BLASTX nr result

ID: Rehmannia29_contig00039246 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00039246
         (884 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006576518.1| replication protein 1a [Amazon lily mild mot...   502   e-169
ref|YP_009104374.1| putative replicase [Cassava Ivorian bacillif...   455   e-151
gb|AHG25371.2| replicase [Pelargonium zonate spot virus]              372   e-118
gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus]             371   e-118
ref|NP_619770.1| replicase [Pelargonium zonate spot virus] >gi|8...   362   e-115
ref|YP_002640500.1| 1a protein [Gayfeather mild mottle virus] >g...   282   2e-84
gb|AAR89468.1| 1a protein [Peanut stunt virus]                        279   3e-83
emb|CAC86463.1| 1a protein [Tomato aspermy virus]                     275   7e-82
gb|AHA10984.1| 1a protein [Tomato aspermy virus]                      275   7e-82
emb|CAP19049.1| 1a protein [Peanut stunt virus]                       275   7e-82
ref|NP_620760.1| 1a protein [Tomato aspermy virus] >gi|137257|sp...   274   3e-81
dbj|BAF80085.1| 1a protein [Peanut stunt virus]                       274   3e-81
gb|AOO95042.1| 1a protein [Tomato aspermy virus]                      273   4e-81
gb|AFG28425.1| 1a protein [Peanut stunt virus]                        272   1e-80
gb|ADN83830.1| 1a protein [Peanut stunt virus]                        272   1e-80
gb|ACF34993.1| 1a protein [Peanut stunt virus]                        272   2e-80
gb|AMX23554.1| 1a protein [Cucumber mosaic virus]                     271   3e-80
ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus] >...   270   4e-80
sp|P28726.1|1A_PSVJ RecName: Full=Replication protein 1a; Includ...   271   4e-80
ref|YP_233101.2| 1a protein [Cassia yellow blotch virus] >gi|513...   270   6e-80

>ref|YP_006576518.1| replication protein 1a [Amazon lily mild mottle virus]
 dbj|BAM34543.1| replication protein 1a [Amazon lily mild mottle virus]
          Length = 945

 Score =  502 bits (1293), Expect = e-169
 Identities = 239/280 (85%), Positives = 257/280 (91%)
 Frame = +3

Query: 45  MAFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKI 224
           MAFSFNVRDLVDAEG+QAIGV+ALVDSLATQ+A DQIEYSKR+ +VFIRQQLSV EGEKI
Sbjct: 1   MAFSFNVRDLVDAEGAQAIGVRALVDSLATQIAHDQIEYSKRSNKVFIRQQLSVAEGEKI 60

Query: 225 RKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGEILDFGGSWLFHWKRGSQV 404
           RKRFGGAYEL+LTQEFTAPHSFAAALR CETLECLDFFP+GEILDFGGSWLFHWKRG  V
Sbjct: 61  RKRFGGAYELQLTQEFTAPHSFAAALRTCETLECLDFFPDGEILDFGGSWLFHWKRGKPV 120

Query: 405 HSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAISIH 584
           HSCCPILDARDAAR QERLVHMEK+VR+SS  Y +LPGPNFC  +AE+C VQCPYAI IH
Sbjct: 121 HSCCPILDARDAARQQERLVHMEKLVRKSSKTYADLPGPNFCDQRAEECSVQCPYAICIH 180

Query: 585 GGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNGIVAFDFRD 764
           GGYDMGFQTLC+AMHKHGCVMLRGTMMFD+EMLLY+ GFI DLNCVWS R   +AFDFRD
Sbjct: 181 GGYDMGFQTLCAAMHKHGCVMLRGTMMFDAEMLLYKDGFIPDLNCVWSIRGDKIAFDFRD 240

Query: 765 ESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
           ESTLSY HSFKNVKSFLTDQ+HVIGTTAYILERC I+ GI
Sbjct: 241 ESTLSYCHSFKNVKSFLTDQAHVIGTTAYILERCVIDMGI 280


>ref|YP_009104374.1| putative replicase [Cassava Ivorian bacilliform virus]
 gb|AHJ89005.1| putative replicase [Cassava Ivorian bacilliform virus]
          Length = 943

 Score =  455 bits (1171), Expect = e-151
 Identities = 208/280 (74%), Positives = 249/280 (88%)
 Frame = +3

