BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia30_contig00000031
         (616 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011089882.1| ribulose bisphosphate carboxylase small chai...   132   3e-35
gb|EYU38175.1| hypothetical protein MIMGU_mgv1a014707mg [Erythra...   130   9e-35
ref|XP_012836597.1| PREDICTED: ribulose bisphosphate carboxylase...   130   1e-34
gb|ABR25937.1| ribulose bisphosphate carboxylase small chain c, ...   125   6e-34
emb|CAD21856.1| putative ribulose 1,5 biphosphate carboxylase sm...   128   6e-34
gb|KDP20120.1| hypothetical protein JCGZ_05889 [Jatropha curcas]      128   6e-34
ref|NP_001295748.1| ribulose bisphosphate carboxylase small chai...   128   6e-34
ref|XP_012842535.1| PREDICTED: ribulose bisphosphate carboxylase...   128   8e-34
ref|XP_012836591.1| PREDICTED: ribulose bisphosphate carboxylase...   128   8e-34
gb|ABR26086.1| ribulose bisphosphate carboxylase small chain c, ...   125   1e-33
gb|PHT56792.1| Ribulose bisphosphate carboxylase small chain 3B,...   124   1e-33
dbj|BAK23964.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   127   2e-33
gb|PHT91378.1| Ribulose bisphosphate carboxylase small chain 3B,...   124   2e-33
pdb|1WDD|S Chain S, Crystal Structure Of Activated Rice Rubisco ...   125   2e-33
emb|CAA59218.1| ribulose-bisphosphate carboxylase [synthetic con...   125   2e-33
pdb|3AXM|S Chain S, Structure Of Rice Rubisco In Complex With 6p...   125   2e-33
gb|KDN74154.1| hypothetical protein DF19_37695 [Streptomyces oli...   125   2e-33
gb|OMP04746.1| hypothetical protein COLO4_09321 [Corchorus olito...   126   4e-33
gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...   126   4e-33
gb|OMP04748.1| hypothetical protein COLO4_09323 [Corchorus olito...   126   4e-33

>ref|XP_011089882.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
           [Sesamum indicum]
          Length = 181

 Score =  132 bits (331), Expect = 3e-35
 Identities = 60/69 (86%), Positives = 62/69 (89%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDAVQVL ELDEAIKAHP+GFIRIIGFDN RQVQ  S
Sbjct: 113 NHRSPGYYDGRYWTMWKLPMFGCTDAVQVLLELDEAIKAHPNGFIRIIGFDNARQVQCTS 172

Query: 434 FIAYKPAKY 408
           FIAYKP  Y
Sbjct: 173 FIAYKPPGY 181


>gb|EYU38175.1| hypothetical protein MIMGU_mgv1a014707mg [Erythranthe guttata]
          Length = 174

 Score =  130 bits (327), Expect = 9e-35
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           H+ SPGYYDGRYWTMWKLPMFGCTDAVQV+NELDEAIKA+P+GFIRIIGF+N++QVQ  S
Sbjct: 106 HNSSPGYYDGRYWTMWKLPMFGCTDAVQVVNELDEAIKAYPEGFIRIIGFNNLKQVQDIS 165

Query: 434 FIAYKPAKY 408
           FIAYKPA Y
Sbjct: 166 FIAYKPAGY 174


>ref|XP_012836597.1| PREDICTED: ribulose bisphosphate carboxylase small chain 2,
           chloroplastic-like [Erythranthe guttata]
 gb|EYU38174.1| hypothetical protein MIMGU_mgv1a014707mg [Erythranthe guttata]
          Length = 181

 Score =  130 bits (327), Expect = 1e-34
 Identities = 58/69 (84%), Positives = 65/69 (94%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           H+ SPGYYDGRYWTMWKLPMFGCTDAVQV+NELDEAIKA+P+GFIRIIGF+N++QVQ  S
Sbjct: 113 HNSSPGYYDGRYWTMWKLPMFGCTDAVQVVNELDEAIKAYPEGFIRIIGFNNLKQVQDIS 172

Query: 434 FIAYKPAKY 408
           FIAYKPA Y
Sbjct: 173 FIAYKPAGY 181


>gb|ABR25937.1| ribulose bisphosphate carboxylase small chain c, partial [Oryza
           sativa Indica Group]
          Length = 85

 Score =  125 bits (314), Expect = 6e-34
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDA QVL EL+EA KA+PD F+RIIGFDNVRQVQ+ S
Sbjct: 11  NHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLIS 70

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 71  FIAYKP 76


>emb|CAD21856.1| putative ribulose 1,5 biphosphate carboxylase small subunit
           percursor [Rumex obtusifolius]
          Length = 181

