BLASTX nr result
ID: Rehmannia30_contig00001731
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00001731
(410 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087782.1| mRNA turnover protein 4 homolog [Sesamum ind... 92 2e-20
ref|XP_022895584.1| mRNA turnover protein 4 homolog [Olea europa... 90 2e-19
ref|XP_012828399.1| PREDICTED: mRNA turnover protein 4 homolog [... 89 3e-19
ref|XP_017244498.1| PREDICTED: mRNA turnover protein 4 homolog [... 89 5e-19
gb|KDO41508.1| hypothetical protein CISIN_1g035720mg [Citrus sin... 89 5e-19
ref|XP_006491880.1| PREDICTED: mRNA turnover protein 4 homolog [... 89 7e-19
ref|XP_006431946.1| mRNA turnover protein 4 homolog [Citrus clem... 89 7e-19
emb|CDO97523.1| unnamed protein product [Coffea canephora] 87 2e-18
gb|KVI10984.1| Ribosomal protein L10/acidic P0 [Cynara carduncul... 88 3e-18
ref|XP_011040546.1| PREDICTED: mRNA turnover protein 4 homolog [... 86 7e-18
ref|XP_002317075.1| acidic ribosomal protein P0 [Populus trichoc... 86 7e-18
ref|XP_011005319.1| PREDICTED: mRNA turnover protein 4 homolog [... 85 1e-17
ref|XP_018718231.1| PREDICTED: mRNA turnover protein 4 homolog [... 85 1e-17
ref|XP_023739710.1| mRNA turnover protein 4 homolog [Lactuca sat... 85 2e-17
ref|XP_020242075.1| mRNA turnover protein 4 homolog [Asparagus o... 85 2e-17
ref|XP_019173580.1| PREDICTED: mRNA turnover protein 4 homolog [... 85 2e-17
gb|PNT60235.1| hypothetical protein POPTR_001G460100v3 [Populus ... 83 2e-17
gb|OMO92069.1| putative mRNA turnover protein 4 mrt4 [Corchorus ... 80 3e-17
ref|XP_022726455.1| mRNA turnover protein 4 homolog [Durio zibet... 84 3e-17
ref|XP_022762903.1| mRNA turnover protein 4 homolog [Durio zibet... 84 3e-17
>ref|XP_011087782.1| mRNA turnover protein 4 homolog [Sesamum indicum]
Length = 229
Score = 92.4 bits (228), Expect = 2e-20
Identities = 42/46 (91%), Positives = 46/46 (100%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATFKLHLICRWSSEDFEVY+EGLEDSD+E
Sbjct: 182 PLSPESARILRLLGIKMATFKLHLICRWSSEDFEVYKEGLEDSDVE 227
>ref|XP_022895584.1| mRNA turnover protein 4 homolog [Olea europaea var. sylvestris]
Length = 229
Score = 90.1 bits (222), Expect = 2e-19
Identities = 40/46 (86%), Positives = 45/46 (97%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPE++RILRLLGIKMATFKLHL CRWSSEDFE+YREGLEDSD+E
Sbjct: 182 PLSPEAARILRLLGIKMATFKLHLTCRWSSEDFEIYREGLEDSDVE 227
>ref|XP_012828399.1| PREDICTED: mRNA turnover protein 4 homolog [Erythranthe guttata]
gb|EYU18540.1| hypothetical protein MIMGU_mgv1a013146mg [Erythranthe guttata]
Length = 229
Score = 89.4 bits (220), Expect = 3e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +3
Query: 6 ISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
+SPES+RILRLLGIKMATFKLHLICRWS EDFEVYREGLEDSDIE
Sbjct: 183 LSPESARILRLLGIKMATFKLHLICRWSPEDFEVYREGLEDSDIE 227
>ref|XP_017244498.1| PREDICTED: mRNA turnover protein 4 homolog [Daucus carota subsp.
sativus]
gb|KZM98643.1| hypothetical protein DCAR_013995 [Daucus carota subsp. sativus]
Length = 229
Score = 89.0 bits (219), Expect = 5e-19
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
PISPE+SRILRLLGIKMATFKLHLICRWS EDFEVY+EGLE SDIE
Sbjct: 182 PISPEASRILRLLGIKMATFKLHLICRWSPEDFEVYKEGLEGSDIE 227
>gb|KDO41508.1| hypothetical protein CISIN_1g035720mg [Citrus sinensis]
Length = 217
Score = 88.6 bits (218), Expect = 5e-19
Identities = 39/46 (84%), Positives = 46/46 (100%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATFKLHLICRWS+EDFE+YREGL++SD+E
Sbjct: 170 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 215
>ref|XP_006491880.1| PREDICTED: mRNA turnover protein 4 homolog [Citrus sinensis]
Length = 228
Score = 88.6 bits (218), Expect = 7e-19
Identities = 39/46 (84%), Positives = 46/46 (100%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATFKLHLICRWS+EDFE+YREGL++SD+E
Sbjct: 181 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 226
>ref|XP_006431946.1| mRNA turnover protein 4 homolog [Citrus clementina]
gb|ESR45186.1| hypothetical protein CICLE_v10002376mg [Citrus clementina]
dbj|GAY53628.1| hypothetical protein CUMW_150580 [Citrus unshiu]
Length = 228
Score = 88.6 bits (218), Expect = 7e-19
Identities = 39/46 (84%), Positives = 46/46 (100%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATFKLHLICRWS+EDFE+YREGL++SD+E
Sbjct: 181 PLSPESARILRLLGIKMATFKLHLICRWSAEDFELYREGLDESDVE 226
>emb|CDO97523.1| unnamed protein product [Coffea canephora]