Query: 45  MAFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKI 224
           MAFSFNVRDLVDAEGSQA+GV+ALVDSLAT++A+DQIEY KR+++V++RQ L+VQEGEKI
Sbjct: 1   MAFSFNVRDLVDAEGSQALGVRALVDSLATKLAEDQIEYQKRSQKVYVRQMLTVQEGEKI 60

Query: 225 RKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGEILDFGGSWLFHWKRGSQV 404
           RKRFGGA++L LTQEF APHSFAAALR CETLECLDFFP+G++LDFGGSWLFHW+RG QV
Sbjct: 61  RKRFGGAFDLALTQEFVAPHSFAAALRTCETLECLDFFPQGQVLDFGGSWLFHWQRGHQV 120

Query: 405 HSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAISIH 584
           HSCCP+LD RDA RHQER+VHM+K+V +  SK+  LP  +FC L+AE+C+VQCPYAI IH
Sbjct: 121 HSCCPVLDIRDACRHQERIVHMQKLVLKRPSKFEALPAADFCTLRAEECKVQCPYAICIH 180

Query: 585 GGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNGIVAFDFRD 764
           G YDMGF+T+C AM++HG V+LRGTMMFDSEMLLY+ GF++DLNCVWS     ++FDFRD
Sbjct: 181 GAYDMGFETMCKAMNRHGTVLLRGTMMFDSEMLLYKEGFMADLNCVWSISGDRISFDFRD 240

Query: 765 ESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
           ESTLSYTHSFKNVKSFLTDQ+ V    AY+LERC+IE+GI
Sbjct: 241 ESTLSYTHSFKNVKSFLTDQAFVYNNVAYLLERCSIEYGI 280


>gb|AHG25371.2| replicase [Pelargonium zonate spot virus]
          Length = 983

 Score =  372 bits (954), Expect = e-118
 Identities = 176/292 (60%), Positives = 220/292 (75%), Gaps = 13/292 (4%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A SFNVRDL+++ G+ A+GVK LVD+ AT+ A++Q EY KR+K+V++RQ LS  +GEK++
Sbjct: 3   ATSFNVRDLINSNGADAMGVKGLVDAHATKAAEEQFEYIKRSKKVWVRQILSASDGEKMQ 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE-ILDFGGSWLFHWKRGSQV 404
           KRFGG ++L+L+QEF APHSFA A+RQCETLECL  FPE   ILDFGGSWLFHW+R   V
Sbjct: 63  KRFGGTFDLQLSQEFIAPHSFAGAMRQCETLECLSSFPEDSLILDFGGSWLFHWQRQHNV 122

Query: 405 HSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAISIH 584
           HSCCP+LDARD ARHQER++ M+K V    SK+     P+FC LKAEDCEV+ PYAISIH
Sbjct: 123 HSCCPVLDARDMARHQERMISMQKCVAHRPSKFEAFESPDFCLLKAEDCEVRSPYAISIH 182

Query: 585 GGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG-------- 740
           G YDMGF+ LC AMH HG +MLRGTMMFD+ ML+++ G + DLNC W+K  G        
Sbjct: 183 GAYDMGFEGLCKAMHSHGTIMLRGTMMFDANMLVFDEGVMEDLNCRWTKEKGDPFGLRGA 242

Query: 741 ----IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
                V FDF DESTLSY+HS+KN+KSFLT+  + I    Y+LERC I +GI
Sbjct: 243 PCEDTVHFDFVDESTLSYSHSWKNIKSFLTEGGYQIENVQYVLERCVISYGI 294


>gb|AFU72534.1| 1a protein [Pelargonium zonate spot virus]
          Length = 962

 Score =  371 bits (952), Expect = e-118
 Identities = 175/292 (59%), Positives = 220/292 (75%), Gaps = 13/292 (4%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A SFNVRDL+++ G+ A+GVK LVD+ AT+ A++Q EY KR+K+V++RQ LS  +GEK++
Sbjct: 3   ATSFNVRDLINSNGADAMGVKGLVDAHATKAAEEQFEYIKRSKKVWVRQILSASDGEKMQ 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE-ILDFGGSWLFHWKRGSQV 404
           KRFGG ++L+L+QEF APHSFA A+RQCETLECL  FPE   ILDFGGSWLFHW+R   V
Sbjct: 63  KRFGGTFDLQLSQEFIAPHSFAGAMRQCETLECLSSFPEDSLILDFGGSWLFHWQRQHNV 122

