BLASTX nr result
ID: Rehmannia30_contig00002794
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00002794
(1216 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PIN16523.1| ATP-dependent RNA helicase [Handroanthus impetigi... 651 0.0
ref|XP_011090766.1| DEAD-box ATP-dependent RNA helicase 58, chlo... 648 0.0
ref|XP_012832471.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 638 0.0
ref|XP_023895752.1| DEAD-box ATP-dependent RNA helicase 58, chlo... 575 0.0
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 574 0.0
emb|CBI26203.3| unnamed protein product, partial [Vitis vinifera] 574 0.0
ref|XP_011090767.1| DEAD-box ATP-dependent RNA helicase 58, chlo... 572 0.0
ref|XP_011021586.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 573 0.0
gb|PON80147.1| DEAD-box ATP-dependent RNA helicase [Parasponia a... 572 0.0
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 571 0.0
ref|XP_024019815.1| DEAD-box ATP-dependent RNA helicase 58, chlo... 571 0.0
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 571 0.0
gb|POO02243.1| DEAD-box ATP-dependent RNA helicase [Trema orient... 571 0.0
ref|XP_017220020.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 566 0.0
ref|XP_016450792.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 566 0.0
ref|XP_016497752.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 566 0.0
ref|XP_009603254.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 566 0.0
ref|XP_019264117.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 565 0.0
ref|XP_009338466.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 561 0.0
ref|XP_018846862.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 561 0.0
>gb|PIN16523.1| ATP-dependent RNA helicase [Handroanthus impetiginosus]
Length = 471
Score = 651 bits (1679), Expect = 0.0
Identities = 330/377 (87%), Positives = 344/377 (91%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ EALPVLFSGRD VI AQTGSGKTLAYLLLIFSVVNA+RSSVQAL+VVPTRELGM
Sbjct: 95 PTPVQREALPVLFSGRDAVIHAQTGSGKTLAYLLLIFSVVNAQRSSVQALIVVPTRELGM 154
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QV KVARMLAAKSLELESEQ+SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML
Sbjct: 155 QVAKVARMLAAKSLELESEQKSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 214
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL LD MRVLVIDEVDF+F+ IN QTIFASASIPQHRRF+
Sbjct: 215 DKQILKLDAMRVLVIDEVDFLFSSSKEVSSLKKLLTTYSSINKHQTIFASASIPQHRRFL 274
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DCIQQKWT+ADVVHVHVNPVEP+PSCLYHRFVICGKRERY+T+LHLL+SDAPQSAIIFV
Sbjct: 275 HDCIQQKWTKADVVHVHVNPVEPLPSCLYHRFVICGKRERYATVLHLLRSDAPQSAIIFV 334
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAPPTTLLIEFLKTSH+ CPELVLLEEDMN NQRAASL D+KQSGGYLL
Sbjct: 335 GEQSEKSKKAGNAPPTTLLIEFLKTSHQRCPELVLLEEDMNINQRAASLIDIKQSGGYLL 394
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFDLPKDA NYLHRAGRT RKPFSDSKCFVTSIITAEERFV
Sbjct: 395 VATDIAARGVDLPETTHIYNFDLPKDAINYLHRAGRTCRKPFSDSKCFVTSIITAEERFV 454
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F CEELFF
Sbjct: 455 LQRFENELLFHCEELFF 471
>ref|XP_011090766.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1
[Sesamum indicum]
Length = 472
Score = 648 bits (1672), Expect = 0.0
Identities = 328/377 (87%), Positives = 342/377 (90%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PTHVQ EALPVLFSGRDCVI AQTGSGKTLAYLLLI+SVVNA+RSSVQAL+VVPTRELGM
Sbjct: 96 PTHVQREALPVLFSGRDCVIHAQTGSGKTLAYLLLIYSVVNAQRSSVQALIVVPTRELGM 155
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK EL+SEQ+SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML
Sbjct: 156 QVTKVARMLAAKYPELDSEQRSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 215
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL LD MRVLVIDEVDFMFN INNRQT+FASASIPQHRRF+
