1788
             K + + ++SLIGSL YLTATRPDI+Y    LSRFM+ P   H+ AAKR+LRY++GT   
Sbjct: 765  KKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTE 824

Query: 1789 GIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAE 1968
            GI+Y+   +  L+GYTDSDWAG I+  KSTSGYAF LGS   SW+SKKQ  VA S+AEAE
Sbjct: 825  GIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAE 884

Query: 1969 YIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHF 2148
            YIAAA   +QA+WL+R+LE M + Q   T IFCD+KSAIA+ KNPVFH R+KHI I++H 
Sbjct: 885  YIAAASCATQAVWLRRMLEVMYQKQNTPTMIFCDNKSAIALCKNPVFHGRSKHIDIRFHK 944

Query: 2149 IREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTE 2283
            IRE  A  E+ +E+C T+EQ+ADIFTK L    F  L+ M+G+ +
Sbjct: 945  IRELVAEKEVTIEYCSTEEQVADIFTKPLKVELFCKLKRMLGMIQ 989


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score =  855 bits (2208), Expect = 0.0
 Identities = 422/780 (54%), Positives = 541/780 (69%), Gaps = 14/780 (1%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            + FD+FK FKA VEKQS  ++K +R+DRG E+TST+F +FCE EG+ H+LT  Y PEQNG
Sbjct: 382  EAFDMFKNFKALVEKQSEQQVKVLRTDRGGEFTSTKFNQFCEKEGIHHELTTAYTPEQNG 441

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            V+ERKN TV+E ARSML E+ LP  FWAE+V TAVYLLN  PTKAV ++TP EAW  RKP
Sbjct: 442  VAERKNTTVVEMARSMLKERNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKP 501

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
               HLRVFG +CY  I    R KLDEK+EKCIFLGY +QSKGYR+Y+  + K++ SR+V 
Sbjct: 502  GVSHLRVFGSVCYSLIDAHNRKKLDEKSEKCIFLGYCSQSKGYRLYNPVSGKIVESRNVT 561

Query: 541  FDEDAAYNW-ETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXX- 714
            FDE+A + W E +  E   I +     E    +N    TP  +                 
Sbjct: 562  FDEEAVWTWREGDNGELVEIFVNDEQEENPSPANSATNTPASSAPSSPGPNNGNGSSDGE 621

Query: 715  -----------RSLREIYQTCNLTIM-EPDSYEAAAKQEVWVKAXXXXXXXXXXNETWEL 858
                       RSLREIY+  +     +P +   AA +E W KA          N+TW+L
Sbjct: 622  GSSSISPPQKFRSLREIYEEQHAFFSADPVTVNEAATKEEWRKAMEEEIASIEKNQTWQL 681

Query: 859  TDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIR 1038
             +LP++K +IGVKWV+KTK   D ++QKYKARLV KGYAQ+YG+DY +TF+PVAR DT+R
Sbjct: 682  VELPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQEYGVDYEKTFSPVARFDTLR 741

Query: 1039 ALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQ 1218
             L+AL A   W IYQ DVK AFLNG L EE+YV+QP+GF+V+G+E  V RL KALYGLKQ
Sbjct: 742  TLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVYRLYKALYGLKQ 801

Query: 1219 APRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEF 1398
            APRAWY++ID YF E GF RS+SEPTLYIK QG  + L+V LYVDD+I+ G++ +++ EF
Sbjct: 802  APRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIYMGSSASLVSEF 861

Query: 1399 KEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDN 1578
            K  MM+ FEMTDLGL+++FLG+E+ Q +DG+F+SQ KYA  LLKRF M GC  V TP++ 
Sbjct: 862  KASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVSQHKYACDLLKRFDMAGCNAVETPMNV 921

Query: 1579 NKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRV 1758
            N+ L   DG+ KAD ++FRSL+G L+YLT TRPDI +A S +SRFM  P++ H+GAAKR+
Sbjct: 922  NEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGPTKQHFGAAKRL 981

