BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00006212
         (778 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplas...   333   e-109
gb|PIN08775.1| hypothetical protein CDL12_18649 [Handroanthus im...   323   e-105
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,...   308   4e-99
ref|XP_022890334.1| RNA polymerase sigma factor sigE, chloroplas...   301   2e-96
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,...   296   2e-94
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,...   296   2e-94
ref|XP_019230135.1| PREDICTED: RNA polymerase sigma factor sigE,...   296   2e-94
ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,...   295   6e-94
ref|XP_010317478.1| PREDICTED: RNA polymerase sigma factor sigE,...   291   1e-93
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,...   291   9e-93
ref|XP_016564454.1| PREDICTED: RNA polymerase sigma factor sigE,...   290   4e-92
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,...   290   4e-92
gb|PHT53291.1| RNA polymerase sigma factor sigE, chloroplastic/m...   289   1e-91
gb|PIN27125.1| hypothetical protein CDL12_00097 [Handroanthus im...   279   2e-91
gb|KZV19114.1| RNA polymerase sigma factor sigE, chloroplastic/m...   286   1e-90
gb|PHU23214.1| RNA polymerase sigma factor sigE, chloroplastic/m...   284   7e-90
ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,...   282   4e-89
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,...   279   6e-88
ref|XP_022866476.1| RNA polymerase sigma factor sigE, chloroplas...   274   5e-86
gb|ONI25508.1| hypothetical protein PRUPE_2G307500 [Prunus persica]   268   5e-85

>ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Sesamum indicum]
          Length = 518

 Score =  333 bits (855), Expect = e-109
 Identities = 183/261 (70%), Positives = 208/261 (79%), Gaps = 2/261 (0%)
 Frame = -2

Query: 777 VSVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDE 598
           VS+ +R +ILSFK+DK+KN ALIAPRESVALP+E  KE  KR RKVKK  ERV+AVSTDE
Sbjct: 25  VSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAKKEKEKRSRKVKKLVERVSAVSTDE 84

Query: 597 APPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXX 418
           A PST++LDY+EAAAKLE IYKRSPATTVS E+V             R G          
Sbjct: 85  ASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVKDQRVKRRRPLRKRTGEAEEAEKKTA 144

Query: 417 ANFVRSQRKG-KRMGLEKRIALKMKKEGEFVASS-EKKKQSKNDEDEKIDRLVRDYSSST 244
            + VRS+RK  +R+ LEKRIALK  KE +F+ASS +K+KQ KNDEDEKIDRLVRDYS+ST
Sbjct: 145 DDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSSQKRKQRKNDEDEKIDRLVRDYSAST 204

Query: 243 DLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNM 64
           DLVSLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+VTDDELAEAT  
Sbjct: 205 DLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREVTDDELAEATKT 264

Query: 63  DVVHLRKQLEVGRAARNKLIK 1
           + V LRKQLEVGRAARNKLIK
Sbjct: 265 NAVQLRKQLEVGRAARNKLIK 285


>gb|PIN08775.1| hypothetical protein CDL12_18649 [Handroanthus impetiginosus]
          Length = 516

 Score =  323 bits (827), Expect = e-105
 Identities = 175/260 (67%), Positives = 201/260 (77%), Gaps = 1/260 (0%)
 Frame = -2

Query: 777 VSVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDE 598
           +S++KRPIILSFK+DKSK   L++P +SV LP+EVNKE GK LRKVKK +ERVNAVSTDE
Sbjct: 25  ISLVKRPIILSFKNDKSKKVTLVSPPDSVVLPLEVNKEKGKTLRKVKKHAERVNAVSTDE 84

Query: 597 APPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXX 418
           AP ST +LDY+EAAAKLE IYKRSPAT +  E+V             R G          
Sbjct: 85  APSSTFDLDYNEAAAKLEYIYKRSPATVIPVEEVKDQRVKRRQPRKRRTGEAEEGEKKTA 144

Query: 417 ANFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTD 241
              VRSQR + KR+ LEKRI+L+ KK GEF+ASS K+K   NDEDEK DRLVR+YS+STD
Sbjct: 145 DYVVRSQRSEEKRLSLEKRISLRAKK-GEFLASSPKRKLRNNDEDEKTDRLVREYSASTD 203

