BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00006134
         (447 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF,...   261   3e-82
ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF,...   261   3e-82
ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplas...   258   6e-82
ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplas...   258   3e-81
gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus im...   242   6e-75
gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [...   233   3e-72
emb|CDP06761.1| unnamed protein product [Coffea canephora]            233   1e-71
gb|PKI57600.1| hypothetical protein CRG98_021928 [Punica granatum]    220   1e-70
gb|EPS66259.1| hypothetical protein M569_08519 [Genlisea aurea]       217   6e-70
gb|AKC88770.1| sigma factor [Francoa sonchifolia]                     228   2e-69
ref|XP_019250683.1| PREDICTED: RNA polymerase sigma factor sigF,...   223   1e-67
ref|XP_009794392.1| PREDICTED: RNA polymerase sigma factor sigF,...   222   2e-67
gb|ONI03025.1| hypothetical protein PRUPE_6G234100 [Prunus persica]   218   4e-67
ref|XP_009794385.1| PREDICTED: RNA polymerase sigma factor sigF,...   222   4e-67
ref|XP_009621232.1| PREDICTED: RNA polymerase sigma factor sigF,...   221   6e-67
ref|XP_016487689.1| PREDICTED: RNA polymerase sigma factor sigF,...   221   1e-66
ref|XP_017612735.1| PREDICTED: RNA polymerase sigma factor sigF,...   221   1e-66
ref|XP_016738386.1| PREDICTED: RNA polymerase sigma factor sigF,...   221   1e-66
ref|XP_016738385.1| PREDICTED: RNA polymerase sigma factor sigF,...   221   1e-66
ref|XP_017612734.1| PREDICTED: RNA polymerase sigma factor sigF,...   221   1e-66

>ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X2 [Erythranthe guttata]
          Length = 558

 Score =  261 bits (667), Expect = 3e-82
 Identities = 126/148 (85%), Positives = 142/148 (95%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKVYEAKK+C++QGNH PTKEDIAA AGLSVE+L++LLYT+RVPLSMQ+PVWMD
Sbjct: 398 NVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPVWMD 457

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITADT +E P+VGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIE GEQKSLS
Sbjct: 458 QDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLS 517

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           +IG GFGLSKER+RQ+ESRALYKLKQCL
Sbjct: 518 DIGAGFGLSKERIRQIESRALYKLKQCL 545


>ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X1 [Erythranthe guttata]
 gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Erythranthe guttata]
          Length = 559

 Score =  261 bits (667), Expect = 3e-82
 Identities = 126/148 (85%), Positives = 142/148 (95%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKVYEAKK+C++QGNH PTKEDIAA AGLSVE+L++LLYT+RVPLSMQ+PVWMD
Sbjct: 399 NVYTLLSKVYEAKKTCIKQGNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPVWMD 458

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITADT +E P+VGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIE GEQKSLS
Sbjct: 459 QDTTFQEITADTAVEAPDVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLS 518

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           +IG GFGLSKER+RQ+ESRALYKLKQCL
Sbjct: 519 DIGAGFGLSKERIRQIESRALYKLKQCL 546


>ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
           indicum]
 ref|XP_011094633.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
           indicum]
          Length = 496

 Score =  258 bits (660), Expect = 6e-82
 Identities = 127/148 (85%), Positives = 140/148 (94%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVYSLLS+VYEAKK C+QQGNH PTKEDIAACAG+SVE LE+LLYTAR+PLS+Q+PVW D
Sbjct: 336 NVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGMSVEGLERLLYTARMPLSLQKPVWTD 395

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITADTTIEVP+VG +KQ+MRQH RNLLSVL+PRERKIIRLRFGIE GEQKSLS
Sbjct: 396 QDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLS 455

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG GFGLSKERVRQLESRALYKLKQCL
Sbjct: 456 EIGAGFGLSKERVRQLESRALYKLKQCL 483


>ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Sesamum
           indicum]
          Length = 561

 Score =  258 bits (660), Expect = 3e-81
 Identities = 127/148 (85%), Positives = 140/148 (94%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVYSLLS+VYEAKK C+QQGNH PTKEDIAACAG+SVE LE+LLYTAR+PLS+Q+PVW D
Sbjct: 401 NVYSLLSRVYEAKKLCIQQGNHLPTKEDIAACAGMSVEGLERLLYTARMPLSLQKPVWTD 460

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITADTTIEVP+VG +KQ+MRQH RNLLSVL+PRERKIIRLRFGIE GEQKSLS
Sbjct: 461 QDTTFQEITADTTIEVPDVGVAKQLMRQHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLS 520