Query: 1759 LRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQA 1938
            LRY+  T  YG+WY  V+  KL+G+TDSDWAG + D KSTSG+ F LGS    W+SKKQ 
Sbjct: 982  LRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQN 1041

Query: 1939 TVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNR 2118
              A SS+EAEY AA     QA+WL+RIL D+ + QEKAT IFCD+K+ IAM KNP +H R
Sbjct: 1042 VTALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGR 1101

Query: 2119 TKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKE 2298
            TKHI IK HFIR+  +   + LE+C T+EQ AD+ TKAL R KF+  R  +GV +  + E
Sbjct: 1102 TKHISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALSRNKFDYFRSKLGVCKFESME 1161


>gb|KYP71150.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  856 bits (2212), Expect = 0.0
 Identities = 432/765 (56%), Positives = 538/765 (70%), Gaps = 7/765 (0%)
 Frame = +1

Query: 10   DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 189
            D FK FKA+VEKQSG KIK +R+DRG+EY +     F +  G++HQ+T  Y P+QNGV+E
Sbjct: 466  DAFKSFKAFVEKQSGCKIKALRTDRGQEYLAC--ANFFDHHGIQHQMTTRYTPQQNGVAE 523

Query: 190  RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 369
            RKNRT+M+  R ML  K +P+ FWAEAVSTAVY+LNRCPTK+V DKTP EAWS RKPS +
Sbjct: 524  RKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIR 583

Query: 370  HLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 549
            HL++FGCI Y H+P Q R KLD+K EKCIF+GYST SK Y++Y+  T+K+IISRDV FDE
Sbjct: 584  HLKIFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDE 643

Query: 550  DAAYNWETNQVEKRSINLPKLTHEQEETSNDPPETPERAXXXXXXXXXXXXXXXX----- 714
            +  ++W     ++  IN P+   E+    N  P+ PE +                     
Sbjct: 644  EGMWDWSFKAQKEPVIN-PENYEEENGHVNPTPDEPETSSRPQRQRRLPARLEDYVVGND 702

Query: 715  --RSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAI 888
               S  EI         EP ++E A+  + W KA          N+TWELTDLP DK+ I
Sbjct: 703  NDPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPADKKPI 762

Query: 889  GVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQ 1068
            GVKWVYKTK    G + + KARLV KGY Q+ GIDY E FAPVARLDTIR LI+L+AQ  
Sbjct: 763  GVKWVYKTKYKSSGEIDRLKARLVVKGYKQKPGIDYFEVFAPVARLDTIRMLISLSAQNN 822

Query: 1069 WKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRID 1248
            WKI+Q+DVK AFLNG LEEE+YVEQP G+ V+GKEDKV RLKKALYGLKQAPRAWY +ID
Sbjct: 823  WKIHQMDVKSAFLNGTLEEEVYVEQPAGYEVKGKEDKVYRLKKALYGLKQAPRAWYKKID 882

Query: 1249 DYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEM 1428
             YF + GF+R   E TLYIK+   +N LIV LYVDDLIFTGNN  M +EF+E M+K FEM
Sbjct: 883  SYFVDNGFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFVEFREAMVKCFEM 942

Query: 1429 TDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGS 1608
            TDLGLM YFLGIE+ QR DGIFISQKK+A  +LK+FKME  K ++TP++    L  + G 
Sbjct: 943  TDLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSDIGG 1002

Query: 1609 PKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNY 1788
             K + + ++SLIGSL YLTATRPDI+Y    LSRFM+ P   H+ AAKR+LRY++GT   
Sbjct: 1003 KKVNPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTE 1062

Query: 1789 GIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAE 1968
            GI+Y+   +  L+GYTDSDWAG I+  KSTSGYAF LGS   SW+SKKQ  VA S+AEAE
Sbjct: 1063 GIFYDKNIDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAE 1122

Query: 1969 YIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHF 2148
            YIAAA   +QA+WL+R+LE M + Q   T IFCD+KSAIA+ KNPVFH R+KHI I++H 
Sbjct: 1123 YIAAASCATQAVWLRRMLEVMYQKQNTPTMIFCDNKSAIALCKNPVFHGRSKHIDIRFHK 1182