 Score =  128 bits (322), Expect = 6e-34
 Identities = 57/73 (78%), Positives = 62/73 (84%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HHHSPGYYDGRYWTMWKLPMFGCTDA QV+ EL+EA KA+P  F+RIIGFDNVRQVQ  S
Sbjct: 109 HHHSPGYYDGRYWTMWKLPMFGCTDATQVVAELEEAKKAYPHAFVRIIGFDNVRQVQCVS 168

Query: 434 FIAYKPAKY*GNY 396
           FIAYKP +  G Y
Sbjct: 169 FIAYKPPRAEGTY 181


>gb|KDP20120.1| hypothetical protein JCGZ_05889 [Jatropha curcas]
          Length = 181

 Score =  128 bits (322), Expect = 6e-34
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           ++ SPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHP+GF+RIIGFD+ RQVQ  S
Sbjct: 113 NNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCIS 172

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 173 FIAYKP 178


>ref|NP_001295748.1| ribulose bisphosphate carboxylase small chain, chloroplastic-like
           [Jatropha curcas]
 gb|ADB85091.1| ribulose 1,5-bisphosphate carboxylase small subunit [Jatropha
           curcas]
          Length = 181

 Score =  128 bits (322), Expect = 6e-34
 Identities = 57/66 (86%), Positives = 62/66 (93%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           ++ SPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHP+GF+RIIGFD+ RQVQ  S
Sbjct: 113 NNRSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPNGFVRIIGFDSYRQVQCIS 172

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 173 FIAYKP 178


>ref|XP_012842535.1| PREDICTED: ribulose bisphosphate carboxylase small chain 2,
           chloroplastic-like [Erythranthe guttata]
 gb|EYU45444.1| hypothetical protein MIMGU_mgv1a014737mg [Erythranthe guttata]
          Length = 180

 Score =  128 bits (321), Expect = 8e-34
 Identities = 57/69 (82%), Positives = 65/69 (94%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           ++ SPGYYDGRYWTMWKLPMFGCTDAVQV+NELDEAIKA+P+GFIRIIGF+N++QVQ  S
Sbjct: 112 YNSSPGYYDGRYWTMWKLPMFGCTDAVQVVNELDEAIKAYPEGFIRIIGFNNLKQVQDIS 171

Query: 434 FIAYKPAKY 408
           FIAYKPA Y
Sbjct: 172 FIAYKPAGY 180


>ref|XP_012836591.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic-like [Erythranthe guttata]
 gb|EYU38172.1| hypothetical protein MIMGU_mgv1a014686mg [Erythranthe guttata]
          Length = 181

 Score =  128 bits (321), Expect = 8e-34
 Identities = 57/69 (82%), Positives = 65/69 (94%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           ++ SPGYYDGRYWTMWKLPMFGCTDAVQV+NELDEAIKA+P+GFIRIIGF+N++QVQ  S
Sbjct: 113 YNSSPGYYDGRYWTMWKLPMFGCTDAVQVVNELDEAIKAYPEGFIRIIGFNNLKQVQDIS 172

Query: 434 FIAYKPAKY 408
           FIAYKPA Y
Sbjct: 173 FIAYKPAGY 181


>gb|ABR26086.1| ribulose bisphosphate carboxylase small chain c, partial [Oryza
           sativa Indica Group]
          Length = 103

 Score =  125 bits (314), Expect = 1e-33
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDA QVL EL+EA KA+PD F+RIIGFDNVRQVQ+ S
Sbjct: 29  NHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLIS 88

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 89  FIAYKP 94


>gb|PHT56792.1| Ribulose bisphosphate carboxylase small chain 3B, chloroplastic
           [Capsicum baccatum]
          Length = 89

 Score =  124 bits (312), Expect = 1e-33
 Identities = 55/69 (79%), Positives = 59/69 (85%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HH SPGYYDGRYWTMWKLPMFGCTDA QVLNE+ EA KA+P  ++RIIGFDNVRQVQ  S
Sbjct: 21  HHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWVRIIGFDNVRQVQCVS 80

Query: 434 FIAYKPAKY 408
           FIAYKP  Y
Sbjct: 81  FIAYKPEGY 89


>dbj|BAK23964.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [synthetic construct]
          Length = 170

 Score =  127 bits (318), Expect = 2e-33
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDA QVL EL+EA KA+PD F+RIIGFDNVRQVQ+ S
Sbjct: 101 NHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLIS 160

Query: 434 FIAYKPA 414
           FIAYKPA
Sbjct: 161 FIAYKPA 167


>gb|PHT91378.1| Ribulose bisphosphate carboxylase small chain 3B, chloroplastic
           [Capsicum annuum]
          Length = 89

