BLASTX nr result
ID: Rehmannia30_contig00001163
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00001163
(992 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_022882872.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 290 1e-93
ref|XP_022882871.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 285 2e-91
ref|XP_002281642.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 281 1e-90
ref|XP_022861160.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 277 1e-88
ref|XP_018844363.1| PREDICTED: RNA-binding protein CP29B, chloro... 276 1e-88
ref|XP_022861161.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 273 3e-87
gb|ESR42007.1| hypothetical protein CICLE_v10012331mg [Citrus cl... 271 1e-86
ref|XP_016496280.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 270 2e-86
ref|XP_011077346.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 269 5e-86
ref|XP_016496282.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 269 6e-86
ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 269 6e-86
ref|XP_011094656.1| 29 kDa ribonucleoprotein A, chloroplastic [S... 268 1e-85
gb|PIM97982.1| Splicing factor 3b, subunit 4 [Handroanthus impet... 268 3e-85
ref|XP_012840926.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 267 3e-85
gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Erythra... 267 8e-85
gb|KVH90450.1| Nucleotide-binding, alpha-beta plait [Cynara card... 266 2e-84
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 265 2e-84
ref|XP_023924938.1| 29 kDa ribonucleoprotein A, chloroplastic-li... 265 3e-84
ref|XP_016542741.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 265 5e-84
gb|PIN23370.1| Splicing factor 3b, subunit 4 [Handroanthus impet... 264 6e-84
>ref|XP_022882872.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X2 [Olea
europaea var. sylvestris]
Length = 322
Score = 290 bits (743), Expect = 1e-93
Identities = 164/246 (66%), Positives = 176/246 (71%), Gaps = 13/246 (5%)
Frame = +2
Query: 71 SYANPTSRFVRNVAIXXXXXXXXXXXX--GLDFS--ETRSFSPDLKLFVGNLPFNVDSAA 238
SYA P +F R A+ G DFS E RSFSPDLKLFVGNLPFNVDSA
Sbjct: 56 SYAEPVYKFARTAAVASELDELEMGEENEGFDFSSAEERSFSPDLKLFVGNLPFNVDSAV 115
Query: 239 LAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNS 418
LAGLFEQAG VEMVEVIYDK TGRSRGFGFVTMSTVEE E AAQQF+GYEL+GRP+RVNS
Sbjct: 116 LAGLFEQAGNVEMVEVIYDKLTGRSRGFGFVTMSTVEEAEVAAQQFNGYELEGRPMRVNS 175
Query: 419 GPPPAKRENSSF---GGSRENSSF---RGSRENSSFRG--GSRE-NXXXXXXXXXXXXXX 571
GPPP KRE SSF G RE SF RG RE SSFRG G R+ +
Sbjct: 176 GPPPPKREGSSFRGPRGDREGYSFRGPRGDREGSSFRGPRGDRDGSSFRGSRGGSRTSFD 235
Query: 572 XXXXVYVGNLAWGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNA 751
VYVGNL+WGVD+L LETLFSEQGKV EA VVYDRESGRSRGFGFVTYSS+ EV+NA
Sbjct: 236 NSNRVYVGNLSWGVDDLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSAHEVNNA 295
Query: 752 INSLDG 769
+ SLDG
Sbjct: 296 VESLDG 301
Score = 78.6 bits (192), Expect = 1e-12
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF +++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT S+ EV
Sbjct: 233 SFDNSNRVYVGNLSWGVDDLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSAHEV 292
Query: 356 EAAAQQFDGYELQGRPLRVNSGPPPAKRE 442
A + DG +L GR +RV+ R+
Sbjct: 293 NNAVESLDGTDLNGRSIRVSPAEARPSRQ 321
>ref|XP_022882871.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X1 [Olea
europaea var. sylvestris]
Length = 336
Score = 285 bits (729), Expect = 2e-91
Identities = 164/260 (63%), Positives = 176/260 (67%), Gaps = 27/260 (10%)
Frame = +2
Query: 71 SYANPTSRFVRNVAIXXXXXXXXXXXX--GLDFS--ETRSFSPDLKLFVGNLPFNVDSAA 238
SYA P +F R A+ G DFS E RSFSPDLKLFVGNLPFNVDSA
Sbjct: 56 SYAEPVYKFARTAAVASELDELEMGEENEGFDFSSAEERSFSPDLKLFVGNLPFNVDSAV 115