Sbjct: 216 DKQILKLDTMRVLVIDEVDFMFNSSREVSSLRKLLTTYSSINNRQTVFASASIPQHRRFL 275
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ADVVHVHVNPVEPMPSCLYHRFV+C KRER STLLHLLQSDAP+SAIIFV
Sbjct: 276 YDCIQQKWTKADVVHVHVNPVEPMPSCLYHRFVVCDKRERNSTLLHLLQSDAPKSAIIFV 335
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSK+AGNAPPTT L EFLKTS+ C ELVLLEEDMN NQRA SL+DVKQSGGYLL
Sbjct: 336 GEQSEKSKRAGNAPPTTALFEFLKTSYGECLELVLLEEDMNINQRATSLSDVKQSGGYLL 395
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFDLP+DA NYLHRAGRTGRKPFSDSKCFVTSIITAEERFV
Sbjct: 396 VATDIAARGVDLPETTHIYNFDLPRDAINYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 455
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F CEELFF
Sbjct: 456 LQRFENELLFHCEELFF 472
>ref|XP_012832471.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
[Erythranthe guttata]
gb|EYU41518.1| hypothetical protein MIMGU_mgv1a005973mg [Erythranthe guttata]
Length = 463
Score = 638 bits (1646), Expect = 0.0
Identities = 326/377 (86%), Positives = 342/377 (90%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT+VQ+EALPVLFSGRDCVI AQTGSGKTLAYLLLIFSVV A+RS+VQAL+VVPTRELGM
Sbjct: 89 PTNVQNEALPVLFSGRDCVIHAQTGSGKTLAYLLLIFSVVQAQRSAVQALIVVPTRELGM 148
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR+LAAKS +LE Q+S TVMALLDGGTLRRHKSWLKVEPPAIVIATLRSL QML
Sbjct: 149 QVTKVARLLAAKSPDLE--QKSYTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLSQML 206
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DK IL LD MRVLVIDEVDFMFN INNRQTIFASASIPQHRRF+
Sbjct: 207 DKHILKLDTMRVLVIDEVDFMFNSSEEVSSLKKLLTIHSSINNRQTIFASASIPQHRRFV 266
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ADVVHVHVNPV PMPSCLYHRFVICGKRER+STLLHLLQSDAPQSAIIFV
Sbjct: 267 YDCIQQKWTKADVVHVHVNPVNPMPSCLYHRFVICGKRERHSTLLHLLQSDAPQSAIIFV 326
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGN+PPTTLLIEFLKTSH+GC ELVLLEEDMNFNQRAASLTD+KQS GYLL
Sbjct: 327 GEQSEKSKKAGNSPPTTLLIEFLKTSHKGCSELVLLEEDMNFNQRAASLTDIKQSEGYLL 386
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFDLPKDA NYLHRAGRTGRKPFSDSKC+VTSIITAEERF
Sbjct: 387 VATDIAARGVDLPETTHIYNFDLPKDAVNYLHRAGRTGRKPFSDSKCYVTSIITAEERFA 446
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F C+EL F
Sbjct: 447 LQRFENELFFHCQELLF 463
>ref|XP_023895752.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Quercus suber]
gb|POE57038.1| dead-box atp-dependent rna helicase 58, chloroplastic [Quercus suber]
Length = 464
Score = 575 bits (1482), Expect = 0.0
Identities = 277/375 (73%), Positives = 328/375 (87%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT+VQ +ALP+LFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQA++VVPTRELG
Sbjct: 88 PTYVQKQALPLLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSTVQAVIVVPTRELGT 147
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVT+VARMLAA+ +ELE EQ+SCTVMALLDGG L+RHKSWLK EPP IV+AT++SLCQML
Sbjct: 148 QVTRVARMLAARPMELELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATIKSLCQML 207
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K+IL L+ M+VL+IDEVDFMFN ++NRQTIFASASIPQH RF+
Sbjct: 208 EKKILKLESMKVLIIDEVDFMFNSSKEVSSLRKLLTSYSSLHNRQTIFASASIPQHNRFV 267
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DCIQQKWT++DVVHVHVNP++PMPSCL+HRFVICGK +R TLL LL+SDAP+S IIFV
Sbjct: 268 HDCIQQKWTKSDVVHVHVNPIQPMPSCLHHRFVICGKNKRLQTLLSLLRSDAPESGIIFV 327
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAPPTT L++FL+TS+ GC ++ LLEEDMNFN RAASL++V+Q G YLL
Sbjct: 328 GEQSEKSKKAGNAPPTTSLVDFLRTSYVGCSDIHLLEEDMNFNSRAASLSEVRQGGSYLL 387
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VAT IAARGVDLPETTHIYNFDLP+ A +YLHRAGRTGRKPFSD+KC VT+I+T+EERFV
Sbjct: 388 VATYIAARGVDLPETTHIYNFDLPRTAVDYLHRAGRTGRKPFSDNKCTVTNILTSEERFV 447
Query: 1081 LQRFENELQFQCEEL 1125
LQR+ENEL F CEEL
Sbjct: 448 LQRYENELLFNCEEL 462
