BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00039244
         (1855 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...   254   e-157
ref|XP_020092846.1| uncharacterized protein LOC109713256 [Ananas...   264   e-151
ref|XP_019163484.1| PREDICTED: uncharacterized protein LOC109159...   254   e-149
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]        244   e-146
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]        243   e-145
gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]   243   e-142
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]   243   e-142
ref|XP_023157287.1| protein binding protein isoform X1 [Zea mays]     232   e-139
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      244   e-139
gb|PKA61698.1| putative mitochondrial protein [Apostasia shenzhe...   229   e-139
gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]   231   e-139
gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   229   e-138
gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69...   232   e-137
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   221   e-137
ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769...   237   e-137
gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sa...   243   e-137
emb|CAH66499.1| H0321H01.8 [Oryza sativa]                             228   e-136
ref|XP_002451181.2| uncharacterized protein LOC8079158 [Sorghum ...   231   e-136
ref|XP_023156358.1| uncharacterized protein LOC111589729 isoform...   235   e-136
gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   221   e-136

>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score =  254 bits (650), Expect(3) = e-157
 Identities = 124/265 (46%), Positives = 178/265 (67%), Gaps = 4/265 (1%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS TGIG VLMQ+GRP+A+ S+ L  +  ++S Y+RE LA++ ++++W+HY  G + I
Sbjct: 738  TDASGTGIGGVLMQRGRPLAYFSRTLGVRAAAMSTYDREALAIIESLKRWRHYFLGTQLI 797

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I+TDQQ+LK++ DQKV   IQ K + +LL  D  I+Y+KG +N+ ADALSR+G  +    
Sbjct: 798  IRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADALSRRGNSVM--- 854

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++I +PSW++ V  SY ND + ++++   TL PN  + + L  G LRYKGR+ VG D +
Sbjct: 855  AISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLRYKGRIYVGKDPE 914

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            LR  I+H +H S   GHS    TY R+K + YWP MKK++   V+ C VC ++K +H  Y
Sbjct: 915  LRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECAVCQRSKAEHCHY 974

Query: 721  PGLLQPLPIPSQA*TH----YIHGL 783
            PGLL+PLPIP  A TH    +I GL
Sbjct: 975  PGLLEPLPIPDMAWTHISMDFIEGL 999



 Score =  254 bits (650), Expect(3) = e-157
 Identities = 123/275 (44%), Positives = 175/275 (63%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TS  W+ELFK M   +   +AYHPQT+GQ ER+N+C+E+YL CM    P+ W+ WLPLAE
Sbjct: 1060 TSKLWQELFKSMKVQLRFSTAYHPQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAE 1119

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKENLQQ 1337
            +WYNT FHT+LKL+PF ALYGFPPPL++        + EA D + +++ M+  LKENL Q
Sbjct: 1120 WWYNTTFHTALKLSPFQALYGFPPPLINEVAIPGPEDNEARDFLEEKQVMLRRLKENLAQ 1179

Query: 1338 AQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIGE 1517
            AQ+RMK + D  R+E+   VG+ V+ K+QP+R  +            +YGPF +++++G+
Sbjct: 1180 AQTRMKKYADLNRSERQLTVGDMVYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGK 1239

Query: 1518 MAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHRLN 1697
            +AY+L LP+   IHP+FH+S LK+      IP P+L +V  D  G  K  P  + E R  
Sbjct: 1240 VAYRLQLPEGVGIHPVFHISQLKQHCGANSIPSPELPMVGKD--GKIKTEPSLVKETRAM 1297

Query: 1698 NRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFP 1802
             R+   VTQ  V+  N  P+ ++WED +FIK  FP
Sbjct: 1298 PRNHTLVTQWLVQWANLPPEDASWEDASFIKSTFP 1332



 Score = 98.6 bits (244), Expect(3) = e-157
 Identities = 48/67 (71%), Positives = 55/67 (82%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLPSS GK+VI VVVDRFTKY H + LSHPY  Q VA+ F+DNI+KLH  PI+
Sbjct: 991  ISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSVPLSHPYSVQLVAQAFIDNIFKLHGFPIA 1050

Query: 950  IVIDRDK 970
            IV DRD+
Sbjct: 1051 IVSDRDR 1057


>ref|XP_020092846.1| uncharacterized protein LOC109713256 [Ananas comosus]
          Length = 1811

 Score =  264 bits (675), Expect(3) = e-151
 Identities = 128/251 (50%), Positives = 167/251 (66%)
 Frame = +1

Query: 4    DASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFII 183
            DA  TGIG VL Q  +PIA++SK +  K+  LS YE+EFLA+LMA+QKWKHYL    F+I
Sbjct: 1132 DACDTGIGAVLSQDEKPIAYLSKAIGGKHLGLSTYEKEFLAILMALQKWKHYLSMRTFVI 1191