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG GFGLSKERVRQLESRALYKLKQCL
Sbjct: 521 EIGAGFGLSKERVRQLESRALYKLKQCL 548


>gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus impetiginosus]
          Length = 547

 Score =  242 bits (617), Expect = 6e-75
 Identities = 117/148 (79%), Positives = 134/148 (90%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           N+Y  L+KV+EAKK C Q+GNH+PTKEDIAACAG++VE+LE LLYTAR+PLSMQQ VW D
Sbjct: 387 NMYGHLTKVHEAKKLCFQKGNHHPTKEDIAACAGMTVEKLETLLYTARLPLSMQQTVWTD 446

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TTYQEITADT IE+P++  SKQ+MRQH RNLLSVLNPRERKIIRLRFGIE G+ KSLS
Sbjct: 447 QDTTYQEITADTAIEIPDIAVSKQLMRQHVRNLLSVLNPRERKIIRLRFGIEDGKLKSLS 506

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG GFGL+KERVRQLESRA+YKLKQCL
Sbjct: 507 EIGDGFGLTKERVRQLESRAMYKLKQCL 534


>gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [Dorcoceras
           hygrometricum]
          Length = 492

 Score =  233 bits (595), Expect = 3e-72
 Identities = 113/148 (76%), Positives = 130/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKV+EAKK C+QQG H P  EDIAACAG+ VERLE LL+TAR+P+SMQQP+WMD
Sbjct: 332 NVYGLLSKVFEAKKVCIQQGTHNPKIEDIAACAGMKVERLESLLFTARMPISMQQPIWMD 391

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITAD +IE PE+ A KQ+MRQH RNLL +LN RERKIIRLRFGIE G+Q+SLS
Sbjct: 392 QDTTFQEITADPSIETPELSAEKQLMRQHIRNLLGILNTRERKIIRLRFGIEDGKQRSLS 451

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGL+KERVRQLESRALYKL+QCL
Sbjct: 452 EIGAVFGLTKERVRQLESRALYKLRQCL 479


>emb|CDP06761.1| unnamed protein product [Coffea canephora]
          Length = 556

 Score =  233 bits (595), Expect = 1e-71
 Identities = 114/148 (77%), Positives = 132/148 (89%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKV EAKK C+QQG H PTKE+IA+CAG++VE+LEKLL+TAR+PLSMQQPVWMD
Sbjct: 396 NVYGLLSKVKEAKKLCIQQGIHSPTKEEIASCAGITVEKLEKLLFTARMPLSMQQPVWMD 455

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QE+TADT IE  ++  SKQ+MR H RNLL +LNP+ERKIIRLRFGIE G+QKSLS
Sbjct: 456 QDTTFQEVTADTAIEASDLSVSKQLMRIHIRNLLRILNPKERKIIRLRFGIEDGKQKSLS 515

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLE+RALYKLKQCL
Sbjct: 516 EIGAVFGLSKERVRQLETRALYKLKQCL 543


>gb|PKI57600.1| hypothetical protein CRG98_021928 [Punica granatum]
          Length = 206

 Score =  220 bits (561), Expect = 1e-70
 Identities = 108/148 (72%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LL+KV EAK+S VQ+GN+ P+KE IA   G++V++LEKL+ T R PLSMQQPVWMD
Sbjct: 46  NVYGLLNKVMEAKRSYVQEGNYRPSKEQIAKRVGITVDKLEKLMVTTRTPLSMQQPVWMD 105

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q TT+QEITADT IE+P+V  +KQ+MRQH RNLL +L+P+ER+IIRLRFGIE GEQKSLS
Sbjct: 106 QETTFQEITADTGIEIPDVSVTKQLMRQHVRNLLGILSPKERRIIRLRFGIEDGEQKSLS 165

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLE+RALYKLKQCL
Sbjct: 166 EIGDIFGLSKERVRQLENRALYKLKQCL 193


>gb|EPS66259.1| hypothetical protein M569_08519 [Genlisea aurea]
          Length = 164

 Score =  217 bits (552), Expect = 6e-70
 Identities = 101/148 (68%), Positives = 126/148 (85%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKVYEA+  C+QQG   P+KE++A+CAG+SVE+L+ LL T R PLS+QQPVW D
Sbjct: 4   NVYGLLSKVYEARNQCIQQGKSNPSKEELASCAGMSVEKLDALLRTTRTPLSLQQPVWSD 63