Query: 240 LVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMD 61
           LVSLDWKKMKIPPVLPS+EH+WLFKLMQ MK IL+VKE LQ DLGR++TD ELAEA NMD
Sbjct: 204 LVSLDWKKMKIPPVLPSSEHAWLFKLMQHMKAILQVKETLQHDLGRELTDYELAEAANMD 263

Query: 60  VVHLRKQLEVGRAARNKLIK 1
            V LRKQLEVGRAARNKLIK
Sbjct: 264 AVQLRKQLEVGRAARNKLIK 283


>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Erythranthe guttata]
 gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Erythranthe guttata]
          Length = 515

 Score =  308 bits (788), Expect = 4e-99
 Identities = 161/260 (61%), Positives = 196/260 (75%), Gaps = 1/260 (0%)
 Frame = -2

Query: 777 VSVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDE 598
           VS+L+RP++ +FK+DK K   LI+PRES ALP+E  K+N KRLRKVKKR+ERVNAVSTDE
Sbjct: 25  VSILRRPVVFAFKNDKIKKIVLISPRESAALPLEATKDNEKRLRKVKKRAERVNAVSTDE 84

Query: 597 APPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXX 418
           APPST++LDY+EAAAKLE I+K+SP   +S ++V                          
Sbjct: 85  APPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKDVRVKRRQPRKRTE--YADEAEKIA 142

Query: 417 ANFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTD 241
            N VRS+R K +R+ LEKRIAL+ KKE E  A  +++K  KNDEDEKIDRLVRDYS+S+D
Sbjct: 143 DNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRRKTGKNDEDEKIDRLVRDYSASSD 202

Query: 240 LVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMD 61
           LVSLDWKKMKIPPVLPS EH WLFKLMQP+K IL VKE ++ +LGR+ TD++LA A NMD
Sbjct: 203 LVSLDWKKMKIPPVLPSAEHVWLFKLMQPVKAILDVKETIENNLGREPTDEKLATAINMD 262

Query: 60  VVHLRKQLEVGRAARNKLIK 1
            V LRKQLE+GRAARNKLIK
Sbjct: 263 TVQLRKQLEIGRAARNKLIK 282


>ref|XP_022890334.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
 ref|XP_022890335.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 513

 Score =  301 bits (771), Expect = 2e-96
 Identities = 166/260 (63%), Positives = 193/260 (74%), Gaps = 1/260 (0%)
 Frame = -2

Query: 777 VSVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDE 598
           +S  KRP+I+SFK+D +KNTALIAPRESV LPVE  KEN KRLR VKKRSERV+A  TDE
Sbjct: 25  LSQQKRPVIISFKTDITKNTALIAPRESVCLPVETAKENEKRLRTVKKRSERVHAALTDE 84

Query: 597 APPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXX 418
           A  ST +LDY+EAAAKLE+I+KRSP    SD++V             R            
Sbjct: 85  AISSTFDLDYNEAAAKLEHIFKRSP----SDKEVKDQMVKRRRWRRKRGEAEEEGGKGSA 140

Query: 417 ANFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTD 241
              VR++RK  KR+ LE RIA++  KEGE +  S + KQ KNDEDE IDRLVR+YS+STD
Sbjct: 141 NTVVRNRRKKAKRLSLETRIAMRTNKEGEVIEPSMEGKQCKNDEDEDIDRLVREYSASTD 200

Query: 240 LVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMD 61
           LVSLDWKKMKIPPVL S+EH+WLFKLMQPMK IL+VKEN+Q DLGR+ TD ELAEATNMD
Sbjct: 201 LVSLDWKKMKIPPVLASSEHAWLFKLMQPMKAILQVKENIQNDLGREPTDCELAEATNMD 260

Query: 60  VVHLRKQLEVGRAARNKLIK 1
              LRK +EVGRAARNKLIK
Sbjct: 261 TFQLRKNVEVGRAARNKLIK 280


>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Nicotiana tomentosiformis]
 ref|XP_016512797.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Nicotiana tabacum]
          Length = 519

