BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00006423
         (1230 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_010675350.1| PREDICTED: uncharacterized protein LOC104891...   319   e-103
emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]   317   6e-95
gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposo...   302   1e-93
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]   315   1e-93
dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subt...   303   3e-91
gb|KYP65916.1| Retrovirus-related Pol polyprotein from transposo...   290   2e-90
gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposo...   291   8e-90
gb|KYP41992.1| Retrovirus-related Pol polyprotein from transposo...   285   1e-88
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   301   4e-88
emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa]                        300   5e-88
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]   301   6e-88
dbj|GAU27529.1| hypothetical protein TSUD_29610 [Trifolium subte...   294   9e-86
gb|PKA55903.1| Retrovirus-related Pol polyprotein from transposo...   278   4e-85
gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group...   291   2e-84
gb|ABA99612.1| retrotransposon protein, putative, unclassified [...   280   7e-81
gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposo...   278   6e-80
gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposo...   278   6e-80
gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposo...   277   1e-79
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]   277   1e-79
ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabid...   272   5e-79

>ref|XP_010675350.1| PREDICTED: uncharacterized protein LOC104891365 [Beta vulgaris subsp.
            vulgaris]
          Length = 326

 Score =  319 bits (817), Expect = e-103
 Identities = 159/342 (46%), Positives = 216/342 (63%), Gaps = 3/342 (0%)
 Frame = +1

Query: 154  MSRFSNQSLEQTFQVKTNISEK-ENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXA 330
            M RF+ QSLEQ FQ K   S   ENK   ++  Q  ++Y                     
Sbjct: 1    MRRFTEQSLEQAFQAKLKFSNNGENKNGYDKNFQRGTSYNRGRRRGNYK----------- 49

Query: 331  FNQ-RNSNQNSDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSE 507
             NQ    N  S  YC +C+KN H+T+DCR KC RCR   H ++D W +      EAN +E
Sbjct: 50   -NQVTRENNQSGSYCNLCKKNGHNTQDCRSKCNRCRKHTHFEKDRWFRQK---EEANFAE 105

Query: 508  EKEP-NQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRK 684
             KEP +Q+F++CLN+ Q+  ++WY+DSGCSNHM GNK  FV+LDE+  +++ LGDG +++
Sbjct: 106  NKEPKDQLFYTCLNAHQESNDLWYIDSGCSNHMTGNKNSFVSLDENIKTQITLGDGSNQE 165

Query: 685  ITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKN 864
            + GKG I V+ R      I  VFYVP L QNLLSVGQL+++ Y V+F+ + C+I DK+K 
Sbjct: 166  LAGKGTIVVRARNDSSKFIHKVFYVPRLAQNLLSVGQLMQRSYMVKFDANKCLIFDKRKG 225

Query: 865  LTMAKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFG 1044
              +   +M+  KIFPL + L   +AL S  + E  LWHLR+GHL++  L LLK+K MV G
Sbjct: 226  QLITNTQMAPTKIFPLRMQLEHNVALSSMVD-ESILWHLRFGHLNFNSLKLLKRKEMVTG 284

Query: 1045 LPNIPDRDKTCEGCIFGKMHRLPFPKISYRAKAPLEIVHADI 1170
            LP I +  K CEGCI+G+MHRLPFP  S+RA+APLE+VHAD+
Sbjct: 285  LPPISNERKICEGCIYGEMHRLPFPTSSWRARAPLELVHADL 326


>emb|CAN79116.1| hypothetical protein VITISV_002093 [Vitis vinifera]
          Length = 1109

 Score =  317 bits (812), Expect = 6e-95
 Identities = 179/412 (43%), Positives = 243/412 (58%), Gaps = 2/412 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I D+ +V KVLRSL  KF+H+VA IEESKDLST S DELMGSL++ E R+SR   ++ 
Sbjct: 121  EDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEXRLSRTXEKNE 180

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E+TF  K    E  ++K+G +E    +                        +QR S + S
Sbjct: 181  EKTFYTK---GETSDQKNGGREA---TGRGRGRGGAHGRGGRXRGRGDAQGDQRQSTEKS 234

Query: 361  DLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQVFFSC 540
                    K+N        +C  C+   H Q +CW K+  +  +AN  E++E     F  
Sbjct: 235  R------NKSN-------IQCYYCKRFGHVQAECWKKERQE-KQANYVEQEEDQVKLFMA 280

Query: 541  LNSQ-QQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAVQT 717
             N +     NIW++DSGCSNHM G K +F  LDES+  +V+LGD K   + GKG +AV  
Sbjct: 281  YNEEVVXSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGTVAVNN 340

Query: 718  REGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSN 897
              G + ++ +V+++P LTQNLLSVGQL+   Y + F+   C+I DK+ +  +  ++M++N
Sbjct: 341  GHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGSTCVIKDKKFDQIIVDVRMAAN 400

Query: 898  KIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTC 1077
            K+FPL +   EK AL     +E NLWHLRYGHL+ KGL LL KK MVFGLP I D    C
Sbjct: 401  KLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVC 459

Query: 1078 EGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            EGCI+GK  + PFPK  S RA + LEI+HAD+CGP Q  S   +RYFLLF D
Sbjct: 460  EGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQIASFGGSRYFLLFTD 511


>gb|KYP41330.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 604

 Score =  302 bits (774), Expect = 1e-93
 Identities = 167/419 (39%), Positives = 251/419 (59%), Gaps = 9/419 (2%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I DKKIVEKVL S+P K++ IV +IE++KDLSTLS+ ELMGSLEA E+R++R    S 
Sbjct: 74   ENILDKKIVEKVLISVPRKYDPIVTIIEQTKDLSTLSVTELMGSLEAYEQRLNRHDEDST 133