Query: 405 HSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAISIH 584
           HSCCP+LDARD ARHQER++ M+K V     K+     P+FC LKAEDCEV+ PYAISIH
Sbjct: 123 HSCCPVLDARDMARHQERMISMQKCVAHRPGKFEAFESPDFCLLKAEDCEVRSPYAISIH 182

Query: 585 GGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG-------- 740
           G YDMGF+ LC AMH HG +MLRGTMMFD+ ML+++ G + DLNC W+K  G        
Sbjct: 183 GAYDMGFEGLCKAMHSHGTIMLRGTMMFDANMLVFDEGVMEDLNCRWTKEKGDPFGLRGA 242

Query: 741 ----IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
               +V FDF DESTLSY+HS+KN+KSFLT+  + I    Y+LERC I +GI
Sbjct: 243 PCEDMVHFDFIDESTLSYSHSWKNIKSFLTEGGYQIENVQYVLERCVISYGI 294


>ref|NP_619770.1| replicase [Pelargonium zonate spot virus]
 sp|Q9DUT3.1|1A_PZSVT RecName: Full=Replication protein 1a; Includes: RecName:
           Full=ATP-dependent helicase; Includes: RecName:
           Full=Methyltransferase
 emb|CAC08526.1| unnamed protein product [Pelargonium zonate spot virus]
          Length = 962

 Score =  362 bits (930), Expect = e-115
 Identities = 172/292 (58%), Positives = 217/292 (74%), Gaps = 13/292 (4%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A SFNVRDL+++ G+ A+GV+ LVD+ AT+ A++Q EY KR+K+V++RQ LS  +GEK++
Sbjct: 3   ATSFNVRDLINSNGADAMGVRGLVDAHATKAAEEQFEYIKRSKKVWVRQILSASDGEKMQ 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFPEGE-ILDFGGSWLFHWKRGSQV 404
           KRFGG ++L+L++    PHSFA A+RQCETLECL  FPE   ILDFGGSWLFHW+R   V
Sbjct: 63  KRFGGTFDLQLSKNL-CPHSFAGAMRQCETLECLSSFPEDSLILDFGGSWLFHWQRQHNV 121

Query: 405 HSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAISIH 584
           HSCCP+LDARD ARHQER++ M+K V     K+     P+FC LKAEDCEVQ PYAISIH
Sbjct: 122 HSCCPVLDARDMARHQERMISMQKCVAHRPGKFESFESPDFCLLKAEDCEVQSPYAISIH 181

Query: 585 GGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG-------- 740
           G YDMGF+ LC AMH HG +MLRGTMMFD+ ML++  G + DLNC W+K  G        
Sbjct: 182 GAYDMGFEGLCKAMHSHGTIMLRGTMMFDANMLVFNEGVMEDLNCRWTKEKGDPYGLRGA 241

Query: 741 ----IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
               +V FDF DESTLSY+HS+KN+KSFLT+  + IG   Y+LERC I +GI
Sbjct: 242 PCEDMVHFDFIDESTLSYSHSWKNIKSFLTEGGYQIGNVQYVLERCVISYGI 293


>ref|YP_002640500.1| 1a protein [Gayfeather mild mottle virus]
 emb|CAT02556.1| 1a protein [Gayfeather mild mottle virus]
          Length = 988

 Score =  282 bits (722), Expect = 2e-84
 Identities = 145/309 (46%), Positives = 188/309 (60%), Gaps = 32/309 (10%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           +FN+ +LV + G + +   ALVD +A +  ++Q+++ +R ++V+IR  L V++ E IR R
Sbjct: 5   AFNINNLVASNGDKGLMANALVDKIAHEQLEEQLQHQRRGRKVYIRNVLDVKDSEIIRSR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L LTQ+  APH  A ALR CETL+CLDFFP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLTQQEQAPHGLAGALRLCETLDCLDFFPNSGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+ M K +     K+ E   PNFC   A DC+V+  +AIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLMTMRKAILNDPQKF-EGRQPNFCTSPAADCDVKAHFAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSK--------- 731
           IHGGYDMGFQ LC AMH HG  +L+GTMMFD  ML    GFI DL C W K         
Sbjct: 184 IHGGYDMGFQGLCQAMHAHGTTILKGTMMFDGAMLFDTEGFIPDLKCKWKKIKPFTFEKE 243