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X3 [Vitis vinifera]
Length = 482
Score = 574 bits (1480), Expect = 0.0
Identities = 283/376 (75%), Positives = 319/376 (84%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVL SGRDC++ AQTGSGKTL YLLLIFSVVN K S+VQAL+VVPTRELG+
Sbjct: 102 PTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGI 161
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK +E E EQ+SCTVMALLDGG L+RHKSWLK EPP IV+AT+RSLCQML
Sbjct: 162 QVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQML 221
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI L+ MRVLVIDEVDFMFN NNRQT+FASASIPQHRRF+
Sbjct: 222 EKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFL 281
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DCIQQKWT++DVVHVHVNP+EPMPS L+HRFVIC K ER TLL LL SDAP+ IIFV
Sbjct: 282 HDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFV 341
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAP TLLI+FLKTS+ GCP+++LLEEDMNFN RAASL++V+Q GGYLL
Sbjct: 342 GEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLL 401
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
++TDIAARGVDLPETTHIYNFDLP+ +YLHRAGR RKPFSD KC VT+IIT+EERFV
Sbjct: 402 ISTDIAARGVDLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFV 461
Query: 1081 LQRFENELQFQCEELF 1128
LQR+ENEL F CEELF
Sbjct: 462 LQRYENELMFHCEELF 477
>emb|CBI26203.3| unnamed protein product, partial [Vitis vinifera]
Length = 486
Score = 574 bits (1480), Expect = 0.0
Identities = 283/376 (75%), Positives = 319/376 (84%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVL SGRDC++ AQTGSGKTL YLLLIFSVVN K S+VQAL+VVPTRELG+
Sbjct: 106 PTDVQQQALPVLLSGRDCILHAQTGSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGI 165
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK +E E EQ+SCTVMALLDGG L+RHKSWLK EPP IV+AT+RSLCQML
Sbjct: 166 QVTKVARMLAAKPMEPELEQKSCTVMALLDGGMLKRHKSWLKAEPPTIVVATVRSLCQML 225
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQI L+ MRVLVIDEVDFMFN NNRQT+FASASIPQHRRF+
Sbjct: 226 EKQIFKLESMRVLVIDEVDFMFNASKQVGSLRKLLTSYSSTNNRQTVFASASIPQHRRFL 285
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DCIQQKWT++DVVHVHVNP+EPMPS L+HRFVIC K ER TLL LL SDAP+ IIFV
Sbjct: 286 HDCIQQKWTKSDVVHVHVNPIEPMPSSLHHRFVICNKYERRQTLLSLLHSDAPECGIIFV 345
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAP TLLI+FLKTS+ GCP+++LLEEDMNFN RAASL++V+Q GGYLL
Sbjct: 346 GEQSEKSKKAGNAPSATLLIDFLKTSYGGCPDILLLEEDMNFNLRAASLSEVRQRGGYLL 405
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
++TDIAARGVDLPETTHIYNFDLP+ +YLHRAGR RKPFSD KC VT+IIT+EERFV
Sbjct: 406 ISTDIAARGVDLPETTHIYNFDLPRTVVDYLHRAGRAARKPFSDQKCCVTNIITSEERFV 465
Query: 1081 LQRFENELQFQCEELF 1128
LQR+ENEL F CEELF
Sbjct: 466 LQRYENELMFHCEELF 481
>ref|XP_011090767.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X2
[Sesamum indicum]
Length = 454
Score = 572 bits (1475), Expect = 0.0
Identities = 290/337 (86%), Positives = 304/337 (90%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PTHVQ EALPVLFSGRDCVI AQTGSGKTLAYLLLI+SVVNA+RSSVQAL+VVPTRELGM
Sbjct: 96 PTHVQREALPVLFSGRDCVIHAQTGSGKTLAYLLLIYSVVNAQRSSVQALIVVPTRELGM 155
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK EL+SEQ+SCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML
Sbjct: 156 QVTKVARMLAAKYPELDSEQRSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 215
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL LD MRVLVIDEVDFMFN INNRQT+FASASIPQHRRF+
Sbjct: 216 DKQILKLDTMRVLVIDEVDFMFNSSREVSSLRKLLTTYSSINNRQTVFASASIPQHRRFL 275
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ADVVHVHVNPVEPMPSCLYHRFV+C KRER STLLHLLQSDAP+SAIIFV
Sbjct: 276 YDCIQQKWTKADVVHVHVNPVEPMPSCLYHRFVVCDKRERNSTLLHLLQSDAPKSAIIFV 335
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSK+AGNAPPTT L EFLKTS+ C ELVLLEEDMN NQRA SL+DVKQSGGYLL