 Score =  124 bits (311), Expect = 2e-33
 Identities = 55/69 (79%), Positives = 59/69 (85%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HH SPGYYDGRYWTMWKLPMFGCTDA QVLNE+ EA KA+P  ++RIIGFDNVRQVQ  S
Sbjct: 21  HHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWVRIIGFDNVRQVQCFS 80

Query: 434 FIAYKPAKY 408
           FIAYKP  Y
Sbjct: 81  FIAYKPEGY 89


>pdb|1WDD|S Chain S, Crystal Structure Of Activated Rice Rubisco Complexed With
           2- Carboxyarabinitol-1,5-bisphosphate
 pdb|1WDD|W Chain W, Crystal Structure Of Activated Rice Rubisco Complexed With
           2- Carboxyarabinitol-1,5-bisphosphate
          Length = 128

 Score =  125 bits (314), Expect = 2e-33
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDA QVL EL+EA KA+PD F+RIIGFDNVRQVQ+ S
Sbjct: 54  NHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLIS 113

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 114 FIAYKP 119


>emb|CAA59218.1| ribulose-bisphosphate carboxylase [synthetic construct]
 gb|ABA97170.1| Ribulose bisphosphate carboxylase small chain A, chloroplast
           precursor, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 128

 Score =  125 bits (314), Expect = 2e-33
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDA QVL EL+EA KA+PD F+RIIGFDNVRQVQ+ S
Sbjct: 54  NHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLIS 113

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 114 FIAYKP 119


>pdb|3AXM|S Chain S, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|T Chain T, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|U Chain U, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|V Chain V, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|W Chain W, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|X Chain X, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|Y Chain Y, Structure Of Rice Rubisco In Complex With 6pg
 pdb|3AXM|Z Chain Z, Structure Of Rice Rubisco In Complex With 6pg
          Length = 129

 Score =  125 bits (314), Expect = 2e-33
 Identities = 55/66 (83%), Positives = 60/66 (90%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           +H SPGYYDGRYWTMWKLPMFGCTDA QVL EL+EA KA+PD F+RIIGFDNVRQVQ+ S
Sbjct: 55  NHRSPGYYDGRYWTMWKLPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQVQLIS 114

Query: 434 FIAYKP 417
           FIAYKP
Sbjct: 115 FIAYKP 120


>gb|KDN74154.1| hypothetical protein DF19_37695 [Streptomyces olindensis]
          Length = 123

 Score =  125 bits (313), Expect = 2e-33
 Identities = 56/69 (81%), Positives = 59/69 (85%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HH SPGYYDGRYWTMWKLPMFGCTDA QVLNE+ EA KA+P  +IRIIGFDNVRQVQ  S
Sbjct: 55  HHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQVQCIS 114

Query: 434 FIAYKPAKY 408
           FIAYKP  Y
Sbjct: 115 FIAYKPEGY 123


>gb|OMP04746.1| hypothetical protein COLO4_09321 [Corchorus olitorius]
          Length = 183

 Score =  126 bits (317), Expect = 4e-33
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HHHSPGYYDGRYWTMWKLPMFGCTD+ QVL EL+EA KA+PD FIRIIGFDN RQVQ  S
Sbjct: 112 HHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCIS 171

Query: 434 FIAYKPAKY 408
           FIAYKP  +
Sbjct: 172 FIAYKPPSF 180


>gb|ABS72189.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1A
           [Corchorus olitorius]
 gb|OMP04747.1| hypothetical protein COLO4_09322 [Corchorus olitorius]
          Length = 183

 Score =  126 bits (317), Expect = 4e-33
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HHHSPGYYDGRYWTMWKLPMFGCTD+ QVL EL+EA KA+PD FIRIIGFDN RQVQ  S
Sbjct: 112 HHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCIS 171

Query: 434 FIAYKPAKY 408
           FIAYKP  +
Sbjct: 172 FIAYKPPSF 180


>gb|OMP04748.1| hypothetical protein COLO4_09323 [Corchorus olitorius]
          Length = 185

 Score =  126 bits (317), Expect = 4e-33
 Identities = 56/69 (81%), Positives = 60/69 (86%)
 Frame = -3

Query: 614 HHHSPGYYDGRYWTMWKLPMFGCTDAVQVLNELDEAIKAHPDGFIRIIGFDNVRQVQICS 435
           HHHSPGYYDGRYWTMWKLPMFGCTD+ QVL EL+EA KA+PD FIRIIGFDN RQVQ  S
Sbjct: 114 HHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQVQCIS 173

Query: 434 FIAYKPAKY 408
           FIAYKP  +
Sbjct: 174 FIAYKPPSF 182