Query: 184  KTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAA 363
            +TD ++LKYLL+Q+V TP+QQK + KL+G D  IQYRKG +N AADALSR         A
Sbjct: 1192 RTDHESLKYLLEQRVTTPMQQKGMMKLMGFDYTIQYRKGKENAAADALSRVTGEKGVTLA 1251

Query: 364  LAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQL 543
            +   IPSWVQ+V +SY  DP  +K+I    L      D+   +  LR+KG+L +G    L
Sbjct: 1252 ITAAIPSWVQEVTESYLGDPQCEKLICELPLQSTNQGDYSYHNELLRHKGKLYIGKSGHL 1311

Query: 544  RELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPYP 723
            RE ++ +MH S   GHS +  TY R+K+  YWP +KK+V EWVK C  C++NK D  P+ 
Sbjct: 1312 REKVIDQMHNSALGGHSGIQNTYRRIKQHFYWPGLKKEVEEWVKGCATCAQNKVDGTPHA 1371

Query: 724  GLLQPLPIPSQ 756
            GLLQPLPIP Q
Sbjct: 1372 GLLQPLPIPHQ 1382



 Score =  238 bits (606), Expect(3) = e-151
 Identities = 115/256 (44%), Positives = 165/256 (64%)
 Frame = +3

Query: 969  KKITSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLP 1148
            K  TS FWKELF+ MGT + M SAYHP+T+GQ ER+N+CLE YL C+   +P+ W  WL 
Sbjct: 1453 KIFTSQFWKELFQSMGTKLQMSSAYHPETDGQTERVNRCLETYLRCLCFQHPKKWHSWLA 1512

Query: 1149 LAEYWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKEN 1328
            LAE+WYNT+FH+S+ +TP+ ALYG+PPP         ST+ E  +   +R  +   L++ 
Sbjct: 1513 LAEWWYNTSFHSSIGMTPYEALYGYPPPNYLVTSITSSTSPEFREWAKEREGLTHELRDR 1572

Query: 1329 LQQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEK 1508
            LQ A+SRMK  VD+ R EK + +G+ V+ KLQP+RQ +            YYGPF+I+E+
Sbjct: 1573 LQVARSRMKQQVDRHRKEKEYAIGDWVYLKLQPYRQTTVAIRRNLKLAARYYGPFQIMER 1632

Query: 1509 IGEMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEH 1688
            IG +AY+L LP+ +++HP+FHVSLLKKS    +   P++  +  D+E      P ++LE 
Sbjct: 1633 IGPVAYKLQLPEGSRVHPVFHVSLLKKSSPAAVPASPNVPTLREDDE--LLTEPEKILER 1690

Query: 1689 RLNNRSGCKVTQIRVK 1736
            R+  R    VT++ VK
Sbjct: 1691 RMVQRGNKAVTEVLVK 1706



 Score = 87.8 bits (216), Expect(3) = e-151
 Identities = 42/67 (62%), Positives = 49/67 (73%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            +SMDFIE LP S GK  I+VVVDR TKY HF++L HP+ A  VA+ F+D IYKLH  P  
Sbjct: 1387 VSMDFIEALPKSEGKDAIMVVVDRLTKYAHFVSLKHPFSAPVVARTFMDTIYKLHGCPKR 1446

Query: 950  IVIDRDK 970
            IV DRDK
Sbjct: 1447 IVSDRDK 1453


>ref|XP_019163484.1| PREDICTED: uncharacterized protein LOC109159828 [Ipomoea nil]
          Length = 1873

 Score =  254 bits (650), Expect(3) = e-149
 Identities = 130/287 (45%), Positives = 181/287 (63%), Gaps = 1/287 (0%)
 Frame = +3

Query: 969  KKITSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLP 1148
            K  TS FW+ LFK M   +++ +AYHPQT+GQ ER+N+CLE+YL CM    P  W KWL 
Sbjct: 1248 KVFTSRFWQALFKNMQVQLNLSTAYHPQTDGQTERVNQCLESYLRCMAFQKPASWGKWLH 1307

Query: 1149 LAEYWYNTNFHTSLKLTPF*ALYGF-PPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKE 1325
            LAE+WYNTN+H++LK TPF ALYG+ PP L+    + D    +    + +R +++ TLKE
Sbjct: 1308 LAEWWYNTNYHSALKCTPFQALYGYTPPALVCNAIHKD----DESSWLIERNAVLATLKE 1363