Query: 239 LAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNS 418
LAGLFEQAG VEMVEVIYDK TGRSRGFGFVTMSTVEE E AAQQF+GYEL+GRP+RVNS
Sbjct: 116 LAGLFEQAGNVEMVEVIYDKLTGRSRGFGFVTMSTVEEAEVAAQQFNGYELEGRPMRVNS 175
Query: 419 GPPPAKRENSSF---GGSRENSSF-----------------RGSRENSSFRG--GSRE-N 529
GPPP KRE SSF G RE SF RG RE SSFRG G R+ +
Sbjct: 176 GPPPPKREGSSFRGPRGDREGYSFRGPRGDREGEGYSFRGPRGDREGSSFRGPRGDRDGS 235
Query: 530 XXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLTLETLFSEQGKVREATVVYDRESGRSRGF 709
VYVGNL+WGVD+L LETLFSEQGKV EA VVYDRESGRSRGF
Sbjct: 236 SFRGSRGGSRTSFDNSNRVYVGNLSWGVDDLALETLFSEQGKVMEAKVVYDRESGRSRGF 295
Query: 710 GFVTYSSSDEVDNAINSLDG 769
GFVTYSS+ EV+NA+ SLDG
Sbjct: 296 GFVTYSSAHEVNNAVESLDG 315
Score = 78.6 bits (192), Expect = 1e-12
Identities = 39/89 (43%), Positives = 54/89 (60%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF +++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT S+ EV
Sbjct: 247 SFDNSNRVYVGNLSWGVDDLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSAHEV 306
Query: 356 EAAAQQFDGYELQGRPLRVNSGPPPAKRE 442
A + DG +L GR +RV+ R+
Sbjct: 307 NNAVESLDGTDLNGRSIRVSPAEARPSRQ 335
>ref|XP_002281642.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Vitis
vinifera]
Length = 288
Score = 281 bits (719), Expect = 1e-90
Identities = 156/232 (67%), Positives = 176/232 (75%), Gaps = 3/232 (1%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAG 265
+SRFVRNVA+ L SFSPDLKLFVGNLPFNVDSA LAGLFEQAG
Sbjct: 58 SSRFVRNVAVSSDYEQDEDV---LSDEGEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAG 114
Query: 266 GVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKREN 445
VEMVEVIYDK TGRSRGFGFVTMSTVEEVEAAAQQF+GYEL+GR LRVNSGPPPA+REN
Sbjct: 115 NVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPPPARREN 174
Query: 446 SSFGGSRENSSFRGSRENSSF---RGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVD 616
S+F G ENS+FRG EN++F RGG+ N +YVGNL+WGVD
Sbjct: 175 SNFRG--ENSNFRG--ENTNFRGPRGGANLN--------------STNRIYVGNLSWGVD 216
Query: 617 NLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
+L LETLFSEQGKV EA V+YDRE+GRSRGFGFVTY+S++EV+ AI SLDG+
Sbjct: 217 DLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGV 268
Score = 80.5 bits (197), Expect = 1e-13
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD AL LF + G V VIYD+ TGRSRGFGFVT ++ EEV A +
Sbjct: 205 RIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIES 264
Query: 374 FDGYELQGRPLRVNSGPPPAKRE 442
DG +L GR +RV +R+
Sbjct: 265 LDGVDLNGRSIRVTMAEARPRRQ 287
>ref|XP_022861160.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X1 [Olea
europaea var. sylvestris]
Length = 300
Score = 277 bits (708), Expect = 1e-88
Identities = 156/242 (64%), Positives = 169/242 (69%), Gaps = 6/242 (2%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXX----GLDFS--ETRSFSPDLKLFVGNLPFNVDSAALAG 247
TS+F R VA+ G DFS E SFSPDLKLFVGNLPFNVDSAALAG
Sbjct: 55 TSKFTRKVAVSSALDELEEEAGEENEGFDFSSPEDPSFSPDLKLFVGNLPFNVDSAALAG 114
Query: 248 LFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPP 427
LFEQAG VEMVEVIYDK TGRSRGFGFVTMST EE +AAQQF+GYE +GR LRVN+GPP
Sbjct: 115 LFEQAGNVEMVEVIYDKLTGRSRGFGFVTMSTAEEAASAAQQFNGYEFEGRQLRVNNGPP 174
Query: 428 PAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAW 607
P KRENSSFGG R S G+ +S R VYVGNLAW
Sbjct: 175 PPKRENSSFGGPRGGS---GTSSDSGNR------------------------VYVGNLAW 207
Query: 608 GVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGMVNILF 787
GVDNL LETLFSEQGKV EA VVYDRESGRSRGFGFVTYSS+DEV NA+ SL+GMV++
Sbjct: 208 GVDNLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSADEVYNAVESLNGMVHLFL 267
Query: 788 SR 793
R
Sbjct: 268 RR 269
>ref|XP_018844363.1| PREDICTED: RNA-binding protein CP29B, chloroplastic-like [Juglans
