BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00001145
         (1512 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu...   603   0.0  
gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu...   600   0.0  
gb|ONM55518.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   579   0.0  
gb|AQK62698.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma...   579   0.0  
gb|ONM07070.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   578   0.0  
gb|ONM33873.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   580   0.0  
gb|AQK50169.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   579   0.0  
gb|ONL98233.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma...   580   0.0  
gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   579   0.0  
gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   579   0.0  
gb|ONL94081.1| Retrovirus-related Pol polyprotein LINE-1 [Zea ma...   579   0.0  
gb|ONM03863.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   577   0.0  
gb|ONM11626.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   570   0.0  
gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   576   0.0  
gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   576   0.0  
gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   575   0.0  
gb|ONM29620.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   572   0.0  
gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   574   0.0  
gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   574   0.0  
gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]   573   0.0  

>gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 819

 Score =  603 bits (1555), Expect = 0.0
 Identities = 286/504 (56%), Positives = 381/504 (75%), Gaps = 1/504 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKINI 182
            T+KSG   SQID+FL RK+DRK C +CKVIPGESLTTQHR+LV+D+++     ++ +  +
Sbjct: 66   TYKSGMVCSQIDFFLVRKSDRKFCMDCKVIPGESLTTQHRVLVMDVRVKRRMERKGQDKV 125

Query: 183  PRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNG-NK 359
            PRI+WW LK  + +  F++  +E   W  +  A+E W  +   +++IAKETLG S G   
Sbjct: 126  PRIRWWKLKG-DDQGRFLRKALEEGSWDKQGNANEMWEGMAKVIRRIAKETLGESRGFGP 184

Query: 360  WNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYEDF 539
              KESWWW   +QEKVK KRT YK+  + +N E+ + YK AK+E ++A+ EA+ +AY+  
Sbjct: 185  RGKESWWWEANVQEKVKVKRTCYKIWSTGRNAESWENYKAAKREAKKAVSEARARAYDGL 244

Query: 540  YKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLFN 719
            Y  L TKEGE++IY++AK R+++TRDL Q+KCIKD    +LV D DIK+RWR YF++LFN
Sbjct: 245  YTSLGTKEGEQNIYRLAKSRDRRTRDLEQVKCIKDGEGRVLVSDMDIKERWRSYFHSLFN 304

Query: 720  EPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLGG 899
            E  ++ +    + + E   N T+ RRI+  E  +AL +++ GKAVG D IPIE WK LG 
Sbjct: 305  E-SQDRLQSYRVDRREEGLNYTYCRRIREVEVREALKRLENGKAVGPDTIPIEVWKTLGA 363

Query: 900  VGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERV 1079
             GISWLTKLFN I+++ KMP+EWR+S LIPIYKNKGDIQ+CANYRGIKL+SHTMKLWERV
Sbjct: 364  KGISWLTKLFNEIMRSNKMPEEWRRSTLIPIYKNKGDIQDCANYRGIKLMSHTMKLWERV 423

Query: 1080 IEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVN 1259
            IE R+R ET + +NQFGFMPGRST+EAI+L+RRL EQY  +++DLHMVF+DLEKAYDRV 
Sbjct: 424  IERRLRQETQVTENQFGFMPGRSTMEAIYLLRRLMEQYRTQQKDLHMVFVDLEKAYDRVP 483

Query: 1260 RDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFI 1439
            R ++W  LEK+G++IAYI AIKDMY+G  T +RT +G+S +FP TIGLHQGS LSPYLF 
Sbjct: 484  RQVLWEALEKKGVRIAYIRAIKDMYEGAKTSVRTQSGVSEDFPITIGLHQGSTLSPYLFT 543

Query: 1440 LIIDEITKHLQKSIPECMLFADDI 1511
            L++D +T+H+Q+ +P CMLFADDI
Sbjct: 544  LVMDALTEHVQEPVPRCMLFADDI 567


>gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 925

 Score =  600 bits (1548), Expect = 0.0
 Identities = 286/504 (56%), Positives = 378/504 (75%), Gaps = 1/504 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKINI 182
            T+KSG   SQID+FL RK+DRK C +CKVIP ESLTTQHR+LV+D+++     ++    +
Sbjct: 258  TYKSGMVCSQIDFFLVRKSDRKFCMDCKVIPSESLTTQHRVLVMDVRVKKRMERKGHDKV 317

