BLASTX nr result
ID: Rehmannia30_contig00004530
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00004530
(5362 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099129.1| DNA-directed RNA polymerase II subunit 1 [Se... 2994 0.0
gb|PIN22778.1| RNA polymerase II, large subunit [Handroanthus im... 2991 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 2971 0.0
ref|XP_011073958.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme... 2955 0.0
ref|XP_016560439.1| PREDICTED: DNA-directed RNA polymerase II su... 2911 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2907 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2904 0.0
ref|XP_016440712.1| PREDICTED: DNA-directed RNA polymerase II su... 2902 0.0
ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II su... 2902 0.0
ref|XP_019228036.1| PREDICTED: DNA-directed RNA polymerase II su... 2898 0.0
ref|XP_016502102.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0
ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2873 0.0
ref|XP_019182613.1| PREDICTED: DNA-directed RNA polymerase II su... 2859 0.0
gb|PHT56449.1| DNA-directed RNA polymerase II subunit RPB1 [Caps... 2855 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2850 0.0
gb|OVA15969.1| RNA polymerase II [Macleaya cordata] 2848 0.0
ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II su... 2840 0.0
ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [He... 2838 0.0
gb|PKI74424.1| hypothetical protein CRG98_005188 [Punica granatum] 2833 0.0
>ref|XP_011099129.1| DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2994 bits (7762), Expect = 0.0
Identities = 1491/1537 (97%), Positives = 1517/1537 (98%), Gaps = 2/1537 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFP+SPAEVAK+RVVQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEEDPK
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 750
FKQA+RIRNPKNRL+KILDACKNKSKCEGGDEIDVQGQD+ EP+KK+RGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYK+QKKKNDDPEQMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWHQE+EKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
LESLKLK+ DFNDMY+YEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR+Q
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDNSWPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEN+GFKA
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYME-GGLDFGMTPARSPLTG 4707
LRGVTENIMLGQLAPIGTGDCAL LNEEMLKQAIEIPLPSYME GGL+FGMTPARSPLTG
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 4708 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
TPYHDGMMSP+YLLSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>gb|PIN22778.1| RNA polymerase II, large subunit [Handroanthus impetiginosus]
Length = 1847
Score = 2991 bits (7753), Expect = 0.0
Identities = 1486/1536 (96%), Positives = 1515/1536 (98%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEE+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEEPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 750
FKQA+RIRNPKNRL+KILDACKNK+KCEGGDEIDVQGQD+ EP+KKSRGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKAKCEGGDEIDVQGQDTDEPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKKNDD EQ+PEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPVPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDMHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWHQE+EKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVK+LIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKDLIRAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
LESLKLK++DFNDMYKYEID+PNWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEADR+Q
Sbjct: 901 LESLKLKKSDFNDMYKYEIDSPNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDNSWPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
PDV KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINQEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKF+EN+GFKA
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFEENEGFKA 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
ENEWMLDTEGVNLLAVMCHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDS 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDC+L LNEEMLK AIEIPLP YMEGGLDFGMTPARSPLTGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNEEMLKNAIEIPLPGYMEGGLDFGMTPARSPLTGT 1500
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSP+YLLSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1536
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttata]
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 2971 bits (7701), Expect = 0.0
Identities = 1482/1537 (96%), Positives = 1505/1537 (97%), Gaps = 2/1537 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEE+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRLRKILDACKNK+KC+GGDEID QD+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKK+DD +QMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWHQE EKGFITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
LESLKLK++DFNDMYKYEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEV KLE DRFQ
Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLS EAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
PDVSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
ENEWMLDTEGVNLLAVMCHE+VD RRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDCALLLNE+MLKQAIEIPLPSYMEGGL+FGMTP RSP +GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500
Query: 4711 PYHDGMMSPNYLL-SPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLL SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_011073958.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like
[Sesamum indicum]
Length = 1843
Score = 2955 bits (7660), Expect = 0.0
Identities = 1468/1540 (95%), Positives = 1507/1540 (97%), Gaps = 5/1540 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIG----GLSDPR 381
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ET ERGKPKIG GLSD R
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLR 60
Query: 382 LGTIDRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADE 561
LGTI +KMKCETCM+NMAECPGHFGHLELAKPMFHIGFMK VLSILRSVCFNCSKILADE
Sbjct: 61 LGTIGKKMKCETCMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADE 120
Query: 562 EDPKFKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQP 738
+DPKFKQAMRIRNPKNRLRKILDACKNKSKC+GGDEIDV+GQ+ EP+KKSRGGCGAQQP
Sbjct: 121 DDPKFKQAMRIRNPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQP 180