regia]
Length = 283
Score = 276 bits (706), Expect = 1e-88
Identities = 151/233 (64%), Positives = 166/233 (71%)
Frame = +2
Query: 74 YANPTSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLF 253
+ P+SRFVRNV + E R FSPDLKLFVGNLPFNVDSA LAGLF
Sbjct: 58 FHTPSSRFVRNVTLSSEFDQEEEV-------EERGFSPDLKLFVGNLPFNVDSAQLAGLF 110
Query: 254 EQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPA 433
E AG VEMVEVIYDKTTGRSRGFGFVTMSTVEE EAAAQQF+GYEL GR LRVN+GPPP
Sbjct: 111 ESAGNVEMVEVIYDKTTGRSRGFGFVTMSTVEETEAAAQQFNGYELDGRALRVNAGPPPP 170
Query: 434 KRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGV 613
+RE SSF G R SSF G + S GG R V+VGNLAWGV
Sbjct: 171 RREESSFRGPRGGSSFGGGQGGPSSGGGHR--------------------VHVGNLAWGV 210
Query: 614 DNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
D+L L++LFSEQGKV EA V+YDRESGRSRGFGFVT+SSS EV+NAI SLDG+
Sbjct: 211 DDLALQSLFSEQGKVVEARVIYDRESGRSRGFGFVTFSSSAEVNNAIESLDGV 263
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/83 (46%), Positives = 52/83 (62%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
++ VGNL + VD AL LF + G V VIYD+ +GRSRGFGFVT S+ EV A +
Sbjct: 200 RVHVGNLAWGVDDLALQSLFSEQGKVVEARVIYDRESGRSRGFGFVTFSSSAEVNNAIES 259
Query: 374 FDGYELQGRPLRVNSGPPPAKRE 442
DG +L GR LRV++ +R+
Sbjct: 260 LDGVDLNGRALRVSAAEARPRRQ 282
>ref|XP_022861161.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X2 [Olea
europaea var. sylvestris]
ref|XP_022861162.1| 29 kDa ribonucleoprotein A, chloroplastic-like isoform X2 [Olea
europaea var. sylvestris]
Length = 282
Score = 273 bits (697), Expect = 3e-87
Identities = 154/235 (65%), Positives = 165/235 (70%), Gaps = 6/235 (2%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXX----GLDFS--ETRSFSPDLKLFVGNLPFNVDSAALAG 247
TS+F R VA+ G DFS E SFSPDLKLFVGNLPFNVDSAALAG
Sbjct: 55 TSKFTRKVAVSSALDELEEEAGEENEGFDFSSPEDPSFSPDLKLFVGNLPFNVDSAALAG 114
Query: 248 LFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPP 427
LFEQAG VEMVEVIYDK TGRSRGFGFVTMST EE +AAQQF+GYE +GR LRVN+GPP
Sbjct: 115 LFEQAGNVEMVEVIYDKLTGRSRGFGFVTMSTAEEAASAAQQFNGYEFEGRQLRVNNGPP 174
Query: 428 PAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAW 607
P KRENSSFGG R S G+ +S R VYVGNLAW
Sbjct: 175 PPKRENSSFGGPRGGS---GTSSDSGNR------------------------VYVGNLAW 207
Query: 608 GVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
GVDNL LETLFSEQGKV EA VVYDRESGRSRGFGFVTYSS+DEV NA+ SL+GM
Sbjct: 208 GVDNLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSADEVYNAVESLNGM 262
Score = 76.3 bits (186), Expect = 4e-12
Identities = 36/83 (43%), Positives = 55/83 (66%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD+ AL LF + G V +V+YD+ +GRSRGFGFVT S+ +EV A +
Sbjct: 199 RVYVGNLAWGVDNLALETLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSSADEVYNAVES 258
Query: 374 FDGYELQGRPLRVNSGPPPAKRE 442
+G +L GR +RV+ +R+
Sbjct: 259 LNGMDLDGRSIRVSPAEARPRRQ 281
>gb|ESR42007.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
Length = 297
Score = 271 bits (694), Expect = 1e-86
Identities = 156/245 (63%), Positives = 173/245 (70%)
Frame = +2
Query: 89 SRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAGG 268
SRFVRNVA+ D S +FSPDLKLFVGNLPF+VDSA LAGLFE AG
Sbjct: 63 SRFVRNVAVSSEFDQEEDLLSDEDGS---NFSPDLKLFVGNLPFSVDSAQLAGLFETAGN 119
Query: 269 VEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKRENS 448
VEMVEVIYDK TGRSRGFGFVTMS+VEEVEAAAQQF+GYEL+GRPLRVNSGPPP +RE
Sbjct: 120 VEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPPRREEF 179
Query: 449 SFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLTL 628
S G RG + GG+R VYVGNL+WGVD+L L
Sbjct: 180 SPRGP------RGGGAGAPSSGGNR--------------------VYVGNLSWGVDDLAL 213
