BLASTX nr result
ID: Rehmannia30_contig00006211
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00006211
(525 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN27125.1| hypothetical protein CDL12_00097 [Handroanthus im... 200 6e-62
ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplas... 180 6e-51
gb|PIN08775.1| hypothetical protein CDL12_18649 [Handroanthus im... 176 2e-49
ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,... 173 2e-48
ref|XP_022890334.1| RNA polymerase sigma factor sigE, chloroplas... 158 8e-43
ref|XP_019230135.1| PREDICTED: RNA polymerase sigma factor sigE,... 154 2e-41
ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,... 153 6e-41
emb|CDP05091.1| unnamed protein product [Coffea canephora] 153 1e-40
ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,... 152 1e-40
ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,... 152 2e-40
ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,... 150 7e-40
ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,... 149 2e-39
gb|KZV19114.1| RNA polymerase sigma factor sigE, chloroplastic/m... 149 2e-39
ref|XP_010317478.1| PREDICTED: RNA polymerase sigma factor sigE,... 147 3e-39
gb|PHT53291.1| RNA polymerase sigma factor sigE, chloroplastic/m... 148 7e-39
ref|XP_016564454.1| PREDICTED: RNA polymerase sigma factor sigE,... 148 7e-39
ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,... 147 9e-39
gb|PHU23214.1| RNA polymerase sigma factor sigE, chloroplastic/m... 143 5e-37
ref|XP_015070569.1| PREDICTED: RNA polymerase sigma factor sigE,... 137 3e-35
gb|PNT09190.1| hypothetical protein POPTR_012G031100v3 [Populus ... 132 5e-35
>gb|PIN27125.1| hypothetical protein CDL12_00097 [Handroanthus impetiginosus]
Length = 237
Score = 200 bits (509), Expect = 6e-62
Identities = 111/174 (63%), Positives = 125/174 (71%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GLN TR S+ K PVILSFK+D+SKNTAL+ RESV LP+E KENGKRLRKV+KR E
Sbjct: 16 GLNKMYLTRASLFKMPVILSFKNDESKNTALVVSRESVNLPLESKKENGKRLRKVRKRVE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
R+NAV TDEA PSTLELDYSEAAAKLENIYK AT DE+V R G
Sbjct: 76 RINAVKTDEASPSTLELDYSEAAAKLENIYKGRSATVEFDEEVKTQRRKRRESRRKRTGE 135
Query: 163 XXXXXXXXXENFVRSQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
EN VRS+RKGKR+ LEKRIAL+MKKEGE VASSQKKK ++ND+DE
Sbjct: 136 TEEIEEKSSENVVRSKRKGKRLNLEKRIALRMKKEGELVASSQKKKHNENDDDE 189
>ref|XP_011084487.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Sesamum indicum]
Length = 518
Score = 180 bits (456), Expect = 6e-51
Identities = 107/176 (60%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+ R TRVS+ +R VILSFK+DK+KN ALIAPRESVALP+E KE KR RKVKK E
Sbjct: 16 GLDARYLTRVSLCRRQVILSFKNDKNKNIALIAPRESVALPLEAKKEKEKRSRKVKKLVE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
RV+AVSTDEA PST++LDY+EAAAKLE IYKRSPATTVS E+V R G
Sbjct: 76 RVSAVSTDEASPSTIDLDYNEAAAKLEYIYKRSPATTVSLEEVKDQRVKRRRPLRKRTGE 135
Query: 163 XXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVA-SSQKKKDSKNDEDE 2
++ VRS+R K +R+ LEKRIALK KE +F+A SSQK+K KNDEDE
Sbjct: 136 AEEAEKKTADDVVRSKRKKERRLTLEKRIALKTNKEVDFLASSSQKRKQRKNDEDE 191
>gb|PIN08775.1| hypothetical protein CDL12_18649 [Handroanthus impetiginosus]
Length = 516
Score = 176 bits (445), Expect = 2e-49
Identities = 100/174 (57%), Positives = 122/174 (70%), Gaps = 1/174 (0%)
Frame = -3
Query: 520 LNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSER 341
L+ R TR+S++KRP+ILSFK+DKSK L++P +SV LP+EVNKE GK LRKVKK +ER
Sbjct: 17 LSERYLTRISLVKRPIILSFKNDKSKKVTLVSPPDSVVLPLEVNKEKGKTLRKVKKHAER 76