Sbjct: 336 GEQSEKSKRAGNAPPTTALFEFLKTSYGECLELVLLEEDMNINQRATSLSDVKQSGGYLL 395
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRT 1011
VATDIAARGVDLPETTHIYNFDLP+DA NYLHRAGRT
Sbjct: 396 VATDIAARGVDLPETTHIYNFDLPRDAINYLHRAGRT 432
>ref|XP_011021586.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Populus euphratica]
Length = 477
Score = 573 bits (1477), Expect = 0.0
Identities = 280/376 (74%), Positives = 320/376 (85%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVLFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQ+L+VVPTRELG+
Sbjct: 101 PTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQSLIVVPTRELGI 160
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA E ++EQ+SCTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML
Sbjct: 161 QVTKVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQML 220
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K +L L+ M+VLVIDEVDFMF+ N+RQT+FASASIPQH RF+
Sbjct: 221 EKHLLKLESMQVLVIDEVDFMFSSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFL 280
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ DVVHVHVNP+EPMP+CL HRFVIC K+ER+ TLL LLQSDAP+S IIFV
Sbjct: 281 YDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRFVICSKKERHQTLLSLLQSDAPKSGIIFV 340
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGN PPT L++FLKTS+ GC E++LLEEDMNFN RAASL++V+Q GGYLL
Sbjct: 341 GEQSEKSKKAGNGPPTVDLVDFLKTSYGGCSEILLLEEDMNFNSRAASLSEVRQGGGYLL 400
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPE THIYNFDLP+ A +YLHRAGRTGRKPFSD KC VTSII EERFV
Sbjct: 401 VATDIAARGVDLPEITHIYNFDLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFV 460
Query: 1081 LQRFENELQFQCEELF 1128
LQR+ENEL F C+ELF
Sbjct: 461 LQRYENELMFNCDELF 476
>gb|PON80147.1| DEAD-box ATP-dependent RNA helicase [Parasponia andersonii]
Length = 483
Score = 572 bits (1473), Expect = 0.0
Identities = 280/375 (74%), Positives = 322/375 (85%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSGRDCV+ AQTGSGKTL YLLLIFSV+N++RS+VQAL+VVPTRELG
Sbjct: 107 PTDVQKQALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVINSQRSAVQALIVVPTRELGT 166
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAKS E + EQ+SCTVMALLDGGTLRRHKSWLK EPP IV+AT+ SLCQML
Sbjct: 167 QVTKVARTLAAKSSESDLEQKSCTVMALLDGGTLRRHKSWLKAEPPTIVVATIGSLCQML 226
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K+IL L+ M+VLVIDEVDFMFN INNRQTIFASASIPQHRRF+
Sbjct: 227 EKRILTLESMKVLVIDEVDFMFNSSKEVCSLRKLLTSYSTINNRQTIFASASIPQHRRFV 286
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DC+QQKWT+++V+HVHVNPVEPMPS L+HRFVICGK R TLL LL SDAP S IIFV
Sbjct: 287 HDCVQQKWTKSNVLHVHVNPVEPMPSRLHHRFVICGKNRRQETLLSLLHSDAPDSGIIFV 346
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAPPTTLL++FLK S+ G +++LLEEDMNFN RAASL++++Q GGYLL
Sbjct: 347 GEQSEKSKKAGNAPPTTLLLDFLKASYNGGSDILLLEEDMNFNSRAASLSELRQGGGYLL 406
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
V+TD+AARGVDLPETTHIYNFDLP+ T+YLHRAGRTGRKPFSD +C VT+II +EERFV
Sbjct: 407 VSTDLAARGVDLPETTHIYNFDLPRTVTDYLHRAGRTGRKPFSDERCLVTNIIASEERFV 466
Query: 1081 LQRFENELQFQCEEL 1125
LQR+ENEL F CEEL
Sbjct: 467 LQRYENELMFNCEEL 481
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 571 bits (1471), Expect = 0.0
Identities = 277/375 (73%), Positives = 323/375 (86%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSGRDCV+ AQTGSGKTL YLLLIFSVVN +RS+VQAL+VVPTRELGM
Sbjct: 88 PTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVVNTQRSAVQALIVVPTRELGM 147
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAK +E + EQ+SC+VMALLDGGTLRRHKSWLK EPP +V+AT+ SLCQ L
Sbjct: 148 QVTKVARTLAAKPMESDLEQKSCSVMALLDGGTLRRHKSWLKAEPPTVVVATIGSLCQQL 207
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL L+ MRVLVIDEVDF+FN I+NRQT+FASASIPQHRRF+
Sbjct: 208 DKQILTLESMRVLVIDEVDFIFNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRRFL 267