Query: 739 KISIDGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 918
KISIDGMKMVAEYK+QKKKNDD +QMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP
Sbjct: 181 KISIDGMKMVAEYKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 240
Query: 919 KYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPA 1098
KYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK QERNGAPA
Sbjct: 241 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPA 300
Query: 1099 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 1278
HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD
Sbjct: 301 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 360
Query: 1279 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAK 1458
FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAK
Sbjct: 361 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAK 420
Query: 1459 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 1638
YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM
Sbjct: 421 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 480
Query: 1639 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGI 1818
PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELM+VPKCIVSPQ+NRPVMGI
Sbjct: 481 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGI 540
Query: 1819 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP 1998
VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIP
Sbjct: 541 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIP 600
Query: 1999 KQINLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVG 2178
KQINLLRYSAWHQE EKG+ITPGDTQVRIEKG+LLSGTLCKK LGTSTGSLIHVIWEEVG
Sbjct: 601 KQINLLRYSAWHQETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVG 660
Query: 2179 PDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQ 2358
PDAARKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKN+VKELIRAAQ
Sbjct: 661 PDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQ 720
Query: 2359 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 2538
EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI
Sbjct: 721 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 780
Query: 2539 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAM 2718
SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAM
Sbjct: 781 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 840
Query: 2719 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWI 2898
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWI
Sbjct: 841 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 900
Query: 2899 ESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEA 3078
ESQPLESLKLK++DFNDMYKYEID+ NWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEA
Sbjct: 901 ESQPLESLKLKKSDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEA 960
Query: 3079 DRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 3258
DR+QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL
Sbjct: 961 DRYQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 1020
Query: 3259 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSL 3438
KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSL
Sbjct: 1021 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 1080
Query: 3439 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 3618
VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS
Sbjct: 1081 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1140
Query: 3619 VYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMP 3798
VYL+PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMP
Sbjct: 1141 VYLRPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 1200
Query: 3799 DEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILR 3978
DEEIDP KISPWLLR+ELNREMMVDKKLSMADIAEKINLEF+DDLTCIFNDDNAEKLILR
Sbjct: 1201 DEEIDPHKISPWLLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILR 1260
Query: 3979 IRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEND 4158
IRIMNDEAPKGEL DESAEDDVFLKK+ESNMLTEMALRGIPDINKVFIKN K+NKFDEN+
Sbjct: 1261 IRIMNDEAPKGELQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENE 1320
Query: 4159 GFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 4338
GFKAENEWMLDTEGVNLLAV CHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVI
Sbjct: 1321 GFKAENEWMLDTEGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 1380
Query: 4339 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 4518
SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA
Sbjct: 1381 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 1440
Query: 4519 ETDCLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSP 4698
E DCLRGVTENIMLGQLAPIGTGDC LLLNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP
Sbjct: 1441 EMDCLRGVTENIMLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP 1500
Query: 4699 LTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
+TGTPYHDGMMSP+YLLSPNLRLSPV+DAQFSPYVGGMAF
Sbjct: 1501 VTGTPYHDGMMSPSYLLSPNLRLSPVSDAQFSPYVGGMAF 1540
>ref|XP_016560439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Capsicum annuum]
gb|PHT91022.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum annuum]
gb|PHU26901.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum chinense]
Length = 1846
Score = 2911 bits (7546), Expect = 0.0
Identities = 1445/1536 (94%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFP+SPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEEDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEEDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQ QD+E P++KSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQSQDTEEPVRKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADAATMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K++ F DMY YEID+PNWNP+YML EAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKSTFEDMYAYEIDDPNWNPSYMLLEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
L+GVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LKGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPMTDAQFSPYVGGMAF 1535
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum]
ref|XP_015065639.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
pennellii]
Length = 1846
Score = 2907 bits (7536), Expect = 0.0
Identities = 1442/1536 (93%), Positives = 1492/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K+ F+DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
tuberosum]
Length = 1839