Query: 732 ------------------RNGIVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYIL 857
                              N ++AFDF DESTLSY H ++NVKSFLTDQ++      Y +
Sbjct: 244 DQTSKVGKLNSVVFSAARVNTLIAFDFVDESTLSYVHEWENVKSFLTDQTYHYKGMTYGI 303

Query: 858 ERCTIEFGI 884
           ERC I+ GI
Sbjct: 304 ERCLIQNGI 312


>gb|AAR89468.1| 1a protein [Peanut stunt virus]
          Length = 1004

 Score =  279 bits (714), Expect = 3e-83
 Identities = 143/305 (46%), Positives = 187/305 (61%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ DLV A GS  +   ALVD +A++  ++Q+ + +R  +V+IR +L ++E E IR R
Sbjct: 5   SFNLPDLVAANGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDIKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDSFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL++M K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLNMRKAILNDPQTF-EGRQPNFCTNTAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG   L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFEGLCRAMNAHGTTFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H ++N+KSFLTDQ++  G   Y +ERC 
Sbjct: 244 NASAFSSKLNLSIGGRTLIAFDFENESTMSYVHEWRNIKSFLTDQTYSYGGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>emb|CAC86463.1| 1a protein [Tomato aspermy virus]
          Length = 993

 Score =  275 bits (704), Expect = 7e-82
 Identities = 143/311 (45%), Positives = 187/311 (60%), Gaps = 32/311 (10%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A +FN+  LV + G + +   ALVD LA +  ++Q+++ +R  +V+IR  L V++ E IR
Sbjct: 3   ASAFNIHKLVASHGDKGLLASALVDKLAHEQLEEQVQHQRRGLKVYIRNALDVKDSEIIR 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKR 392
            R+GG Y+L LTQ+  APH  A ALR CE L+CLD FP     +  +LDFGGSW+ H+ R
Sbjct: 63  DRYGGKYDLHLTQQEQAPHGLAGALRLCELLDCLDSFPRTGLRQDLVLDFGGSWVTHYLR 122

Query: 393 GSQVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYA 572
           G  VH C P L  RD  RH ERL+ M K++      + E   P+FC L AEDC+VQ  +A
Sbjct: 123 GHNVHCCSPCLGIRDKMRHTERLMTMRKVIVNDPDTF-ESRVPDFCTLPAEDCKVQAHFA 181

Query: 573 ISIHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSK------- 731
           ISIHGGYDMGF+ LC AMH HG   L+GTMMFD  ML    G+++DL C W K       
Sbjct: 182 ISIHGGYDMGFKGLCRAMHAHGTTFLKGTMMFDGAMLFDTEGYLADLKCKWKKIKPRTYE 241

Query: 732 --------------------RNGIVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAY 851
                                + ++AFDF DESTLSY H ++NVKSFLTDQ++      Y
Sbjct: 242 SEDQTPLLSRISDNLTTTIKDHTLIAFDFVDESTLSYVHKWENVKSFLTDQTYSYKGMTY 301

Query: 852 ILERCTIEFGI 884
            LERC I+ GI
Sbjct: 302 GLERCLIQHGI 312


>gb|AHA10984.1| 1a protein [Tomato aspermy virus]
          Length = 993

 Score =  275 bits (704), Expect = 7e-82
 Identities = 143/311 (45%), Positives = 187/311 (60%), Gaps = 32/311 (10%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A +FN+  LV + G + +   ALVD LA +  ++Q+++ +R  +V+IR  L V++ E IR
Sbjct: 3   ASAFNIHKLVASHGDKGLLASALVDKLAHEQLEEQVQHQRRGLKVYIRNALDVKDSEIIR 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKR 392
            R+GG Y+L LTQ+  APH  A ALR CE L+CLD FP     +  +LDFGGSW+ H+ R
Sbjct: 63  DRYGGKYDLHLTQQEQAPHGLAGALRLCELLDCLDSFPRTGLRQDLVLDFGGSWVTHYLR 122

