BLASTX nr result
ID: Rehmannia30_contig00004727
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00004727
(425 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN78338.1| hypothetical protein VITISV_004622 [Vitis vinifera] 191 2e-60
gb|AGM38071.1| putative fibrillarin, partial [Stenocereus gummosus] 191 6e-60
gb|KZV28687.1| putative mediator of RNA polymerase II transcript... 196 7e-60
gb|KZV41029.1| putative mediator of RNA polymerase II transcript... 196 1e-59
gb|PKI50746.1| hypothetical protein CRG98_028888 [Punica granatum] 189 2e-59
ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II tra... 195 2e-59
gb|PIN25086.1| Fibrillarin [Handroanthus impetiginosus] 195 2e-59
dbj|BAF95852.1| putative fibrillarin, partial [Vitis hybrid cult... 191 3e-59
ref|XP_015070794.1| PREDICTED: probable mediator of RNA polymera... 194 3e-59
ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II tra... 194 3e-59
ref|XP_016564543.1| PREDICTED: mediator of RNA polymerase II tra... 194 4e-59
gb|PHT87300.1| rRNA 2'-O-methyltransferase fibrillarin [Capsicum... 194 5e-59
ref|XP_009625367.1| PREDICTED: mediator of RNA polymerase II tra... 193 9e-59
emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana] 193 9e-59
ref|NP_001311935.1| mediator of RNA polymerase II transcription ... 193 9e-59
ref|XP_010275653.1| PREDICTED: probable mediator of RNA polymera... 193 9e-59
ref|XP_010255302.1| PREDICTED: probable mediator of RNA polymera... 193 9e-59
emb|CBI22679.3| unnamed protein product, partial [Vitis vinifera] 191 9e-59
ref|XP_011084445.1| mediator of RNA polymerase II transcription ... 193 1e-58
ref|XP_022851956.1| mediator of RNA polymerase II transcription ... 192 2e-58
>emb|CAN78338.1| hypothetical protein VITISV_004622 [Vitis vinifera]
Length = 121
Score = 191 bits (485), Expect = 2e-60
Identities = 95/101 (94%), Positives = 97/101 (96%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 21 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 80
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQAD FKP EQVTLEPFERDHACVVGGYR+PKKQK A
Sbjct: 81 VKKLQADMFKPSEQVTLEPFERDHACVVGGYRMPKKQKPTA 121
>gb|AGM38071.1| putative fibrillarin, partial [Stenocereus gummosus]
Length = 157
Score = 191 bits (485), Expect = 6e-60
Identities = 94/100 (94%), Positives = 98/100 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFA E
Sbjct: 56 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASE 115
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTA 124
VKKLQ DQFKP+EQVTLEPFERDHACVVGGYR+PKKQK+A
Sbjct: 116 VKKLQQDQFKPMEQVTLEPFERDHACVVGGYRMPKKQKSA 155
>gb|KZV28687.1| putative mediator of RNA polymerase II transcription subunit 36b
[Dorcoceras hygrometricum]
Length = 310
Score = 196 bits (498), Expect = 7e-60
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 210 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 269
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQADQFKP EQVTLEPFERDHACVVGGYRVPK+QKT A
Sbjct: 270 VKKLQADQFKPAEQVTLEPFERDHACVVGGYRVPKRQKTTA 310
>gb|KZV41029.1| putative mediator of RNA polymerase II transcription subunit 36b
[Dorcoceras hygrometricum]
Length = 313
Score = 196 bits (497), Expect = 1e-59
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 213 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 272
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKT 127
VKKLQADQFKP EQVTLEPFERDHACVVGGYRVPKKQKT
Sbjct: 273 VKKLQADQFKPAEQVTLEPFERDHACVVGGYRVPKKQKT 311
>gb|PKI50746.1| hypothetical protein CRG98_028888 [Punica granatum]
Length = 121
Score = 189 bits (479), Expect = 2e-59
Identities = 93/101 (92%), Positives = 97/101 (96%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAE VFAQE
Sbjct: 21 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAETVFAQE 80
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QF+P EQVTLEPFERDHACVVGGYR+PKKQK A
Sbjct: 81 VKKLQAEQFRPSEQVTLEPFERDHACVVGGYRMPKKQKPVA 121
>ref|XP_006353900.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum tuberosum]
Length = 314
Score = 195 bits (496), Expect = 2e-59
Identities = 98/101 (97%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 214 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 273
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQADQFKPVEQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 274 VKKLQADQFKPVEQVTLEPFERDHACVVGTYRVPKKQKAAA 314
>gb|PIN25086.1| Fibrillarin [Handroanthus impetiginosus]
Length = 306
Score = 195 bits (495), Expect = 2e-59
Identities = 96/101 (95%), Positives = 100/101 (99%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNAS+FLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 206 YRMLVGMVDVIFSDVAQPDQARILALNASFFLKAGGHFVISIKANCIDSTVPAEAVFAQE 265
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQADQFKP+EQVTLEPFERDHACVVGGYR+PKKQK AA
Sbjct: 266 VKKLQADQFKPIEQVTLEPFERDHACVVGGYRMPKKQKPAA 306
>dbj|BAF95852.1| putative fibrillarin, partial [Vitis hybrid cultivar]
Length = 204
Score = 191 bits (485), Expect = 3e-59
Identities = 95/101 (94%), Positives = 97/101 (96%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 104 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 163
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQAD FKP EQVTLEPFERDHACVVGGYR+PKKQK A
Sbjct: 164 VKKLQADMFKPSEQVTLEPFERDHACVVGGYRMPKKQKPTA 204
>ref|XP_015070794.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b [Solanum pennellii]
Length = 313
Score = 194 bits (494), Expect = 3e-59
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 213 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 272