Query: 340 VNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGXX 161
VNAVSTDEAP ST +LDY+EAAAKLE IYKRSPAT + E+V R G
Sbjct: 77 VNAVSTDEAPSSTFDLDYNEAAAKLEYIYKRSPATVIPVEEVKDQRVKRRQPRKRRTGEA 136
Query: 160 XXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+ VRSQR + KR+ LEKRI+L+ KK GEF+ASS K+K NDEDE
Sbjct: 137 EEGEKKTADYVVRSQRSEEKRLSLEKRISLRAKK-GEFLASSPKRKLRNNDEDE 189
>ref|XP_012858574.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Erythranthe guttata]
gb|EYU19623.1| hypothetical protein MIMGU_mgv1a020453mg [Erythranthe guttata]
Length = 515
Score = 173 bits (438), Expect = 2e-48
Identities = 96/175 (54%), Positives = 120/175 (68%), Gaps = 1/175 (0%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GLN R TRVS+L+RPV+ +FK+DK K LI+PRES ALP+E K+N KRLRKVKKR+E
Sbjct: 16 GLNERYLTRVSILRRPVVFAFKNDKIKKIVLISPRESAALPLEATKDNEKRLRKVKKRAE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
RVNAVSTDEAPPST++LDY+EAAAKLE I+K+SP +S ++V
Sbjct: 76 RVNAVSTDEAPPSTIDLDYNEAAAKLEYIFKQSPTVEISVDEVKDVRVKRRQPRKRTE-- 133
Query: 163 XXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+N VRS+R K +R+ LEKRIAL+ KKE E A Q++K KNDEDE
Sbjct: 134 YADEAEKIADNVVRSRRSKDRRLNLEKRIALRTKKEDESTAIFQRRKTGKNDEDE 188
>ref|XP_022890334.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Olea europaea var. sylvestris]
ref|XP_022890335.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Olea europaea var. sylvestris]
Length = 513
Score = 158 bits (400), Expect = 8e-43
Identities = 94/175 (53%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+T+ S +S KRPVI+SFK+D +KNTALIAPRESV LPVE KEN KRLR VKKRSE
Sbjct: 16 GLSTKFSAHLSQQKRPVIISFKTDITKNTALIAPRESVCLPVETAKENEKRLRTVKKRSE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
RV+A TDEA ST +LDY+EAAAKLE+I+KRSP SD++V R
Sbjct: 76 RVHAALTDEAISSTFDLDYNEAAAKLEHIFKRSP----SDKEVKDQMVKRRRWRRKRGEA 131
Query: 163 XXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
VR++R K KR+ LE RIA++ KEGE + S + K KNDEDE
Sbjct: 132 EEEGGKGSANTVVRNRRKKAKRLSLETRIAMRTNKEGEVIEPSMEGKQCKNDEDE 186
>ref|XP_019230135.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana attenuata]
gb|OIT06417.1| rna polymerase sigma factor sige, chloroplasticmitochondrial
[Nicotiana attenuata]
Length = 518
Score = 154 bits (390), Expect = 2e-41
Identities = 91/177 (51%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+TR S + LKRPV++SFK DK+K T L+AP+ES++LP+E +KEN KR R+V KR+E
Sbjct: 16 GLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEKRSRRVSKRTE 75
Query: 343 RVNAVSTD-EAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRN- 170
RV+AVS D EA PSTLELDYSEAAAKLE+IYKRS T SD + +
Sbjct: 76 RVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAKDHQIVKRRQRTRKRI 135
Query: 169 GXXXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+N V+++R K KR+ L++RIAL KEGE VASSQ +K ++ EDE
Sbjct: 136 VGDEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQNRKLKEDTEDE 192
>ref|XP_006350582.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Solanum tuberosum]
Length = 516
Score = 153 bits (387), Expect = 6e-41
Identities = 92/176 (52%), Positives = 120/176 (68%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL++R STR+ LKRPVI+SFK DK+KNT LIAP+ES++L +E +KEN KR R+V KRSE
Sbjct: 16 GLSSRFSTRLCPLKRPVIVSFKKDKTKNTTLIAPKESISLSIETSKENEKRSRRVSKRSE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDV-XXXXXXXXXXXXXRNG 167
RV+AV+ EA PSTLELDYSEAAAKLE+IYKRS T S+ +V
Sbjct: 76 RVHAVAI-EASPSTLELDYSEAAAKLESIYKRSLETASSNTEVQDHLVKRRPRTRKRIVE 134