Score = 2904 bits (7529), Expect = 0.0
Identities = 1440/1536 (93%), Positives = 1491/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQG D+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K+ F+DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_016440712.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Nicotiana tabacum]
Length = 1630
Score = 2902 bits (7522), Expect = 0.0
Identities = 1441/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K+ F+DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
tomentosiformis]
Length = 1846
Score = 2902 bits (7522), Expect = 0.0
Identities = 1441/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K+ F+DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_019228036.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
attenuata]
gb|OIT31005.1| dna-directed rna polymerase ii subunit 1 [Nicotiana attenuata]
Length = 1853
Score = 2898 bits (7512), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_016502102.1| PREDICTED: DNA-directed RNA polymerase II subunit 1, partial
[Nicotiana tabacum]
Length = 1623
Score = 2895 bits (7505), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1493/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PY DGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
sylvestris]
Length = 1846
Score = 2895 bits (7505), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1493/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PY DGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2873 bits (7449), Expect = 0.0
Identities = 1421/1536 (92%), Positives = 1485/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 750
FKQA +IRNPKNRL+KILDACKNKSKCEGGDEI+ Q DS EP+KKSRGGCGAQQPK++I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
+GMKM+AEYK+Q+KKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLR SAWH E+E GFITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK+K+ +F+ ++KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AIE+ LPSYME GLDFGMTP+RSP+TGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNYLLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_019182613.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ipomoea nil]
Length = 1832
Score = 2859 bits (7412), Expect = 0.0
Identities = 1415/1537 (92%), Positives = 1482/1537 (96%), Gaps = 2/1537 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDQRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADE++PK
Sbjct: 61 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEDEPK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKN+L+KILDACKNK+KCEGGDEI++QGQDSE P+KK +GGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNKLKKILDACKNKTKCEGGDEINLQGQDSEEPVKKPKGGCGAQQPKISI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
DGMKMVAEYKLQKKKNDDPEQMPEPVERKQ L+AEKVLSILKRI+DEDCQLLGLNPKYAR
Sbjct: 181 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQQLTAEKVLSILKRISDEDCQLLGLNPKYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
LLRYSAWH + E G+ITPGDTQVRIEKGELLSGTLCKK+LGTS+G LIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHSDAETGYITPGDTQVRIEKGELLSGTLCKKSLGTSSGGLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQ FSIGIGDTIAD+ TME IN TIS+AKN+VKELI Q+KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADSRTMENINITISDAKNKVKELIDVYQDKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTM E+FENRVNQVLNKARDDAG+ A+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMAETFENRVNQVLNKARDDAGTFAEKSLAESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+ RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDNGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
LESLK+K++ F +MYKYEID+PNWNPNYM+P+A++DL+TIREIRSVFDAEVQKLE+DR Q
Sbjct: 901 LESLKVKKSTFENMYKYEIDDPNWNPNYMIPDAIDDLRTIREIRSVFDAEVQKLESDRLQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIA GDNSWPLPVNI+R+VLNAQKTF++DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVNGDNSWPLPVNIQRMVLNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVH 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDDYLS+EAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSIEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V+KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLI EDVEFVKSYYEMPDE+I
Sbjct: 1141 PEVAKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIPEDVEFVKSYYEMPDEDI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEK+NLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKVNLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN+K+ KFD N+GFKA
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVQKFDMNEGFKA 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIE+LGIEAVRK+LLDELR VISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEILGIEAVRKSLLDELRAVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADY 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDCAL LNEEMLKQAIEIPLPSYM+GGL+FGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMDGGLEFGMTPARSPISGT 1500
Query: 4711 PY-HDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PY HDG+MSP +LSPNLR+SP +DAQFSPYV GMAF
Sbjct: 1501 PYHHDGLMSP--MLSPNLRMSPSSDAQFSPYVTGMAF 1535
>gb|PHT56449.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum baccatum]
Length = 1816
Score = 2855 bits (7402), Expect = 0.0
Identities = 1417/1506 (94%), Positives = 1464/1506 (97%), Gaps = 1/1506 (0%)
Frame = +1
Query: 304 MSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF 483
MSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF
Sbjct: 1 MSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF 60
Query: 484 HIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKNRLRKILDACKNKSKCEGG 663
HIGFMK VLSILR VCFNCSKILADEEDPKFKQAMRIRNPKNRLRK+LDACKNK+KCEGG
Sbjct: 61 HIGFMKPVLSILRCVCFNCSKILADEEDPKFKQAMRIRNPKNRLRKMLDACKNKTKCEGG 120
Query: 664 DEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQKKKNDDPEQMPEPVERKQ 840
DEIDVQ QD+E P++KSRGGCGAQQPKISIDGMKMVAEYK+QKKK+DDPEQMPEPVERKQ
Sbjct: 121 DEIDVQSQDTEEPVRKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQMPEPVERKQ 180
Query: 841 LLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSED 1020
LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQ L SVMMDTS+RSED
Sbjct: 181 QLSAERVLSILKRVSDEDCVLLGLNPEYARPDWMILQALPIPPPPVRPSVMMDTSSRSED 240
Query: 1021 DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGR 1200
DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+ATYFDN+LPGQPRATQRSGR