Query: 629 ETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGMVNILFSR*CSYL 808
ETLF EQGKV EA VVYDRESGRSRGFGFVTYSS++EVDNAI+SL+G+V+ LFS S L
Sbjct: 214 ETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVVSSLFSFSSSML 273
Query: 809 LANLF 823
A LF
Sbjct: 274 YAFLF 278
>ref|XP_016496280.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Nicotiana tabacum]
ref|XP_016496281.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X1 [Nicotiana tabacum]
Length = 284
Score = 270 bits (691), Expect = 2e-86
Identities = 150/229 (65%), Positives = 166/229 (72%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAG 265
+SRFVR V + E R+FSPDLK+FVGNLPF+ DSAALA LFE+AG
Sbjct: 52 SSRFVRKVTLSDFGQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAG 111
Query: 266 GVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKREN 445
VEMVEVIYDK TGRSRGFGFVTMS+ EEVEAA QQF+GYEL GR LRVN+GPPP +REN
Sbjct: 112 NVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERREN 171
Query: 446 SSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLT 625
SSF RENSSF RENSSFRGG VYVGNLAWGVD
Sbjct: 172 SSF---RENSSF---RENSSFRGG-----------RGGESFDSSNRVYVGNLAWGVDQDA 214
Query: 626 LETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LETLFSEQGKV +A VVYDR+SGRSRGFGFVTYSS++EV+NAI SLDG+
Sbjct: 215 LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGV 263
Score = 80.1 bits (196), Expect = 2e-13
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF +++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT S+ EEV
Sbjct: 194 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 253
Query: 356 EAAAQQFDGYELQGRPLRVN--SGPPPAKR 439
A + DG +L GR +RV+ PP ++
Sbjct: 254 NNAIESLDGVDLNGRAIRVSPAEARPPRRQ 283
>ref|XP_011077346.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Sesamum indicum]
Length = 277
Score = 269 bits (688), Expect = 5e-86
Identities = 150/236 (63%), Positives = 169/236 (71%), Gaps = 2/236 (0%)
Frame = +2
Query: 71 SYANPTSRFVRNVAIXXXXXXXXXXXXGLDFS--ETRSFSPDLKLFVGNLPFNVDSAALA 244
+YA+ TSRFV NVA+ LDFS E FSPDLKLFVGNLPF+VDSA LA
Sbjct: 51 TYAHRTSRFVSNVAVSSELDEEVEDE-SLDFSGSEEPRFSPDLKLFVGNLPFSVDSAGLA 109
Query: 245 GLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGP 424
GLFEQAG V+MVEVIYDK +GRSRGFGFVTMST+EEVEAAA++F+GYEL+GR LRVNSGP
Sbjct: 110 GLFEQAGNVQMVEVIYDKMSGRSRGFGFVTMSTIEEVEAAAEKFNGYELEGRVLRVNSGP 169
Query: 425 PPAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLA 604
PP+KRENS F G RGG+ + VYVGNLA
Sbjct: 170 PPSKRENSPFRGGP--------------RGGTNSD--------------NTNRVYVGNLA 201
Query: 605 WGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
WGVDNL LETLFSEQG V+EA VVYDRESGRSRGFGFVTYS ++EV+NAI SLDG+
Sbjct: 202 WGVDNLALETLFSEQGNVKEARVVYDRESGRSRGFGFVTYSCAEEVNNAIESLDGV 257
Score = 84.7 bits (208), Expect = 4e-15
Identities = 40/83 (48%), Positives = 55/83 (66%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD+ AL LF + G V+ V+YD+ +GRSRGFGFVT S EEV A +
Sbjct: 194 RVYVGNLAWGVDNLALETLFSEQGNVKEARVVYDRESGRSRGFGFVTYSCAEEVNNAIES 253
Query: 374 FDGYELQGRPLRVNSGPPPAKRE 442
DG +L GRP+RV+ +RE
Sbjct: 254 LDGVDLNGRPIRVSPAEARPRRE 276
>ref|XP_016496282.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like isoform
X2 [Nicotiana tabacum]
Length = 284
Score = 269 bits (688), Expect = 6e-86
Identities = 149/229 (65%), Positives = 166/229 (72%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAG 265
+SRFVR V + E R+FSPDLK+FVGNLPF+ DSAALA LFE+AG
Sbjct: 52 SSRFVRKVTLSDFGQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAG 111
Query: 266 GVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKREN 445
VEMVEVIYDK TGRSRGFGFVTMS+ EEVEAA QQF+GYEL GR LRVN+GPPP +REN
Sbjct: 112 NVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERREN 171