Query: 183  PRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNG-NK 359
            PRI+WW LK  + +  F++  +E   W  +D A+E W  +   +++IAKETLG S G   
Sbjct: 318  PRIRWWKLKG-DDQGRFLRKALEEGSWDKQDNANEMWEGMAKVIRRIAKETLGESRGFGP 376

Query: 360  WNKESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYEDF 539
              KESWWW   +QEKVK KRT YK+  + +N E+ + YK AK+EV++A+ EA+ +AY+  
Sbjct: 377  RGKESWWWEANVQEKVKVKRTCYKIWSTGRNAESWENYKAAKREVKKAVSEARARAYDGL 436

Query: 540  YKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLFN 719
            Y  L TKEGE+ IY++AK R+++TRDL Q+KCIKD    +LV D DIK+RWR YF++LF 
Sbjct: 437  YTSLGTKEGEQSIYRLAKSRDRRTRDLEQVKCIKDGEGRVLVSDMDIKERWRSYFHSLFT 496

Query: 720  EPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLGG 899
            E + + +    + + E   N T+ RRI   E  +AL +++ GKAVG D+IPIE WK LG 
Sbjct: 497  EDQ-DRLQSYRIDRREEGLNYTYCRRIGEVEVREALKRLENGKAVGPDNIPIEVWKTLGA 555

Query: 900  VGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWERV 1079
             GISWLTKLFN I+++ KMP+EWR+S LIPIYKNKGDIQ+CANYRGIKL+SHTMKLWERV
Sbjct: 556  KGISWLTKLFNEIMRSNKMPEEWRRSTLIPIYKNKGDIQDCANYRGIKLMSHTMKLWERV 615

Query: 1080 IEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRVN 1259
            IE R+R ET + +NQFGFMPGRST+EAI L+RRL EQY  +++DLHMVF+DLEKAYDRV 
Sbjct: 616  IERRLRQETQVTENQFGFMPGRSTMEAIFLLRRLMEQYRTQQKDLHMVFVDLEKAYDRVP 675

Query: 1260 RDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLFI 1439
            R ++W  LEK+G++IAYI AIKDMY+G  T +RT +G+S +FP TIGLHQGS LSPYLF 
Sbjct: 676  RQVLWEALEKKGVRIAYIRAIKDMYEGAKTSVRTQSGVSEDFPITIGLHQGSTLSPYLFT 735

Query: 1440 LIIDEITKHLQKSIPECMLFADDI 1511
            L++D +T+H+Q+ +P CMLFADDI
Sbjct: 736  LVMDALTEHIQEPVPRCMLFADDI 759


>gb|ONM55518.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 822

 Score =  579 bits (1493), Expect = 0.0
 Identities = 278/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 72   TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 130

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 131  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 189

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 190  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 249

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 250  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 309

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 310  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 367

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 368  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 427

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 428  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 487

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 488  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 547

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 548  ALVIDEVTRDIQGVLPWCMLFADDV 572


>gb|AQK62698.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK62701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 854

 Score =  579 bits (1493), Expect = 0.0
 Identities = 278/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 104  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 162

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 163  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 221

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 222  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 281

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 282  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 341

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 342  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 399

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 400  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 459

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 460  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 519

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 520  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 579

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 580  ALVIDEVTRDIQGVLPWCMLFADDV 604


>gb|ONM07070.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 822

 Score =  578 bits (1490), Expect = 0.0
 Identities = 277/505 (54%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 72   TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 130

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 131  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 189

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 190  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 249

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 250  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 309

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 310  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 367

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 368  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 427

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 428  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 487

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LE+  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 488  PRSVMWWALERHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 547

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 548  ALVIDEVTRDIQGVLPWCMLFADDV 572


>gb|ONM33873.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 938

 Score =  580 bits (1496), Expect = 0.0
 Identities = 279/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQHRL+V D +   I L+R K N 
Sbjct: 188  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHRLVVADFRF-KIRLQRNKHNK 246

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 247  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 305

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 306  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 365

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 366  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 425

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 426  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 483

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 484  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 543

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 544  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 603

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 604  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 663

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 664  ALVIDEVTRDIQGVLPWCMLFADDV 688


>gb|AQK50169.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 940

 Score =  579 bits (1493), Expect = 0.0
 Identities = 278/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 190  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 248

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 249  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 307

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 308  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 367

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 368  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 427

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 428  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 485

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 486  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 545

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 546  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 605

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 606  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 665

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 666  ALVIDEVTRDIQGVLPWCMLFADDV 690