Sbjct: 241 DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRATQRSGR 300
Query: 1201 PIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV 1380
PIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV
Sbjct: 301 PIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV 360
Query: 1381 TPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN 1560
TPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN
Sbjct: 361 TPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN 420
Query: 1561 DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 1740
DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET
Sbjct: 421 DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 480
Query: 1741 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFD 1920
RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFD
Sbjct: 481 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFD 540
Query: 1921 GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENEKGFITPGDTQVRIEKGEL 2100
GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++EKG+ITPGDTQVRIEKGEL
Sbjct: 541 GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRIEKGEL 600
Query: 2101 LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIAD 2280
LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIAD
Sbjct: 601 LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIAD 660
Query: 2281 AATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS 2460
AATMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS
Sbjct: 661 AATMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS 720
Query: 2461 AQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDY 2640
A+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHFTKDDY
Sbjct: 721 AEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDY 780
Query: 2641 GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY 2820
GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY
Sbjct: 781 GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY 840
Query: 2821 DGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYML 3000
DGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K++ F DMY YEID+PNWNP+YML
Sbjct: 841 DGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKSTFEDMYAYEIDDPNWNPSYML 900
Query: 3001 PEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTF 3180
EAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF
Sbjct: 901 LEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTF 960
Query: 3181 KVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKNATLFFNILLRSALASKRV 3360
K+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKNATLFFNILLRSALASKRV
Sbjct: 961 KIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSALASKRV 1020
Query: 3361 LKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 3540
LKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSA
Sbjct: 1021 LKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 1080
Query: 3541 KNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATE 3720
KNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK VQCALEYTTLRSVTQATE
Sbjct: 1081 KNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATE 1140
Query: 3721 VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA 3900
VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA
Sbjct: 1141 VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA 1200
Query: 3901 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTE 4080
EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTE
Sbjct: 1201 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTE 1259
Query: 4081 MALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSN 4260
MALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVNLLAVM HEDVDA RTTSN
Sbjct: 1260 MALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSN 1319
Query: 4261 HLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN 4440
HLIEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN
Sbjct: 1320 HLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN 1379
Query: 4441 RNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQLAPIGTGDCALLLNEEML 4620
RNDTGPMMRCSFEETVDILLDAAVFAE+D L+GVTENIMLGQLAPIGTG CAL LNEEML
Sbjct: 1380 RNDTGPMMRCSFEETVDILLDAAVFAESDYLKGVTENIMLGQLAPIGTGGCALYLNEEML 1439
Query: 4621 KQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPY 4800
KQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYLLSPN+R+SP+TDAQFSPY
Sbjct: 1440 KQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYLLSPNMRMSPMTDAQFSPY 1499
Query: 4801 VGGMAF 4818
VGGMAF
Sbjct: 1500 VGGMAF 1505
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2850 bits (7389), Expect = 0.0
Identities = 1405/1536 (91%), Positives = 1482/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MD RFP+SPAEV+KVR VQFGILSPD IRQMSVV IEHSETTE+GKPK GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 750
FKQA RIRNPKNRL+K+LDACKNK+KCEGGDEI+VQGQD+ EP+KK RGGCGAQQPK++I
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
+GMKM+AEYK Q+KKNDD EQ+PEPVERKQ LSAE+VLS+LKRI+DEDC LLGLNP+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
+DGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
L+R SAWH E+E GFITPGDTQVRIE+GELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK+++++F+ +++YEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDN+WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDC
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME GLDFGMTP+RSP+ GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPIMGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PY++GMMSP+YLLSPN RLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>gb|OVA15969.1| RNA polymerase II [Macleaya cordata]
Length = 1853
Score = 2848 bits (7383), Expect = 0.0
Identities = 1406/1541 (91%), Positives = 1479/1541 (95%), Gaps = 6/1541 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQPKISI 750
FKQ+ RI+NPK+RL+K+LDACKNK+KCEGGDEIDVQGQD EP+KKSRGGCGAQQPK++I
Sbjct: 121 FKQSQRIKNPKHRLKKVLDACKNKNKCEGGDEIDVQGQDLEEPVKKSRGGCGAQQPKLTI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
+GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDC LLGLNP +AR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLTAERVLSVLKRISDEDCMLLGLNPMFAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSE-----DDLTHQLAMIIRHNENLKRQERNGAP 1095
PDWMILQVL SVMMDTSARSE DDLTHQLAMIIRHNENL+RQERNGAP
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEASFFYDDLTHQLAMIIRHNENLRRQERNGAP 300
