BLASTX nr result

ID: Rehmannia30_contig00005974 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00005974
         (400 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073362.1| uncharacterized protein LOC105158336 [Sesamu...    82   1e-15
gb|PIN00080.1| Mitochondrial/choloroplast ribosomal protein S15 ...    68   1e-10
gb|PIN05976.1| Mitochondrial/choloroplast ribosomal protein S15 ...    68   2e-10
gb|PIN18672.1| Mitochondrial/choloroplast ribosomal protein S15 ...    62   1e-08

>ref|XP_011073362.1| uncharacterized protein LOC105158336 [Sesamum indicum]
          Length = 449

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 54/115 (46%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
 Frame = +2

Query: 62  YLTDVKASLQREPPPQNRPQL-RKPLXXXXXXXXXXXXXXRIAYLEEIRRNLSEFXXXXX 238
           Y +DVK++LQREP  QNRPQL RKP+              ++A LEEIRRNLSEF     
Sbjct: 55  YFSDVKSTLQREPTQQNRPQLFRKPVASSSNAPPP-----KLASLEEIRRNLSEFRSRSA 109

Query: 239 XXXXXXXXGQTISLQELYKRN-IPXXXXXXXXXXXXXVKTPIGPSFGPIRESLQQ 400
                   GQ ISLQELYKRN I               K+P GPS+  IRESL+Q
Sbjct: 110 PPPPSSASGQYISLQELYKRNVIAKNDDSAASSDSPAAKSPSGPSYDAIRESLRQ 164


>gb|PIN00080.1| Mitochondrial/choloroplast ribosomal protein S15 [Handroanthus
           impetiginosus]
          Length = 444

 Score = 68.2 bits (165), Expect = 1e-10
 Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
 Frame = +2

Query: 68  TDVKASLQREPPPQNRPQL-RKPLXXXXXXXXXXXXXXRIAYLEEIRRNLSEFXXXXXXX 244
           T+VKA+LQ+EPPP NRP   RKP               ++  LE+IRRN+S F       
Sbjct: 53  TEVKATLQKEPPPHNRPHPPRKPFATPPRAPPRP----KLPSLEDIRRNISGFRIPSASS 108

Query: 245 XXXXXXGQTISLQELYKRN-IPXXXXXXXXXXXXXVKTPIGPSFGPIRESLQQ 400
                  + +SLQELYKRN I              VK PIGPSF  IR+ ++Q
Sbjct: 109 PPSSGSSKYVSLQELYKRNVIGKADASATSSNSSAVKPPIGPSFDAIRDGIRQ 161


>gb|PIN05976.1| Mitochondrial/choloroplast ribosomal protein S15 [Handroanthus
           impetiginosus]
          Length = 444

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
 Frame = +2

Query: 68  TDVKASLQREPPPQNRPQL-RKPLXXXXXXXXXXXXXXRIAYLEEIRRNLSEFXXXXXXX 244
           T+VKA+LQ+EPPP NRP   RKP               ++  LE+IRRN+S F       
Sbjct: 53  TEVKATLQKEPPPYNRPHPPRKPFATPPRAPPRP----KLPSLEDIRRNISGFRIPSASS 108

Query: 245 XXXXXXGQTISLQELYKRN-IPXXXXXXXXXXXXXVKTPIGPSFGPIRESLQQ 400
                  + +SLQELYKRN I              VK PIGPSF  IR+ ++Q
Sbjct: 109 PPSSGSSKYVSLQELYKRNVIGKADASATSSNSSAVKPPIGPSFDAIRDGIRQ 161


>gb|PIN18672.1| Mitochondrial/choloroplast ribosomal protein S15 [Handroanthus
           impetiginosus]
          Length = 463

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 35/82 (42%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +2

Query: 62  YLTDVKASLQREPPPQNRPQ-LRKPLXXXXXXXXXXXXXXRIAYLEEIRRNLSEFXXXXX 238
           +  D+KASLQREPPPQ+R Q  RKP                 ++ EEIRRN+SEF     
Sbjct: 62  FFDDIKASLQREPPPQDRQQTFRKPFSFSNRTRQTPPPSKEASF-EEIRRNISEFRLRSA 120

Query: 239 XXXXXXXXGQTISLQELYKRNI 304
                   GQ +S+QELYK+N+
Sbjct: 121 APPPSSSSGQYVSMQELYKKNV 142


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