>gb|ONL98233.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK53188.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  580 bits (1496), Expect = 0.0
 Identities = 279/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQHRL+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHRLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|ONM55942.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  579 bits (1493), Expect = 0.0
 Identities = 278/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|AQK98364.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  579 bits (1493), Expect = 0.0
 Identities = 278/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|ONL94081.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|ONM09892.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|ONM36701.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
 gb|AQK59578.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  579 bits (1493), Expect = 0.0
 Identities = 278/505 (55%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|ONM03863.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  577 bits (1488), Expect = 0.0
 Identities = 277/505 (54%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K + 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHSK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|ONM11626.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 822

 Score =  570 bits (1469), Expect = 0.0
 Identities = 274/505 (54%), Positives = 368/505 (72%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+  D +   I L+R K N 
Sbjct: 72   TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVAADFRF-KIRLQRNKHNK 130

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F + ++E   W  E  ++  W  +   ++KIA E  G+S GN+
Sbjct: 131  VTRTKWWKLKG-DVAQTFKERVIEEGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNR 189

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +A+++
Sbjct: 190  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDN 249

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK+E+IK+RW+ YFN LF
Sbjct: 250  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLF 309

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE +  EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 310  NGG--NESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 367

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +T +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 368  DIEIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 427

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 428  VIEHRLRKLTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 487

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 488  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 547

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L IDE+T+ +Q  IP CMLFADD+
Sbjct: 548  ALAIDEVTRDIQGDIPWCMLFADDV 572


>gb|ONM54584.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  576 bits (1485), Expect = 0.0
 Identities = 277/505 (54%), Positives = 368/505 (72%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWE 
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWEI 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|ONM55524.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score =  576 bits (1485), Expect = 0.0
 Identities = 277/505 (54%), Positives = 368/505 (72%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 288  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 346

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F K ++E   W  E+ A+  W  + T ++KIA E  G+S GN+
Sbjct: 347  VTRTKWWKLKG-DVAQTFKKRVIEEGPWAGEEDANIMWRKMATCIRKIASEEFGLSQGNR 405

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 406  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 465

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 466  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 525

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 526  NGG--NESATIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 583

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 584  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 643

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 644  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 703

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALS YLF
Sbjct: 704  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSTYLF 763

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 764  ALVIDEVTRDIQGVLPWCMLFADDV 788


>gb|AQK92036.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  575 bits (1481), Expect = 0.0
 Identities = 276/505 (54%), Positives = 367/505 (72%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK D   C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDMHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F + ++E   W  E  A+  W  + T ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKERVIEEGPWAGEGDANIMWRKMATCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +AY+D
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAYDD 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKSEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE    EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESATIELDEPFDDNNRGFVRRIQKYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +  +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRANRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  +P CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGVLPWCMLFADDV 766


>gb|ONM29620.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 934

 Score =  572 bits (1474), Expect = 0.0
 Identities = 274/505 (54%), Positives = 370/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 184  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 242

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F + ++E   W  E  ++  W  +   ++KIA E  G+S GN+
Sbjct: 243  VTRTKWWKLKG-DVAQTFKERVIEEGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNR 301

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +A+++
Sbjct: 302  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDN 361

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIK+E   +LVK+E+IK+RW+ YFN LF
Sbjct: 362  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKNEANQLLVKNEEIKNRWKEYFNKLF 421

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE +  EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 422  NGG--NESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 479

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +T +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 480  DIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 539

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 540  VIEHRLRKLTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 599

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 600  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 659

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  IP CMLFADD+
Sbjct: 660  ALVIDEVTRDIQGDIPWCMLFADDV 684


>gb|AQK86945.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  574 bits (1480), Expect = 0.0
 Identities = 275/505 (54%), Positives = 370/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLRRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F + ++E   W  E  ++  W  +   ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKERVIEEGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +A+++
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDN 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK+E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE +  EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +T +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKLTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  IP CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGDIPWCMLFADDV 766


>gb|ONM52836.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1016

 Score =  574 bits (1479), Expect = 0.0
 Identities = 275/505 (54%), Positives = 370/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 266  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 324

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F + ++E   W  E  ++  W  +   ++KIA E  G+S GN+
Sbjct: 325  VTRTKWWKLKG-DVAQTFKERVIEEGPWAEEGDSNIMWRKMAMCIRKIASEEFGLSQGNR 383

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +A+++
Sbjct: 384  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRARGQAFDN 443

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK+E+IK+RW+ YFN LF
Sbjct: 444  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLF 503

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE +  EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 504  NGG--NESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 561