Query: 181  EQTFQVKTNI--SEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQ 354
            E  FQ K  +    K+ + +GE  R   +                        N   + Q
Sbjct: 134  ENAFQSKLKLRSQNKDKRNNGETSRNKENCR----------------------NFSRNYQ 171

Query: 355  NSDLYCRICRKNNHDTKDCRFK----CKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPN 522
            N    C IC++ NH  KDCR++    C+ C+   H ++ C +K   + ++AN +EEK   
Sbjct: 172  NEYPPCGICKRTNHAEKDCRYRGKPQCRHCKKFGHVEKYCRNK---NKHQANFAEEKNGE 228

Query: 523  Q-VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKG 699
            Q +F++  +S  +    WY+DSGCSNHM  +  +F ++DES   +VR+G+    +  GKG
Sbjct: 229  QHLFYATQDSNSETSGSWYLDSGCSNHMAKDASIFKDIDESVKVKVRMGNDIVVESKGKG 288

Query: 700  EIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAK 879
             + V+T++G   +I DV  VP+L +NLLS+GQ++EK Y + F  D C I D +K L + +
Sbjct: 289  TVMVETKKG-TRLITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKK-LEIGR 346

Query: 880  IKMSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNI 1056
            +KM   N+ FP++L     IA+++  + +  LWH R+GH +   L LL +KNM+  LP +
Sbjct: 347  VKMEKRNRSFPISLRQGPNIAMKAEVD-DSWLWHRRFGHFNTHALKLLYQKNMMRDLPCL 405

Query: 1057 PDRDKTCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
             +  + CEGC+ GK HRLPF    ++R K  LE++H DICGP +T SL++NRYF+LF+D
Sbjct: 406  KENSEACEGCLLGKQHRLPFSTGKAWRVKDLLELIHIDICGPMRTSSLHNNRYFILFID 464


>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score =  315 bits (808), Expect = 1e-93
 Identities = 175/412 (42%), Positives = 238/412 (57%), Gaps = 4/412 (0%)
 Frame = +1

Query: 7    IEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSLEQ 186
            I D+ +V KVLRSL  KF+H+VA IEESKDLST S DELMGSL++ E R+SR   ++ E+
Sbjct: 137  ILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSRTEEKNEEK 196

Query: 187  TFQVKTNISEKEN--KKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
             F  K   S+++N  ++   + R    A+                      N+  SN   
Sbjct: 197  AFYTKGETSDQKNGGREATGRGRGRGGAHGRGGRGRGRGDAQGYQRQSTEKNRNKSN--- 253

Query: 361  DLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQVFFSC 540
                               +C  C+   H Q +CW K+  +  +AN  E++E     F  
Sbjct: 254  ------------------IQCYYCKRFGHVQXECWKKERQE-KQANYVEQEEDQVKLFMX 294

Query: 541  LNSQ-QQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAVQT 717
             N +     NIW++DSGCSNHM G K +F  LDES+  +V+LGD K   + GKG +AV  
Sbjct: 295  YNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVXVEGKGIMAVNN 354

Query: 718  REGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSN 897
              G + ++ +V+++P LTQNLLSVGQL+   Y + F+   C+I DK+ +  +  ++M++N
Sbjct: 355  GHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVNVRMAAN 414

Query: 898  KIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTC 1077
            K+FPL +   EK AL     +E NLWHLRYGHL+ KGL LL KK MVFGLP I D    C
Sbjct: 415  KLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVC 473

Query: 1078 EGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            EGCI+GK  + PFPK  S RA + LEI+HAD+CGP QT S   +RYFLLF D
Sbjct: 474  EGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTD 525


>dbj|GAU35153.1| hypothetical protein TSUD_217860 [Trifolium subterraneum]
          Length = 858

 Score =  303 bits (775), Expect = 3e-91
 Identities = 164/427 (38%), Positives = 256/427 (59%), Gaps = 17/427 (3%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            D I DK+IVEK+L S+P K++ IV  IE++KDLSTLS+ EL+GSLEA E+R++R  + ++
Sbjct: 152  DNILDKRIVEKILISIPRKYDVIVTTIEQTKDLSTLSVTELIGSLEAYEQRLNRHDDNTI 211

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E  FQ K  +  ++ +   ++  + NS                        N RN ++ +
Sbjct: 212  ENAFQSKLKLRSQDKRYGVKKNGRENSRNEE--------------------NSRNFSKKN 251

Query: 361  DLY--CRICRKNNHDTKDCRFK----CKRCRNANHSQRDCWHKDDGDTNEANLSEEKE-- 516
              Y  C IC++ NH  K CR++    C+ C+   H +++C+ K   + ++AN  EE E  
Sbjct: 252  QEYPPCGICKRTNHAEKYCRWRGKEQCQHCKKFGHLEKNCYSK---NKHQANFVEEHECE 308

Query: 517  ------PNQVFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKS 678
                    Q+F++  +S   +   WY+DSGCSNHM  ++ +F ++D+S   +VRLG+G  
Sbjct: 309  KDQHDYEQQLFYATQDSNDDLSKNWYLDSGCSNHMAKDESIFKDIDDSVKVKVRLGNGTI 368

Query: 679  RKITGKGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIID-K 855
             +  GKG + V+T++G    IKDV  VP+L +NLLS+GQ++EK Y + F  D C I D  
Sbjct: 369  VESKGKGTVMVETKKG-TRFIKDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCSIYDNS 427

Query: 856  QKNLTMAKIKMSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKN 1032
             K   +AK+KM   N+ FP++   T  IAL+   + +  LWH R+GH + + L +L +KN
Sbjct: 428  HKRHEIAKVKMEKRNRSFPISFKYTTNIALKVQVD-DSWLWHRRFGHFNTQALKMLYQKN 486