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q TT+ EITAD  +E P+V A+K +MR+HTRNLLS LNPRERKI+RLRFG+E G+Q+SLS
Sbjct: 64  QATTFLEITADMEVEAPDVAATKHLMRRHTRNLLSFLNPRERKILRLRFGLEDGKQRSLS 123

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           +IG G GL+KER+RQLE+RA+YKLKQCL
Sbjct: 124 DIGNGLGLTKERIRQLENRAMYKLKQCL 151


>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
          Length = 549

 Score =  228 bits (580), Expect = 2e-69
 Identities = 109/148 (73%), Positives = 130/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LL KV EAKKSC+Q+GNH PTKE++A   G++VE+LEKLLYT R+PLSMQQPVW  
Sbjct: 389 NVYTLLGKVLEAKKSCIQEGNHRPTKEELARRVGITVEKLEKLLYTTRMPLSMQQPVWAG 448

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEI ADT IE+P++   KQ+MRQH RNLLS+L+P+ER+IIRLRFGIE G+QKSLS
Sbjct: 449 QDTTFQEIIADTEIEIPDISVGKQMMRQHVRNLLSILSPKERRIIRLRFGIEDGKQKSLS 508

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLESRALY+LKQCL
Sbjct: 509 EIGAVFGLSKERVRQLESRALYRLKQCL 536


>ref|XP_019250683.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
           [Nicotiana attenuata]
 gb|OIT01336.1| rna polymerase sigma factor sigf, chloroplastic [Nicotiana
           attenuata]
          Length = 571

 Score =  223 bits (569), Expect = 1e-67
 Identities = 111/148 (75%), Positives = 129/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKV +AKK C+QQGNH+PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 411 NVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQLVWTD 470

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITAD  IE PE+  SKQ+MR+H RNLL+VL+P+ERKIIRLRFGI  GE+KSLS
Sbjct: 471 QDTTFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLS 530

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLESRALY+LKQ L
Sbjct: 531 EIGAVFGLSKERVRQLESRALYRLKQNL 558


>ref|XP_009794392.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X2 [Nicotiana sylvestris]
 ref|XP_016467963.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Nicotiana tabacum]
          Length = 545

 Score =  222 bits (566), Expect = 2e-67
 Identities = 110/148 (74%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKV +AKK C+QQGNH+PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 385 NVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 444

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+ T+QEITAD  IE PE+  SKQ+MR+H RNLL+VL+P+ERKIIRLRFGI  GE+KSLS
Sbjct: 445 QDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLS 504

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLESRALY+LKQ L
Sbjct: 505 EIGAVFGLSKERVRQLESRALYRLKQNL 532


>gb|ONI03025.1| hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 422

 Score =  218 bits (556), Expect = 4e-67
 Identities = 105/148 (70%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVYSLL KV EAKKSC+Q+GNH P KE++A   G++VE+LEKLLY  R+PLSMQQPVW D
Sbjct: 262 NVYSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWAD 321

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QE+TADT +E+P+V  +KQ+MRQH R+LLS+LN RER+IIRLR+GIE G+Q+SLS
Sbjct: 322 QDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLS 381

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIGG FGLSKERVRQLESRA  KL+Q L
Sbjct: 382 EIGGMFGLSKERVRQLESRAFLKLRQSL 409


>ref|XP_009794385.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform
           X1 [Nicotiana sylvestris]
 ref|XP_016467962.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Nicotiana tabacum]
          Length = 572

 Score =  222 bits (566), Expect = 4e-67
 Identities = 110/148 (74%), Positives = 128/148 (86%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKV +AKK C+QQGNH+PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 412 NVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 471

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+ T+QEITAD  IE PE+  SKQ+MR+H RNLL+VL+P+ERKIIRLRFGI  GE+KSLS
Sbjct: 472 QDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLS 531

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLESRALY+LKQ L
Sbjct: 532 EIGAVFGLSKERVRQLESRALYRLKQNL 559


>ref|XP_009621232.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 544

 Score =  221 bits (563), Expect = 6e-67
 Identities = 110/148 (74%), Positives = 129/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKV +AKK C+QQGN +PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 384 NVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 443

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITAD+ IE PE+  SKQ+MR+H RNLL+VLNP+ERKIIRLRFGI  G++KSLS
Sbjct: 444 QDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVLNPKERKIIRLRFGIGDGKRKSLS 503

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLESRALYKLK+ L
Sbjct: 504 EIGAVFGLSKERVRQLESRALYKLKKNL 531