Length = 229
Score = 87.4 bits (215), Expect = 2e-18
Identities = 39/46 (84%), Positives = 45/46 (97%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATF+LHL CRWSSE+FEVY+EGLEDSD+E
Sbjct: 182 PLSPESARILRLLGIKMATFRLHLTCRWSSEEFEVYQEGLEDSDVE 227
>gb|KVI10984.1| Ribosomal protein L10/acidic P0 [Cynara cardunculus var. scolymus]
Length = 267
Score = 87.8 bits (216), Expect = 3e-18
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
PISPESSRILRL+G+KMATFKLHLICRWS EDFEVY+EGLE SDIE
Sbjct: 220 PISPESSRILRLMGMKMATFKLHLICRWSPEDFEVYQEGLEGSDIE 265
>ref|XP_011040546.1| PREDICTED: mRNA turnover protein 4 homolog [Populus euphratica]
Length = 229
Score = 85.9 bits (211), Expect = 7e-18
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPESSRILRLLG KMATF+LHLICRWS EDFE+YREGL++SD+E
Sbjct: 182 PLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVE 227
>ref|XP_002317075.1| acidic ribosomal protein P0 [Populus trichocarpa]
gb|PNT13694.1| hypothetical protein POPTR_011G156300v3 [Populus trichocarpa]
Length = 229
Score = 85.9 bits (211), Expect = 7e-18
Identities = 38/46 (82%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPESSRILRLLG KMATF+LHLICRWS EDFE+YREGL++SD+E
Sbjct: 182 PLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVE 227
>ref|XP_011005319.1| PREDICTED: mRNA turnover protein 4 homolog [Populus euphratica]
Length = 229
Score = 85.1 bits (209), Expect = 1e-17
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLG K ATFKLHLICRWS EDFE+YREGL+DSD+E
Sbjct: 182 PLSPESARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVE 227
>ref|XP_018718231.1| PREDICTED: mRNA turnover protein 4 homolog [Eucalyptus grandis]
gb|KCW57052.1| hypothetical protein EUGRSUZ_I02710 [Eucalyptus grandis]
Length = 229
Score = 85.1 bits (209), Expect = 1e-17
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATF+LHLICRWS EDFE+Y EG++DSD+E
Sbjct: 182 PLSPESARILRLLGIKMATFRLHLICRWSPEDFELYAEGMDDSDVE 227
>ref|XP_023739710.1| mRNA turnover protein 4 homolog [Lactuca sativa]
gb|PLY69280.1| hypothetical protein LSAT_7X77981 [Lactuca sativa]
Length = 229
Score = 84.7 bits (208), Expect = 2e-17
Identities = 40/46 (86%), Positives = 42/46 (91%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
PISPESSRILRL+G+KMATFKL LICRWS EDFEVY EGLE SDIE
Sbjct: 182 PISPESSRILRLMGVKMATFKLKLICRWSPEDFEVYEEGLEGSDIE 227
>ref|XP_020242075.1| mRNA turnover protein 4 homolog [Asparagus officinalis]
gb|ONK61830.1| uncharacterized protein A4U43_C08F34030 [Asparagus officinalis]
Length = 229
Score = 84.7 bits (208), Expect = 2e-17
Identities = 39/46 (84%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
PISPE+SRILRLLGIKMATFKLHL+CRWS +DFEV+REGL+ SDIE
Sbjct: 182 PISPEASRILRLLGIKMATFKLHLVCRWSPDDFEVFREGLDLSDIE 227
>ref|XP_019173580.1| PREDICTED: mRNA turnover protein 4 homolog [Ipomoea nil]
Length = 229
Score = 84.7 bits (208), Expect = 2e-17
Identities = 37/46 (80%), Positives = 43/46 (93%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPE++RILR+LGIKMATFKLHLICRW E FE+YREGLEDSD+E
Sbjct: 182 PLSPEAARILRMLGIKMATFKLHLICRWGPEQFELYREGLEDSDVE 227
>gb|PNT60235.1| hypothetical protein POPTR_001G460100v3 [Populus trichocarpa]
Length = 168
Score = 83.2 bits (204), Expect = 2e-17
Identities = 37/46 (80%), Positives = 42/46 (91%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPE +RILRLLG K ATFKLHLICRWS EDFE+YREGL+DSD+E
Sbjct: 121 PLSPECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVE 166
>gb|OMO92069.1| putative mRNA turnover protein 4 mrt4 [Corchorus olitorius]
Length = 80
Score = 80.5 bits (197), Expect = 3e-17
Identities = 35/46 (76%), Positives = 43/46 (93%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATF+L LICRWS EDFE+Y+E L+DSD++
Sbjct: 33 PLSPESARILRLLGIKMATFRLQLICRWSPEDFELYKEALDDSDVD 78
>ref|XP_022726455.1| mRNA turnover protein 4 homolog [Durio zibethinus]
Length = 229
Score = 84.3 bits (207), Expect = 3e-17
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATF+LHLICRWS EDFE+YRE L++SD+E
Sbjct: 182 PLSPESARILRLLGIKMATFRLHLICRWSPEDFELYREALDESDVE 227
>ref|XP_022762903.1| mRNA turnover protein 4 homolog [Durio zibethinus]
Length = 229
Score = 84.3 bits (207), Expect = 3e-17
Identities = 37/46 (80%), Positives = 44/46 (95%)
Frame = +3
Query: 3 PISPESSRILRLLGIKMATFKLHLICRWSSEDFEVYREGLEDSDIE 140
P+SPES+RILRLLGIKMATF+LHLICRWS EDFE+Y+E LE+SD+E
Sbjct: 182 PLSPESARILRLLGIKMATFRLHLICRWSPEDFELYKEALEESDVE 227