Query: 2149 IREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTE 2283
            IRE  A  E+ +E+C T+EQ+ADIFTK L    F  L+ M+G+ +
Sbjct: 1183 IRELVAEKEVTIEYCSTEEQVADIFTKPLKVELFCKLKRMLGMIQ 1227


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  880 bits (2273), Expect = 0.0
 Identities = 431/768 (56%), Positives = 549/768 (71%), Gaps = 1/768 (0%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            QV  +FK FK  VE QSG  +K +R+D G EYTS +F+ FC++ G+ HQLT  Y+P+ NG
Sbjct: 1281 QVLSMFKSFKKMVETQSGQXVKVLRTDNGGEYTSKEFSVFCQEAGIVHQLTAPYSPQXNG 1340

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            VSERKNRTVME AR ML EK LPK  WAEAV+T+VYLLNR PTK+VQ KTP+EAWS  KP
Sbjct: 1341 VSERKNRTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIEAWSGVKP 1400

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
            S KHL+VFG  CY+H+P  KR KLDE+ EK +F+GY+ +SKGYR+YSLS  K++ISRDV 
Sbjct: 1401 SVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVH 1460

Query: 541  FDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSNDPPETPERAXXXXXXXXXXXXXXXXR 717
            FDE++ + W+  +V K     P +     E T  + P   E                  R
Sbjct: 1461 FDENSYWXWDLKKVHKCDQTTPSILEPAIESTIIEGPLDVEATSDTPVLKM--------R 1512

Query: 718  SLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVK 897
             L ++Y+ CNL   EP  Y  AA+   W++A          N TW+LT+LP+ K AIGVK
Sbjct: 1513 PLFDVYERCNLVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGVK 1572

Query: 898  WVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKI 1077
            WV++TK N DGS+ ++KARLV KG+AQ  G+DY +TFAPVAR DTIR L+ALA Q  WK+
Sbjct: 1573 WVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFAPVARHDTIRLLLALAGQMGWKV 1632

Query: 1078 YQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYF 1257
            Y LDVK AFLNG L EEIYV+QP+GF V G E KV +L KALYGLKQAPRAWYSRID + 
Sbjct: 1633 YHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYSRIDSHL 1692

Query: 1258 TELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDL 1437
             +LGFRRS++E TLY+K       L+VSLYVDD++ TG+N  ++ +FK +M   FEM DL
Sbjct: 1693 IQLGFRRSENEATLYLKQNDDGLQLVVSLYVDDMLVTGSNVKLLADFKMEMQDVFEMFDL 1752

Query: 1438 GLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKA 1617
            G+M+YFLG+EI+Q   GIFISQ+KYA  +LK+FK+E CK VATPL  N+ + K DG    
Sbjct: 1753 GIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLE 1812

Query: 1618 DNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIW 1797
            + S +RSL+GSLLYLT T+PD+M+  S LSRFM +PS +H G AKRVL+YL+GT N GIW
Sbjct: 1813 EPSAYRSLVGSLLYLTVTKPDLMFPASLLSRFMSSPSNVHMGVAKRVLKYLKGTTNLGIW 1872

Query: 1798 YEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIA 1977
            Y      KL GY DSDWAGS+DDMKSTSGYAFT+GS +  W S+KQ  VAQS+ EAEYI+
Sbjct: 1873 YLKTGGVKLDGYADSDWAGSVDDMKSTSGYAFTIGSGVICWNSRKQEVVAQSTTEAEYIS 1932

Query: 1978 AAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIRE 2157
             A   +QAIWL+++L D+G+ Q   T+++CD+KSAI++A+NPV H RTKHI +K+H IRE
Sbjct: 1933 LAAAANQAIWLRKLLADLGQEQSSPTELYCDNKSAISIAQNPVHHGRTKHINVKFHSIRE 1992

Query: 2158 AEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEICTKEE 2301
            AE NS ++L +C TDEQLADI TK LP+ + E LR  +G+++   KEE
Sbjct: 1993 AEKNSLVKLHYCSTDEQLADIMTKGLPKSRLEFLRLKLGMSKANLKEE 2040