Query: 393 GSQVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYA 572
           G  VH C P L  RD  RH ERL+ M K++      + E   P+FC L AEDC+VQ  +A
Sbjct: 123 GHNVHCCSPCLGIRDKMRHTERLMTMRKVIVNDPDTF-ESRVPDFCTLPAEDCKVQAHFA 181

Query: 573 ISIHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSK------- 731
           ISIHGGYDMGF+ LC AMH HG   L+GTMMFD  ML    G+++DL C W K       
Sbjct: 182 ISIHGGYDMGFKGLCRAMHAHGTTFLKGTMMFDGAMLFDTEGYLADLKCKWKKIKPRTYE 241

Query: 732 --------------------RNGIVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAY 851
                                + ++AFDF DESTLSY H ++NVKSFLTDQ++      Y
Sbjct: 242 SEDQTPLLSRISDNLTTTIKDHTLIAFDFVDESTLSYVHKWENVKSFLTDQTYSYKGMTY 301

Query: 852 ILERCTIEFGI 884
            LERC I+ GI
Sbjct: 302 GLERCLIQHGI 312


>emb|CAP19049.1| 1a protein [Peanut stunt virus]
          Length = 997

 Score =  275 bits (704), Expect = 7e-82
 Identities = 142/305 (46%), Positives = 183/305 (60%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ +LV   GS  +   ALVD +A +  ++Q+ + +R  +V+IR +L V+E E IR R
Sbjct: 5   SFNLSELVATRGSSGLVASALVDKVAAEQLEEQLHHQRRGLKVYIRNRLDVKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+ M K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLSMRKAILNDPQNF-EGRQPNFCTNPAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG + L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFEGLCRAMNAHGTIFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H +KN+KSFLTDQ+       Y +ERC 
Sbjct: 244 NASSLSSKLNLVVSGKTLIAFDFENESTMSYVHEWKNIKSFLTDQTFSYNGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>ref|NP_620760.1| 1a protein [Tomato aspermy virus]
 sp|P28931.1|1A_TAV RecName: Full=Replication protein 1a; Includes: RecName:
           Full=ATP-dependent helicase; Includes: RecName:
           Full=Methyltransferase
 dbj|BAA00936.1| ORF [Tomato aspermy virus]
          Length = 993

 Score =  274 bits (700), Expect = 3e-81
 Identities = 142/311 (45%), Positives = 186/311 (59%), Gaps = 32/311 (10%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A +FN+  LV + G + +   ALVD LA +  ++Q+++ +R  +V+IR  L V++ E IR
Sbjct: 3   ASAFNIHKLVASHGDKGLLASALVDKLAHEQLEEQVQHQRRGLKVYIRNALDVKDSEIIR 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKR 392
            R+GG Y+L LTQ+  APH  A ALR CE L+CLD FP     +  +LDFGGSW+ H+ R
Sbjct: 63  DRYGGKYDLHLTQQEQAPHGLAGALRLCELLDCLDSFPRTGLRQDLVLDFGGSWVTHYLR 122

Query: 393 GSQVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYA 572
           G  VH C P L  RD  RH ERL+ M K++      + E   P+FC L AEDC+VQ  + 
Sbjct: 123 GHNVHCCSPCLGIRDKMRHTERLMTMRKVIVNDPDTF-ESRVPDFCTLPAEDCKVQAHFV 181

Query: 573 ISIHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSK------- 731
           ISIHGGYDMGF+ LC AMH HG   L+GTMMFD  ML    G+++DL C W K       
Sbjct: 182 ISIHGGYDMGFKGLCRAMHAHGTTFLKGTMMFDGAMLFDTEGYLADLKCKWKKIKPRTYE 241

Query: 732 --------------------RNGIVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAY 851
                                + ++AFDF DESTLSY H ++NVKSFLTDQ++      Y
Sbjct: 242 SEDQTPLLSRISDNLTTTIKDHTLIAFDFVDESTLSYVHKWENVKSFLTDQTYSYKGMTY 301