Query: 1096 AHIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRV 1275
AHIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRV
Sbjct: 301 AHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRV 360
Query: 1276 DFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGA 1455
DFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGA
Sbjct: 361 DFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA 420
Query: 1456 KYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKI 1635
KYIIR+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKI
Sbjct: 421 KYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKI 480
Query: 1636 MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMG 1815
MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMG
Sbjct: 481 MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMG 540
Query: 1816 IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLII 1995
IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLII
Sbjct: 541 IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLII 600
Query: 1996 PKQINLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEV 2175
PKQINL+R SAWH E+E GFITPGDTQVRIE+GELL+GTLCKK LGTSTGSLIHVIWEEV
Sbjct: 601 PKQINLMRVSAWHSESETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEV 660
Query: 2176 GPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAA 2355
GPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAA
Sbjct: 661 GPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAA 720
Query: 2356 QEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFIN 2535
QEKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFIN
Sbjct: 721 QEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFIN 780
Query: 2536 ISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHA 2715
ISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHA
Sbjct: 781 ISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHA 840
Query: 2716 MGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVW 2895
MGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VW
Sbjct: 841 MGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW 900
Query: 2896 IESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLE 3075
IESQ L+SLK+K+++F+ +++YEIDN NWNP+YMLPE VEDLKTIRE R+VFDAEV+KLE
Sbjct: 901 IESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIREFRNVFDAEVKKLE 960
Query: 3076 ADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQER 3255
DRFQLGTEI TTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQER
Sbjct: 961 GDRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQER 1020
Query: 3256 LKVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQS 3435
LKVV GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQS
Sbjct: 1021 LKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQS 1080
Query: 3436 LVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSL 3615
LVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSL
Sbjct: 1081 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSL 1140
Query: 3616 SVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEM 3795
SVYLKP+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEM
Sbjct: 1141 SVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEM 1200
Query: 3796 PDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLIL 3975
PDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLIL
Sbjct: 1201 PDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLIL 1260
Query: 3976 RIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEN 4155
RIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDEN
Sbjct: 1261 RIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDEN 1320
Query: 4156 DGFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVV 4335
DGFK ENEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVV
Sbjct: 1321 DGFKPENEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVV 1380
Query: 4336 ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVF 4515
ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+
Sbjct: 1381 ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY 1440
Query: 4516 AETDCLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARS 4695
AETD LRGVTENIMLGQLAPIGTG CAL LN++ML+QAIE+ LPSYME GLDFGMTP+RS
Sbjct: 1441 AETDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRS 1499
Query: 4696 PLTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
P+TGTPYH+GMMSP+YLLSPN+R SP++DAQFSPYVGGMAF
Sbjct: 1500 PITGTPYHEGMMSPSYLLSPNVRSSPISDAQFSPYVGGMAF 1540
>ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 2840 bits (7363), Expect = 0.0
Identities = 1397/1536 (90%), Positives = 1475/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 750
FKQA +IRNPKNRL+KILD+CK+K+KCEGGDEI+ Q QD+ EPLKKSRGGCGAQQPKI+I
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQDTDEPLKKSRGGCGAQQPKITI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
+GMKM+AEYK+QKKKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
L+R SAWH + E G ITPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETIS AKN VKELIR+AQ+K L
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
E EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK+K+ +F+ +++YEID+ NWNP+YMLP+ VEDLKTIRE R+VFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEI TTGDN+WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+VS +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+I+EDV+FVKSYYEMPDEEI
Sbjct: 1141 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDEN+GF
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDC+L LNE+MLKQAI+I LPSYM+ GLDFGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMD-GLDFGMTPARSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSPNY+LSPNLRLSP+TDAQFSPYVGGM F
Sbjct: 1500 PYHDGMMSPNYMLSPNLRLSPITDAQFSPYVGGMGF 1535
>ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [Helianthus annuus]
gb|OTG28102.1| putative RNA polymerase II large subunit [Helianthus annuus]
Length = 1824
Score = 2838 bits (7357), Expect = 0.0
Identities = 1408/1537 (91%), Positives = 1468/1537 (95%), Gaps = 2/1537 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MD+RFP+SPAEVAKVRVVQFGILSPDEIRQMSVVHIEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 750
FKQA +IRNPKNRL+KILDACK+K+KC+GGDEID Q QD EP+KKSRGGCGAQQPKI+I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKSKTKCDGGDEIDSQNQDGDEPVKKSRGGCGAQQPKITI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