 Score =  296 bits (758), Expect = 2e-94
 Identities = 159/260 (61%), Positives = 195/260 (75%), Gaps = 4/260 (1%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTD-EAP 592
           LKRP+++SFK DK+K T L+AP+ES++LP+E +KEN KR R+V KR+ERV+AVS D EA 
Sbjct: 28  LKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEKRSRRVSKRTERVHAVSIDIEAS 87

Query: 591 PSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRN--GXXXXXXXXXX 418
           PSTLELDYSEAAAKLE+IYKRS  T  SD +              +              
Sbjct: 88  PSTLELDYSEAAAKLESIYKRSLETDSSDTEAKDHQIVKRRQRTRKRIIEGNEEAKKGIA 147

Query: 417 ANFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTD 241
            N V+++RK  KR+ L++RIAL   KEGE VASS+K++  ++ EDEKID+LVR+YS +TD
Sbjct: 148 DNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQKRELKEDTEDEKIDKLVREYSGATD 207

Query: 240 LVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMD 61
           L SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+ TD E+AEATN+D
Sbjct: 208 LASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREPTDAEVAEATNID 267

Query: 60  VVHLRKQLEVGRAARNKLIK 1
              LRK LEVGRAARNKLIK
Sbjct: 268 ASELRKNLEVGRAARNKLIK 287


>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Solanum tuberosum]
          Length = 516

 Score =  296 bits (757), Expect = 2e-94
 Identities = 163/258 (63%), Positives = 195/258 (75%), Gaps = 2/258 (0%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+SFK DK+KNT LIAP+ES++L +E +KEN KR R+V KRSERV+AV+  EA P
Sbjct: 28  LKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRRVSKRSERVHAVAI-EASP 86

Query: 588 STLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRN-GXXXXXXXXXXAN 412
           STLELDYSEAAAKLE+IYKRS  T  S+ +V             R              N
Sbjct: 87  STLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRIVEGDEEAKKEVADN 146

Query: 411 FVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDLV 235
            V+++RK  KR+ L++RIAL   KEGE VASSE++K  ++ EDEKID+LVR+YS +TDL 
Sbjct: 147 VVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDEKIDKLVREYSGATDLA 206

Query: 234 SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMDVV 55
           SLDWKKMKIPPVLPS+EH WLFKLMQPMK IL+VKENLQ DLGR+ TD E+AEATNMD  
Sbjct: 207 SLDWKKMKIPPVLPSSEHVWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATNMDAS 266

Query: 54  HLRKQLEVGRAARNKLIK 1
            LRK+LEVGRAARNKLIK
Sbjct: 267 ELRKKLEVGRAARNKLIK 284


>ref|XP_019230135.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Nicotiana attenuata]
 gb|OIT06417.1| rna polymerase sigma factor sige, chloroplasticmitochondrial
           [Nicotiana attenuata]
          Length = 518

 Score =  296 bits (757), Expect = 2e-94
 Identities = 159/259 (61%), Positives = 194/259 (74%), Gaps = 3/259 (1%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTD-EAP 592
           LKRP+++SFK DK+K T L+AP+ES++LP+E +KEN KR R+V KR+ERV+AVS D EA 
Sbjct: 28  LKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEKRSRRVSKRTERVHAVSIDIEAS 87

Query: 591 PSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRN-GXXXXXXXXXXA 415
           PSTLELDYSEAAAKLE+IYKRS  T  SD +              +              
Sbjct: 88  PSTLELDYSEAAAKLESIYKRSLETDSSDTEAKDHQIVKRRQRTRKRIVGDEEAKKGIAD 147

Query: 414 NFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDL 238
           N V+++RK  KR+ L++RIAL   KEGE VASS+ +K  ++ EDEKID+LVR+YS +TDL
Sbjct: 148 NVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQNRKLKEDTEDEKIDKLVREYSGATDL 207

Query: 237 VSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMDV 58
            SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+ TD E+AEATN+D 
Sbjct: 208 ASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREPTDAEVAEATNIDA 267

Query: 57  VHLRKQLEVGRAARNKLIK 1
             LRK LEVGRAARNKLIK
Sbjct: 268 SELRKNLEVGRAARNKLIK 286


>ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial isoform X1 [Solanum
           pennellii]
          Length = 516