Query: 852 ILERCTIEFGI 884
            LERC I+ GI
Sbjct: 302 GLERCLIQHGI 312


>dbj|BAF80085.1| 1a protein [Peanut stunt virus]
          Length = 1005

 Score =  274 bits (700), Expect = 3e-81
 Identities = 142/305 (46%), Positives = 184/305 (60%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ +LV + GS  +   ALVD +A++  ++Q+ + +R  +V+IR +L V+E E IR R
Sbjct: 5   SFNLNELVASHGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDVKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+ M K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLSMRKAIINDPQTF-EGRQPNFCTNPAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG   L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFEGLCRAMNAHGTTFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H +KN+KSFLTDQ+       Y +ERC 
Sbjct: 244 NASTFTSKLNLAVSGKTLIAFDFENESTMSYIHEWKNIKSFLTDQTFSYNGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>gb|AOO95042.1| 1a protein [Tomato aspermy virus]
          Length = 993

 Score =  273 bits (699), Expect = 4e-81
 Identities = 142/311 (45%), Positives = 187/311 (60%), Gaps = 32/311 (10%)
 Frame = +3

Query: 48  AFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIR 227
           A +FN+  LV + G + +   ALVD LA +  ++Q+++ +R  +V+IR  L V++ E IR
Sbjct: 3   ASAFNIHKLVASHGDKGLLASALVDKLAHEQLEEQVQHQRRGLKVYIRNALDVKDSEIIR 62

Query: 228 KRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKR 392
            R+GG ++L LTQ+  APH  A ALR CE L+CLD FP     +  +LDFGGSW+ H+ R
Sbjct: 63  DRYGGKHDLHLTQQEQAPHGLAGALRLCELLDCLDSFPRTGLRQDLVLDFGGSWVTHYLR 122

Query: 393 GSQVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYA 572
           G  VH C P L  RD  RH ERL+ M K++      + E   P+FC L AEDC+VQ  +A
Sbjct: 123 GHNVHCCSPCLGIRDKMRHTERLMTMRKVIVNDPDTF-ESRVPDFCTLPAEDCKVQAHFA 181

Query: 573 ISIHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSK------- 731
           ISIHGGYDMGF+ LC AMH HG   L+GTMMFD  ML    G+++DL C W K       
Sbjct: 182 ISIHGGYDMGFKGLCRAMHAHGTTFLKGTMMFDGAMLFDTEGYLADLKCKWKKIKPRTYE 241

Query: 732 --------------------RNGIVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAY 851
                                + ++AFDF DESTLSY H ++NVKSFLTDQ++      Y
Sbjct: 242 SEDQTPLLSRISDNLTTTIKDHTLIAFDFVDESTLSYVHKWENVKSFLTDQAYSYKGMTY 301

Query: 852 ILERCTIEFGI 884
            LERC I+ GI
Sbjct: 302 GLERCLIQHGI 312


>gb|AFG28425.1| 1a protein [Peanut stunt virus]
          Length = 1005

 Score =  272 bits (696), Expect = 1e-80
 Identities = 141/305 (46%), Positives = 183/305 (60%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ +LV + GS  +   ALVD +A++  ++Q+ + +R  +V+IR +L V+E E IR R
Sbjct: 5   SFNLNELVASHGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDVKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+   K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLSQRKAIINDPQTF-ENRQPNFCTNPAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG   L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFEGLCRAMNAHGTTFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H +KN+KSFLTDQ+       Y +ERC 
Sbjct: 244 NASTFTSKLNLAVSGKTLIAFDFENESTMSYIHEWKNIKSFLTDQTFSYNGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>gb|ADN83830.1| 1a protein [Peanut stunt virus]
          Length = 1005

 Score =  272 bits (696), Expect = 1e-80
 Identities = 141/305 (46%), Positives = 183/305 (60%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ +LV + GS  +   ALVD +A++  ++Q+ + +R  +V+IR +L V+E E IR R
Sbjct: 5   SFNLNELVASHGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDVKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+   K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLSQRKAIINDPQTF-ENRQPNFCTNPAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG   L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFEGLCRAMNAHGTTFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H +KN+KSFLTDQ+       Y +ERC 
Sbjct: 244 NASTFTSKLNLAVSGKTLIAFDFENESTMSYIHEWKNIKSFLTDQTFSYNGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>gb|ACF34993.1| 1a protein [Peanut stunt virus]
          Length = 1005