+GMKMVAEYKLQKKKNDD EQ+PEP ERKQ LSAE+VLS+LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMVAEYKLQKKKNDDTEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
+DGQRLDLRYLKKSSD HLE GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPTPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
L+R SAWH E E G +TPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LIRTSAWHSETETGHLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TME INETIS AKNEVKELIRAAQ+KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADASTMETINETISKAKNEVKELIRAAQDKQL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK+K+ +F+ +YKYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR Q
Sbjct: 901 LDSLKIKKKEFDRLYKYEIDDQNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRVQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERL+VV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
GDD LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSIEAQKNATLFFNILLRSTFASKRVLSEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
PDVSKTK+RAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKDRAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDEN+GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDENEGFKP 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVMCHEDVDA R+TSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDALRSTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDCALLLNE+ML+QAI++ LPSYM+ GLD GMTP RSP+ T
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLQQAIDVQLPSYMD-GLDIGMTPGRSPI--T 1497
Query: 4711 PYHDGMMSP-NYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYHDGMMSP NYLLSPNLRLSP DAQFSPYVGGM F
Sbjct: 1498 PYHDGMMSPTNYLLSPNLRLSPFNDAQFSPYVGGMGF 1534
>gb|PKI74424.1| hypothetical protein CRG98_005188 [Punica granatum]
Length = 1853
Score = 2833 bits (7344), Expect = 0.0
Identities = 1394/1536 (90%), Positives = 1475/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 214 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 393
MDLRFPFSPAEVAKVR+VQFGILSPDEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 394 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 573
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEE+ K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 574 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 750
FKQAMRIRNPKNRL+KILDACKNK+KCEGGDEIDVQGQDSE P+KKSRGGCGAQQPK++I
Sbjct: 121 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPKLTI 180
Query: 751 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 930
+GMKM+AEYK +KK+DDP+Q+PEPVERKQ LSAE+VLS+LKRI+DEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKSPRKKSDDPDQLPEPVERKQTLSAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 931 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1110
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 1111 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1290
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1291 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1470
TVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPEAVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1471 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1650
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1651 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1830
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1831 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2010
LLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2011 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2190
L+R SAWH E E GFITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSELETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2191 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2370
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATME+INETIS AK+EVK LI+ AQEK+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMERINETISKAKDEVKRLIKEAQEKKL 720
Query: 2371 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2550
E EPGRTMMESFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQRSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2551 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2730
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2731 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2910
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2911 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3090
L+SLK+KR++F+ +++YE+D+ NWNP+YMLPE +EDL+TIREIR+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKRSEFDRVFRYELDDDNWNPDYMLPEHIEDLRTIREIRNVFDAEVQKLEADRYQ 960
Query: 3091 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3270
LGTEIATTGDNSWPLPVN+KRL+ NAQKTFK+D RR SDMHPMEIVE VDKLQE+L VV
Sbjct: 961 LGTEIATTGDNSWPLPVNLKRLIWNAQKTFKIDMRRTSDMHPMEIVEYVDKLQEKLLVVP 1020
Query: 3271 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3450
G D LS+EAQKNATLFFNILLRS ASKRVLKEYRLTREAFEW++GEIESRFL SLVA G
Sbjct: 1021 GKDLLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWILGEIESRFLLSLVAPG 1080
Query: 3451 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3630
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3631 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3810
P+V+KTKE AKN+QCALEYTTLRSVTQATEVWYDPDPM T+IEED++FVKSYYEMPDEEI
Sbjct: 1141 PEVNKTKESAKNIQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3811 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3990
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 3991 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4170
ND+APKGE+NDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K+NKF+E+DGFK
Sbjct: 1261 NDDAPKGEMNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFEESDGFKP 1320
Query: 4171 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4350
E EWMLDTEGVNLLAVMCHE VDARRTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDARRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4351 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4530
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 4531 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4710
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYME GLDFGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYME-GLDFGMTPARSPISGT 1499
Query: 4711 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4818
PYH+GMMSP+YLLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1535