Query: 1326 NLQQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILE 1505
            NL+QA +RMK   DK R+E+   VG+ V+ K+QP+RQ S            YYGP++++E
Sbjct: 1364 NLKQAHNRMKVQADKGRSERILMVGDWVYLKVQPYRQVSLAVRSNLKLASKYYGPYKVIE 1423

Query: 1506 KIGEMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLE 1685
            K+G +AY+L LP  A++HP+FHVS LKK V    +   D  V+D D  G     P+ +L 
Sbjct: 1424 KVGAVAYKLQLPAGAQLHPVFHVSQLKKRVGEGTVVQLDPPVLDKD--GQLLTEPVAVLG 1481

Query: 1686 HRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWGQG 1826
             RL  R+   VTQ+ V+  N     +TWED   +K +FP+ DPWGQG
Sbjct: 1482 KRLVERNNQAVTQLLVQWANLPDSAATWEDYYHLKSQFPSFDPWGQG 1528



 Score =  232 bits (591), Expect(3) = e-149
 Identities = 115/255 (45%), Positives = 169/255 (66%), Gaps = 3/255 (1%)
 Frame = +1

Query: 4    DASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFII 183
            DAS  G+G VL+Q+G+PIAF SK   +K+  LSIYE+E+L+++  + +W+ YL    F I
Sbjct: 927  DASHKGMGAVLVQEGKPIAFFSKAFGEKHLGLSIYEKEYLSIINVVDRWRPYLLERHFAI 986

Query: 184  KTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGV---PIQT 354
            KTD  +L++LL+QK+ T +QQK ++KLLGLD  IQY++G  N+ ADALSR+     P+  
Sbjct: 987  KTDHHSLQFLLEQKITTALQQKGLSKLLGLDYSIQYKRGADNQVADALSRRDYDEGPVLN 1046

Query: 355  CAALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSD 534
              A+++V P W+++V+ SYT D      +    +DP T     +T G LRYKGRL +GS+
Sbjct: 1047 --AISVVQPQWLEEVLNSYTGDTWASTNLTAALIDP-TDTTITVTSGLLRYKGRLYIGSN 1103

Query: 535  TQLRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHG 714
              LR+ ++ ++H S   GHS   GTY R+K + YW  +K+DVIE V+TC+ C + K ++ 
Sbjct: 1104 GTLRKELMLKLHESAIGGHSGQTGTYQRMKALFYWKGLKRDVIELVRTCDTCQRCKHENV 1163

Query: 715  PYPGLLQPLPIPSQA 759
              PGLLQPL IP +A
Sbjct: 1164 ANPGLLQPLNIPEEA 1178



 Score = 95.9 bits (237), Expect(3) = e-149
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLP S  K VILVVVDR TKY HF+A+SHPY A+ +A +F++NIY+LH  P S
Sbjct: 1182 ISMDFIEGLPLSKQKNVILVVVDRLTKYAHFIAVSHPYTAEIIANLFMENIYRLHGLPRS 1241

Query: 950  IVIDRDK 970
            I+ DRDK
Sbjct: 1242 IISDRDK 1248


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score =  244 bits (622), Expect(3) = e-146
 Identities = 122/279 (43%), Positives = 170/279 (60%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TS  WK++F+  G  +   SAYHPQT+GQ ER+N+CLENYL CM    P+ W   L  A+
Sbjct: 1035 TSQTWKDVFEKAGVKLHFSSAYHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAK 1094

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKENLQQ 1337
            +WYNT+FHT+L +TP+ AL+G PPPLL+      S   +A +    +  +   +K +L +
Sbjct: 1095 WWYNTSFHTTLGMTPYQALHGVPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLK 1154

Query: 1338 AQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIGE 1517
            AQ+RMK F D  R E+   VG+ V+ K+QP+R NS            YYGPF +LE+IG 
Sbjct: 1155 AQARMKHFADMNRTERVLTVGDMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGS 1214

Query: 1518 MAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHRLN 1697
            +AY+L LP S++IHP+FHVS LKK + PK++P P L +   D+ G     P  +LE RL 
Sbjct: 1215 VAYKLLLPASSQIHPVFHVSQLKKHIGPKVVPEPGLPL--TDDNGNILSQPTAVLERRLI 1272

Query: 1698 NRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
             ++   V Q +V+  N     +TWED AFI K FP  +P
Sbjct: 1273 PQNNAPVVQWKVQWANLPLSAATWEDAAFISKVFPAFNP 1311



 Score =  241 bits (615), Expect(3) = e-146
 Identities = 121/265 (45%), Positives = 164/265 (61%), Gaps = 5/265 (1%)
 Frame = +1

Query: 4    DASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFII 183
            DAS TG+G VLMQ  RP+A+ SK +  K   LS Y++E LA+L A++KWKHY  G   II
Sbjct: 712  DASGTGLGAVLMQNNRPLAYFSKAIGPKAAGLSTYDKEALAILEALKKWKHYFLGTSLII 771