Query: 446 SSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLT 625
SSF RENSSF RENSSFRGG VYVGNLAWGVD
Sbjct: 172 SSF---RENSSF---RENSSFRGG-----------RGGESFDSSNRVYVGNLAWGVDQDA 214
Query: 626 LETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LETLFSEQGKV +A VVYDR+SGRSRGFGFVTYS+++EV+NAI SLDG+
Sbjct: 215 LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTAEEVNNAIESLDGV 263
Score = 81.6 bits (200), Expect = 5e-14
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF +++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT ST EEV
Sbjct: 194 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTAEEV 253
Query: 356 EAAAQQFDGYELQGRPLRVN--SGPPPAKR 439
A + DG +L GR +RV+ PP ++
Sbjct: 254 NNAIESLDGVDLNGRAIRVSPAEARPPRRQ 283
>ref|XP_009596607.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X1
[Nicotiana tomentosiformis]
ref|XP_009596608.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X1
[Nicotiana tomentosiformis]
Length = 284
Score = 269 bits (688), Expect = 6e-86
Identities = 149/229 (65%), Positives = 166/229 (72%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAG 265
+SRFVR V + E R+FSPDLK+FVGNLPF+ DSAALA LFE+AG
Sbjct: 52 SSRFVRKVTLSDFDQIEDVEDGDDGVEEERNFSPDLKIFVGNLPFSADSAALAELFERAG 111
Query: 266 GVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKREN 445
VEMVEVIYDK TGRSRGFGFVTMS+ EEVEAA QQF+GYEL GR LRVN+GPPP +REN
Sbjct: 112 NVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNAGPPPERREN 171
Query: 446 SSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLT 625
SSF RENSSF RENSSFRGG VYVGNLAWGVD
Sbjct: 172 SSF---RENSSF---RENSSFRGG-----------RGGGSFDSSNRVYVGNLAWGVDQDA 214
Query: 626 LETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LETLFSEQGKV +A VVYDR+SGRSRGFGFVTYS+++EV+NAI SLDG+
Sbjct: 215 LETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTAEEVNNAIESLDGV 263
Score = 81.6 bits (200), Expect = 5e-14
Identities = 42/90 (46%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF +++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT ST EEV
Sbjct: 194 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSTAEEV 253
Query: 356 EAAAQQFDGYELQGRPLRVN--SGPPPAKR 439
A + DG +L GR +RV+ PP ++
Sbjct: 254 NNAIESLDGVDLNGRAIRVSPAEARPPRRQ 283
>ref|XP_011094656.1| 29 kDa ribonucleoprotein A, chloroplastic [Sesamum indicum]
Length = 277
Score = 268 bits (685), Expect = 1e-85
Identities = 152/238 (63%), Positives = 168/238 (70%), Gaps = 5/238 (2%)
Frame = +2
Query: 74 YANPTSRFVRNVAIXXXXXXXXXXXXG---LDFS--ETRSFSPDLKLFVGNLPFNVDSAA 238
YA TS FVR VA+ DFS + SFSPDLKLFVGNLPF VDSAA
Sbjct: 47 YARSTSSFVRCVAVSSELEEEVEDGEEGQIFDFSGADQPSFSPDLKLFVGNLPFTVDSAA 106
Query: 239 LAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNS 418
LAGLFEQAG VEMVEVIYDK +GRSRGFGFVTMSTVEE EAAAQQF+GYELQGR LRVNS
Sbjct: 107 LAGLFEQAGNVEMVEVIYDKFSGRSRGFGFVTMSTVEETEAAAQQFNGYELQGRVLRVNS 166
Query: 419 GPPPAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGN 598
GPPPAK EN SF G+R RE +S+ ++ +YVGN
Sbjct: 167 GPPPAKSENPSFRGAR-------GRERTSYDSTNK--------------------LYVGN 199
Query: 599 LAWGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LAWGVDNL LETLFSEQG V+EA VVYD+ESGRSRGFGFVTYSS++EV++AI LDGM
Sbjct: 200 LAWGVDNLALETLFSEQGNVKEARVVYDKESGRSRGFGFVTYSSAEEVNSAIEELDGM 257
Score = 87.8 bits (216), Expect = 3e-16
Identities = 43/92 (46%), Positives = 59/92 (64%)
Frame = +2
Query: 167 ETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTV 346
E S+ KL+VGNL + VD+ AL LF + G V+ V+YDK +GRSRGFGFVT S+
Sbjct: 185 ERTSYDSTNKLYVGNLAWGVDNLALETLFSEQGNVKEARVVYDKESGRSRGFGFVTYSSA 244
Query: 347 EEVEAAAQQFDGYELQGRPLRVNSGPPPAKRE 442
EEV +A ++ DG +L GR +RV+ R+
Sbjct: 245 EEVNSAIEELDGMDLHGRAIRVSPAEARPSRQ 276