 Score =  272 bits (695), Expect = 2e-80
 Identities = 141/305 (46%), Positives = 184/305 (60%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ +LV + GS  +   ALVD +A++  ++Q+ + +R  +V+IR +L V+E E IR R
Sbjct: 5   SFNLNELVASHGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDVKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+ M K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLSMRKAIINDPQTF-EGRQPNFCTNPAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG   L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFKGLCRAMNAHGTTFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H ++N+KSFLTDQ+       Y +ERC 
Sbjct: 244 NASAFTSKLNLAISGKTLIAFDFENESTMSYIHEWENIKSFLTDQTFSYNGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>gb|AMX23554.1| 1a protein [Cucumber mosaic virus]
          Length = 990

 Score =  271 bits (693), Expect = 3e-80
 Identities = 137/307 (44%), Positives = 188/307 (61%), Gaps = 30/307 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           SFN+ +LV + G + +   ALVD  A +  ++Q+++ +R ++V+IR  LSV++ E IR R
Sbjct: 5   SFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGRKVYIRNVLSVKDSEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L LTQ+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGLRQDPVLDFGGSWVTHYLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL++M K++     ++ +   P+FC   A DC+V   +AIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLMNMRKIILNDPQQF-DGRQPDFCTHPAADCDVPAHFAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG  +L+GTMMFD  M+  + G I +LNC W K         
Sbjct: 184 IHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQGIIPELNCQWRKIRSAFSETE 243

Query: 741 -------------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILER 863
                              +VAFDF +EST+SY H +KN+KSF+TDQ++      Y +ER
Sbjct: 244 DVTSLSGKIASTRVRKFKTMVAFDFINESTMSYVHDWKNIKSFMTDQTYSYKGMTYGIER 303

Query: 864 CTIEFGI 884
           CTI  GI
Sbjct: 304 CTINAGI 310


>ref|YP_003208107.1| 1a protein [Melandrium yellow fleck virus]
 dbj|BAI40161.1| 1a protein [Melandrium yellow fleck virus]
          Length = 948

 Score =  270 bits (690), Expect = 4e-80
 Identities = 137/278 (49%), Positives = 183/278 (65%), Gaps = 6/278 (2%)
 Frame = +3

Query: 69  DLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKRFGGAY 248
           +L+   GS++ GV+ +VD  AT+   +Q+E+ KR+K++ +R +LS QE +  R R+GGAY
Sbjct: 5   NLIAERGSKSHGVEMVVDDQATKQVLEQVEHLKRSKRITVRNKLSPQEADAFRARYGGAY 64

Query: 249 ELKLTQEFTAPHSFAAALRQCETLECLDFFP-EGEILDFGGSWLFHWKRGS-QVHSCCPI 422
           ELKLTQE+ APHS A ALR  E  +CL  FP E  ++DFGGSW  H+ R   +VHSCCPI
Sbjct: 65  ELKLTQEYEAPHSLAGALRIAEHYDCLGQFPLEDPVIDFGGSWWHHYSREDYRVHSCCPI 124

Query: 423 LDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAISIHGGYDMG 602
           L  RDA RH+ERL  M K++            P+FC  KAEDC+VQ  +AI IHGGYDMG
Sbjct: 125 LGVRDATRHEERLCRMRKLLEVKDFS----QAPDFCLNKAEDCKVQADWAICIHGGYDMG 180

Query: 603 FQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG----IVAFDFRDES 770
           F+ LC AM+ HG  +LRGT+MFD  ML    G I  LNC W +       ++ FDF +ES
Sbjct: 181 FKNLCKAMNSHGVRILRGTIMFDGAMLFDRQGTIPLLNCRWMREGSGSSEVIKFDFVNES 240

Query: 771 TLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
           TLSY H+++N+ SFLT+    +G+T Y+LER  +  GI
Sbjct: 241 TLSYVHNWRNLGSFLTESVCCVGSTTYLLEREVLRCGI 278


>sp|P28726.1|1A_PSVJ RecName: Full=Replication protein 1a; Includes: RecName:
           Full=ATP-dependent helicase; Includes: RecName:
           Full=Methyltransferase
 dbj|BAA01900.1| 1a protein [Peanut stunt virus]
          Length = 1005

 Score =  271 bits (692), Expect = 4e-80
 Identities = 141/305 (46%), Positives = 183/305 (60%), Gaps = 28/305 (9%)
 Frame = +3