Query: 1033 MVFGLPNIPDRDKTCEGCIFGKMHRLPFP-KISYRAKAPLEIVHADICGPTQTPSLNDNR 1209
            M+  LP + +  + CEG + GK HRL FP + ++R K  LE++H ++CGP +TPSLN+NR
Sbjct: 487  MMRNLPYLKENSEACEGYLLGKQHRLAFPTRETWRTKYVLELIHTNVCGPMRTPSLNNNR 546

Query: 1210 YFLLFVD 1230
            YF+LF+D
Sbjct: 547  YFILFID 553


>gb|KYP65916.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 464

 Score =  290 bits (741), Expect = 2e-90
 Identities = 160/417 (38%), Positives = 243/417 (58%), Gaps = 7/417 (1%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I DKKIVEK++ S+P K++ I+  IE+ KDLSTLS+ ELMGSLEA E+R++R    S+
Sbjct: 26   ENILDKKIVEKIIISVPRKYDPIMTTIEQIKDLSTLSVTELMGSLEAYEQRLNRHDEDSI 85

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E  FQ K  +  K+N ++    R Y + Y                               
Sbjct: 86   ENAFQSKLKLRNKDNSRN--FSRNYQNEYPP----------------------------- 114

Query: 361  DLYCRICRKNNHDTKDCRF----KCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQ- 525
               C IC++ N   KDCR+    +C+ C    H ++ C +K   + ++AN +EEK   Q 
Sbjct: 115  ---CDICKRTNLAEKDCRYHGKPQCRHCNKVRHVKKYCRNK---NKHQANFAEEKNGEQH 168

Query: 526  VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEI 705
            +F++  +S  +    WY+DSGCSNHM  +  +F ++DES   +VR+G+    +  GKG +
Sbjct: 169  LFYATQDSNSETSGNWYLDSGCSNHMAKDASIFKDIDESVKVKVRMGNDTVVESKGKGTV 228

Query: 706  AVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIK 885
             V+T++G M +I DV  VP+L +NLLS+GQ++EK Y + F  D C I D +K L + ++K
Sbjct: 229  MVETKKG-MRLITDVILVPNLKENLLSIGQMMEKGYTLHFEGDSCKIYDNKK-LEIGRVK 286

Query: 886  MSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPD 1062
            M   N+ FP++L      A+++  + +  LWH R+GH +   LNLL KKNM+  LP + +
Sbjct: 287  MEKRNRSFPISLRQGLNFAMKAEVD-DSWLWHQRFGHFNTHALNLLYKKNMMRDLPCLKE 345

Query: 1063 RDKTCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
              + CEGC  GK HRLPF    ++ AK  LE++H +ICGP +  S ++NRYF+LF+D
Sbjct: 346  NSEACEGCFLGKQHRLPFSTGKAWSAKDLLELIHTNICGPMRASSFHNNRYFILFID 402


>gb|KYP33156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 570

 Score =  291 bits (746), Expect = 8e-90
 Identities = 162/419 (38%), Positives = 249/419 (59%), Gaps = 9/419 (2%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I DKKIVEK+L S+  K++ IV  IE++KDLSTLS+ ELMG LEA E+R++R    S 
Sbjct: 6    ENILDKKIVEKILISVSRKYDPIVTTIEQTKDLSTLSVIELMGLLEAYEQRLNRHDEDST 65

Query: 181  EQTFQVKTNI--SEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQ 354
            E  FQ K  +    K+ + +GE  R   ++                       N   + Q
Sbjct: 66   ENAFQSKLKLRSQNKDKRNNGETSRNKENSR----------------------NFSRNYQ 103

Query: 355  NSDLYCRICRKNNHDTKDCRF----KCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPN 522
            N    C IC++ NH  +DCR+    +C+ C    H ++ C +K   + ++AN +EEK   
Sbjct: 104  NEYPPCGICKRTNHAEQDCRYHGKPQCRHCNKVGHVEKYCRNK---NKHQANFAEEKNGE 160

Query: 523  Q-VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKG 699
            Q +F++  +S  +    WY+DSGC+NHM  +  +F ++DES   +VR+G+    +  GKG
Sbjct: 161  QHLFYATQDSNSETSGNWYLDSGCNNHMAKDASIFKDIDESVKVKVRMGNDIVVESKGKG 220

Query: 700  EIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAK 879
             + V+T++G   +I DV  VP+L +NLLS+GQ++EK Y + F  D C I D +K L + +
Sbjct: 221  TVMVETKKG-TRLITDVLLVPNLKENLLSIGQMMEKGYTLHFEGDTCKIYDNKK-LEIGR 278

Query: 880  IKMSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNI 1056
            +KM   N+ FP++L     IA+++  + +  LWH R+GH +   L LL +KNM+  LP +
Sbjct: 279  VKMEKRNRSFPISLRQGPNIAMKAEVD-DSWLWHRRFGHFNTHALKLLYQKNMMRDLPCL 337

Query: 1057 PDRDKTCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
             +  + CEGC+ GK HRLPF    ++RAK  LE++H +ICGP +T SL++NRYF+LF+D
Sbjct: 338  KENSEACEGCLLGKQHRLPFSTGKAWRAKDLLELIHTNICGPMRTSSLHNNRYFILFID 396


>gb|KYP41992.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 465

 Score =  285 bits (730), Expect = 1e-88
 Identities = 160/417 (38%), Positives = 239/417 (57%), Gaps = 7/417 (1%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I DKKIVEK+L S+P K++ IV  IE++KDLSTLS+ EL+GSLEA E+R++R    S 
Sbjct: 26   ENILDKKIVEKILISVPRKYDPIVTTIEQTKDLSTLSVTELIGSLEAYEQRLNRHDEDST 85