>gb|PIM97982.1| Splicing factor 3b, subunit 4 [Handroanthus impetiginosus]
Length = 284
Score = 268 bits (684), Expect = 3e-85
Identities = 151/238 (63%), Positives = 165/238 (69%), Gaps = 4/238 (1%)
Frame = +2
Query: 71 SYANPTSRFVRNVAIXXXXXXXXXXXX--GLDFSETR--SFSPDLKLFVGNLPFNVDSAA 238
+Y PTSRFVRNVA+ GLDFS+ SFSPDLKLFVGNLPF+VDSA
Sbjct: 54 NYVCPTSRFVRNVAVSSDLDEVLGDGEEDGLDFSDAEEPSFSPDLKLFVGNLPFSVDSAE 113
Query: 239 LAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNS 418
LAGLFEQ G VEMVEVIYDK +GRSRGFGFVTMST EE +AAAQ+ +GYELQGR LRVNS
Sbjct: 114 LAGLFEQTGNVEMVEVIYDKHSGRSRGFGFVTMSTKEEADAAAQKLNGYELQGRVLRVNS 173
Query: 419 GPPPAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGN 598
GPPP K ENS F GSR RE + +R VYVGN
Sbjct: 174 GPPPPKSENSLFRGSR-------GRERTGSNSSNR--------------------VYVGN 206
Query: 599 LAWGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LAWGVDN LE LFSEQG VREA VVYDRESGRSRGFGFVTY S++EV+NAI +LDGM
Sbjct: 207 LAWGVDNDALEALFSEQGNVREARVVYDRESGRSRGFGFVTYGSAEEVNNAIEALDGM 264
Score = 78.2 bits (191), Expect = 9e-13
Identities = 36/74 (48%), Positives = 50/74 (67%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD+ AL LF + G V V+YD+ +GRSRGFGFVT + EEV A +
Sbjct: 201 RVYVGNLAWGVDNDALEALFSEQGNVREARVVYDRESGRSRGFGFVTYGSAEEVNNAIEA 260
Query: 374 FDGYELQGRPLRVN 415
DG +L GR +RV+
Sbjct: 261 LDGMDLNGRSIRVS 274
>ref|XP_012840926.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Erythranthe
guttata]
Length = 274
Score = 267 bits (683), Expect = 3e-85
Identities = 150/235 (63%), Positives = 168/235 (71%), Gaps = 2/235 (0%)
Frame = +2
Query: 71 SYANPTSRFVRNVAIXXXXXXXXXXXXGLDFS--ETRSFSPDLKLFVGNLPFNVDSAALA 244
++A+ TSRFVR VAI G DFS E +SFSPDLKLFVGNLPFNVDSAALA
Sbjct: 52 NFAHTTSRFVRCVAISSEVDETVEEGEGEDFSAPEEQSFSPDLKLFVGNLPFNVDSAALA 111
Query: 245 GLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGP 424
GLFEQAG VEMVEVIYDK +GRSRGFGFVTMS++ E EAAAQQF+GYELQGR LRVNSGP
Sbjct: 112 GLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNSGP 171
Query: 425 PPAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLA 604
PPAK + + FGG R SS +R VYVGNL+
Sbjct: 172 PPAKSD-TPFGGPRRTSSGNTNR------------------------------VYVGNLS 200
Query: 605 WGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDG 769
WGVDN LETLFSEQG+V+EA VVYDRESGRSRGFGFVTYSS +EV++AI +LDG
Sbjct: 201 WGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEALDG 255
Score = 80.1 bits (196), Expect = 2e-13
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD++AL LF + G V+ V+YD+ +GRSRGFGFVT S+ EEV +A +
Sbjct: 193 RVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEA 252
Query: 374 FDGYELQGRPLRVN 415
DG +L GR +RV+
Sbjct: 253 LDGADLDGRSIRVS 266
>gb|EYU34456.1| hypothetical protein MIMGU_mgv1a010534mg [Erythranthe guttata]
Length = 309
Score = 267 bits (683), Expect = 8e-85
Identities = 150/235 (63%), Positives = 168/235 (71%), Gaps = 2/235 (0%)
Frame = +2
Query: 71 SYANPTSRFVRNVAIXXXXXXXXXXXXGLDFS--ETRSFSPDLKLFVGNLPFNVDSAALA 244
++A+ TSRFVR VAI G DFS E +SFSPDLKLFVGNLPFNVDSAALA
Sbjct: 87 NFAHTTSRFVRCVAISSEVDETVEEGEGEDFSAPEEQSFSPDLKLFVGNLPFNVDSAALA 146
Query: 245 GLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGP 424
GLFEQAG VEMVEVIYDK +GRSRGFGFVTMS++ E EAAAQQF+GYELQGR LRVNSGP
Sbjct: 147 GLFEQAGNVEMVEVIYDKLSGRSRGFGFVTMSSLAEAEAAAQQFNGYELQGRALRVNSGP 206
Query: 425 PPAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLA 604
PPAK + + FGG R SS +R VYVGNL+
Sbjct: 207 PPAKSD-TPFGGPRRTSSGNTNR------------------------------VYVGNLS 235
Query: 605 WGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDG 769
WGVDN LETLFSEQG+V+EA VVYDRESGRSRGFGFVTYSS +EV++AI +LDG
Sbjct: 236 WGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEALDG 290
