BLASTX nr result

ID: Rehmannia30_contig00001929 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00001929
         (503 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIM99621.1| DNA helicase [Handroanthus impetiginosus]              149   2e-38
ref|XP_012839963.1| PREDICTED: ATP-dependent DNA helicase SRS2-l...   107   1e-23
ref|XP_022867584.1| ATP-dependent DNA helicase SRS2-like protein...    65   6e-09
ref|XP_022867525.1| ATP-dependent DNA helicase SRS2-like protein...    65   6e-09
ref|XP_022867464.1| ATP-dependent DNA helicase SRS2-like protein...    65   6e-09

>gb|PIM99621.1| DNA helicase [Handroanthus impetiginosus]
          Length = 1182

 Score =  149 bits (375), Expect = 2e-38
 Identities = 90/153 (58%), Positives = 102/153 (66%), Gaps = 3/153 (1%)
 Frame = -1

Query: 455 MSNKENAVVMPTGGELSAEQRARISQXXXXXXXXXXXXXXXFESETASNHALSNRK---S 285
           M+ KEN VVMPTGGELSAEQRARISQ                ES  AS++ LSN+K   S
Sbjct: 1   MNKKENVVVMPTGGELSAEQRARISQSFRAAKALLARKRPRLESGIASDNLLSNQKGCRS 60

Query: 284 GDEKETNGIKRLPLSEIFTNISNPVSLKDCKLSKTNGDDAKNGVKNEILVTPVRQXXXXX 105
           GDE     IKRLPLSE+ TNIS+PVSLK CKLS+ N DDAKNGV+NEIL+TPVRQ     
Sbjct: 61  GDE-----IKRLPLSEVCTNISSPVSLKGCKLSRQNSDDAKNGVENEILITPVRQAESCS 115

Query: 104 XXXXXXXXSYENKLITEGFGMQKVGLSLENRSI 6
                   S EN+L  EGFG+QKV LSLE+ SI
Sbjct: 116 RPCLGDASSCENELKDEGFGVQKVCLSLEDGSI 148


>ref|XP_012839963.1| PREDICTED: ATP-dependent DNA helicase SRS2-like protein At4g25120
           [Erythranthe guttata]
 gb|EYU35164.1| hypothetical protein MIMGU_mgv1a000422mg [Erythranthe guttata]
          Length = 1162

 Score =  107 bits (266), Expect = 1e-23
 Identities = 74/158 (46%), Positives = 91/158 (57%), Gaps = 8/158 (5%)
 Frame = -1

Query: 455 MSNKENAVVMPTGGELSAEQRARISQXXXXXXXXXXXXXXXFESETASNHALSNRK--SG 282
           MSNKENAVV P GGELSAEQ+ARISQ                 S  A+   L+ ++  SG
Sbjct: 1   MSNKENAVVTPAGGELSAEQKARISQ-----------------SFRAAKALLARKRPRSG 43

Query: 281 DEKE------TNGIKRLPLSEIFTNISNPVSLKDCKLSKTNGDDAKNGVKNEILVTPVRQ 120
           +E E       +GIKRLPLS I TN  + V+LKD KLS  N DD KNGVK+EIL TPV+Q
Sbjct: 44  NENEIDSLNRVDGIKRLPLSHICTNTPSIVNLKDRKLSGRNCDDVKNGVKSEILTTPVKQ 103

Query: 119 XXXXXXXXXXXXXSYENKLITEGFGMQKVGLSLENRSI 6
                           N+L  EG G+++VGLS ++ SI
Sbjct: 104 GEFSNTRYLGDTR--SNELNCEGLGVEEVGLSSKDGSI 139


>ref|XP_022867584.1| ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X3
           [Olea europaea var. sylvestris]
          Length = 967

 Score = 64.7 bits (156), Expect = 6e-09
 Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
 Frame = -1

Query: 449 NKENAVVMPTGGELSAEQRARISQXXXXXXXXXXXXXXXFESETASNHALSNRKSGD--- 279
           NKEN V  P GGELSAEQRARISQ                 S + S+    N+K+ D   
Sbjct: 2   NKENVVASPGGGELSAEQRARISQKFRAAKALLHSKRPRLWSTSPSDLFPKNQKANDTDG 61

Query: 278 ---EKETNGIKRLPLSEIFTNISNPVSLKDCKLSKTN---GDDAKNGVKNEIL 138
              +   NGIKR+PL+EI  N  +P+ +   KL   +    DD  +  K+E+L
Sbjct: 62  IRNQAHINGIKRVPLNEIPKNTPSPIPMNGYKLVNKHCEINDDMNSKTKSEVL 114


>ref|XP_022867525.1| ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X2
           [Olea europaea var. sylvestris]
          Length = 1200

 Score = 64.7 bits (156), Expect = 6e-09
 Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
 Frame = -1

Query: 449 NKENAVVMPTGGELSAEQRARISQXXXXXXXXXXXXXXXFESETASNHALSNRKSGD--- 279
           NKEN V  P GGELSAEQRARISQ                 S + S+    N+K+ D   
Sbjct: 2   NKENVVASPGGGELSAEQRARISQKFRAAKALLHSKRPRLWSTSPSDLFPKNQKANDTDG 61

Query: 278 ---EKETNGIKRLPLSEIFTNISNPVSLKDCKLSKTN---GDDAKNGVKNEIL 138
              +   NGIKR+PL+EI  N  +P+ +   KL   +    DD  +  K+E+L
Sbjct: 62  IRNQAHINGIKRVPLNEIPKNTPSPIPMNGYKLVNKHCEINDDMNSKTKSEVL 114


>ref|XP_022867464.1| ATP-dependent DNA helicase SRS2-like protein At4g25120 isoform X1
           [Olea europaea var. sylvestris]
          Length = 1207

 Score = 64.7 bits (156), Expect = 6e-09
 Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 9/113 (7%)
 Frame = -1

Query: 449 NKENAVVMPTGGELSAEQRARISQXXXXXXXXXXXXXXXFESETASNHALSNRKSGD--- 279
           NKEN V  P GGELSAEQRARISQ                 S + S+    N+K+ D   
Sbjct: 2   NKENVVASPGGGELSAEQRARISQKFRAAKALLHSKRPRLWSTSPSDLFPKNQKANDTDG 61

Query: 278 ---EKETNGIKRLPLSEIFTNISNPVSLKDCKLSKTN---GDDAKNGVKNEIL 138
              +   NGIKR+PL+EI  N  +P+ +   KL   +    DD  +  K+E+L
Sbjct: 62  IRNQAHINGIKRVPLNEIPKNTPSPIPMNGYKLVNKHCEINDDMNSKTKSEVL 114


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