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E  FQ K  +  KEN ++    R Y + Y                               
Sbjct: 86   ENAFQSKLKLRNKENSRN--FSRNYQNEYPP----------------------------- 114

Query: 361  DLYCRICRKNNHDTKDCRFK----CKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQ- 525
               C IC + NH  KDCR++    C+ C    H ++ C +K   + ++ N  EE +  Q 
Sbjct: 115  ---CGICNRTNHAEKDCRYRGKPQCRHCNKVGHVEKYCRNK---NKHQVNFVEEIDGEQH 168

Query: 526  VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEI 705
            +F++  +S  +    WY+DSG SNHM  +  +F ++DES   +VR+G+    +  GKG +
Sbjct: 169  LFYASQDSNSETSGSWYLDSGYSNHMAKDASIFKDIDESVKVKVRMGNDTIVESKGKGTV 228

Query: 706  AVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIK 885
             V+T++G   +I DV  VP+L +NLLS+ Q++EK Y + F  D C I D +K L   ++K
Sbjct: 229  MVETKKG-TRLITDVLLVPNLKENLLSISQMMEKSYTLHFEGDTCKIYDNKK-LENGRVK 286

Query: 886  MSS-NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPD 1062
            M   N+ FP+++     IA++   + +  LWH R+GH +   L LL +KNM+  LP + +
Sbjct: 287  MEKRNRSFPISMRQDPNIAMKIEVD-DSWLWHRRFGHFNMHALKLLYQKNMMRDLPCLKE 345

Query: 1063 RDKTCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
              + CEGC+ GK HRLPF    ++RAK  LE++H DICGP  T SL++NRYF+LF+D
Sbjct: 346  NSEACEGCLLGKQHRLPFSTGKAWRAKDLLELIHTDICGPMWTSSLHNNRYFILFID 402


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  301 bits (770), Expect = 4e-88
 Identities = 171/412 (41%), Positives = 235/412 (57%), Gaps = 2/412 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I+++ +V KVLRSL  KFEH+V  IEESKDLST S DELM SL A E R++R   +  
Sbjct: 145  EKIDNQIVVSKVLRSLTTKFEHVVTAIEESKDLSTYSFDELMSSLLAHEDRLNRSREKVQ 204

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E+ FQVK   S K     G+ E      +                      + R  NQ  
Sbjct: 205  EKAFQVKGEFSYK-----GKAENSAGRGHGRGNFRGRGRGG----------SGRGRNQVG 249

Query: 361  DLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEE-KEPNQVFFS 537
            +   R  + N         +C+ C+   H + DCW K   +  +AN ++  +E +++F +
Sbjct: 250  EF--RQYKSN--------IQCRYCKKFGHKEVDCWTKQKDEQKDANFTQNVEEESKLFMA 299

Query: 538  CLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAVQT 717
                 +    +W++DSGCSNHM  +K +F +LDES  SEVRLGD K   I GKG + ++T
Sbjct: 300  SSQITESANAVWFIDSGCSNHMSSSKSLFRDLDESQKSEVRLGDDKQVHIEGKGTVEIKT 359

Query: 718  REGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSN 897
             +G +  + DV YVP L  NLLSVGQL+   Y V F ++ C I DK+   T+A++ M+ N
Sbjct: 360  VQGNVKFLYDVQYVPTLAHNLLSVGQLMTSGYSVVFYDNACDIKDKESGRTIARVPMTQN 419

Query: 898  KIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTC 1077
            K+FPL++      AL    + E NLWHLRYGHL+   L LL +K+MV GLPNI + D  C
Sbjct: 420  KMFPLDISNVGNSALVVKEKNETNLWHLRYGHLNVNWLKLLVQKDMVIGLPNIKELD-LC 478

Query: 1078 EGCIFGKMHRLPFP-KISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            EGCI+GK  R  FP   S+RA   LE+VHAD+CGP +  SL  +RYFL+F D
Sbjct: 479  EGCIYGKQTRKSFPVGKSWRATTCLELVHADLCGPMKMESLGGSRYFLMFTD 530


>emb|CAH66391.1| OSIGBa0134J07.9 [Oryza sativa]
          Length = 1314

 Score =  300 bits (769), Expect = 5e-88
 Identities = 163/414 (39%), Positives = 244/414 (58%), Gaps = 4/414 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I D+K+VEK+L SLP K+E+IVA IEESKDLSTL++ +LM SLE+ E+R  +    S+
Sbjct: 146  EDINDQKVVEKILISLPEKYEYIVAAIEESKDLSTLTIQQLMSSLESHEERKLQREGSSI 205

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E  FQ K +   + ++  G  ++   + +                       +  S  +S
Sbjct: 206  ENAFQSKLSFRPQNSRFRGNFQK---NGFPMRDRGYFQKNGFSTQKEDGQERREKSTSSS 262

Query: 361  DLYCRICRKNNHDTKDC--RFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPN-QVF 531
            +L+C I +K++H T  C  +  C +C+   H  + C  +   + N AN S+EKE + ++ 
Sbjct: 263  NLWCDISQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTR---EINRANFSQEKEKSEEMV 319

Query: 532  FSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAV 711
            FSC  +Q++ +++W +DSGC+NHM  +  +F  +D  Y +++ +G+G   +  GKG +AV
Sbjct: 320  FSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSLYHAKIHMGNGSIAQSEGKGTVAV 379

Query: 712  QTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMS 891
            QT +G    IKDV  VPDL QNLLS+GQLLE  Y V F +  C I+D++ N  +AKI M 
Sbjct: 380  QTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINME 438

Query: 892  SNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDK 1071
             N+ F L +  T ++AL+S  +   +LWH R GHL+Y+ L LL+ K MV GLP I  +  
Sbjct: 439  KNRNFLLRMNHTTQMALRSEVDIS-DLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSD 497