Query: 54  SFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKIRKR 233
           S N+ +LV + GS  +   ALVD +A++  ++Q+ + +R  +V+IR +L V+E E IR R
Sbjct: 5   SSNLNELVASHGSSGLIASALVDKVASEQLEEQLNHQRRGLKVYIRNRLDVKESEVIRNR 64

Query: 234 FGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-----EGEILDFGGSWLFHWKRGS 398
           +GG Y+L L+Q+  APH  A ALR CETL+CLD FP     +  +LDFGGSW+ H+ RG 
Sbjct: 65  YGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGLRQDLVLDFGGSWVTHFLRGH 124

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
            VH C P L  RD  RH ERL+ M K +      + E   PNFC   AE C+VQ  YAIS
Sbjct: 125 NVHCCSPCLGVRDKMRHTERLLSMRKAIINDPQTF-EGRQPNFCTNPAEKCDVQAHYAIS 183

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNG------ 740
           IHGGYDMGF+ LC AM+ HG   L+GTMMFD  ML  +SGFI +L C W K         
Sbjct: 184 IHGGYDMGFEGLCRAMNAHGTTFLKGTMMFDGAMLFDDSGFIPELKCHWRKIKNAFSEKE 243

Query: 741 -----------------IVAFDFRDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCT 869
                            ++AFDF +EST+SY H +KN+KSFLTDQ+       Y +ERC 
Sbjct: 244 NASTFTSKLNLAVSGKTLIAFDFENESTMSYIHEWKNIKSFLTDQTFSYNGYTYGIERCV 303

Query: 870 IEFGI 884
           I  GI
Sbjct: 304 IYAGI 308


>ref|YP_233101.2| 1a protein [Cassia yellow blotch virus]
 dbj|BAD98316.2| 1a protein [Cassia yellow blotch virus]
          Length = 955

 Score =  270 bits (689), Expect = 6e-80
 Identities = 137/282 (48%), Positives = 187/282 (66%), Gaps = 2/282 (0%)
 Frame = +3

Query: 45  MAFSFNVRDLVDAEGSQAIGVKALVDSLATQMAQDQIEYSKRAKQVFIRQQLSVQEGEKI 224
           MA   ++  L+  +G+++ GV  +VD+ ATQ    Q+E+ +R+K++ IR +L+  E E  
Sbjct: 1   MASLIDLNSLISKKGAESRGVLDIVDNQATQQVLSQVEHLRRSKKINIRNKLAPSEVEAF 60

Query: 225 RKRFGGAYELKLTQEFTAPHSFAAALRQCETLECLDFFP-EGEILDFGGSWLFHWKRGS- 398
           + R+GGA++L LTQE+ APHS A ALR  E  +C+D FP E  I+DFGGSW  H+ R   
Sbjct: 61  KARYGGAFDLNLTQEYNAPHSLAGALRIAEHYDCMDSFPPEDRIIDFGGSWWHHYARKDF 120

Query: 399 QVHSCCPILDARDAARHQERLVHMEKMVRRSSSKYCELPGPNFCCLKAEDCEVQCPYAIS 578
           +VH CCPIL  RDAARH+ER+  + ++++  SS Y E P  +FC  KA DC VQ  +AI 
Sbjct: 121 RVHCCCPILGVRDAARHEERMCRLRRLLQ--SSDYEETP--DFCLNKARDCNVQADWAIC 176

Query: 579 IHGGYDMGFQTLCSAMHKHGCVMLRGTMMFDSEMLLYESGFISDLNCVWSKRNGIVAFDF 758
           IHGGYDMGF+ LC +M  HG  +L+GT+MFD  ML  ESGF+  L C W K  G V FDF
Sbjct: 177 IHGGYDMGFKDLCHSMRSHGVRILKGTIMFDGAMLFDESGFLPLLKCRWKKEKGFVKFDF 236

Query: 759 RDESTLSYTHSFKNVKSFLTDQSHVIGTTAYILERCTIEFGI 884
            +ESTLSY HS+  + SF T+  + IG+T Y+LER  I+  I
Sbjct: 237 ENESTLSYIHSWDKLGSFFTESVYRIGSTTYLLERELIKCNI 278


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