>gb|KYP46287.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 715

 Score =  836 bits (2159), Expect = 0.0
 Identities = 420/729 (57%), Positives = 532/729 (72%), Gaps = 6/729 (0%)
 Frame = +1

Query: 133  GVEHQLTVGYAPEQNGVSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTK 312
            G++HQLTV Y P+QNGVSERKNRTVME AR +L EKGLPK+FWAEAV+T+VYLLN  PTK
Sbjct: 1    GIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTK 60

Query: 313  AVQDKTPVEAWSRRKPSAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYR 492
            A++  TP EAW  R PS +HL+VFGC+CY  +P+ KR KLD+K+E  IFLGYS+ SKGYR
Sbjct: 61   ALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYR 120

Query: 493  VYSLSTRKLIISRDVMFDEDAAYNWETNQVE---KRSI---NLPKLTHEQEETSNDPPET 654
            +Y+ +T+K+++SR+V FDE + +NWE ++ E   KR +   NL +   E EE + D  + 
Sbjct: 121  IYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLEVDNLQEQNSESEEQNLDDDDF 180

Query: 655  PERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXX 834
            P R                 R L EIY+ CN+  +EP  Y  AA+ E W  A        
Sbjct: 181  PVRGT---------------RDLAEIYERCNVAALEPKEYAEAAELEGWRVAMQEEMNMI 225

Query: 835  XXNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAP 1014
              N TW+L D P +++ IG+KWVY+TKLN DGSV K KARLV KGY QQYG+D+ +TFAP
Sbjct: 226  EKNNTWQLVDRPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAP 285

Query: 1015 VARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLK 1194
            VAR DTIR L+ALAA+  WKIY  DVK AFLNG+LEE+IYV+QP+GF V+G E+KV +L 
Sbjct: 286  VARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGFQVKGSENKVYKLH 345

Query: 1195 KALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGN 1374
            KALYGLKQAPRAWY+RID+Y  + GF RS++E TLY+K       LI+SLYVDD++  G+
Sbjct: 346  KALYGLKQAPRAWYTRIDNYLLQKGFERSENEATLYVKRSQNEVKLIISLYVDDMLVIGS 405

Query: 1375 NENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCK 1554
            + + + +FK DM   FEM+DLG M+YFLG+EI+Q   GIFISQ+KY   +LK+F ME CK
Sbjct: 406  DFDSLRQFKHDMENEFEMSDLGQMNYFLGMEIYQCDAGIFISQRKYVLEILKKFHMEKCK 465

Query: 1555 TVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQI 1734
             V TPL  N+ L   D   K D S +RSLIGSLLYL+ATRPDIM+A S LSRFM +PSQ 
Sbjct: 466  PVDTPLVINEKLSLNDAIAKVDASLYRSLIGSLLYLSATRPDIMFAASLLSRFMHSPSQA 525

Query: 1735 HYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIF 1914
            HYGAAKRVLRYL+GT +YG+W+    + +L GY DSDWAGSIDD KSTSGY F+ GS +F
Sbjct: 526  HYGAAKRVLRYLKGTTDYGLWFLQNESGELQGYADSDWAGSIDDSKSTSGYVFSFGSGVF 585

Query: 1915 SWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMA 2094
            +W SKKQ  VAQSSAEAEYI+AA   + AIWL++IL D+ + Q +AT I+ D+KSAIA+A
Sbjct: 586  TWNSKKQEVVAQSSAEAEYISAAAAANHAIWLRKILCDVKQHQNEATIIWVDNKSAIAIA 645

Query: 2095 KNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIG 2274
            KNPV + RTKHIK+KYH IREAE + E+ L+HC ++ Q+ADI TKAL + KFE+LR  +G
Sbjct: 646  KNPVQYGRTKHIKVKYHAIREAEKSKEVSLKHCSSENQIADIMTKALSKSKFEMLRSKLG 705