Query: 1072 TCEGCIFGKMHRLPFPKI-SYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
             CEGC+FGK  +  FP   ++RA AP E+VH DI G   T S   N YF+ F+D
Sbjct: 498  PCEGCVFGKQIQASFPHSGAWRASAPFELVHTDIVGKVPTMSEGGNWYFITFID 551


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score =  301 bits (771), Expect = 6e-88
 Identities = 172/412 (41%), Positives = 233/412 (56%), Gaps = 2/412 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I D+ +V KVLRSL  KF+H+VA IEESKDLST S DELMGSL++ E R+SR   ++ 
Sbjct: 148  EDILDQTVVAKVLRSLTPKFDHVVAAIEESKDLSTYSFDELMGSLQSHEVRLSRTEEKNE 207

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E+ F  K   S                                        +Q+N  + +
Sbjct: 208  EKXFYTKGETS----------------------------------------DQKNGGREA 227

Query: 361  DLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQVFFSC 540
                R C +     +       R R    +Q +CW K+  +  +AN  E++E     F  
Sbjct: 228  T--GRGCGRGGAHGRG-----GRGRGRGDAQXECWKKERQE-KQANYVEQEEDQVKLFMA 279

Query: 541  LNSQQ-QIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAVQT 717
             N +     NIW++DSGCSNHM G K +F  LDES+  +V+LGD K  ++ GKG  AV  
Sbjct: 280  YNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLKVKLGDDKQVQVEGKGTXAVNN 339

Query: 718  REGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSN 897
              G + ++ +V+++P LTQNLLSVGQL+   Y + F+   C+I DK+ +  +  ++M++N
Sbjct: 340  GHGNVKLLYNVYFIPSLTQNLLSVGQLMVSGYSILFDGATCVIKDKKSDQIIVBVRMAAN 399

Query: 898  KIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTC 1077
            K+FPL +   EK AL     +E NLWHLRYGHL+ KGL LL KK MVFGLP I D    C
Sbjct: 400  KLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFGLPKI-DSVNVC 458

Query: 1078 EGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            EGCI+GK  + PFPK  S RA + LEI+HAD+CGP QT S   +RYFLLF D
Sbjct: 459  EGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTD 510


>dbj|GAU27529.1| hypothetical protein TSUD_29610 [Trifolium subterraneum]
          Length = 1263

 Score =  294 bits (752), Expect = 9e-86
 Identities = 158/416 (37%), Positives = 242/416 (58%), Gaps = 6/416 (1%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            D I +K +VEK++R+L  +F+++VA IEE K+++T++L++L  SLE+RE RM+  SN + 
Sbjct: 130  DDINEKYVVEKIMRTLSTRFDYVVAAIEEGKNVTTMTLNDLQASLESREMRMNERSNGTF 189

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQN- 357
            EQ  + +TN+     + +G  +R+ N  Y                          S QN 
Sbjct: 190  EQALKAQTNV-----RNEGPVQRRSN--YFQRGHSSKGTWRNSQTDLSQNTRGNGSFQNK 242

Query: 358  SDLYCRICRKNNHDTKDCR--FKCKRCRNANHSQRDCWHK--DDGDTNEANLSEEKEPNQ 525
            S++ C  C+K  H   +CR   +C  C+   H  R+C  K  +  D++      E +   
Sbjct: 243  SNIQCHKCQKYGHFQSECRSHIQCLNCKKYGHYARECCAKLLNIRDSHARVAEIEDDMKM 302

Query: 526  VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEI 705
            V  +C     + ++ W +D+GCSNH+ GNK++F NLDES+ S V+LGD    ++ GKG+I
Sbjct: 303  VLTTCHVIADKNDDQWLLDTGCSNHLSGNKELFSNLDESFRSIVKLGDNSKLQVLGKGKI 362

Query: 706  AVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIK 885
            A++ ++G +N I DVFYVP + QNLLSVGQL EK Y + FN   C I D +  L +AK  
Sbjct: 363  AIRLKDGSLNYISDVFYVPSICQNLLSVGQLAEKGYDLNFNKSGCTINDAEMGL-IAKTS 421

Query: 886  MSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDR 1065
            MS N++FP+N+     +  ++    ++ LWH+R GH +++ +  L  K  V GLP I   
Sbjct: 422  MSWNRLFPMNIKYDADMCCKAIAIDDNWLWHMRLGHFNFESIKFLANKKWVTGLPVIQVP 481

Query: 1066 DKTCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            DK CE C+ GK HR PFPK  ++RA  PLE+VH+D+C   + PS   N+YF+ F+D
Sbjct: 482  DKLCEACVVGKKHRDPFPKGKAWRATIPLELVHSDLC-YVEVPSNGGNKYFITFID 536


>gb|PKA55903.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 522

 Score =  278 bits (711), Expect = 4e-85
 Identities = 163/413 (39%), Positives = 231/413 (55%), Gaps = 3/413 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + +ED  IVEK+LRSL  KF+++V  IEESKD+   SLDEL  SL   E++M+R S+ S 
Sbjct: 126  EKMEDVTIVEKILRSLTPKFDYVVCSIEESKDIDAFSLDELQSSLLVHEQKMNR-SSTSE 184

Query: 181  EQTFQVKTNISEKENKKDGE-QERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQN 357
            EQ   +KT+IS   +   G  + R     Y                        R    N
Sbjct: 185  EQA--LKTSISTHFSSSRGRGRGRGRGRGYRGNGD-----------------GSRPLKAN 225

Query: 358  SDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTN-EANLSEEKEPNQVFF 534
             D +    R  N      + +C RC    H + +C+ +   D   +++ +EEKE   +  
Sbjct: 226  DDQFQGKGRGLNQHFDKSKVECFRCHKYGHYRSECYTRLPKDREKQSHFTEEKEVETLLM 285