Query: 166 XXXXXXXXXXENFVRSQRK-GKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+N V+++RK KR+ L++RIAL KEGE VASS+++K ++ EDE
Sbjct: 135 GDEEAKKEVADNVVKNRRKTSKRLNLDQRIALLKNKEGEMVASSERRKLKEDTEDE 190
>emb|CDP05091.1| unnamed protein product [Coffea canephora]
Length = 530
Score = 153 bits (386), Expect = 1e-40
Identities = 88/176 (50%), Positives = 114/176 (64%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GLN + +TR+S +RP ++ FK+ K+KN AL+APRES++LPVE + N KRL++V KR E
Sbjct: 16 GLNAKLATRISQPRRPSLVPFKNGKTKNAALVAPRESLSLPVEGSNVNEKRLKRVVKRPE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDV-XXXXXXXXXXXXXRNG 167
RV AVS EA STLELDY+EAAAKLENIYK SPAT VSD +V
Sbjct: 76 RVKAVSALEAASSTLELDYNEAAAKLENIYKLSPATKVSDMEVNDLGMKRDQQRRKRMKE 135
Query: 166 XXXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
VRS R K KR+ L+KR+ L+ K++ E ++SSQK+K S+ DEDE
Sbjct: 136 ANVEAEKGTNYTVVRSPRKKSKRLSLDKRVTLRKKRDSEAISSSQKRKSSEGDEDE 191
>ref|XP_009601650.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana tomentosiformis]
ref|XP_016512797.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Nicotiana tabacum]
Length = 519
Score = 152 bits (385), Expect = 1e-40
Identities = 89/178 (50%), Positives = 114/178 (64%), Gaps = 4/178 (2%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+T S + LKRPV++SFK DK+K T L+AP+ES++LP+E +KEN KR R+V KR+E
Sbjct: 16 GLSTSFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEKRSRRVSKRTE 75
Query: 343 RVNAVSTD-EAPPSTLELDYSEAAAKLENIYKRSPATTVSD---EDVXXXXXXXXXXXXX 176
RV+AVS D EA PSTLELDYSEAAAKLE+IYKRS T SD +D
Sbjct: 76 RVHAVSIDIEASPSTLELDYSEAAAKLESIYKRSLETDSSDTEAKDHQIVKRRQRTRKRI 135
Query: 175 RNGXXXXXXXXXXENFVRSQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
G ++K KR+ L++RIAL KEGE VASSQK++ ++ EDE
Sbjct: 136 IEGNEEAKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQKRELKEDTEDE 193
>ref|XP_015070568.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
pennellii]
Length = 516
Score = 152 bits (384), Expect = 2e-40
Identities = 91/180 (50%), Positives = 121/180 (67%), Gaps = 6/180 (3%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL++R S R+ LKRPVI+SFK DK+KNT L++P+ES++LP+E +KEN KR R+V KR+E
Sbjct: 16 GLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETSKENEKRSRRVTKRTE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSDEDVXXXXXXXXXXXX 179
RV+AV T EAPPSTLELDYSEAAAKLE+IYKR SP T V D V
Sbjct: 76 RVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVE 134
Query: 178 XRNGXXXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+N V+++R K KR+ L++RIAL KEG+ +ASS+++K ++ EDE
Sbjct: 135 SDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLKEDTEDE 190
>ref|XP_002268709.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Vitis vinifera]
emb|CBI22546.3| unnamed protein product, partial [Vitis vinifera]
Length = 518
Score = 150 bits (380), Expect = 7e-40
Identities = 84/175 (48%), Positives = 114/175 (65%), Gaps = 2/175 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GLN + S + L+RP++L+FK+DK+KN AL+ P E + LP+E +K++ KRLR+ K S+
Sbjct: 18 GLNAKFSNHQTPLRRPLVLAFKADKAKNIALVTPHEPIPLPIETSKDHKKRLRRASKPSK 77
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVXXXXXXXXXXXXXRNG 167
RV AVSTDE P ++ELDY+EAAAKLENIYK SPAT VS+ ED+
Sbjct: 78 RVKAVSTDEVSPCSVELDYNEAAAKLENIYKLSPATDVSEAEDLERVVRRGRQRRKRVTL 137
Query: 166 XXXXXXXXXXENFVR-SQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDED 5
+N VR +K KR+ LEKRIAL K+ + VAS QKK+DSKN+++
Sbjct: 138 ADDKAEKEVSDNVVRIHNKKPKRLSLEKRIALSKMKQEKAVASIQKKRDSKNEDE 192
>ref|XP_009785134.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Nicotiana sylvestris]