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
++C+QQKWT+++VVHVHVNP+EPMPSCL+H FVICGK +R TLL LL SDAP S IIFV
Sbjct: 268 HECVQQKWTKSNVVHVHVNPIEPMPSCLHHNFVICGKNKRLQTLLSLLHSDAPHSGIIFV 327
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAPPTT+L++FLK S++G E++LLEEDMN N R ASL++V+Q GGYLL
Sbjct: 328 GEQSEKSKKAGNAPPTTILMDFLKDSYKGGSEILLLEEDMNINSRTASLSEVRQGGGYLL 387
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
V+TD+AARGVDLPETTHIYNFDLP+ AT+YLHRAGRTGRKPFS+ +C VT+IIT+EERFV
Sbjct: 388 VSTDLAARGVDLPETTHIYNFDLPRTATDYLHRAGRTGRKPFSNEECTVTNIITSEERFV 447
Query: 1081 LQRFENELQFQCEEL 1125
LQR+ENEL F CEEL
Sbjct: 448 LQRYENELMFNCEEL 462
>ref|XP_024019815.1| DEAD-box ATP-dependent RNA helicase 58, chloroplastic [Morus
notabilis]
Length = 467
Score = 571 bits (1471), Expect = 0.0
Identities = 277/375 (73%), Positives = 323/375 (86%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSGRDCV+ AQTGSGKTL YLLLIFSVVN +RS+VQAL+VVPTRELGM
Sbjct: 91 PTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVVNTQRSAVQALIVVPTRELGM 150
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAK +E + EQ+SC+VMALLDGGTLRRHKSWLK EPP +V+AT+ SLCQ L
Sbjct: 151 QVTKVARTLAAKPMESDLEQKSCSVMALLDGGTLRRHKSWLKAEPPTVVVATIGSLCQQL 210
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
DKQIL L+ MRVLVIDEVDF+FN I+NRQT+FASASIPQHRRF+
Sbjct: 211 DKQILTLESMRVLVIDEVDFIFNSSKQVSSLRKLLTSYSTISNRQTVFASASIPQHRRFL 270
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
++C+QQKWT+++VVHVHVNP+EPMPSCL+H FVICGK +R TLL LL SDAP S IIFV
Sbjct: 271 HECVQQKWTKSNVVHVHVNPIEPMPSCLHHNFVICGKNKRLQTLLSLLHSDAPHSGIIFV 330
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAPPTT+L++FLK S++G E++LLEEDMN N R ASL++V+Q GGYLL
Sbjct: 331 GEQSEKSKKAGNAPPTTILMDFLKDSYKGGSEILLLEEDMNINSRTASLSEVRQGGGYLL 390
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
V+TD+AARGVDLPETTHIYNFDLP+ AT+YLHRAGRTGRKPFS+ +C VT+IIT+EERFV
Sbjct: 391 VSTDLAARGVDLPETTHIYNFDLPRTATDYLHRAGRTGRKPFSNEECTVTNIITSEERFV 450
Query: 1081 LQRFENELQFQCEEL 1125
LQR+ENEL F CEEL
Sbjct: 451 LQRYENELMFNCEEL 465
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gb|PNT15553.1| hypothetical protein POPTR_010G092200v3 [Populus trichocarpa]
Length = 477
Score = 571 bits (1472), Expect = 0.0
Identities = 280/376 (74%), Positives = 319/376 (84%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALPVLFSGRDC++ AQTGSGKTLAYLLLIFSV+N +RS+VQAL+VVPTRELG+
Sbjct: 101 PTDVQKQALPVLFSGRDCILHAQTGSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGI 160
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAA E ++EQ+SCTVMALLDGG LRRHKSWLK EPP IV+AT+ SLCQML
Sbjct: 161 QVTKVARMLAATPTENDAEQKSCTVMALLDGGMLRRHKSWLKAEPPTIVVATIASLCQML 220
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K +L L+ M+VLVIDEVDFMFN N+RQT+FASASIPQH RF+
Sbjct: 221 EKHLLKLESMQVLVIDEVDFMFNSSKQVSSLRKLLTSYSSCNSRQTVFASASIPQHNRFL 280
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ DVVHVHVNP+EPMP+CL HRFVIC K++R+ TLL LLQSDAP+S IIFV
Sbjct: 281 YDCIQQKWTKRDVVHVHVNPIEPMPTCLQHRFVICSKKQRHQTLLSLLQSDAPKSGIIFV 340
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGN PPT L++FLKTS+ C E++LLEEDMNFN RAASL++V+Q GGYLL
Sbjct: 341 GEQSEKSKKAGNGPPTIDLVDFLKTSYGDCSEILLLEEDMNFNSRAASLSEVRQGGGYLL 400
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPE THIYNF+LP+ A +YLHRAGRTGRKPFSD KC VTSII EERFV
Sbjct: 401 VATDIAARGVDLPEITHIYNFNLPRTAVDYLHRAGRTGRKPFSDEKCNVTSIIMPEERFV 460
Query: 1081 LQRFENELQFQCEELF 1128
LQR+ENEL F CEELF
Sbjct: 461 LQRYENELMFNCEELF 476
>gb|POO02243.1| DEAD-box ATP-dependent RNA helicase [Trema orientalis]
Length = 485
Score = 571 bits (1471), Expect = 0.0
Identities = 279/375 (74%), Positives = 321/375 (85%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSGRDCV+ AQTGSGKTL YLLLIFSV+N++RS+VQAL+VVPTRELG