Score = 80.1 bits (196), Expect = 2e-13
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD++AL LF + G V+ V+YD+ +GRSRGFGFVT S+ EEV +A +
Sbjct: 228 RVYVGNLSWGVDNSALETLFSEQGQVQEARVVYDRESGRSRGFGFVTYSSPEEVNSAIEA 287
Query: 374 FDGYELQGRPLRVN 415
DG +L GR +RV+
Sbjct: 288 LDGADLDGRSIRVS 301
>gb|KVH90450.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
scolymus]
Length = 301
Score = 266 bits (680), Expect = 2e-84
Identities = 146/231 (63%), Positives = 163/231 (70%)
Frame = +2
Query: 77 ANPTSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFE 256
A P+SR +RNVA+ D + ++FSPDLKLFVGNLPF VDSAALAGLFE
Sbjct: 56 ATPSSRIIRNVAVSSGLELDEGLSSDGDDEQQQNFSPDLKLFVGNLPFTVDSAALAGLFE 115
Query: 257 QAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAK 436
AG VEMVEVIYDK +GRSRGFGFVTMS+VEEV+ A Q+F+GYEL+GR LRVNSGPPP +
Sbjct: 116 SAGNVEMVEVIYDKVSGRSRGFGFVTMSSVEEVQEAVQKFNGYELEGRQLRVNSGPPP-R 174
Query: 437 RENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVD 616
RE SSFGG RE F G SF +R VYVGNLAW VD
Sbjct: 175 REESSFGGPREGGRFGGG--GRSFDNTNR--------------------VYVGNLAWSVD 212
Query: 617 NLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDG 769
NL LETLF EQG V EA VVYDRESGRSRGFGFVTYSS+DEV+NAI SL+G
Sbjct: 213 NLALETLFREQGNVMEAKVVYDRESGRSRGFGFVTYSSADEVNNAIESLNG 263
Score = 85.5 bits (210), Expect = 3e-15
Identities = 43/97 (44%), Positives = 62/97 (63%)
Frame = +2
Query: 173 RSFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEE 352
RSF +++VGNL ++VD+ AL LF + G V +V+YD+ +GRSRGFGFVT S+ +E
Sbjct: 194 RSFDNTNRVYVGNLAWSVDNLALETLFREQGNVMEAKVVYDRESGRSRGFGFVTYSSADE 253
Query: 353 VEAAAQQFDGYELQGRPLRVNSGPPPAKRENSSFGGS 463
V A + +G +L GR +RV+ P KR GG+
Sbjct: 254 VNNAIESLNGADLDGRNIRVSVAEAPQKRSCVCRGGA 290
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor
emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 265 bits (677), Expect = 2e-84
Identities = 149/230 (64%), Positives = 164/230 (71%), Gaps = 1/230 (0%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAG 265
+SRFVR V + E R+FSPDLK+FVGNL F+ DSAALA LFE+AG
Sbjct: 52 SSRFVRKVTLPDFDQIEDVEDGDEGVEEERNFSPDLKIFVGNLLFSADSAALAELFERAG 111
Query: 266 GVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKREN 445
VEMVEVIYDK TGRSRGFGFVTMS+ EEVEAA QQF+GYEL GR LRVNSGPPP KREN
Sbjct: 112 NVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVNSGPPPEKREN 171
Query: 446 SSFGGSRENSSFR-GSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNL 622
SSF RENSSFR GSR SF +R VYVGNLAWGVD
Sbjct: 172 SSF---RENSSFRGGSRGGGSFDSSNR--------------------VYVGNLAWGVDQD 208
Query: 623 TLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LETLFSEQGKV +A VVYDR+SGRSRGFGFVTYSS++EV+NAI SLDG+
Sbjct: 209 ALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGV 258
Score = 80.1 bits (196), Expect = 2e-13
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF +++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT S+ EEV
Sbjct: 189 SFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEV 248
Query: 356 EAAAQQFDGYELQGRPLRVN--SGPPPAKR 439
A + DG +L GR +RV+ PP ++
Sbjct: 249 NNAIESLDGVDLNGRAIRVSPAEARPPRRQ 278
>ref|XP_023924938.1| 29 kDa ribonucleoprotein A, chloroplastic-like [Quercus suber]
gb|POE95198.1| rna-binding protein cp29b, chloroplastic [Quercus suber]
Length = 281
Score = 265 bits (677), Expect = 3e-84
Identities = 145/229 (63%), Positives = 167/229 (72%)
Frame = +2
Query: 86 TSRFVRNVAIXXXXXXXXXXXXGLDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAG 265
+SRF RNVA+ L + F+PDLKLFVGNLPF VDSA LAGLFE AG
Sbjct: 58 SSRFARNVAVSSEFDQEEDL---LSDEDVPGFAPDLKLFVGNLPFTVDSAQLAGLFESAG 114
Query: 266 GVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKREN 445