>ref|XP_016487689.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           [Nicotiana tabacum]
          Length = 572

 Score =  221 bits (563), Expect = 1e-66
 Identities = 110/148 (74%), Positives = 129/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY+LLSKV +AKK C+QQGN +PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 412 NVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 471

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QEITAD+ IE PE+  SKQ+MR+H RNLL+VLNP+ERKIIRLRFGI  G++KSLS
Sbjct: 472 QDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVLNPKERKIIRLRFGIGDGKRKSLS 531

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  FGLSKERVRQLESRALYKLK+ L
Sbjct: 532 EIGAVFGLSKERVRQLESRALYKLKKNL 559


>ref|XP_017612735.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X2 [Gossypium arboreum]
          Length = 565

 Score =  221 bits (562), Expect = 1e-66
 Identities = 105/148 (70%), Positives = 130/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKV +AK+SC+Q+GNHYP+KE++A   G++VE+L+KLL + R+PLSMQQPVW+D
Sbjct: 405 NVYGLLSKVLDAKRSCIQEGNHYPSKEELARRVGITVEKLDKLLLSTRMPLSMQQPVWVD 464

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QE+T DT IE+P+V  +KQ+MRQH RNLLS+L+P+ERKIIRLRFGIE  +Q SLS
Sbjct: 465 QDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSILSPKERKIIRLRFGIEESKQNSLS 524

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  F LSKERVRQLESRALYKLKQCL
Sbjct: 525 EIGKMFRLSKERVRQLESRALYKLKQCL 552


>ref|XP_016738386.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X4 [Gossypium hirsutum]
          Length = 565

 Score =  221 bits (562), Expect = 1e-66
 Identities = 105/148 (70%), Positives = 130/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKV +AK+SC+Q+GNHYP+KE++A   G++VE+L+KLL + R+PLSMQQPVW+D
Sbjct: 405 NVYGLLSKVLDAKRSCIQEGNHYPSKEELARRVGITVEKLDKLLLSTRMPLSMQQPVWVD 464

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QE+T DT IE+P+V  +KQ+MRQH RNLLS+L+P+ERKIIRLRFGIE  +Q SLS
Sbjct: 465 QDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSILSPKERKIIRLRFGIEESKQNSLS 524

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  F LSKERVRQLESRALYKLKQCL
Sbjct: 525 EIGKMFRLSKERVRQLESRALYKLKQCL 552


>ref|XP_016738385.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X3 [Gossypium hirsutum]
          Length = 567

 Score =  221 bits (562), Expect = 1e-66
 Identities = 105/148 (70%), Positives = 130/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKV +AK+SC+Q+GNHYP+KE++A   G++VE+L+KLL + R+PLSMQQPVW+D
Sbjct: 407 NVYGLLSKVLDAKRSCIQEGNHYPSKEELARRVGITVEKLDKLLLSTRMPLSMQQPVWVD 466

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QE+T DT IE+P+V  +KQ+MRQH RNLLS+L+P+ERKIIRLRFGIE  +Q SLS
Sbjct: 467 QDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSILSPKERKIIRLRFGIEESKQNSLS 526

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  F LSKERVRQLESRALYKLKQCL
Sbjct: 527 EIGKMFRLSKERVRQLESRALYKLKQCL 554


>ref|XP_017612734.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
           isoform X1 [Gossypium arboreum]
 gb|KHG05515.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 567

 Score =  221 bits (562), Expect = 1e-66
 Identities = 105/148 (70%), Positives = 130/148 (87%)
 Frame = -3

Query: 445 NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 266
           NVY LLSKV +AK+SC+Q+GNHYP+KE++A   G++VE+L+KLL + R+PLSMQQPVW+D
Sbjct: 407 NVYGLLSKVLDAKRSCIQEGNHYPSKEELARRVGITVEKLDKLLLSTRMPLSMQQPVWVD 466

Query: 265 QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 86
           Q+TT+QE+T DT IE+P+V  +KQ+MRQH RNLLS+L+P+ERKIIRLRFGIE  +Q SLS
Sbjct: 467 QDTTFQEVTPDTGIEIPDVSVAKQLMRQHVRNLLSILSPKERKIIRLRFGIEESKQNSLS 526

Query: 85  EIGGGFGLSKERVRQLESRALYKLKQCL 2
           EIG  F LSKERVRQLESRALYKLKQCL
Sbjct: 527 EIGKMFRLSKERVRQLESRALYKLKQCL 554