Query: 2275 VTEICTKEE 2301
            V +   KEE
Sbjct: 706  VCKKNLKEE 714


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa]
          Length = 1314

 Score =  854 bits (2206), Expect = 0.0
 Identities = 433/788 (54%), Positives = 549/788 (69%), Gaps = 32/788 (4%)
 Frame = +1

Query: 10   DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 189
            + FKKFK  VE QS  KIK +RSD+G EY S +F K+CE+ G+  QLT GY+ +QNGV+E
Sbjct: 570  ETFKKFKVMVENQSNRKIKVLRSDQGGEYISKEFEKYCENAGIRRQLTTGYSAQQNGVAE 629

Query: 190  RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 369
            RKNRT+ + A SML +KG+PKSFWAEAV+TAVY+LNR PTKAV ++TP EAW  +KP   
Sbjct: 630  RKNRTINDMANSMLQDKGMPKSFWAEAVNTAVYILNRSPTKAVPNRTPFEAWYGKKPVIG 689

Query: 370  HLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 549
            H+RVF CICY  +P QKR K D K+ +CIF+GY+   KGYR+Y+L  +K+IISRDV FDE
Sbjct: 690  HMRVFACICYAQVPAQKRVKFDNKSNRCIFVGYADGIKGYRLYNLEKKKIIISRDVFFDE 749

Query: 550  DAAYNWETNQVEKR--------SINLPKL--THEQEETSNDPP----------------- 648
             A +NW++ +            ++  P +  THE E+ +  P                  
Sbjct: 750  SATWNWKSPEASSTPLLPTTTITLGQPHMHGTHEVEDHTPSPQPSSPMSSSSASSDSSPS 809

Query: 649  -----ETPERAXXXXXXXXXXXXXXXXRSLREIYQTCNLTIMEPDSYEAAAKQEVWVKAX 813
                  TPE A                +   E ++ CN +++EP S++ A K + W+KA 
Sbjct: 810  SEEQISTPESAPRRVRSMVELLESTSQQRGSEQHEFCNYSVVEPQSFQEAEKHDNWIKAM 869

Query: 814  XXXXXXXXXNETWELTDLPQDKEAIGVKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGID 993
                     N TWE  D P+D+E IGVKWVYKTKLNPDGSVQKYKARLVAKG+ Q+ GID
Sbjct: 870  EDEIHMIEKNNTWEFVDRPRDREVIGVKWVYKTKLNPDGSVQKYKARLVAKGFKQKPGID 929

Query: 994  YSETFAPVARLDTIRALIALAAQKQWKIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKE 1173
            Y ET+APVARL+TIR +IALAAQK+WKIYQLDVK AFLNGYL+EEIYVEQP+ F VQG E
Sbjct: 930  YYETYAPVARLETIRTIIALAAQKRWKIYQLDVKSAFLNGYLDEEIYVEQPEWFSVQGGE 989

Query: 1174 DKVLRLKKALYGLKQAPRAWYSRIDDYFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVD 1353
            +K                             GF +S SEPTLY+   GT+  LIVSLYVD
Sbjct: 990  NKK----------------------------GFAKSISEPTLYVNKTGTD-ILIVSLYVD 1020

Query: 1354 DLIFTGNNENMIMEFKEDMMKTFEMTDLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKR 1533
            DLI+TGN++ M+ +FK+DMM T+EM+DLGL+HYFLG+E+HQ  +GIFISQ+KYAE++LK+
Sbjct: 1021 DLIYTGNSDKMMQDFKKDMMHTYEMSDLGLLHYFLGMEVHQSDEGIFISQRKYAENILKK 1080

Query: 1534 FKMEGCKTVATPLDNNKALKKEDGSPKADNSQFRSLIGSLLYLTATRPDIMYATSFLSRF 1713
            FKM+ CK+V TPL  N+  K  DG+ KAD + +RSL+GSLLYLTATRPDIM+A S LSR+
Sbjct: 1081 FKMDNCKSVTTPLLPNEKQKARDGADKADPTIYRSLVGSLLYLTATRPDIMFAASLLSRY 1140