Sbjct: 109 PTDVQRQALPILFSGRDCVLHAQTGSGKTLTYLLLIFSVINSQRSAVQALIVVPTRELGT 168
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAKS E + EQ+SCTVMALLDGGTLRRHKSWLK EPP IV+AT+ SLCQML
Sbjct: 169 QVTKVARTLAAKSSESDLEQKSCTVMALLDGGTLRRHKSWLKAEPPTIVVATIGSLCQML 228
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K+IL L+ M+VLVIDEVDFMFN INNRQTIFASASIPQHRRF+
Sbjct: 229 EKRILTLESMKVLVIDEVDFMFNSSKEVSSLRKLLTSYSTINNRQTIFASASIPQHRRFV 288
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DC+QQKWT+++V+HVHVNPVEPMPS L+HRFVICGK R TLL LL SDAP S IIFV
Sbjct: 289 HDCVQQKWTKSNVIHVHVNPVEPMPSRLHHRFVICGKNRRQETLLSLLHSDAPDSGIIFV 348
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
G+QSEKSKKAGNAPPTTLL++FLK S+ G +++LLEEDMNFN RAASL +++Q GGYLL
Sbjct: 349 GDQSEKSKKAGNAPPTTLLLDFLKASYNGGSDILLLEEDMNFNSRAASLLELRQGGGYLL 408
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
V+TD+AARGVDLPETTHIYNFDLP+ T+YLHRAGRTGRKPFSD +C VT+II +EERFV
Sbjct: 409 VSTDLAARGVDLPETTHIYNFDLPRTVTDYLHRAGRTGRKPFSDERCLVTNIIASEERFV 468
Query: 1081 LQRFENELQFQCEEL 1125
LQR+ENEL F CEEL
Sbjct: 469 LQRYENELMFNCEEL 483
>ref|XP_017220020.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Daucus carota subsp. sativus]
ref|XP_017220021.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X2 [Daucus carota subsp. sativus]
Length = 472
Score = 566 bits (1459), Expect = 0.0
Identities = 280/376 (74%), Positives = 324/376 (86%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSGRDC++ +QTGSGKTLAYLLLIFSV++ +RS+VQAL++VPTRELGM
Sbjct: 97 PTDVQEQALPILFSGRDCILHSQTGSGKTLAYLLLIFSVLSTRRSTVQALIIVPTRELGM 156
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAKS E +E++ CTVMALLDGGTLRRHKSWLK EPP IV+AT+ SL QML
Sbjct: 157 QVTKVARTLAAKSGEPGTEEKPCTVMALLDGGTLRRHKSWLKAEPPTIVVATMGSLSQML 216
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL L+ +RVLVIDEVDFMFN N RQTIFASAS+PQH RF+
Sbjct: 217 NKNILKLESIRVLVIDEVDFMFNSSKQISAVRKLLNMYSA-NIRQTIFASASVPQHNRFV 275
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ADV HVHVNP+EPMPS L+HRFVICGK ER++TLL L+QSDAPQSAIIFV
Sbjct: 276 YDCIQQKWTKADVAHVHVNPIEPMPSRLHHRFVICGKNERHATLLSLVQSDAPQSAIIFV 335
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAPP T LI+ LK+S GC E++LL+ED+NFN RA SL++++Q GGYLL
Sbjct: 336 GEQSEKSKKAGNAPPITTLIDLLKSSPAGCSEILLLDEDVNFNSRAVSLSEMRQGGGYLL 395
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFDLPKDA +YLHRAGRTGRKPFSD+KC VTSI+T+EE+FV
Sbjct: 396 VATDIAARGVDLPETTHIYNFDLPKDAVSYLHRAGRTGRKPFSDNKCVVTSILTSEEQFV 455
Query: 1081 LQRFENELQFQCEELF 1128
L+R+ENEL FQCEELF
Sbjct: 456 LRRYENELMFQCEELF 471
>ref|XP_016450792.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Nicotiana tabacum]
Length = 466
Score = 566 bits (1458), Expect = 0.0
Identities = 282/377 (74%), Positives = 316/377 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP L+SGRDCV+ AQTGSGKTLAYLL I SV++++RS+VQAL+VVPTRELGM
Sbjct: 90 PTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGM 149
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ELES +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 150 QVTKVARMLAAKPSELESGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQML 209
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 210 EKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFL 269
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRFV+C KRE+ LL LLQ D+P+SAIIFV
Sbjct: 270 YDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFV 329
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
EQSEKSKKAGNAPP TLL++FL +S G + LLEEDMNFN+RAASL++++ GGYLL
Sbjct: 330 SEQSEKSKKAGNAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLL 389
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFD+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFV
Sbjct: 390 VATDIAARGVDLPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFV 449