 Score =  295 bits (754), Expect = 6e-94
 Identities = 160/262 (61%), Positives = 196/262 (74%), Gaps = 6/262 (2%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+SFK DK+KNT L++P+ES++LP+E +KEN KR R+V KR+ERV+AV T EAPP
Sbjct: 28  LKRPVIVSFKKDKTKNTTLVSPKESISLPIETSKENEKRSRRVTKRTERVHAV-TIEAPP 86

Query: 588 STLELDYSEAAAKLENIYKRS-----PATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXX 424
           STLELDYSEAAAKLE+IYKRS     P T V D  V                        
Sbjct: 87  STLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVESDE----EAKKE 142

Query: 423 XXANFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSS 247
              N V+++RK  KR+ L++RIAL   KEG+ +ASSE++K  ++ EDEKID+LVR+YS +
Sbjct: 143 VVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLKEDTEDEKIDKLVREYSGA 202

Query: 246 TDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATN 67
           TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+ TD E+AEATN
Sbjct: 203 TDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATN 262

Query: 66  MDVVHLRKQLEVGRAARNKLIK 1
           +D   LRK+LE GRAARNKLIK
Sbjct: 263 IDASELRKKLEAGRAARNKLIK 284


>ref|XP_010317478.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial isoform X3 [Solanum
           lycopersicum]
          Length = 437

 Score =  291 bits (746), Expect = 1e-93
 Identities = 159/262 (60%), Positives = 195/262 (74%), Gaps = 6/262 (2%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+SFK D +KNT L++P+ES++ P+E +KEN KR R+V KR+ERV+AV T EAPP
Sbjct: 28  LKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTERVHAV-TIEAPP 86

Query: 588 STLELDYSEAAAKLENIYKRS-----PATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXX 424
           STLELDYSEAAAKLE+IYKRS     P T V D  V                        
Sbjct: 87  STLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVESDE----EAKKE 142

Query: 423 XXANFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSS 247
              N V+++RK  KR+ L++RIAL   KEG+ +ASSE++K +++ EDEKID+LVR+YS +
Sbjct: 143 VVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKIDKLVREYSGA 202

Query: 246 TDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATN 67
           TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+ TD E+AEATN
Sbjct: 203 TDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATN 262

Query: 66  MDVVHLRKQLEVGRAARNKLIK 1
           MD   LRK+LE GRAARNKLIK
Sbjct: 263 MDASELRKKLEAGRAARNKLIK 284


>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial isoform X1 [Solanum
           lycopersicum]
          Length = 516

 Score =  291 bits (746), Expect = 9e-93
 Identities = 159/262 (60%), Positives = 195/262 (74%), Gaps = 6/262 (2%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+SFK D +KNT L++P+ES++ P+E +KEN KR R+V KR+ERV+AV T EAPP
Sbjct: 28  LKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTERVHAV-TIEAPP 86

Query: 588 STLELDYSEAAAKLENIYKRS-----PATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXX 424
           STLELDYSEAAAKLE+IYKRS     P T V D  V                        
Sbjct: 87  STLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVESDE----EAKKE 142

Query: 423 XXANFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSS 247
              N V+++RK  KR+ L++RIAL   KEG+ +ASSE++K +++ EDEKID+LVR+YS +
Sbjct: 143 VVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDEKIDKLVREYSGA 202

Query: 246 TDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATN 67
           TDL SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+ TD E+AEATN
Sbjct: 203 TDLASLDWKKMKIPPVLPSSEHTWLFKLMQPMKAILQVKENLQNDLGREPTDGEVAEATN 262

Query: 66  MDVVHLRKQLEVGRAARNKLIK 1
           MD   LRK+LE GRAARNKLIK
Sbjct: 263 MDASELRKKLEAGRAARNKLIK 284


>ref|XP_016564454.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Capsicum annuum]
 gb|PHT87446.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Capsicum annuum]
          Length = 516

 Score =  290 bits (742), Expect = 4e-92
 Identities = 158/258 (61%), Positives = 193/258 (74%), Gaps = 2/258 (0%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+SFK DK+KNT L+AP+ES++LP+E +KEN KR R+V KR ERV+AVS  EA P
Sbjct: 28  LKRPVIVSFKKDKTKNTTLVAPKESISLPIETSKENEKRSRRVSKRPERVHAVSM-EAFP 86