ref|XP_016473301.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial-like [Nicotiana tabacum]
Length = 519
Score = 149 bits (377), Expect = 2e-39
Identities = 88/178 (49%), Positives = 113/178 (63%), Gaps = 4/178 (2%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+TR S + LKRPV++SFK DK+K T L+AP+ES++LP+E +KEN KR R+V KR+E
Sbjct: 16 GLSTRFSAHLCPLKRPVVVSFKKDKTKKTTLVAPKESISLPIETSKENEKRSRRVSKRTE 75
Query: 343 RVNAVSTD-EAPPSTLELDYSEAAAKLENIYKRSPATTVSD---EDVXXXXXXXXXXXXX 176
RV+AVS D EA S LELDYSEAAAKLE+IYKRS T SD +D
Sbjct: 76 RVHAVSIDIEASTSPLELDYSEAAAKLESIYKRSLETDSSDTEAKDHQIVKRRQRTRKRI 135
Query: 175 RNGXXXXXXXXXXENFVRSQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
G ++K KR+ L++RIAL KEGE VASSQK++ ++ EDE
Sbjct: 136 VEGDEETKKGIADNVVKNRRKKSKRLNLDQRIALLKNKEGELVASSQKRELKEDTEDE 193
>gb|KZV19114.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
[Dorcoceras hygrometricum]
Length = 515
Score = 149 bits (376), Expect = 2e-39
Identities = 86/172 (50%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GLN+R + +VL+RP I+SFK+++SKNTAL+AP ++V LPVE ++ N K LRK ++RSE
Sbjct: 16 GLNSRILSGKAVLRRPAIVSFKTERSKNTALVAPPKAVTLPVETDQGNEKTLRKGRRRSE 75
Query: 343 RVNAVSTDEAPPSTL-ELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNG 167
R++AVS DEA STL +LDY+EAAAKLENI+KRS T+SD +V R
Sbjct: 76 RMHAVSLDEASSSTLDQLDYNEAAAKLENIFKRSHGATLSDSEVKDLVSKRRRSMRTREA 135
Query: 166 XXXXXXXXXXENFVRS-QRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKN 14
++FVRS +RK KR+ LEKRIAL+ KKE E + SS+++K N
Sbjct: 136 TKEAEQMKIADSFVRSLRRKDKRLSLEKRIALRSKKESESLGSSERRKRGNN 187
>ref|XP_010317478.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X3 [Solanum
lycopersicum]
Length = 437
Score = 147 bits (372), Expect = 3e-39
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 6/180 (3%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +KEN KR R+V KR+E
Sbjct: 16 GLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSDEDVXXXXXXXXXXXX 179
RV+AV T EAPPSTLELDYSEAAAKLE+IYKR SP T V D V
Sbjct: 76 RVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVE 134
Query: 178 XRNGXXXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+N V+++R K KR+ L++RIAL KEG+ +ASS+++K +++ EDE
Sbjct: 135 SDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDE 190
>gb|PHT53291.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Capsicum baccatum]
Length = 516
Score = 148 bits (373), Expect = 7e-39
Identities = 87/176 (49%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+TR + R+ LKRPVI+SFK DK+KNT L+AP+ES++LP+E +KEN KR R+V KR +
Sbjct: 16 GLSTRFAARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETSKENEKRSRRVSKRPD 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
RV+AVS EA PST ELDYSEAAAKLE+IYKRS T S+ +V R
Sbjct: 76 RVHAVSM-EASPSTSELDYSEAAAKLESIYKRSLETASSNTEVKDRLVKRRPRTRKRIVE 134
Query: 163 XXXXXXXXXENFV--RSQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
N V ++K KR+ L++RIAL K+GE V SS+++K ++ EDE
Sbjct: 135 GDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSERRKLKEDTEDE 190
>ref|XP_016564454.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial [Capsicum annuum]
gb|PHT87446.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Capsicum annuum]
Length = 516
Score = 148 bits (373), Expect = 7e-39
Identities = 88/176 (50%), Positives = 115/176 (65%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+TR + R+ LKRPVI+SFK DK+KNT L+AP+ES++LP+E +KEN KR R+V KR E
Sbjct: 16 GLSTRFAARLCPLKRPVIVSFKKDKTKNTTLVAPKESISLPIETSKENEKRSRRVSKRPE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