Query: 184  KTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVP-IQTCA 360
            +TDQ +LKY+ +Q++   IQ K + KLL  D +I+Y+KG +N+AADALSR  +P +    
Sbjct: 772  RTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKIEYKKGKENKAADALSR--IPSVAQLF 829

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            +  I++P+W+ +++ SY  DP    + +   + P  +  + LT G LRYK RL VG+ T 
Sbjct: 830  STTIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYTLTSGILRYKNRLYVGAGTD 889

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            LR  +    H S   GHS    TY R K + YWP MKKD+  +VK C VC KNK +H   
Sbjct: 890  LRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKLCPVCQKNKSEHNLQ 949

Query: 721  PGLLQPLPIPSQA*TH----YIHGL 783
            PGLL PLPIP  A TH    +I GL
Sbjct: 950  PGLLHPLPIPEMAWTHISMDFIEGL 974



 Score = 86.3 bits (212), Expect(3) = e-146
 Identities = 41/67 (61%), Positives = 48/67 (71%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLP S  K VI V+VDRFTKY HF+ALSHP+ A  +   F++N YK H  P  
Sbjct: 966  ISMDFIEGLPKSDNKDVIWVIVDRFTKYAHFVALSHPFTADQIVTQFVENYYKHHGLPAV 1025

Query: 950  IVIDRDK 970
            IV DRD+
Sbjct: 1026 IVSDRDR 1032


>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
          Length = 1586

 Score =  243 bits (619), Expect(3) = e-145
 Identities = 118/279 (42%), Positives = 176/279 (63%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TS  ++E+FK M   +   ++YHPQT+GQ ER+N+CLE+YL  M    P  W  WL LAE
Sbjct: 1310 TSQLFQEIFKSMKVRLKFSTSYHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAE 1369

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKENLQQ 1337
            +WYNT +HTS+++TPF ALYG+PPP ++      + + EA   I Q+ +++  LK +L +
Sbjct: 1370 WWYNTTYHTSIQMTPFQALYGYPPPQINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTE 1429

Query: 1338 AQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIGE 1517
            AQ R+K + D+ R+E+T  VG+ V+ KLQP+RQ +            +YGPF+I+EK+G 
Sbjct: 1430 AQRRIKHYADRNRSERTLAVGDMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGR 1489

Query: 1518 MAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHRLN 1697
            +AY+L LP+ + IHP+FHVS LKK +  + +P+ +L  V  D  G  K  P+ +L+ R+ 
Sbjct: 1490 VAYKLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPD--GQIKTEPVAVLKRRMI 1547

Query: 1698 NRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
             R G  VTQ  V   N  P  +TWED + I+  FP+ +P
Sbjct: 1548 PRGGVAVTQWLVLWHNLSPSEATWEDASMIQSMFPSFNP 1586



 Score =  230 bits (587), Expect(3) = e-145
 Identities = 113/264 (42%), Positives = 165/264 (62%), Gaps = 4/264 (1%)
 Frame = +1

Query: 4    DASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFII 183
            DA   GIG VLMQ GRP+A+ SK L  K  + SIYE+E +A+L A++KW+HY+ G R II
Sbjct: 987  DACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQSIYEKEAMAILEALKKWRHYVLGSRLII 1046

Query: 184  KTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAA 363
            KTDQQ+LK++++Q+++  IQ K + KL+  D  I+Y+ G +N  ADALSR   P + C A
Sbjct: 1047 KTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVADALSRIP-PAEQCQA 1105

Query: 364  LAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQL 543
            +  VIP WV+ + +SY  D    KI++    + +T   +    G LRYKGR+ VG +T++
Sbjct: 1106 ITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGLLRYKGRIYVGENTEI 1165

Query: 544  RELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPYP 723
            RE ++   H S + GHS +  TY R+K + YWP +KK V  +++ C +C   K +H   P
Sbjct: 1166 REELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRECPICQVTKAEHIHIP 1225

Query: 724  GLLQPLPIPSQA*TH----YIHGL 783
            GLL PL +P  A  H    ++ GL
Sbjct: 1226 GLLDPLEVPDMAWAHITMDFVEGL 1249



 Score = 94.4 bits (233), Expect(3) = e-145
 Identities = 39/67 (58%), Positives = 55/67 (82%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            I+MDF+EGLP S GK VILVVVDR TKY HF+A++HPY  + V ++F++NI++LH  P++
Sbjct: 1241 ITMDFVEGLPKSNGKDVILVVVDRLTKYAHFIAMAHPYTVEQVVELFMNNIHRLHGMPMA 1300

