BLASTX nr result

ID: Rehmannia30_contig00001367 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00001367
         (521 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011092271.1| pentatricopeptide repeat-containing protein ...    77   5e-13
gb|PIN18719.1| hypothetical protein CDL12_08611 [Handroanthus im...    63   3e-08

>ref|XP_011092271.1| pentatricopeptide repeat-containing protein At1g10270, partial
           [Sesamum indicum]
          Length = 793

 Score = 76.6 bits (187), Expect = 5e-13
 Identities = 43/95 (45%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
 Frame = +1

Query: 4   EIENILNRFSSXXXXXXXXXXXXXXXXXXXXXX------------WQTSSSHQTSYANQF 147
           EIENILNRF S                                  WQTSS  Q S+ NQF
Sbjct: 699 EIENILNRFPSPFPPQRPFLGPRGPPRVMRPPEMVEQGVRSPAMPWQTSSPQQMSFPNQF 758

Query: 148 TEQARQPHTTEQIAHPHPVPEQEAEFPRVAGQNAA 252
           TEQ RQP  TE +A PHP+PEQEA FPR+A Q+A+
Sbjct: 759 TEQTRQPQMTEHVARPHPIPEQEAGFPRMAEQSAS 793


>gb|PIN18719.1| hypothetical protein CDL12_08611 [Handroanthus impetiginosus]
          Length = 686

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 42/106 (39%), Positives = 47/106 (44%), Gaps = 23/106 (21%)
 Frame = +1

Query: 4   EIENILNRFSSXXXXXXXXXXXXXXXXXXXXXX------------WQTSSSHQTSYANQF 147
           EIENILNRF S                                  W T+SS Q +YANQF
Sbjct: 581 EIENILNRFPSPFPPQRPYPGPRGPPRVARPPEMVEQGGRNPAMPWHTASSPQVTYANQF 640

Query: 148 TEQARQPHTTEQI-----------AHPHPVPEQEAEFPRVAGQNAA 252
            EQ RQ   TEQ+           AHPHP+ +QEAE   VAGQN A
Sbjct: 641 PEQTRQHQMTEQMAHPHPKMTERMAHPHPMSDQEAEVRHVAGQNVA 686


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