BLASTX nr result
ID: Rehmannia30_contig00000156
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia30_contig00000156
(540 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071173.1| photosystem II core complex proteins psbY, c... 79 6e-15
gb|PNX78334.1| photosystem II core complex proteins psbY chlorop... 73 3e-14
gb|PNX57688.1| photosystem II core complex proteins psbY chlorop... 73 6e-14
ref|XP_011086704.1| photosystem II core complex proteins psbY, c... 74 4e-13
ref|XP_010531459.1| PREDICTED: photosystem II core complex prote... 74 6e-13
ref|XP_022844653.1| photosystem II core complex proteins psbY, c... 72 3e-12
ref|XP_004502351.1| PREDICTED: photosystem II core complex prote... 72 3e-12
gb|EEF47588.1| photosystem II core complex proteins psbY, chloro... 72 4e-12
ref|XP_002515034.2| PREDICTED: photosystem II core complex prote... 72 4e-12
dbj|GAU35918.1| hypothetical protein TSUD_69510 [Trifolium subte... 72 4e-12
ref|XP_021633556.1| photosystem II core complex proteins psbY, c... 71 7e-12
ref|XP_012085559.1| photosystem II core complex proteins psbY, c... 71 7e-12
ref|XP_015943855.1| photosystem II core complex proteins psbY, c... 70 7e-12
dbj|GAV59798.1| PsbY domain-containing protein [Cephalotus folli... 71 7e-12
ref|XP_021630023.1| photosystem II core complex proteins psbY, c... 71 7e-12
ref|XP_003601864.2| photosystem II core complex family psbY prot... 71 7e-12
gb|KCW86607.1| hypothetical protein EUGRSUZ_B03236 [Eucalyptus g... 71 7e-12
ref|XP_008367044.2| PREDICTED: LOW QUALITY PROTEIN: photosystem ... 71 8e-12
ref|XP_009359261.1| PREDICTED: photosystem II core complex prote... 71 8e-12
ref|XP_008361814.1| PREDICTED: photosystem II core complex prote... 71 8e-12
>ref|XP_011071173.1| photosystem II core complex proteins psbY, chloroplastic [Sesamum
indicum]
Length = 197
Score = 79.0 bits (193), Expect = 6e-15
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = +3
Query: 3 FFHPPXXXXXXXXXXXXXXXDNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
FFHPP DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS+
Sbjct: 142 FFHPPEASAGEIANLAEAAADNRGQLLLFVVAPAILWVLYNILQPALNQINRMRSE 197
Score = 58.2 bits (139), Expect = 4e-07
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRG LL + PA+LWV YNILQPALNQINRMRS
Sbjct: 90 DNRGIALLIPLVPAVLWVLYNILQPALNQINRMRS 124
>gb|PNX78334.1| photosystem II core complex proteins psbY chloroplastic-like,
partial [Trifolium pratense]
Length = 54
Score = 73.2 bits (178), Expect = 3e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRSD
Sbjct: 19 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRSD 54
>gb|PNX57688.1| photosystem II core complex proteins psbY chloroplastic-like
[Trifolium pratense]
Length = 78
Score = 73.2 bits (178), Expect = 6e-14
Identities = 35/36 (97%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRSD
Sbjct: 43 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRSD 78
>ref|XP_011086704.1| photosystem II core complex proteins psbY, chloroplastic [Sesamum
indicum]
Length = 186
Score = 73.9 bits (180), Expect = 4e-13
Identities = 37/56 (66%), Positives = 38/56 (67%)
Frame = +3
Query: 3 FFHPPXXXXXXXXXXXXXXXDNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
F HP DNRGQLLLFVVAPAI+WV YNILQPALNQINRMRSD
Sbjct: 131 FLHPAEASAREIAALAEVPADNRGQLLLFVVAPAIVWVLYNILQPALNQINRMRSD 186
Score = 56.6 bits (135), Expect = 1e-06
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRG LL + PA+LWV YNI QPALNQINRMRS
Sbjct: 79 DNRGIALLLPLVPAVLWVLYNIFQPALNQINRMRS 113
>ref|XP_010531459.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
[Tarenaya hassleriana]
Length = 189
Score = 73.6 bits (179), Expect = 6e-13
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPA+LWVAYNILQPALNQ+NRMRSD
Sbjct: 154 DNRGQLLLFVVAPALLWVAYNILQPALNQLNRMRSD 189
Score = 54.3 bits (129), Expect = 9e-06
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRG LL + PAI WV +NILQPALNQ+NRMRS
Sbjct: 80 DNRGLALLLPIVPAIGWVLFNILQPALNQLNRMRS 114
>ref|XP_022844653.1| photosystem II core complex proteins psbY, chloroplastic-like [Olea
europaea var. sylvestris]
Length = 196
Score = 72.0 bits (175), Expect = 3e-12
Identities = 38/57 (66%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 FFHPPXXXXXXXXXXXXXXX-DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
F HPP DNRGQLLLFVV PAILWV YNILQPALNQINRMRSD
Sbjct: 140 FMHPPEASASEIVMIADAATSDNRGQLLLFVVTPAILWVLYNILQPALNQINRMRSD 196
>ref|XP_004502351.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Cicer arietinum]
Length = 199
Score = 72.0 bits (175), Expect = 3e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVV+PAILWV YNILQPALNQINRMRSD
Sbjct: 164 DNRGQLLLFVVSPAILWVLYNILQPALNQINRMRSD 199
>gb|EEF47588.1| photosystem II core complex proteins psbY, chloroplast precursor
[Ricinus communis]
Length = 195
Score = 71.6 bits (174), Expect = 4e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS+
