BLASTX nr result
ID: Rehmannia29_contig00039245
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00039245
(412 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ... 73 2e-12
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ... 68 2e-10
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 66 8e-10
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus] 66 9e-10
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m... 66 9e-10
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m... 66 9e-10
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m... 66 9e-10
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 66 9e-10
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 66 9e-10
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 65 2e-09
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 64 3e-09
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m... 64 6e-09
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|... 60 7e-08
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m... 60 9e-08
>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 73.2 bits (178), Expect = 2e-12
Identities = 32/38 (84%), Positives = 36/38 (94%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VEDK+TTL DFKE L+DKFDREIFTEAHGHTNCVQG++
Sbjct: 946 VEDKSTTLDDFKEGLNDKFDREIFTEAHGHTNCVQGND 983
>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 67.8 bits (164), Expect = 2e-10
Identities = 30/39 (76%), Positives = 33/39 (84%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDET 243
VE ++TTL DFKE L DKFDREIF EAHGHTNCVQ D+T
Sbjct: 946 VEGRSTTLDDFKEELDDKFDREIFNEAHGHTNCVQTDDT 984
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 65.9 bits (159), Expect = 8e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 270 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 324
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF AHGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDD 976
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF AHGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDD 976
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF AHGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDD 976
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF AHGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDD 976
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF AHGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDD 976
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF AHGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQTDD 976
>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 993
>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 993
>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 993
>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 993
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 993
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 65.9 bits (159), Expect = 9e-10
Identities = 34/55 (61%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHGHTNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQTDNPTTQLFAHQQAKDEALL 993
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 65.1 bits (157), Expect = 2e-09
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VE+ TT L DF+E L DKFDREIFTEAHGHTNCVQ D+
Sbjct: 927 VEECTTALDDFREELHDKFDREIFTEAHGHTNCVQTDD 964
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 64.3 bits (155), Expect = 3e-09
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VED TTTL DFKE L DKFDREIF HGHTNCVQ D+
Sbjct: 939 VEDGTTTLDDFKEELHDKFDREIFNPTHGHTNCVQTDD 976
>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 63.5 bits (153), Expect = 6e-09
Identities = 33/55 (60%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALL 198
VED TTTL DF+E L DKFDREIF +AHG+TNCVQ D T ++ A + + ALL
Sbjct: 939 VEDGTTTLDDFREELQDKFDREIFNQAHGYTNCVQTDNPTTQLFAHQQAKDEALL 993
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase
emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
Length = 1385
Score = 60.5 bits (145), Expect = 7e-08
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE-TWKVMAARASVVGALLRAMV 186
VE+ TTL DFKE L DKFDREIFT GHTNCVQ D+ T ++ + + + ALL M+
Sbjct: 944 VEEPATTLDDFKEELRDKFDREIFTSDRGHTNCVQTDDPTTQLFSHQQAKDEALLWEMI 1002
>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1388
Score = 60.1 bits (144), Expect = 9e-08
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -3
Query: 359 VEDKTTTLGDFKESLSDKFDREIFTEAHGHTNCVQGDE 246
VE+ TTL DFKE L DKFDREIFT GHTNCVQ D+
Sbjct: 947 VEEPATTLDDFKEELQDKFDREIFTNDRGHTNCVQTDD 984