Query: 535  SCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAVQ 714
            +   +Q+   ++WYVD+GCSNHMCG+K +F NL+E++ S V  GD  + K+ GKG+I + 
Sbjct: 286  AVQANQESESDVWYVDTGCSNHMCGSKSLFSNLNEAFHSTVSFGDCSTVKVMGKGDINII 345

Query: 715  TREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSS 894
            T+ G +  I +VFYVPDL  NLLS GQL EKDY +      C I D  +   +A ++MSS
Sbjct: 346  TKNGFVETIFNVFYVPDLKSNLLSAGQLQEKDYVITIKKGACEIYDPSRG-AIAVVQMSS 404

Query: 895  NKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKT 1074
            N +FPL +  T +  L +  +    +WHLRY HL++ GL  L++K+MV GLP I    + 
Sbjct: 405  NWLFPLKI-TTSQPCLNAEVKDHSWIWHLRYDHLNFGGLKTLQQKDMVIGLPQIVIPSQV 463

Query: 1075 CEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            CE CI GK HR PFP+  S+RAK  LE+VH+DICGP    S    RYF+ F+D
Sbjct: 464  CEECIIGKQHRSPFPQGKSWRAKTVLELVHSDICGPINPYSNGGKRYFITFID 516


>gb|AAP46257.1| putative polyprotein [Oryza sativa Japonica Group]
 gb|ABF99717.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1335

 Score =  291 bits (744), Expect = 2e-84
 Identities = 162/414 (39%), Positives = 239/414 (57%), Gaps = 4/414 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I D+K+VEK+L SLP K+E+IVA  EESKDLS         SLE+ E+R  +    S+
Sbjct: 146  EDINDQKVVEKILISLPEKYEYIVAATEESKDLSK-------DSLESHEERKLQREGSSI 198

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E  FQ K +   + ++  G  ++   + +                       +     +S
Sbjct: 199  ENAFQSKLSFRPQNSRFRGNFQK---NGFPMRDRGYFQKNGFSRQKEDGQERREKGTSSS 255

Query: 361  DLYCRICRKNNHDTKDC--RFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQ-VF 531
            +L+C IC+K++H T  C  +  C +C+   H  + C  ++    N AN S+EKE ++ + 
Sbjct: 256  NLWCDICQKSSHTTDMCWKKMTCNKCKRKGHIAKYCRTRE---INRANFSQEKEKSEEMV 312

Query: 532  FSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAV 711
            FSC  +Q++ +++W +DSGC+NHM  +  +F  +D SY +++ +G+G   +  GKG +AV
Sbjct: 313  FSCHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAV 372

Query: 712  QTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMS 891
            QT +G    IKDV  VPDL QNLLS+GQLLE  Y V F +  C I+D++ N  +AKI M 
Sbjct: 373  QTADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINME 431

Query: 892  SNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDK 1071
             N+ F L +  T ++AL+S  +   +LWH R GHL+Y+ L LL+ K MV GLP I  +  
Sbjct: 432  KNRNFLLRMNHTTQMALRSEVDIS-DLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSD 490

Query: 1072 TCEGCIFGKMHRLPFPKI-SYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
             CEGC+FGK  R  FP   ++RA APLE+VHADI G   T S   N YF+ F+D
Sbjct: 491  PCEGCVFGKQIRASFPHSGAWRASAPLELVHADIVGKVPTISEGGNWYFITFID 544


>gb|ABA99612.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1198

 Score =  280 bits (715), Expect = 7e-81
 Identities = 159/412 (38%), Positives = 231/412 (56%), Gaps = 2/412 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I D+K+VEK+L SLP K+E+IVA IEESKD+ TL++ +LM SLE+ E+R  +    S+
Sbjct: 109  EDINDQKVVEKILISLPEKYEYIVAAIEESKDMLTLTIQQLMSSLESHEERKLQREGSSI 168

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            E  FQ K +             R  NS +                     F+++  +   
Sbjct: 169  ENAFQSKLSF------------RPQNSRFRGNFQKNEFPMRDRGYFQKNGFSRQKEDGQE 216

Query: 361  DLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQ-VFFS 537
                 +C K        +  C +C+   H  + C  ++    N AN S+EKE ++ + FS
Sbjct: 217  RREKDMCWK--------KMTCNKCKRKGHIAKYCRTRE---INRANFSQEKEKSEEMVFS 265

Query: 538  CLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAVQT 717
            C  +Q++ +++W +DSGC+NHM  +  +F  +D SY +++ +G+G   +  GKG +AVQT
Sbjct: 266  CHTAQEEKDDVWVIDSGCTNHMAADPNLFREMDSSYHAKIHMGNGSIAQSEGKGTVAVQT 325

Query: 718  REGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMSSN 897
             +G    IKDV  VPDL QNLLS+GQLLE  Y V F +  C I+D++ N  +AKI M  N
Sbjct: 326  ADGP-KFIKDVLLVPDLKQNLLSIGQLLEHGYAVYFEDFSCKILDRKNNRLVAKINMEKN 384

Query: 898  KIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDKTC 1077
              F L +    ++AL+S  +   +LWH R GHL+Y+ L LL+ K MV GLP I  +   C
Sbjct: 385  INFLLRMNHPTQMALRSEIDIS-DLWHKRMGHLNYRALKLLRTKGMVQGLPFITLKSDPC 443

Query: 1078 EGCIFGKMHRLPFPKI-SYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            EGC+FGK  R  FP   ++RA APLE+VH DI G   T S   N YF+ F+D
Sbjct: 444  EGCVFGKQIRASFPHSGAWRASAPLELVHTDIVGKVPTISEGGNWYFITFID 495