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F CE+LFF
Sbjct: 450 LQRFENELMFCCEQLFF 466
>ref|XP_016497752.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic-like
[Nicotiana tabacum]
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gb|AAG34876.1|AF261021_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
Length = 466
Score = 566 bits (1458), Expect = 0.0
Identities = 282/377 (74%), Positives = 316/377 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP L+SGRDCV+ AQTGSGKTLAYLL I SV++++RS+VQAL+VVPTRELGM
Sbjct: 90 PTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGM 149
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ELES +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 150 QVTKVARMLAAKPSELESGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQML 209
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 210 EKHILKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSTSKNRQTIFASASIPQHRRFL 269
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRFV+C KRE+ LL LLQ D+P+SAIIFV
Sbjct: 270 YDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFV 329
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
EQSEKSKKAGNAPP TLL++FL +S G + LLEEDMNFN+RAASL++++ GGYLL
Sbjct: 330 SEQSEKSKKAGNAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLL 389
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFD+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFV
Sbjct: 390 VATDIAARGVDLPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFV 449
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F CE+LFF
Sbjct: 450 LQRFENELMFCCEQLFF 466
>ref|XP_009603254.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Nicotiana tomentosiformis]
Length = 489
Score = 566 bits (1459), Expect = 0.0
Identities = 283/377 (75%), Positives = 317/377 (84%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP L+SGRDCV+ AQTGSGKTLAYLL I SV++++RS+VQAL+VVPTRELGM
Sbjct: 113 PTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGM 172
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK ELES +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLC+ML
Sbjct: 173 QVTKVARMLAAKPSELESGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCRML 232
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K IL LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 233 EKHILKLDSCQVLVVDEVDFMFNSSKEISSLKSLLTSYSSSKNRQTIFASASIPQHRRFL 292
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDCIQQKWT+ADVVHVHVN VEPMPSCL+HRFV+C KRE+ LL LLQ D+P+SAIIFV
Sbjct: 293 YDCIQQKWTKADVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFV 352
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
EQSEKSKKAGNAPP TLL++FL +S G + LLEEDMNFN+RAASL++++ GGYLL
Sbjct: 353 SEQSEKSKKAGNAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLL 412
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFD+PKDA NYLHRAGRTGRKPFSD KCFVTSIITAEERFV
Sbjct: 413 VATDIAARGVDLPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITAEERFV 472
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F CE+LFF
Sbjct: 473 LQRFENELMFCCEQLFF 489
>ref|XP_019264117.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
[Nicotiana attenuata]
gb|OIT36665.1| dead-box atp-dependent rna helicase 58, chloroplastic [Nicotiana
attenuata]
Length = 466
Score = 565 bits (1455), Expect = 0.0
Identities = 280/377 (74%), Positives = 316/377 (83%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP L+SGRDCV+ AQTGSGKTLAYLL I SV++++RS+VQAL+VVPTRELGM
Sbjct: 90 PTEVQLQALPFLYSGRDCVLHAQTGSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGM 149
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVAR LAAK ELES +SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 150 QVTKVARTLAAKPSELESGPKSCTVMALLDGGMLNRHKSWLKAEPPTIVVATMGSLCQML 209