Query: 588 STLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXXANF 409
           ST ELDYSEAAAKLE+IYKRS  T  S+ +V             R            AN 
Sbjct: 87  STSELDYSEAAAKLESIYKRSLETASSNTEVKDRLVKRRPRTRKRIVEGDEEAKREVANN 146

Query: 408 VRSQR--KGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDLV 235
           V   R  K KR+ L++RIAL   K+GE V SSE++K  ++ EDEKID+LVR+YS +TDL 
Sbjct: 147 VVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSERRKLKEDTEDEKIDKLVREYSGATDLA 206

Query: 234 SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMDVV 55
           SLDWKKMKIPPVLPS+EH+WLFKLMQPMK +L+VKENLQ+DLGR+ TD E+A+AT+MD  
Sbjct: 207 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKAVLQVKENLQSDLGREPTDGEVADATSMDAS 266

Query: 54  HLRKQLEVGRAARNKLIK 1
            LRK+LEVGRAARNKLIK
Sbjct: 267 ELRKKLEVGRAARNKLIK 284


>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Nicotiana sylvestris]
 ref|XP_016473301.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial-like [Nicotiana tabacum]
          Length = 519

 Score =  290 bits (742), Expect = 4e-92
 Identities = 157/260 (60%), Positives = 192/260 (73%), Gaps = 4/260 (1%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTD-EAP 592
           LKRP+++SFK DK+K T L+AP+ES++LP+E +KEN KR R+V KR+ERV+AVS D EA 
Sbjct: 28  LKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEKRSRRVSKRTERVHAVSIDIEAS 87

Query: 591 PSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRN--GXXXXXXXXXX 418
            S LELDYSEAAAKLE+IYKRS  T  SD +              +              
Sbjct: 88  TSPLELDYSEAAAKLESIYKRSLETDSSDTEAKDHQIVKRRQRTRKRIVEGDEETKKGIA 147

Query: 417 ANFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTD 241
            N V+++RK  KR+ L++RIAL   KEGE VASS+K++  ++ EDEKID+LVR+YS +TD
Sbjct: 148 DNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQKRELKEDTEDEKIDKLVREYSGATD 207

Query: 240 LVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMD 61
           L SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ DLGR+ TD E AEATN+D
Sbjct: 208 LASLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQNDLGREPTDAEAAEATNID 267

Query: 60  VVHLRKQLEVGRAARNKLIK 1
              LRK LEVGRAARNKLIK
Sbjct: 268 ASELRKNLEVGRAARNKLIK 287


>gb|PHT53291.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Capsicum baccatum]
          Length = 516

 Score =  289 bits (739), Expect = 1e-91
 Identities = 157/258 (60%), Positives = 193/258 (74%), Gaps = 2/258 (0%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+SFK DK+KNT L+AP+ES++LP+E +KEN KR R+V KR +RV+AVS  EA P
Sbjct: 28  LKRPVIVSFKKDKTKNTTLVAPKESISLPIETSKENEKRSRRVSKRPDRVHAVSM-EASP 86

Query: 588 STLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXXANF 409
           ST ELDYSEAAAKLE+IYKRS  T  S+ +V             R            AN 
Sbjct: 87  STSELDYSEAAAKLESIYKRSLETASSNTEVKDRLVKRRPRTRKRIVEGDEEAKREVANN 146

Query: 408 VRSQR--KGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDLV 235
           V   R  K KR+ L++RIAL   K+GE V SSE++K  ++ EDEKID+LVR+YS +TDL 
Sbjct: 147 VVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSERRKLKEDTEDEKIDKLVREYSGATDLA 206

Query: 234 SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMDVV 55
           SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ+DLGR+ TD ++A+AT+MD  
Sbjct: 207 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQSDLGREPTDGKVADATSMDAS 266

Query: 54  HLRKQLEVGRAARNKLIK 1
            LRK+LEVGRAARNKLIK
Sbjct: 267 ELRKKLEVGRAARNKLIK 284


>gb|PIN27125.1| hypothetical protein CDL12_00097 [Handroanthus impetiginosus]
          Length = 237

