BLASTX nr result

ID: Rehmannia30_contig00002969 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00002969
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU14075.1| unknown [Glycine max]                                   72   4e-13

>gb|ACU14075.1| unknown [Glycine max]
          Length = 142

 Score = 72.4 bits (176), Expect = 4e-13
 Identities = 43/78 (55%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
 Frame = +2

Query: 278 KTLTIQFLISLDKFFLKTLSPRAS-----I*LLEASFSFAF*IFKTFLTIFCSSTKKALM 442
           +T  I+F+I  +   L  L    S     I   EA FSFAF IFKTF TIFC STKKA +
Sbjct: 44  RTTLIKFVIYYNHSNLTVLQKDVSHCVFQIQAFEACFSFAFWIFKTFFTIFCPSTKKARI 103

Query: 443 ILSLTAPPDNTPPYGRFT 496
           ILSLTA PD TPPY R T
Sbjct: 104 ILSLTALPDKTPPYARLT 121


Top