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+K +L LD +VLV+DEVDFMFN NRQTIFASASIPQHRRF+
Sbjct: 210 EKHVLKLDSCQVLVVDEVDFMFNSSKEISSLKRLLTSYSSSKNRQTIFASASIPQHRRFL 269
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
YDC+QQKWT+ADVVHVHVN VEPMPSCL+HRFV+C KRE+ LL LLQ D+P+SAIIFV
Sbjct: 270 YDCVQQKWTKADVVHVHVNSVEPMPSCLHHRFVVCTKREKNQVLLSLLQVDSPESAIIFV 329
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
EQSEKSKKAGNAPP TLL++FL +S G + LLEEDMNFN+RAASL++++ GGYLL
Sbjct: 330 SEQSEKSKKAGNAPPITLLVDFLMSSSGGFSNVSLLEEDMNFNKRAASLSELRGGGGYLL 389
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFD+PKDA NYLHRAGRTGRKPFSD KCFVTSIIT EERFV
Sbjct: 390 VATDIAARGVDLPETTHIYNFDIPKDAVNYLHRAGRTGRKPFSDKKCFVTSIITVEERFV 449
Query: 1081 LQRFENELQFQCEELFF 1131
LQRFENEL F+CE+LFF
Sbjct: 450 LQRFENELMFRCEQLFF 466
>ref|XP_009338466.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Pyrus x bretschneideri]
Length = 471
Score = 561 bits (1447), Expect = 0.0
Identities = 280/375 (74%), Positives = 317/375 (84%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP LFSGRDC++ AQTGSGKTL YLLLIFS VN +RS+VQALVVVPTRELGM
Sbjct: 96 PTPVQRQALPTLFSGRDCILHAQTGSGKTLTYLLLIFSAVNTRRSAVQALVVVPTRELGM 155
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK E E EQ+SCTVMALLDGG L RHKSWLK EPP IV+AT+ SLCQML
Sbjct: 156 QVTKVARMLAAKPKEGEVEQKSCTVMALLDGGMLTRHKSWLKAEPPTIVVATIGSLCQML 215
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQ++ L+ MRVLVIDEVDFMF+ IN RQT+FASASIPQHRRF+
Sbjct: 216 EKQMIKLESMRVLVIDEVDFMFSSKQVASLRKLLTSYTS-INTRQTVFASASIPQHRRFL 274
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DCIQQKWT++D +HVHVNPV+PMPSCL HRFVIC K R TLL LLQSDAPQSAIIFV
Sbjct: 275 HDCIQQKWTKSDAIHVHVNPVQPMPSCLQHRFVICRKNRRNGTLLSLLQSDAPQSAIIFV 334
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGNAP TT+LI+FLK S+EG +++LLEEDMNFN RAASL++V+Q G YLL
Sbjct: 335 GEQSEKSKKAGNAPSTTVLIDFLKASYEGYSDILLLEEDMNFNSRAASLSEVRQGGSYLL 394
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
V+TDIAARGVDLP+TTHIYNFDLP+ A +YLHRAGRTGRKPFSD KC VT+II +EERFV
Sbjct: 395 VSTDIAARGVDLPDTTHIYNFDLPRTAVDYLHRAGRTGRKPFSDKKCSVTNIIMSEERFV 454
Query: 1081 LQRFENELQFQCEEL 1125
LQ++ENEL F CEEL
Sbjct: 455 LQKYENELMFNCEEL 469
>ref|XP_018846862.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
isoform X1 [Juglans regia]
Length = 464
Score = 561 bits (1445), Expect = 0.0
Identities = 272/375 (72%), Positives = 319/375 (85%)
Frame = +1
Query: 1 PTHVQHEALPVLFSGRDCVIQAQTGSGKTLAYLLLIFSVVNAKRSSVQALVVVPTRELGM 180
PT VQ +ALP+LFSG DC++ AQTGSGKTLAYLLLIFSV+N ++S+VQA++VVPTRELGM
Sbjct: 88 PTDVQLQALPILFSGCDCILHAQTGSGKTLAYLLLIFSVINTQKSAVQAVIVVPTRELGM 147
Query: 181 QVTKVARMLAAKSLELESEQQSCTVMALLDGGTLRRHKSWLKVEPPAIVIATLRSLCQML 360
QVTKVARMLAAK +ELE EQ+ CTVMALLDGG LRRH SWLK EPP IV+AT+RSLCQML
Sbjct: 148 QVTKVARMLAAKHVELELEQKCCTVMALLDGGMLRRHNSWLKAEPPTIVVATIRSLCQML 207
Query: 361 DKQILNLDRMRVLVIDEVDFMFNXXXXXXXXXXXXXXXXXINNRQTIFASASIPQHRRFM 540
+KQ L L+ MRVL+IDEVDFMFN +NNRQT+FASASIPQHRRF+
Sbjct: 208 EKQTLKLESMRVLIIDEVDFMFNSSKEVGSLRKLLTSYSSLNNRQTVFASASIPQHRRFL 267
Query: 541 YDCIQQKWTQADVVHVHVNPVEPMPSCLYHRFVICGKRERYSTLLHLLQSDAPQSAIIFV 720
+DCIQQKWT++DV+HVH NP++PMPSCLYHRFVI GK ++ LL LL SDAP+S+IIFV
Sbjct: 268 HDCIQQKWTKSDVIHVHANPIQPMPSCLYHRFVIYGKNRKHQILLSLLLSDAPESSIIFV 327
Query: 721 GEQSEKSKKAGNAPPTTLLIEFLKTSHEGCPELVLLEEDMNFNQRAASLTDVKQSGGYLL 900
GEQSEKSKKAGN P TTLL+EFLK S+ GC ++ LLEED NF+ RAASL++V+Q G Y+L
Sbjct: 328 GEQSEKSKKAGNTPSTTLLVEFLKASYVGCSDIHLLEEDTNFHLRAASLSEVRQGGNYIL 387
Query: 901 VATDIAARGVDLPETTHIYNFDLPKDATNYLHRAGRTGRKPFSDSKCFVTSIITAEERFV 1080
VATDIAARGVDLPETTHIYNFDLP+ A +YLHRAGRTGRKPFS++KC VTSI+ +EERFV
Sbjct: 388 VATDIAARGVDLPETTHIYNFDLPRTAVDYLHRAGRTGRKPFSENKCTVTSILLSEERFV 447
Query: 1081 LQRFENELQFQCEEL 1125
L+R+ENEL F CEEL
Sbjct: 448 LKRYENELLFNCEEL 462