Query: 1714 MQNPSQIHYGAAKRVLRYLEGTKNYGIWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAF 1893
            M +PSQ+++ AAKRVLRY++GT +YGIWY+PV  SKLIGYTDSDWAG +DDMKSTSGYAF
Sbjct: 1141 MSSPSQLNFTAAKRVLRYIKGTADYGIWYKPVKESKLIGYTDSDWAGCLDDMKSTSGYAF 1200

Query: 1894 TLGSEIFSWASKKQATVAQSSAEAEYIAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDS 2073
            +LG                 SAEAEY+AA+   SQ +WL+RI+ED GE Q + T I+CDS
Sbjct: 1201 SLG-----------------SAEAEYVAASKAVSQVVWLRRIMEDQGEKQYQPTTIYCDS 1243

Query: 2074 KSAIAMAKNPVFHNRTKHIKIKYHFIREAEANSEIELEHCKTDEQLADIFTKALPRGKFE 2253
            KSAIA+++NPV H+RTKHI IKYH+IREA    E++LE C+TDEQLADIFTKAL + KF 
Sbjct: 1244 KSAIAISENPVSHDRTKHIAIKYHYIREAVDRQEVKLEFCRTDEQLADIFTKALSKEKFV 1303

Query: 2254 ILRDMIGV 2277
              +++IGV
Sbjct: 1304 RDKELIGV 1311


>gb|KYP77007.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1228

 Score =  848 bits (2192), Expect = 0.0
 Identities = 428/765 (55%), Positives = 535/765 (69%), Gaps = 6/765 (0%)
 Frame = +1

Query: 10   DIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNGVSE 189
            D FK FKA VEKQS  KIK +R+DRG+EY +     F +  G++HQ+T  Y P+QNGV+E
Sbjct: 466  DAFKSFKALVEKQSSCKIKALRTDRGQEYLAC--ADFIDHHGIQHQMTTRYTPQQNGVAE 523

Query: 190  RKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKPSAK 369
            RKNRT+M+  R ML  K +P+ FWAEAVSTAVY+LNRCPTK+V DKTP EAWS RKPS +
Sbjct: 524  RKNRTIMDMVRCMLKAKQMPREFWAEAVSTAVYILNRCPTKSVCDKTPEEAWSGRKPSIR 583

Query: 370  HLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVMFDE 549
            HLR+FGCI Y H+P Q R KLD+K EKCIF+GYST SK Y++Y+  T+K+IISRDV FDE
Sbjct: 584  HLRIFGCIAYAHVPDQLRKKLDDKGEKCIFIGYSTNSKAYKLYNPVTKKVIISRDVTFDE 643

Query: 550  DAAYNWETNQVEKRSINLPKLTHEQE--ETSNDPPETPERAXXXXXXXXXXXXXXXXR-- 717
            +  ++W     +  ++N      E    +T+ D PET  R                    
Sbjct: 644  EGMWDWSFKAQKVPAVNSENYEEENGHVDTTPDEPETSSRPQRQRRLPARLEDYVVGNDN 703

Query: 718  --SLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIG 891
              S  EI         EP ++E A+  + W KA          N+TWELTDLP +K  IG
Sbjct: 704  DPSDEEIINFALFADCEPVTFEEASNNQYWRKAMDEEIHAIEKNQTWELTDLPANKRQIG 763

Query: 892  VKWVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQW 1071
            VKWVYKTK   +G + ++KARLVAKGY Q+ GIDY E FAPVARLDTIR LI+++AQ  W
Sbjct: 764  VKWVYKTKYKSNGEIDRFKARLVAKGYKQKPGIDYFEVFAPVARLDTIRMLISISAQNNW 823

Query: 1072 KIYQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDD 1251
            KI+Q+DVK AFLNG LEEE+YVEQP G+ ++GKEDKV RLKKALYGLKQAPRAWY +ID 
Sbjct: 824  KIHQMDVKSAFLNGTLEEEVYVEQPAGYKIKGKEDKVYRLKKALYGLKQAPRAWYKKIDS 883