Query: 950  IVIDRDK 970
            I+ DRD+
Sbjct: 1301 IITDRDR 1307


>gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1472

 Score =  243 bits (620), Expect(3) = e-142
 Identities = 123/265 (46%), Positives = 169/265 (63%), Gaps = 4/265 (1%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  GIG VLMQ+  P+A++SK L  K +++S+YERE LA++ A+QKW  YL    F+
Sbjct: 873  TDASGKGIGAVLMQEQHPVAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFV 932

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I+TDQ+++K++LDQK+ TP QQ W+ KLLG D EI Y++G+ N AADALSR+        
Sbjct: 933  IRTDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFEIHYKEGSSNLAADALSRKTGAELLPL 992

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
             L    P  +  +  S+  DP F+ II     +P ++  F  T G LR +G+L +GSD  
Sbjct: 993  FLDNAAPDLLTSITASWQQDPHFKAIILDLQSNPQSHPKFSWTRGELRRRGKLVIGSDPA 1052

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            ++E ILH +H S   GHS  + T  R+K + YW  M KD++ +VK C VC +NKPD   Y
Sbjct: 1053 VKESILHWLHDSALGGHSGRDVTATRIKSLFYWKGMTKDILHYVKNCGVCQRNKPDLAAY 1112

Query: 721  PGLLQPLPIPSQA*T----HYIHGL 783
            PGLLQPLPIP+Q  T     +I GL
Sbjct: 1113 PGLLQPLPIPTQIWTAISMDFIEGL 1137



 Score =  217 bits (553), Expect(3) = e-142
 Identities = 114/280 (40%), Positives = 166/280 (59%), Gaps = 2/280 (0%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S FW E FKL G ++   +AYHPQ++GQ E +NKCLE YL CM S  P  W KWL LAE+
Sbjct: 1199 STFWHEFFKLQGVALHKSTAYHPQSDGQTEIVNKCLETYLRCMCSSRPTNWFKWLSLAEW 1258

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYL--DSTNVEAGDLISQRRSMV*TLKENLQ 1334
            WYNTN+H+S+  TPF  +YG PPP+    PYL   S +      +  R   +  LK +L 
Sbjct: 1259 WYNTNYHSSIHTTPFEVVYGQPPPIHL--PYLPGSSPSFSVDRSLIARDEAIKLLKFHLL 1316

Query: 1335 QAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIG 1514
            +AQ+RM    +K R+++ F +G+ V+ KLQP+RQ S            +YGPF++L++IG
Sbjct: 1317 RAQNRMSQQANKHRSDRVFSIGDYVYLKLQPYRQLSMKKHGYNKLLPKFYGPFKVLDRIG 1376

Query: 1515 EMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHRL 1694
              AYQL+LP SA IH +FHVS LK    P+  P+  L        G  K+ P+ +L+ ++
Sbjct: 1377 GAAYQLELPPSAAIHNVFHVSQLKLCPNPQAQPIQHL---PSATAGVPKV-PVAILDRKM 1432

Query: 1695 NNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
              R     T++ V+  ++ P+ +TWE  + + KK+P+  P
Sbjct: 1433 VKRGNIAATKVLVQWQDSPPNLATWEFYSELLKKYPDFHP 1472



 Score = 97.4 bits (241), Expect(3) = e-142
 Identities = 45/66 (68%), Positives = 54/66 (81%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLP+S GK+VI VVVDR +KY HF+ALSHPY A  VA++FLDN++KLH  P +
Sbjct: 1129 ISMDFIEGLPTSAGKQVIFVVVDRLSKYAHFMALSHPYTALDVAQLFLDNVFKLHGMPET 1188

Query: 950  IVIDRD 967
            I  DRD
Sbjct: 1189 ITSDRD 1194


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score =  243 bits (620), Expect(3) = e-142
 Identities = 121/282 (42%), Positives = 172/282 (60%), Gaps = 5/282 (1%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TS FWKELFKL GT++   SAYHPQT+GQ E +NK +E YL C   D P+ W+KWLPLAE
Sbjct: 1190 TSTFWKELFKLQGTTLKFSSAYHPQTDGQTEIVNKMVEQYLRCFSGDKPKGWVKWLPLAE 1249

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTN--VEAGDLISQRRSMV*TLKENL 1331
            +WYNTN H S KL+PF ++YG+PPP L   PY   T    E  + +  R  ++  L+ NL
Sbjct: 1250 WWYNTNIHASTKLSPFESVYGYPPPKLI--PYTPGTTQLQEVENTLKTRDEIIRILRTNL 1307