>gb|KYP69041.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  278 bits (711), Expect = 6e-80
 Identities = 154/416 (37%), Positives = 230/416 (55%), Gaps = 6/416 (1%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + ++D +I+EK+LRSL  KFEHIV + EE+KDL  +S+++L+GSL+A E++  +   + +
Sbjct: 150  EKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLGSLQAYEEKKKK-KEEIV 208

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            EQ F+   + S KE     +  R Y+                            N+NQ  
Sbjct: 209  EQVFKAHVD-SRKEENAHNQSRRSYSQEQGRGRAYGHGQGR----------RPNNNNQRG 257

Query: 361  DLYCRICRKNNHDTK--DCRFKCKRCRNANHSQRDCWHKDDGDTNE-ANLSEEK--EPNQ 525
            +   R   + N +++    R KC  C    H   +C   +     E AN +EE+  E   
Sbjct: 258  ESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDGT 317

Query: 526  VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEI 705
            +  +     +  +N WY+DSG SNHMCG + MFV LDES    V  GD     + GKG +
Sbjct: 318  LLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNV 377

Query: 706  AVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIK 885
             ++ + G+   I +V+YVP +  N+LS+GQLLEK Y ++  N++  I D      +AK+ 
Sbjct: 378  LIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRF-IAKVP 436

Query: 886  MSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDR 1065
            M+ N++F LN+       L+   + +  LWHLR+GHL++KGL LL KK MV GLP I   
Sbjct: 437  MTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHP 496

Query: 1066 DKTCEGCIFGKMHRLPFPKIS-YRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            ++ CEGC+ GK  RL FPK S  RA+ PLE++H D+CGP +  SL  + YFLLF+D
Sbjct: 497  NQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFID 552


>gb|KYP44533.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1342

 Score =  278 bits (711), Expect = 6e-80
 Identities = 154/416 (37%), Positives = 230/416 (55%), Gaps = 6/416 (1%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + ++D +I+EK+LRSL  KFEHIV + EE+KDL  +S+++L+GSL+A E++  +   + +
Sbjct: 150  EKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLGSLQAYEEKKKK-KEEIV 208

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            EQ F+   + S KE     +  R Y+                            N+NQ  
Sbjct: 209  EQVFKAHVD-SRKEENAHNQSRRSYSQEQGRGRAYGHGQGR----------RPNNNNQRG 257

Query: 361  DLYCRICRKNNHDTK--DCRFKCKRCRNANHSQRDCWHKDDGDTNE-ANLSEEK--EPNQ 525
            +   R   + N +++    R KC  C    H   +C   +     E AN +EE+  E   
Sbjct: 258  ESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDGT 317

Query: 526  VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEI 705
            +  +     +  +N WY+DSG SNHMCG + MFV LDES    V  GD     + GKG +
Sbjct: 318  LLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNV 377

Query: 706  AVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIK 885
             ++ + G+   I +V+YVP +  N+LS+GQLLEK Y ++  N++  I D      +AK+ 
Sbjct: 378  LIRLKNGEHQFISNVYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRF-IAKVP 436

Query: 886  MSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDR 1065
            M+ N++F LN+       L+   + +  LWHLR+GHL++KGL LL KK MV GLP I   
Sbjct: 437  MTRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLELLSKKAMVRGLPCITHP 496

Query: 1066 DKTCEGCIFGKMHRLPFPKIS-YRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            ++ CEGC+ GK  RL FPK S  RA+ PLE++H D+CGP +  SL  + YFLLF+D
Sbjct: 497  NQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFID 552


>gb|KYP66220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1331

 Score =  277 bits (709), Expect = 1e-79
 Identities = 153/416 (36%), Positives = 229/416 (55%), Gaps = 6/416 (1%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + ++D +I+EK+LRSL  KFEHIV + EE+KDL  +S+++L+GSL+A E++  +   + +
Sbjct: 139  EKLDDVRIMEKILRSLDPKFEHIVTITEETKDLEAMSIEQLLGSLQAYEEKKKK-KEEIV 197

Query: 181  EQTFQVKTNISEKENKKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQNS 360
            EQ F+   + S KE     +  R Y+                            N+NQ  
Sbjct: 198  EQVFKAHVD-SRKEENAHNQSRRSYSQEQGRGRAYGHGQGR----------RPNNNNQRG 246

Query: 361  DLYCRICRKNNHDTK--DCRFKCKRCRNANHSQRDCWHKDDGDTNE-ANLSEEK--EPNQ 525
            +   R   + N +++    R KC  C    H   +C   +     E AN +EE+  E   
Sbjct: 247  ESSNRGRGRGNPNSRYDKSRIKCYNCNKFGHYASECRAPNKNKVEEKANYAEERCQEDGT 306

Query: 526  VFFSCLNSQQQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEI 705
            +  +     +  +N WY+DSG SNHMCG + MFV LDES    V  GD     + GKG +
Sbjct: 307  LLLAYKGQDKGEDNQWYLDSGASNHMCGKRSMFVELDESVKGNVAFGDESKVAVEGKGNV 366

Query: 706  AVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIK 885
             +Q + G+   I +++YVP +  N+LS+GQLLEK Y ++  N++  I D      + K+ 
Sbjct: 367  LIQLKNGEHQFISNIYYVPSMKSNILSLGQLLEKGYDIQLKNNNLSIRDNTSRF-ITKVP 425

Query: 886  MSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDR 1065
            M  N++F LN+       L+   + +  LWHLR+GHL++KGL+LL KK MV GLP I   
Sbjct: 426  MMRNRMFVLNIQSDGPQCLKMCYKDQSWLWHLRFGHLNFKGLDLLSKKAMVRGLPCITHP 485