 Score =  279 bits (713), Expect = 2e-91
 Identities = 145/212 (68%), Positives = 165/212 (77%)
 Frame = -2

Query: 774 SVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEA 595
           S+ K P+ILSFK+D+SKNTAL+  RESV LP+E  KENGKRLRKV+KR ER+NAV TDEA
Sbjct: 26  SLFKMPVILSFKNDESKNTALVVSRESVNLPLESKKENGKRLRKVRKRVERINAVKTDEA 85

Query: 594 PPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXXA 415
            PSTLELDYSEAAAKLENIYK   AT   DE+V             R G           
Sbjct: 86  SPSTLELDYSEAAAKLENIYKGRSATVEFDEEVKTQRRKRRESRRKRTGETEEIEEKSSE 145

Query: 414 NFVRSQRKGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDLV 235
           N VRS+RKGKR+ LEKRIAL+MKKEGE VASS+KKK ++ND+DEKIDRLVRDYS+S+D V
Sbjct: 146 NVVRSKRKGKRLNLEKRIALRMKKEGELVASSQKKKHNENDDDEKIDRLVRDYSASSDFV 205

Query: 234 SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEIL 139
           SLDWKKMKIPPVLPS+EH WLFKLMQPMKEI+
Sbjct: 206 SLDWKKMKIPPVLPSSEHVWLFKLMQPMKEIV 237


>gb|KZV19114.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Dorcoceras hygrometricum]
          Length = 515

 Score =  286 bits (732), Expect = 1e-90
 Identities = 157/260 (60%), Positives = 194/260 (74%), Gaps = 2/260 (0%)
 Frame = -2

Query: 774 SVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEA 595
           +VL+RP I+SFK+++SKNTAL+AP ++V LPVE ++ N K LRK ++RSER++AVS DEA
Sbjct: 26  AVLRRPAIVSFKTERSKNTALVAPPKAVTLPVETDQGNEKTLRKGRRRSERMHAVSLDEA 85

Query: 594 PPSTLE-LDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXX 418
             STL+ LDY+EAAAKLENI+KRS   T+SD +V             R            
Sbjct: 86  SSSTLDQLDYNEAAAKLENIFKRSHGATLSDSEVKDLVSKRRRSMRTREATKEAEQMKIA 145

Query: 417 ANFVRS-QRKGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTD 241
            +FVRS +RK KR+ LEKRIAL+ KKE E + SSE++K+  N   EKIDRLVRDYSSSTD
Sbjct: 146 DSFVRSLRRKDKRLSLEKRIALRSKKESESLGSSERRKRGNNYVHEKIDRLVRDYSSSTD 205

Query: 240 LVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMD 61
           LVSLDWKK++IPPVL S+EHSWLF LMQPMK I ++K+ LQ DL RDV D+ELAEA NMD
Sbjct: 206 LVSLDWKKVQIPPVLSSSEHSWLFNLMQPMKAIQQLKKTLQNDLQRDVRDEELAEACNMD 265

Query: 60  VVHLRKQLEVGRAARNKLIK 1
            V LRK+L+VG AARNKLIK
Sbjct: 266 SVQLRKKLKVGHAARNKLIK 285


>gb|PHU23214.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Capsicum chinense]
          Length = 516

 Score =  284 bits (727), Expect = 7e-90
 Identities = 156/258 (60%), Positives = 190/258 (73%), Gaps = 2/258 (0%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           LKRP+I+ FK DK+KNT L+AP+ES++LP+E +KEN KR R+V KR ERV+AVS  E  P
Sbjct: 28  LKRPVIVLFKKDKTKNTTLVAPKESISLPIETSKENEKRSRRVSKRPERVHAVSM-ETFP 86

Query: 588 STLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXXANF 409
           ST ELDYSEAAAKLE+IYKRS  T  S+ +V             R            AN 
Sbjct: 87  STSELDYSEAAAKLESIYKRSLETASSNTEVKDRLVKRRPRTRKRIVEGDEEAKREVANN 146

Query: 408 VRSQR--KGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDLV 235
           V   R  K KR+ L++RIAL   K+GE V SS ++K  ++ EDEKID+LVR+YS +TDL 
Sbjct: 147 VVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSARRKLEEDTEDEKIDKLVREYSGATDLA 206