Query: 1332 QQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKI 1511
            Q AQ RMK F D K   ++F +G+ V+ +LQP++Q S            +YGP+ +LEKI
Sbjct: 1308 QLAQDRMKKFADIKXTARSFNIGDLVYLRLQPYKQQSVVQRRNLKLSPRFYGPYRVLEKI 1367

Query: 1512 GEMAYQLDLPQSAKIHPIFHVSLLKKSVAPK---IIPLPDLLVVDVDNEGAFKITPLEML 1682
            G +AY+L+LP  AKIHP+FHVS LK+ +  +   ++ LP       D +G  +  P E+L
Sbjct: 1368 GTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLP-----PXDKDGVIRXEPEEIL 1422

Query: 1683 EHRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNI 1808
              RL  +    VT++ VK      D ++W + + +  +FP++
Sbjct: 1423 HRRLKKKKNHAVTEVLVKWKGLGEDEASWVEYSTLVNEFPDL 1464



 Score =  226 bits (576), Expect(3) = e-142
 Identities = 117/266 (43%), Positives = 170/266 (63%), Gaps = 6/266 (2%)
 Frame = +1

Query: 4    DASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFII 183
            DAS  G+G VLMQQGRP+A+MS+ +  K   LS YE+E +A+++A++KW+ YL GH F I
Sbjct: 864  DASGIGVGAVLMQQGRPLAYMSQAIHGKALQLSTYEKELMALVLAVKKWRSYLLGHNFKI 923

Query: 184  KTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCAA 363
            +TDQ +LKYLL+QK+ TP+QQKWITKLLG +  ++Y++G +N+ ADALSR+    +    
Sbjct: 924  QTDQXSLKYLLEQKMGTPLQQKWITKLLGYEFVVEYKQGKENKVADALSRKMEDQKEGKL 983

Query: 364  LAIVIP--SWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDT 537
             AI  P  +W++++   Y  DP  Q+II           ++   DG L YKGRL + +  
Sbjct: 984  YAITAPANTWLEQLRTXYAIDPKLQQIIKNLEQGSLASQNYKQRDGLLFYKGRLYIPASK 1043

Query: 538  QLRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGP 717
            +LRE IL+ +H S   GHS  + T  R K   YW  M+K+V  ++K C++C +NK ++  
Sbjct: 1044 ELREQILYLLHSSPQGGHSGFHKTLHRAKSEFYWEGMRKEVRRFIKECDICQQNKSENIH 1103

Query: 718  YPGLLQPLPIPSQA*T----HYIHGL 783
              GLLQPLPIP++  T     +I GL
Sbjct: 1104 PAGLLQPLPIPTKVWTDISLDFIEGL 1129



 Score = 88.6 bits (218), Expect(3) = e-142
 Identities = 41/66 (62%), Positives = 51/66 (77%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            IS+DFIEGLP+S    VI+VVVDR +KY HF+ +SHPY A  +A++FL NI+KLH  P S
Sbjct: 1121 ISLDFIEGLPNSESYSVIMVVVDRLSKYAHFIPISHPYTASKIAQVFLANIFKLHGLPNS 1180

Query: 950  IVIDRD 967
            IV DRD
Sbjct: 1181 IVTDRD 1186


>ref|XP_023157287.1| protein binding protein isoform X1 [Zea mays]
          Length = 1506

 Score =  232 bits (592), Expect(3) = e-139
 Identities = 116/250 (46%), Positives = 167/250 (66%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  G+G VLMQQGRPIAF+SK L +KN+ LSIYE+EFLA++MA+ KW+ YLQ   F+
Sbjct: 887  TDASDVGLGAVLMQQGRPIAFLSKALGEKNKHLSIYEKEFLALIMAVDKWRQYLQRGAFV 946

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            IKTD ++L +L DQ++ + +Q+K +TKL+GL  +I Y+KG +N  ADALSR+   +   A
Sbjct: 947  IKTDHKSLTFLGDQQLQSDLQKKAMTKLMGLQFQIVYKKGAENVVADALSRRS-SVLDLA 1005

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++ V P WVQ+V+ SY  D   Q++IA   +       F L  G +R  GR+ +G+++ 
Sbjct: 1006 AISEVQPVWVQEVLNSYATDAEAQQLIAQLLVRSPDENGFSLYQGIIRKAGRIWIGANSA 1065

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            LR  ++  +H S   GHS    TY R+K+V YW  +K DV+++V+ C +C K K +    
Sbjct: 1066 LRTKLVAALHDSALGGHSGTQATYQRVKKVFYWRGLKADVVQFVQQCAICQKAKSERTHP 1125

Query: 721  PGLLQPLPIP 750
             GLLQPLP+P
Sbjct: 1126 AGLLQPLPVP 1135



 Score =  226 bits (577), Expect(3) = e-139
 Identities = 115/288 (39%), Positives = 165/288 (57%), Gaps = 3/288 (1%)
 Frame = +3