Query: 1066 DKTCEGCIFGKMHRLPFPKIS-YRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            ++ CEGC+ GK  RL FPK S  RA+ PLE++H D+CGP +  SL  + YFLLF+D
Sbjct: 486  NQVCEGCLLGKQFRLSFPKESDSRAQKPLELIHTDVCGPIKPRSLGKSNYFLLFID 541


>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
          Length = 1430

 Score =  277 bits (709), Expect = 1e-79
 Identities = 164/414 (39%), Positives = 227/414 (54%), Gaps = 4/414 (0%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + I D+ +V KVLRSL  KF+H+VA IEESKDLST S DELMGSL++ E R+S   +++ 
Sbjct: 262  EDILDQTVVAKVLRSLTPKFDHVVAXIEESKDLSTYSFDELMGSLQSHEVRLSXTEDKNE 321

Query: 181  EQTFQVKTNISEKEN--KKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRNSNQ 354
            E+ F  K   S+ +N  ++   + R    A+                      +QR S +
Sbjct: 322  EKXFYTKGETSDXKNGGREXTGRGRGRGGAHGRGGRGRGRGDAQG--------DQRQSTE 373

Query: 355  NSDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNEANLSEEKEPNQVFF 534
             S        K+N         C  C+   H Q +CW K+  +  +AN  E++E     F
Sbjct: 374  KSR------NKSN-------IXCYYCKRFGHVQAECWKKERQE-KQANYVEQEEDQVKLF 419

Query: 535  SCLNSQ-QQIENIWYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITGKGEIAV 711
               N +     NIW++DSGCSNHM G K +F  LDES+   V+LGD    ++ GKG +AV
Sbjct: 420  MAYNEEVVSSNNIWFLDSGCSNHMTGIKSLFKELDESHKLXVKLGDDXQVQVEGKGTVAV 479

Query: 712  QTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTMAKIKMS 891
                G + ++ +V+++P LT+ L+  G                   DK+ +  +  ++M+
Sbjct: 480  NNGHGNVKLLYNVYFIPSLTEKLVKCG----------------ATYDKKSDQIIVDVRMA 523

Query: 892  SNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPNIPDRDK 1071
            +NK+FPL +   EK AL     +E NLWHLRYGHL+ KGL LL KK MVF LP I D   
Sbjct: 524  ANKLFPLEVSSIEKHALVVKETSESNLWHLRYGHLNVKGLKLLSKKEMVFELPKI-DSVN 582

Query: 1072 TCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
             CEGCI+GK  + PFPK  S RA + LEI+HAD+CGP QT S   +RYFLLF D
Sbjct: 583  VCEGCIYGKQSKKPFPKGRSRRASSCLEIIHADLCGPMQTASFGGSRYFLLFTD 636


>ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 961

 Score =  272 bits (695), Expect = 5e-79
 Identities = 161/420 (38%), Positives = 236/420 (56%), Gaps = 10/420 (2%)
 Frame = +1

Query: 1    DTIEDKKIVEKVLRSLPAKFEHIVAVIEESKDLSTLSLDELMGSLEAREKRMSRFSNQSL 180
            + ++D +I+EKVLRSL  KFEHIV VIEE+KDL  +++++L+GSL+A E++  +     +
Sbjct: 150  EKLDDVRIMEKVLRSLDPKFEHIVTVIEETKDLEAMTIEQLLGSLQAYEEKKKK-KEDIV 208

Query: 181  EQTFQVKTNISEKEN-----KKDGEQERQYNSAYXXXXXXXXXXXXXXXXXXXXAFNQRN 345
            EQ   +K  I+++EN     ++ G Q R     Y                      NQR 
Sbjct: 209  EQV--LKMRITKEENGQNYQRRGGGQVRGRGRGYGNGRGWRPYEDNT---------NQRG 257

Query: 346  SNQNSDLYCRICRKNNHDTKDCRFKCKRCRNANHSQRDCWHKDDGDTNE-ANLSEEK--E 516
             N +     R   K+ +D      KC  C    H   +C    +    E AN  EE+  E
Sbjct: 258  ENSSRGRG-RGSPKSRYDKSSV--KCYNCGKFGHYASECKAPSNKKVEEKANYVEEQVQE 314

Query: 517  PNQVFFSCLNSQQQIENI-WYVDSGCSNHMCGNKKMFVNLDESYSSEVRLGDGKSRKITG 693
             + +  +     +  EN  WY+DSG SNHMCG+K MFV LDES    V LGD    ++ G
Sbjct: 315  EDMLLMASYKKGEHEENHKWYLDSGASNHMCGSKSMFVELDESVRGNVALGDESKMEVKG 374

Query: 694  KGEIAVQTREGKMNIIKDVFYVPDLTQNLLSVGQLLEKDYKVEFNNDHCIIIDKQKNLTM 873
            KG+I ++ + G    I +V+Y+P +  N+LS+GQLLEK Y +   +++  I D++ NL +
Sbjct: 375  KGKILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLSIRDQESNL-I 433

Query: 874  AKIKMSSNKIFPLNLPLTEKIALQSTTEAEHNLWHLRYGHLSYKGLNLLKKKNMVFGLPN 1053
             K+ MS N++F LN+       L+   + E  LWHLR+GHL++ GL LL KK MV GLP 
Sbjct: 434  TKVSMSKNRMFVLNIRNDIAQCLKMCYKEESWLWHLRFGHLNFGGLKLLSKKEMVRGLPC 493

Query: 1054 IPDRDKTCEGCIFGKMHRLPFPK-ISYRAKAPLEIVHADICGPTQTPSLNDNRYFLLFVD 1230
            I   ++ CEGC+ GK  ++ FPK  S RA+ PLE++H D+CGP +  SL  + YFLLF+D
Sbjct: 494  INHPNQVCEGCLLGKQFKMSFPKESSTRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFID 553