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKPVEQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 273 VKKLQAEQFKPVEQVTLEPFERDHACVVGAYRVPKKQKAAA 313
>ref|XP_004234430.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Solanum lycopersicum]
Length = 314
Score = 194 bits (494), Expect = 3e-59
Identities = 97/101 (96%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 214 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 273
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKPVEQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 274 VKKLQAEQFKPVEQVTLEPFERDHACVVGAYRVPKKQKAAA 314
>ref|XP_016564543.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Capsicum annuum]
gb|PHT53207.1| rRNA 2'-O-methyltransferase fibrillarin [Capsicum baccatum]
gb|PHU23119.1| rRNA 2'-O-methyltransferase fibrillarin [Capsicum chinense]
Length = 314
Score = 194 bits (493), Expect = 4e-59
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 214 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 273
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP+EQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 274 VKKLQAEQFKPIEQVTLEPFERDHACVVGAYRVPKKQKAAA 314
>gb|PHT87300.1| rRNA 2'-O-methyltransferase fibrillarin [Capsicum annuum]
Length = 317
Score = 194 bits (493), Expect = 5e-59
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 217 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 276
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP+EQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 277 VKKLQAEQFKPIEQVTLEPFERDHACVVGAYRVPKKQKAAA 317
>ref|XP_009625367.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Nicotiana tomentosiformis]
ref|XP_016454846.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Nicotiana tabacum]
Length = 314
Score = 193 bits (491), Expect = 9e-59
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 214 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 273
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP+EQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 274 VKKLQAEQFKPMEQVTLEPFERDHACVVGAYRVPKKQKAAA 314
>emb|CAR92137.1| fibrillarin 2 [Nicotiana benthamiana]
Length = 314
Score = 193 bits (491), Expect = 9e-59
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 214 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 273
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP+EQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 274 VKKLQAEQFKPMEQVTLEPFERDHACVVGAYRVPKKQKAAA 314
>ref|NP_001311935.1| mediator of RNA polymerase II transcription subunit 36a-like
[Nicotiana tabacum]
ref|XP_009775347.1| PREDICTED: mediator of RNA polymerase II transcription subunit
36a-like [Nicotiana sylvestris]
dbj|BAE91898.1| tobacco fibrillarin homolog [Nicotiana tabacum]
Length = 314
Score = 193 bits (491), Expect = 9e-59
Identities = 96/101 (95%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 214 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 273
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP+EQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 274 VKKLQAEQFKPMEQVTLEPFERDHACVVGAYRVPKKQKAAA 314
>ref|XP_010275653.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b [Nelumbo nucifera]
Length = 303
Score = 193 bits (490), Expect = 9e-59
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLK GGHFVISIKANCIDSTVPAEAVF QE
Sbjct: 203 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTVPAEAVFVQE 262
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQADQFKP EQVTLEPFERDHACVVGGYR+PKKQKTAA
Sbjct: 263 VKKLQADQFKPSEQVTLEPFERDHACVVGGYRMPKKQKTAA 303
>ref|XP_010255302.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 36b [Nelumbo nucifera]
Length = 303
Score = 193 bits (490), Expect = 9e-59
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLK GGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 203 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKNGGHFVISIKANCIDSTVPAEAVFAQE 262
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQADQFKP EQVTLEPFERDHACVVGGYR+PKKQKT A
Sbjct: 263 VKKLQADQFKPSEQVTLEPFERDHACVVGGYRMPKKQKTGA 303
>emb|CBI22679.3| unnamed protein product, partial [Vitis vinifera]
Length = 245
Score = 191 bits (485), Expect = 9e-59
Identities = 95/101 (94%), Positives = 97/101 (96%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 145 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 204
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQAD FKP EQVTLEPFERDHACVVGGYR+PKKQK A
Sbjct: 205 VKKLQADMFKPSEQVTLEPFERDHACVVGGYRMPKKQKPTA 245
>ref|XP_011084445.1| mediator of RNA polymerase II transcription subunit 36a [Sesamum
indicum]
Length = 315
Score = 193 bits (490), Expect = 1e-58
Identities = 95/101 (94%), Positives = 99/101 (98%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 215 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 274
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP EQVTLEPFERDHACVVGGYR+PKKQK A+
Sbjct: 275 VKKLQAEQFKPAEQVTLEPFERDHACVVGGYRMPKKQKAAS 315
>ref|XP_022851956.1| mediator of RNA polymerase II transcription subunit 36a-like [Olea
europaea var. sylvestris]
Length = 308
Score = 192 bits (488), Expect = 2e-58
Identities = 96/101 (95%), Positives = 98/101 (97%)
Frame = -3
Query: 423 YRMLVGIVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 244
YRMLVG+VDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE
Sbjct: 208 YRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFAQE 267
Query: 243 VKKLQADQFKPVEQVTLEPFERDHACVVGGYRVPKKQKTAA 121
VKKLQA+QFKP EQVTLEPFERDHACVVG YRVPKKQK AA
Sbjct: 268 VKKLQAEQFKPSEQVTLEPFERDHACVVGAYRVPKKQKAAA 308