Query: 969  KKITSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLP 1148
            K  TS FWK LF+LM   + M +AYHPQT+GQ ER+N+CLE YL C V+  P  W  WL 
Sbjct: 1208 KVFTSSFWKNLFQLMEVKLLMSTAYHPQTDGQSERVNQCLEMYLRCAVNSQPTKWKSWLA 1267

Query: 1149 LAEYWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKEN 1328
            LAEYWYNT +H  L  TPF  LYG+  P+L+    ++  + +    + +R +    LKE 
Sbjct: 1268 LAEYWYNTTYHVVLGCTPFRVLYGYDAPMLALPRLINIEDPDVTTWVKERSAFSAMLKEQ 1327

Query: 1329 LQQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEK 1508
            L +AQ RMK + DK R  + F+VGE V  KLQP+ Q +            ++GP++I+ +
Sbjct: 1328 LARAQLRMKQYADKGRTPREFQVGELVLLKLQPYAQKTVVNRPCPKLSFKFFGPYKIIAR 1387

Query: 1509 IGEMAYQLDLPQSAKIHPIFHVSLLK---KSVAPKIIPLPDLLVVDVDNEGAFKITPLEM 1679
            +G +AY+L+LP  A++HP+FHVS LK      +P    LP  L+VD+       + P ++
Sbjct: 1388 VGAVAYKLELPPDAQVHPVFHVSQLKPFHPCYSPVYTELP--LLVDLSQG---DVEPDQI 1442

Query: 1680 LEHRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWGQ 1823
            L  R+  +    + Q+ VK      D +TWED   +K +FP    WGQ
Sbjct: 1443 LNRRMVRKGNNAIVQVLVKWTGLPADAATWEDYEVVKARFPTAHAWGQ 1490



 Score = 90.5 bits (223), Expect(3) = e-139
 Identities = 42/67 (62%), Positives = 51/67 (76%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ++MDFIEGLP S G   ILVVVDRF+KY HF  L HP+ A+ VA++FLDN+ KLH  P S
Sbjct: 1142 VTMDFIEGLPKSEGFDTILVVVDRFSKYSHFFPLKHPFTAKGVAQVFLDNVVKLHGVPKS 1201

Query: 950  IVIDRDK 970
            +V DRDK
Sbjct: 1202 LVSDRDK 1208


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  244 bits (622), Expect(3) = e-139
 Identities = 116/253 (45%), Positives = 171/253 (67%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS+ G+G VLMQ G P+AF+SK L  KN+ LS YE+E++A+++AI +W+ YLQ   FI
Sbjct: 941  TDASYYGVGAVLMQSGHPLAFLSKALGPKNQGLSTYEKEYMAIILAIAQWRSYLQLAEFI 1000

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I TD ++L  L +Q++ T  QQK  TKL GL  +I YRKG  N AADALSR+      C 
Sbjct: 1001 IYTDHRSLAQLNEQRLHTIWQQKMYTKLAGLQYKIVYRKGVDNGAADALSRKVQEDSHCC 1060

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++  +P+W+Q+VV+ Y  DP+ ++++A   L+    A F L  G +R+K R+ +G + Q
Sbjct: 1061 AISHSVPTWLQEVVEGYDKDPTSKQLLAQLILNSADKAPFSLHQGIIRHKNRIWLGGNLQ 1120

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            L++ +L  MH +   GHS    TY ++K++ YWP M+ DV+++V++C VC ++KPD   Y
Sbjct: 1121 LQQKVLQAMHDTAVGGHSGAPATYHKVKQMFYWPGMRADVLQYVQSCTVCQQSKPDRAKY 1180

Query: 721  PGLLQPLPIPSQA 759
            PGLLQPL +P QA
Sbjct: 1181 PGLLQPLEVPPQA 1193



 Score =  211 bits (537), Expect(3) = e-139
 Identities = 112/284 (39%), Positives = 165/284 (58%), Gaps = 2/284 (0%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TS FW++LF++ GT++ M S+YHPQ++GQ ERLN+CLE +L C V   P  W  WL +AE
Sbjct: 1266 TSSFWQQLFQITGTNLSMSSSYHPQSDGQTERLNQCLETFLRCYVHTCPSRWSAWLSVAE 1325

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDST--NVEAGDLISQRRSMV*TLKENL 1331
            YWYNT  H++L  TPF  LYG  P     G  +D+     E    + +R  M   +K +L
Sbjct: 1326 YWYNTTVHSTLGRTPFEVLYGHTP--RHFGILVDTVVPQPELETWLKERELMTKVIKLHL 1383