Query: 234 SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMDVV 55
           SLDWKKMKIPPVLPS+EH+WLFKLMQPMK IL+VKENLQ+DLGR+ TD E+A+AT+MD  
Sbjct: 207 SLDWKKMKIPPVLPSSEHAWLFKLMQPMKAILQVKENLQSDLGREPTDGEVADATSMDAS 266

Query: 54  HLRKQLEVGRAARNKLIK 1
            LRK+LEVGRAARNKLIK
Sbjct: 267 ELRKKLEVGRAARNKLIK 284


>ref|XP_012852163.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Erythranthe guttata]
 gb|EYU25198.1| hypothetical protein MIMGU_mgv1a004656mg [Erythranthe guttata]
          Length = 516

 Score =  282 bits (722), Expect = 4e-89
 Identities = 164/264 (62%), Positives = 192/264 (72%), Gaps = 5/264 (1%)
 Frame = -2

Query: 777 VSVLKRPIILSFKSDKSKNT-ALIAPRESVALPVEVNKENGKRLRKVKKR--SERVNAVS 607
           VS+ K+P++LS K+DK+K + ALIAP ESVALP E   E  K LRKVKK    +RV+AVS
Sbjct: 27  VSLSKKPLVLSLKTDKAKKSRALIAPLESVALPSEAKNETVKSLRKVKKTRPDKRVSAVS 86

Query: 606 -TDEAPP-STLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXX 433
            TDEA P STL+LDY+EAAAKLE +YK SPA T  DE++             R       
Sbjct: 87  ITDEASPGSTLDLDYTEAAAKLEYLYKTSPALT--DEEIKTKSVQTRQPRRKR-----ID 139

Query: 432 XXXXXANFVRSQRKGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYS 253
                 N VRSQR+GKR+ LEKR+AL+MKKE   + S +K+  +K+D+DEKIDRL+RDYS
Sbjct: 140 ESVETKNLVRSQRRGKRLSLEKRVALRMKKESVPLLSQKKEVNNKSDDDEKIDRLLRDYS 199

Query: 252 SSTDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEA 73
            S+D  SLDWKK KIPPVLPS+EH WLFKLMQPMKEILKVKE L  DLGR+V DDELAEA
Sbjct: 200 ISSDFFSLDWKKTKIPPVLPSSEHVWLFKLMQPMKEILKVKETLTNDLGREVRDDELAEA 259

Query: 72  TNMDVVHLRKQLEVGRAARNKLIK 1
           TN DV  LRKQLEVGR ARNKLIK
Sbjct: 260 TNTDVFQLRKQLEVGRTARNKLIK 283


>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
           chloroplastic/mitochondrial [Vitis vinifera]
 emb|CBI22546.3| unnamed protein product, partial [Vitis vinifera]
          Length = 518

 Score =  279 bits (714), Expect = 6e-88
 Identities = 150/258 (58%), Positives = 188/258 (72%), Gaps = 2/258 (0%)
 Frame = -2

Query: 768 LKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEAPP 589
           L+RP++L+FK+DK+KN AL+ P E + LP+E +K++ KRLR+  K S+RV AVSTDE  P
Sbjct: 30  LRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSKRVKAVSTDEVSP 89

Query: 588 STLELDYSEAAAKLENIYKRSPATTVSD-EDVXXXXXXXXXXXXXRNGXXXXXXXXXXAN 412
            ++ELDY+EAAAKLENIYK SPAT VS+ ED+                           N
Sbjct: 90  CSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTLADDKAEKEVSDN 149

Query: 411 FVR-SQRKGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSSTDLV 235
            VR   +K KR+ LEKRIAL   K+ + VAS +KK+ SKN EDE ID LVR+YS+STDLV
Sbjct: 150 VVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKN-EDENIDVLVREYSASTDLV 208

Query: 234 SLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNMDVV 55
           SLDWKKMKIPPVLP +EH+WLFKLMQPMK +L+VK+NLQ DLGR+ TD ELAEA +M  V
Sbjct: 209 SLDWKKMKIPPVLPPSEHAWLFKLMQPMKGLLEVKDNLQKDLGREPTDGELAEAMSMSAV 268