Query: 1252 YFTELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMT 1431
            YF + GF+R   E TLYIK+   +N LIV LYVDDLIFTGNN  M  EF+E M+K+FEMT
Sbjct: 884  YFVDNGFQRCPFEHTLYIKSVDPDNILIVCLYVDDLIFTGNNPKMFAEFREAMVKSFEMT 943

Query: 1432 DLGLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSP 1611
            DLGLM YFLGIE+ QR DGIFISQKK+A  +LK+FKME  K ++TP++    L       
Sbjct: 944  DLGLMSYFLGIEVDQRDDGIFISQKKFAGDILKKFKMENSKPISTPVEEKLKLTSNIEGK 1003

Query: 1612 KADNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYG 1791
            K + + ++SLIGSL YLTATRPDI+Y    LSRFM+ P   H+ AAKR+LRY++GT   G
Sbjct: 1004 KINPTLYKSLIGSLRYLTATRPDIVYGVGLLSRFMEKPRDSHWQAAKRILRYIKGTLTEG 1063

Query: 1792 IWYEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEY 1971
            I+Y+   +  L+GYTDSDWAG I+  KSTSGYAF LGS   SW+SKKQ  VA S+AEAEY
Sbjct: 1064 IFYDKDFDVNLVGYTDSDWAGDIETRKSTSGYAFNLGSGTISWSSKKQQVVALSTAEAEY 1123

Query: 1972 IAAAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFI 2151
            IAAA   +QA+WL+R+LE M + Q+  T IFCD+KSAIA+ KN VFH R+KHI I++H I
Sbjct: 1124 IAAASCATQAVWLRRMLEVMHQKQDNPTVIFCDNKSAIAICKNLVFHERSKHIDIRFHKI 1183

Query: 2152 REAEANSEIELEHCKTDEQLADIFTKALPRGKFEILRDMIGVTEI 2286
            RE     E+ + +C T+EQ+ADIFTK L    F  L+ M+G+T+I
Sbjct: 1184 RELVTEKEVLINYCHTEEQIADIFTKPLKAELFYKLKKMLGMTKI 1228


>emb|CAN74767.1| hypothetical protein VITISV_041860, partial [Vitis vinifera]
          Length = 1945

 Score =  866 bits (2237), Expect = 0.0
 Identities = 421/755 (55%), Positives = 538/755 (71%), Gaps = 1/755 (0%)
 Frame = +1

Query: 1    QVFDIFKKFKAYVEKQSGHKIKTIRSDRGKEYTSTQFTKFCEDEGVEHQLTVGYAPEQNG 180
            QV  +FK FK  VE QSG   K + +D G EY S +F  FC++ G+ HQLT  Y+P+QNG
Sbjct: 636  QVXSVFKSFKKMVETQSGQNXKVLXTDNGGEYISKEFNVFCQEAGIVHQLTAPYSPQQNG 695

Query: 181  VSERKNRTVMETARSMLMEKGLPKSFWAEAVSTAVYLLNRCPTKAVQDKTPVEAWSRRKP 360
            VSERKN+TVME AR ML EK LPK  WAEAV+T+VYLLNR PTK+VQ KTP++AWS  KP
Sbjct: 696  VSERKNKTVMEMARCMLFEKKLPKLLWAEAVNTSVYLLNRLPTKSVQSKTPIKAWSGVKP 755

Query: 361  SAKHLRVFGCICYVHIPQQKRSKLDEKTEKCIFLGYSTQSKGYRVYSLSTRKLIISRDVM 540
            S KHL+VFG  CY+H+P  KR KLDE+ EK +F+GY+ +SKGYR+YSLS  K++ISRDV 
Sbjct: 756  SVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVFVGYAAESKGYRIYSLSRMKIVISRDVH 815

Query: 541  FDEDAAYNWETNQVEKRSINLPKLTHEQ-EETSNDPPETPERAXXXXXXXXXXXXXXXXR 717
            FDE++ +NW+  +V K     P +     E T  + P   E                  R
Sbjct: 816  FDENSYWNWDLKKVHKCDQTTPSILEPAIESTIIEGPLDVEATSDTPVLKM--------R 867