Sbjct: 160 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRSE 195
>ref|XP_002515034.2| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
[Ricinus communis]
Length = 199
Score = 71.6 bits (174), Expect = 4e-12
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS+
Sbjct: 164 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRSE 199
>dbj|GAU35918.1| hypothetical protein TSUD_69510 [Trifolium subterraneum]
Length = 206
Score = 71.6 bits (174), Expect = 4e-12
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVV PAILWV YNILQPALNQINRMRSD
Sbjct: 171 DNRGQLLLFVVTPAILWVLYNILQPALNQINRMRSD 206
Score = 57.8 bits (138), Expect = 6e-07
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRG LL + PAI WV YNILQPALNQINRMR+D
Sbjct: 97 DNRGLALLLPLIPAIAWVLYNILQPALNQINRMRND 132
>ref|XP_021633556.1| photosystem II core complex proteins psbY, chloroplastic-like
[Manihot esculenta]
gb|OAY32458.1| hypothetical protein MANES_13G019200 [Manihot esculenta]
Length = 193
Score = 70.9 bits (172), Expect = 7e-12
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQ+NRMRS+
Sbjct: 158 DNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSE 193
Score = 55.5 bits (132), Expect = 4e-06
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD*EEKGYI 191
DNRG LL + PAI WV +NILQPALNQ+NRMR E KG I
Sbjct: 86 DNRGTALLLPIIPAIAWVLFNILQPALNQLNRMR---ETKGVI 125
>ref|XP_012085559.1| photosystem II core complex proteins psbY, chloroplastic [Jatropha
curcas]
gb|KDP26720.1| hypothetical protein JCGZ_17878 [Jatropha curcas]
Length = 193
Score = 70.9 bits (172), Expect = 7e-12
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQ+NRMRS+
Sbjct: 158 DNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSE 193
>ref|XP_015943855.1| photosystem II core complex proteins psbY, chloroplastic isoform X1
[Arachis duranensis]
Length = 160
Score = 70.1 bits (170), Expect = 7e-12
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRGQLLLFVVAPAILWV YNILQPALNQ+NRMRS
Sbjct: 125 DNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRS 159
>dbj|GAV59798.1| PsbY domain-containing protein [Cephalotus follicularis]
Length = 195
Score = 70.9 bits (172), Expect = 7e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS
Sbjct: 160 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 194
Score = 55.1 bits (131), Expect = 5e-06
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRG LL + PAI WV +NILQPALNQINRMRS
Sbjct: 89 DNRGLALLLPLIPAIAWVLFNILQPALNQINRMRS 123
>ref|XP_021630023.1| photosystem II core complex proteins psbY, chloroplastic-like
[Manihot esculenta]
gb|OAY34419.1| hypothetical protein MANES_12G018800 [Manihot esculenta]
Length = 197
Score = 70.9 bits (172), Expect = 7e-12
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRGQLLLFVVAPAILWV YNILQPALNQ+NRMRS+
Sbjct: 162 DNRGQLLLFVVAPAILWVLYNILQPALNQLNRMRSE 197
>ref|XP_003601864.2| photosystem II core complex family psbY protein [Medicago
truncatula]
gb|AFK43145.1| unknown [Medicago truncatula]
gb|AES72115.2| photosystem II core complex family psbY protein [Medicago
truncatula]
Length = 197
Score = 70.9 bits (172), Expect = 7e-12
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRSD 170
DNRG LLLFVVAPAILWV YNILQPALNQINRMRSD
Sbjct: 162 DNRGTLLLFVVAPAILWVLYNILQPALNQINRMRSD 197
Score = 62.8 bits (151), Expect = 8e-09
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRG LLLFVVAPAI WV +NILQPALNQINRMR+
Sbjct: 88 DNRGTLLLFVVAPAIGWVLFNILQPALNQINRMRN 122
>gb|KCW86607.1| hypothetical protein EUGRSUZ_B03236 [Eucalyptus grandis]
Length = 198
Score = 70.9 bits (172), Expect = 7e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS
Sbjct: 163 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 197
Score = 55.8 bits (133), Expect = 3e-06
Identities = 26/35 (74%), Positives = 28/35 (80%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRG LL + PAI WV +NILQPALNQINRMRS
Sbjct: 91 DNRGLALLLPIIPAIAWVLFNILQPALNQINRMRS 125
>ref|XP_008367044.2| PREDICTED: LOW QUALITY PROTEIN: photosystem II core complex
proteins psbY, chloroplastic-like [Malus domestica]
Length = 199
Score = 70.9 bits (172), Expect = 8e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS
Sbjct: 165 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 199
>ref|XP_009359261.1| PREDICTED: photosystem II core complex proteins psbY, chloroplastic
[Pyrus x bretschneideri]
Length = 199
Score = 70.9 bits (172), Expect = 8e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS
Sbjct: 165 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 199
>ref|XP_008361814.1| PREDICTED: photosystem II core complex proteins psbY,
chloroplastic-like [Malus domestica]
Length = 199
Score = 70.9 bits (172), Expect = 8e-12
Identities = 34/35 (97%), Positives = 34/35 (97%)
Frame = +3
Query: 63 DNRGQLLLFVVAPAILWVAYNILQPALNQINRMRS 167
DNRGQLLLFVVAPAILWV YNILQPALNQINRMRS
Sbjct: 165 DNRGQLLLFVVAPAILWVLYNILQPALNQINRMRS 199