Query: 54  HLRKQLEVGRAARNKLIK 1
            +R+ +EVG+AARNKLIK
Sbjct: 269 QVRRHMEVGQAARNKLIK 286


>ref|XP_022866476.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
           [Olea europaea var. sylvestris]
          Length = 515

 Score =  274 bits (701), Expect = 5e-86
 Identities = 158/261 (60%), Positives = 186/261 (71%), Gaps = 3/261 (1%)
 Frame = -2

Query: 774 SVLKRPIILSFKSD-KSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDE 598
           S ++RP+ILS K D K+K    +APRES +L VE  +EN KR+R V+    R  AVST E
Sbjct: 26  SAVRRPVILSLKKDNKTKKPGFVAPRESKSLAVEPAEENEKRIRTVR----RARAVSTGE 81

Query: 597 APPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXXXXXXXXXX 418
           A PS+ ELDY+ AAA LENIYKRS    VSD +V             R G          
Sbjct: 82  ASPSSSELDYNVAAATLENIYKRSSTEDVSDVEVKDHVVKRRRQRRKRVGEAEEEVEKGT 141

Query: 417 AN-FVRSQRKG-KRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSST 244
            +  VRS+RK  KR+ LEKRIA +MKKEGE +ASS + K S N EDEK+DRLVR+YS S+
Sbjct: 142 NDTIVRSRRKKEKRLSLEKRIAPRMKKEGEVIASSREGKCSMNYEDEKVDRLVREYSVSS 201

Query: 243 DLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATNM 64
           DLVSLDWKKMK+P VLPS+EH+WLFKLMQPMK IL+VK+NL+ DLGR  TDDELAEATN 
Sbjct: 202 DLVSLDWKKMKVPSVLPSSEHAWLFKLMQPMKAILQVKDNLENDLGRKPTDDELAEATNT 261

Query: 63  DVVHLRKQLEVGRAARNKLIK 1
           DVV LRKQ+EVGRAARNKLIK
Sbjct: 262 DVVQLRKQMEVGRAARNKLIK 282


>gb|ONI25508.1| hypothetical protein PRUPE_2G307500 [Prunus persica]
          Length = 390

 Score =  268 bits (684), Expect = 5e-85
 Identities = 140/262 (53%), Positives = 189/262 (72%), Gaps = 4/262 (1%)
 Frame = -2

Query: 774 SVLKRPIILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSERVNAVSTDEA 595
           S L++P+I++FK+D++  TAL+AP+E + LP+E  K++ KRL K +K ++ V + +TD A
Sbjct: 26  STLRKPLIVAFKTDEANKTALVAPQEKIPLPIETRKKHQKRLGKARKLAKSVKSATTDVA 85

Query: 594 PPSTLELDYSEAAAKLENIYKRSPATTVSD--EDVXXXXXXXXXXXXXRNGXXXXXXXXX 421
            P TLE+DY+EAAAKLEN+YKRSP T  +   EDV              +          
Sbjct: 86  SPCTLEVDYNEAAAKLENLYKRSPETEANSDVEDVDGLMRRGRKRRKKTSESDADKDENR 145

Query: 420 XANFVRSQR--KGKRMGLEKRIALKMKKEGEFVASSEKKKQSKNDEDEKIDRLVRDYSSS 247
            +N V   R  K KR+ L KR+ALK  K+ + ++S  +K++S+ +E+EKI+ LVR+YS+S
Sbjct: 146 TSNTVVRNRTKKAKRLSLNKRVALKWNKDEKVISSIVRKRKSRKNENEKIEELVREYSTS 205

Query: 246 TDLVSLDWKKMKIPPVLPSTEHSWLFKLMQPMKEILKVKENLQTDLGRDVTDDELAEATN 67
           TDLVSLDWKKMKIPPVL S+EH+WLFKLMQPMK +L+VKENLQ DLGR+ T+ ELAEATN
Sbjct: 206 TDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGLLEVKENLQKDLGREPTNGELAEATN 265

Query: 66  MDVVHLRKQLEVGRAARNKLIK 1
           M VV ++K LEVGRAAR+KLIK
Sbjct: 266 MSVVQVKKHLEVGRAARSKLIK 287