Query: 718  SLREIYQTCNLTIMEPDSYEAAAKQEVWVKAXXXXXXXXXXNETWELTDLPQDKEAIGVK 897
             L ++Y+ CNL   EP  Y  AA+   W++A          N TW+LT+LP+ K AIGVK
Sbjct: 868  PLSDVYERCNLVHAEPTCYTEAARFLEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGVK 927

Query: 898  WVYKTKLNPDGSVQKYKARLVAKGYAQQYGIDYSETFAPVARLDTIRALIALAAQKQWKI 1077
            WV++TK N DGS+ ++KARLV KG+AQ  G+DY +TFAPVAR DTIR L+ALA Q  WK+
Sbjct: 928  WVFRTKFNSDGSIFRHKARLVVKGFAQVAGVDYGDTFAPVARHDTIRLLLALAGQMGWKV 987

Query: 1078 YQLDVKFAFLNGYLEEEIYVEQPQGFVVQGKEDKVLRLKKALYGLKQAPRAWYSRIDDYF 1257
            Y LDVK AFLNG L EEIYV+QP+GF V G E KV +L KALYGLKQAPRAWYSRID + 
Sbjct: 988  YHLDVKSAFLNGILLEEIYVQQPEGFEVIGHEHKVYKLHKALYGLKQAPRAWYSRIDSHL 1047

Query: 1258 TELGFRRSQSEPTLYIKTQGTNNTLIVSLYVDDLIFTGNNENMIMEFKEDMMKTFEMTDL 1437
             +LGFRRS++E TLY+K       L+VSLYVDD++ TG+N  ++ +FK +M   FEM+DL
Sbjct: 1048 IQLGFRRSENEATLYLKQNDDGLQLVVSLYVDDMLVTGSNVKLLADFKMEMQDVFEMSDL 1107

Query: 1438 GLMHYFLGIEIHQRKDGIFISQKKYAESLLKRFKMEGCKTVATPLDNNKALKKEDGSPKA 1617
            G+M+YFLG+EI+Q   GIFISQ+KYA  +LK+FK+E CK VATPL  N+ + K DG    
Sbjct: 1108 GIMNYFLGMEIYQCSWGIFISQRKYAMDILKKFKLESCKEVATPLAQNEKISKNDGEKLE 1167

Query: 1618 DNSQFRSLIGSLLYLTATRPDIMYATSFLSRFMQNPSQIHYGAAKRVLRYLEGTKNYGIW 1797
            + S +RSL+GSLLYLT TRPD+M+ TS LSRF+ +PS +H G +KRVL+Y++GT N GIW
Sbjct: 1168 EPSAYRSLVGSLLYLTVTRPDLMFPTSLLSRFLSSPSNVHMGVSKRVLKYVKGTTNLGIW 1227

Query: 1798 YEPVTNSKLIGYTDSDWAGSIDDMKSTSGYAFTLGSEIFSWASKKQATVAQSSAEAEYIA 1977
            Y      KL GY DSDWAGS+DDMKSTS Y FT+GS +  W S+KQ  VAQS+ EAEYI+
Sbjct: 1228 YLKTVGVKLDGYADSDWAGSVDDMKSTSSYVFTIGSGVICWNSRKQEVVAQSTTEAEYIS 1287

Query: 1978 AAMTTSQAIWLKRILEDMGEVQEKATKIFCDSKSAIAMAKNPVFHNRTKHIKIKYHFIRE 2157
             A   +QAIWL+++L D+G+ Q   T+++CD+KSAI++ +NPV H RTKHI +K+H IRE
Sbjct: 1288 LAAAANQAIWLRKLLADLGQEQTSPTELYCDNKSAISITQNPVQHGRTKHINVKFHSIRE 1347

Query: 2158 AEANSEIELEHCKTDEQLADIFTKALPRGKFEILR 2262
            AE NS ++L +C TDEQLADI TK LP+ + E LR
Sbjct: 1348 AEKNSLVKLHYCSTDEQLADIMTKGLPKSRLEFLR 1382