RV+AVS EA PST ELDYSEAAAKLE+IYKRS T S+ +V R
Sbjct: 76 RVHAVSM-EAFPSTSELDYSEAAAKLESIYKRSLETASSNTEVKDRLVKRRPRTRKRIVE 134
Query: 163 XXXXXXXXXENFV--RSQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
N V ++K KR+ L++RIAL K+GE V SS+++K ++ EDE
Sbjct: 135 GDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSERRKLKEDTEDE 190
>ref|XP_004234179.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X1 [Solanum
lycopersicum]
Length = 516
Score = 147 bits (372), Expect = 9e-39
Identities = 89/180 (49%), Positives = 120/180 (66%), Gaps = 6/180 (3%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL++R S R+ LKRPVI+SFK D +KNT L++P+ES++ P+E +KEN KR R+V KR+E
Sbjct: 16 GLSSRFSARLCPLKRPVIVSFKKDITKNTTLVSPKESISSPIETSKENEKRSRRVSKRTE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSDEDVXXXXXXXXXXXX 179
RV+AV T EAPPSTLELDYSEAAAKLE+IYKR SP T V D V
Sbjct: 76 RVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVE 134
Query: 178 XRNGXXXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+N V+++R K KR+ L++RIAL KEG+ +ASS+++K +++ EDE
Sbjct: 135 SDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEGKMLASSERRKLNEDTEDE 190
>gb|PHU23214.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
[Capsicum chinense]
Length = 516
Score = 143 bits (360), Expect = 5e-37
Identities = 86/176 (48%), Positives = 112/176 (63%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+TR + R+ LKRPVI+ FK DK+KNT L+AP+ES++LP+E +KEN KR R+V KR E
Sbjct: 16 GLSTRFAARLCPLKRPVIVLFKKDKTKNTTLVAPKESISLPIETSKENEKRSRRVSKRPE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSDEDVXXXXXXXXXXXXXRNGX 164
RV+AVS E PST ELDYSEAAAKLE+IYKRS T S+ +V R
Sbjct: 76 RVHAVSM-ETFPSTSELDYSEAAAKLESIYKRSLETASSNTEVKDRLVKRRPRTRKRIVE 134
Query: 163 XXXXXXXXXENFV--RSQRKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
N V ++K KR+ L++RIAL K+GE V SS ++K ++ EDE
Sbjct: 135 GDEEAKREVANNVVKNRRKKSKRLNLDQRIALLKNKDGEMVTSSARRKLEEDTEDE 190
>ref|XP_015070569.1| PREDICTED: RNA polymerase sigma factor sigE,
chloroplastic/mitochondrial isoform X2 [Solanum
pennellii]
Length = 487
Score = 137 bits (346), Expect = 3e-35
Identities = 84/162 (51%), Positives = 107/162 (66%), Gaps = 6/162 (3%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL++R S R+ LKRPVI+SFK DK+KNT L++P+ES++LP+E +KEN KR R+V KR+E
Sbjct: 16 GLSSRFSARLCPLKRPVIVSFKKDKTKNTTLVSPKESISLPIETSKENEKRSRRVTKRTE 75
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKR-----SPATTVSDEDVXXXXXXXXXXXX 179
RV+AV T EAPPSTLELDYSEAAAKLE+IYKR SP T V D V
Sbjct: 76 RVHAV-TIEAPPSTLELDYSEAAAKLESIYKRSLETASPNTEVKDHLVKRRPRTRKRIVE 134
Query: 178 XRNGXXXXXXXXXXENFVRSQR-KGKRMGLEKRIALKMKKEG 56
+N V+++R K KR+ L++RIAL KEG
Sbjct: 135 SDE----EAKKEVVDNVVKNRRKKSKRLNLDQRIALLKNKEG 172
>gb|PNT09190.1| hypothetical protein POPTR_012G031100v3 [Populus trichocarpa]
Length = 258
Score = 132 bits (332), Expect = 5e-35
Identities = 81/176 (46%), Positives = 109/176 (61%), Gaps = 2/176 (1%)
Frame = -3
Query: 523 GLNTRCSTRVSVLKRPVILSFKSDKSKNTALIAPRESVALPVEVNKENGKRLRKVKKRSE 344
GL+T+ ST S KRP+I++FK+DKS NT+L+AP E + LPVE K KRL K KK S
Sbjct: 16 GLSTKFSTYGSTAKRPLIVAFKADKSNNTSLVAPHEQIPLPVETTK-GKKRLGKSKKSSN 74
Query: 343 RVNAVSTDEAPPSTLELDYSEAAAKLENIYKRSPATTVSD-EDVXXXXXXXXXXXXXRNG 167
R+ AV T E P TL +DY+EAAAKLENIYK SP T SD ED +
Sbjct: 75 RLKAVRT-EVSPCTLLVDYNEAAAKLENIYKLSPGTDTSDVEDASGVIRRGRQRKRKISE 133
Query: 166 XXXXXXXXXXENFVRSQ-RKGKRMGLEKRIALKMKKEGEFVASSQKKKDSKNDEDE 2
+ VR++ +K KR+ LEKRI+L++K E + V+S+ K+KD KN+ ++
Sbjct: 134 GDKETEDRTSKIIVRNRAKKAKRLSLEKRISLRIKNEEKLVSSAGKRKDRKNENEK 189