VEMVEVIYDKTTGRSRGFGFVTMS+VEEVEAAAQQF+GYEL+GR +RVN+GPPP +RE+
Sbjct: 115 NVEMVEVIYDKTTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRAIRVNAGPPPPRRED 174
Query: 446 SSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLT 625
SSF G +SSFRG+R SF +R V+VGNLAWGVD+L
Sbjct: 175 SSFRG---DSSFRGNRGGGSFGSANR--------------------VHVGNLAWGVDDLA 211
Query: 626 LETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
LE LFSEQGKV EA VVYDRESGRSRGFGFVTYSS++EV++AI L+G+
Sbjct: 212 LENLFSEQGKVMEARVVYDRESGRSRGFGFVTYSSAEEVNSAIEYLNGV 260
Score = 82.4 bits (202), Expect = 3e-14
Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Frame = +2
Query: 176 SFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEV 355
SF ++ VGNL + VD AL LF + G V V+YD+ +GRSRGFGFVT S+ EEV
Sbjct: 191 SFGSANRVHVGNLAWGVDDLALENLFSEQGKVMEARVVYDRESGRSRGFGFVTYSSAEEV 250
Query: 356 EAAAQQFDGYELQGRPLRVN--SGPPPAKR 439
+A + +G +L+GRPLRV+ PP ++
Sbjct: 251 NSAIEYLNGVDLKGRPLRVSQADAKPPRRQ 280
>ref|XP_016542741.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Capsicum
annuum]
Length = 290
Score = 265 bits (676), Expect = 5e-84
Identities = 142/206 (68%), Positives = 156/206 (75%)
Frame = +2
Query: 155 LDFSETRSFSPDLKLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVT 334
L+ E R SPDLK+FVGNLPF+VDSAALA LFEQAG VEMVEVIYDK +GRSRGFGFVT
Sbjct: 88 LEVEEERDVSPDLKIFVGNLPFSVDSAALAELFEQAGEVEMVEVIYDKLSGRSRGFGFVT 147
Query: 335 MSTVEEVEAAAQQFDGYELQGRPLRVNSGPPPAKRENSSFGGSRENSSFRGSRENSSFRG 514
MS+ E VEAA QQF+GYE+ GRPLRVNSGPPP KRENS R+NSSFRG R S
Sbjct: 148 MSSKEAVEAACQQFNGYEIDGRPLRVNSGPPPPKRENS----FRDNSSFRGGRGGGSMDS 203
Query: 515 GSRENXXXXXXXXXXXXXXXXXXVYVGNLAWGVDNLTLETLFSEQGKVREATVVYDRESG 694
G+R VYVGNLAWGVD L LETLFSEQGKV EA VVYDR+SG
Sbjct: 204 GNR--------------------VYVGNLAWGVDQLALETLFSEQGKVVEAKVVYDRDSG 243
Query: 695 RSRGFGFVTYSSSDEVDNAINSLDGM 772
RSRGFGFVTYSS++EV+NAI SLDG+
Sbjct: 244 RSRGFGFVTYSSAEEVNNAIESLDGV 269
Score = 79.3 bits (194), Expect = 4e-13
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
+++VGNL + VD AL LF + G V +V+YD+ +GRSRGFGFVT S+ EEV A +
Sbjct: 206 RVYVGNLAWGVDQLALETLFSEQGKVVEAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIES 265
Query: 374 FDGYELQGRPLRVN--SGPPPAKR 439
DG +L+GR +RV+ PP ++
Sbjct: 266 LDGVDLEGRTIRVSPAEARPPRRQ 289
>gb|PIN23370.1| Splicing factor 3b, subunit 4 [Handroanthus impetiginosus]
Length = 284
Score = 264 bits (675), Expect = 6e-84
Identities = 145/237 (61%), Positives = 164/237 (69%), Gaps = 2/237 (0%)
Frame = +2
Query: 68 GSYANPTSRFVRNVAIXXXXXXXXXXXXGLDFSETRS--FSPDLKLFVGNLPFNVDSAAL 241
GSY++P SRF VA LDFS ++ FSP LKLFVGNLPF+VDSA L
Sbjct: 55 GSYSHPISRFTLKVATLDEVEEEGEEDESLDFSGSKEPRFSPKLKLFVGNLPFSVDSAGL 114
Query: 242 AGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQFDGYELQGRPLRVNSG 421
AGLFEQ G V+MVEVIYDK +GRS+GFGFVTMSTVEEV+AAA+QFDGYEL+GR LRVN+G
Sbjct: 115 AGLFEQVGNVQMVEVIYDKNSGRSKGFGFVTMSTVEEVKAAAKQFDGYELEGRVLRVNTG 174
Query: 422 PPPAKRENSSFGGSRENSSFRGSRENSSFRGGSRENXXXXXXXXXXXXXXXXXXVYVGNL 601
PPP+KREN S R SS + + VYVGNL
Sbjct: 175 PPPSKRENYSSRRPRGGSSSDNTNK-----------------------------VYVGNL 205
Query: 602 AWGVDNLTLETLFSEQGKVREATVVYDRESGRSRGFGFVTYSSSDEVDNAINSLDGM 772
AWGVDNLTLETLF EQGKV EA VVYDRESGRSRGFGFVTYSS +EV+NA+ SLDG+
Sbjct: 206 AWGVDNLTLETLFREQGKVMEALVVYDRESGRSRGFGFVTYSSPEEVENAVRSLDGI 262
Score = 83.2 bits (204), Expect = 1e-14
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = +2
Query: 194 KLFVGNLPFNVDSAALAGLFEQAGGVEMVEVIYDKTTGRSRGFGFVTMSTVEEVEAAAQQ 373
K++VGNL + VD+ L LF + G V V+YD+ +GRSRGFGFVT S+ EEVE A +
Sbjct: 199 KVYVGNLAWGVDNLTLETLFREQGKVMEALVVYDRESGRSRGFGFVTYSSPEEVENAVRS 258
Query: 374 FDGYELQGRPLRVNSGPPPAKRENS 448
DG +L GR +RV+ P ++R+ S
Sbjct: 259 LDGIDLNGRSIRVSPAEPRSRRDFS 283