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +T +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 562  DIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 621

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 622  VIEHRLRKLTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 681

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 682  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 741

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  IP CMLFADD+
Sbjct: 742  ALVIDEVTRDIQGDIPWCMLFADDV 766


>gb|ONM38170.1| Retrovirus-related Pol polyprotein LINE-1 [Zea mays]
          Length = 1038

 Score =  573 bits (1478), Expect = 0.0
 Identities = 275/505 (54%), Positives = 369/505 (73%), Gaps = 2/505 (0%)
 Frame = +3

Query: 3    TFKSGPNKSQIDYFLTRKNDRKICKNCKVIPGESLTTQHRLLVLDIKLINIHLKRKKIN- 179
            TF SG + SQID+ L RK DR  C +CKVIPGE + TQH+L+V D +   I L+R K N 
Sbjct: 288  TFSSGQHTSQIDFVLLRKEDRHACLDCKVIPGECVVTQHKLVVADFRF-KIRLQRNKHNK 346

Query: 180  IPRIKWWNLKNIEKRDSFVKSLVETIDWKVEDKADETWNYVTTQMKKIAKETLGVSNGNK 359
            + R KWW LK  +   +F + ++E   W  E   +  W  +   ++KIA E  G+S GN+
Sbjct: 347  VTRTKWWKLKG-DVAQTFKERVIEEGPWAEEGDINIMWRKMAVCIRKIASEEFGLSQGNR 405

Query: 360  WN-KESWWWNQEIQEKVKEKRTSYKVLYSCKNEENLKRYKDAKKEVRRAIYEAKTKAYED 536
               K++WWWN+++Q+ +KEK+  YK L+  K  EN+++Y+ AKK  +RA+  A+ +A+++
Sbjct: 406  REVKDTWWWNEDVQKAIKEKKDCYKRLHHDKCAENIEKYRIAKKSAKRAVSRAQGQAFDN 465

Query: 537  FYKKLDTKEGEKDIYKIAKFREKQTRDLTQIKCIKDENENILVKDEDIKDRWRRYFNNLF 716
             Y++LDTK+GEKDIY++AK RE++TRD+ Q+KCIKDE   +LVK+E+IK+RW+ YFN LF
Sbjct: 466  LYQRLDTKQGEKDIYRMAKIRERKTRDVNQVKCIKDEANQLLVKNEEIKNRWKEYFNKLF 525

Query: 717  NEPKRNEVTLGELGQSELNRNRTFYRRIQLHETEKALNKMKTGKAVGLDDIPIEAWKCLG 896
            N    NE +  EL +   + NR F RRIQ +E ++AL +MK GKA+G D IPIE W+CLG
Sbjct: 526  NGG--NESSTIELDEPFDDNNRGFVRRIQEYEVKEALKRMKVGKAMGPDGIPIEVWRCLG 583

Query: 897  GVGISWLTKLFNVILKTKKMPDEWRKSILIPIYKNKGDIQNCANYRGIKLISHTMKLWER 1076
             + I WLTKLFN I +T +MPDEWR+S L+PI+KNKGD+Q+C NYRGIKL+SHTMKLWER
Sbjct: 584  DIAIVWLTKLFNTIFRTNRMPDEWRRSTLVPIFKNKGDVQSCTNYRGIKLMSHTMKLWER 643

Query: 1077 VIEARIRNETSILDNQFGFMPGRSTIEAIHLIRRLCEQYNERKQDLHMVFIDLEKAYDRV 1256
            VIE R+R  TS+  NQFGFMPGRST+EAI L+R+L E++ E+K+DLHMVFIDLEKAYD+V
Sbjct: 644  VIEHRLRKMTSVTQNQFGFMPGRSTMEAIFLLRQLMERFREQKKDLHMVFIDLEKAYDKV 703

Query: 1257 NRDIMWRVLEKRGIKIAYIDAIKDMYDGITTCIRTPTGISSEFPNTIGLHQGSALSPYLF 1436
             R +MW  LEK  +   YI+ IKDMY  + T +RT  G + +FP  IGLHQGSALSPYLF
Sbjct: 704  PRSVMWWALEKHKVATKYINLIKDMYTNVVTSVRTSDGDTDDFPINIGLHQGSALSPYLF 763

Query: 1437 ILIIDEITKHLQKSIPECMLFADDI 1511
             L+IDE+T+ +Q  IP CMLFADD+
Sbjct: 764  TLVIDEVTRDIQGDIPWCMLFADDV 788