Query: 1332 QQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKI 1511
             +AQ RMK   DK+R+E+ F VG+ V+ KLQP+ Q+S            ++GPF+I +++
Sbjct: 1384 HRAQDRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRL 1443

Query: 1512 GEMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHR 1691
            G +AY+L LP S+ IHPIFHVS LK+ +       P L      + G  ++ P  +L+ R
Sbjct: 1444 GSVAYRLALPASSSIHPIFHVSQLKRVIGRDQRASPQL----PQDVGPIQV-PTRILQRR 1498

Query: 1692 LNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWGQ 1823
              +R G  + Q++V       D +TWED+  ++ +FP    W Q
Sbjct: 1499 FIDRGGELIAQVKVVWSGMTEDLATWEDVEALRARFPKALIWDQ 1542



 Score = 93.6 bits (231), Expect(3) = e-139
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            IS+DFIEGLP S     ILVVVD+F+KYGHFL L HP+ A  VA++FLDN+YKLH  P++
Sbjct: 1197 ISLDFIEGLPRSAHYNCILVVVDKFSKYGHFLPLLHPFTAAKVARVFLDNVYKLHGLPVN 1256

Query: 950  IVIDRDK 970
            I+ DRD+
Sbjct: 1257 IISDRDR 1263


>gb|PKA61698.1| putative mitochondrial protein [Apostasia shenzhenica]
          Length = 1390

 Score =  229 bits (583), Expect(3) = e-139
 Identities = 122/260 (46%), Positives = 167/260 (64%), Gaps = 7/260 (2%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  GIG VLMQ+GRPIA+ SK LS KN  LSIYE+E LA++ AIQKW+HYL G  F 
Sbjct: 787  TDASGNGIGAVLMQEGRPIAYFSKALSGKNLLLSIYEKEMLAIVAAIQKWRHYLVGVHFK 846

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I+TDQ++LKYL++Q++ TP QQKWI +L+G D EI +++G  N+ ADALSR     +T +
Sbjct: 847  IRTDQESLKYLMEQRISTPAQQKWIARLIGYDYEITFKRGVDNKVADALSR-----RTFS 901

Query: 361  ALAI-------VIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRL 519
            + AI       +  + +Q++ QS+  D   Q++I  + L  N    +   +  LR KG+L
Sbjct: 902  SAAIQGHIVQGISTNLMQRIQQSWQTDSKLQQLI--SDLQINPVLPYSWKNQQLRRKGKL 959

Query: 520  SVGSDTQLRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKN 699
             VGSD++LR  I+  MH     GHS    T  R+K V +W  + K V   +K CEVC ++
Sbjct: 960  VVGSDSELRFHIVQMMHADATGGHSGAYATMKRIKTVFHWRGINKLVRAMIKQCEVCQRS 1019

Query: 700  KPDHGPYPGLLQPLPIPSQA 759
            K D   YPG LQPLPIP++A
Sbjct: 1020 KYDASAYPGFLQPLPIPNKA 1039



 Score =  218 bits (556), Expect(3) = e-139
 Identities = 112/284 (39%), Positives = 179/284 (63%), Gaps = 6/284 (2%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S FWK+  +L G +  M +AYHPQT+GQ E +N+CLE YL CM  + P+ W++WLPLAE+
Sbjct: 1113 SKFWKDFLRLQGVAQHMSTAYHPQTDGQTEVVNRCLETYLRCMTHERPKQWVRWLPLAEW 1172

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPY-LDSTNVEAGD-LISQRRSMV*TLKENLQ 1334
            WYNTN+H+S++++P+ ALYG   PL  + PY    + V+A D  +S   +    LK+NL+
Sbjct: 1173 WYNTNYHSSIRMSPYEALYGQSAPL--SVPYTTGESEVDAVDRSLSAHETARIMLKKNLE 1230

Query: 1335 QAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIG 1514
             AQ+RM+   ++KR+E T EV + V+ KL+P+RQ+S            Y+ PF+++EKIG
Sbjct: 1231 IAQNRMRQLANRKRSECTLEVTDWVYVKLKPYRQDSIAHRVSHKLSPRYFSPFQVIEKIG 1290

Query: 1515 EMAYQLDLPQSAKIHPIFHVSLLKKSVA--PKIIPLPDLLVVDVDNEGAFKITPLEMLEH 1688
             +AY+L LP+ +KIH +FH+S+LKK V   P     P +L    ++ G   + P+ +L+ 
Sbjct: 1291 SVAYKLKLPEGSKIHAVFHISMLKKHVGNHPAEGSFPSML----NDHGQVVLEPIAILDR 1346

Query: 1689 RLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFP--NIDP 1814
            RL  +      Q+ ++  NA  + +TW ++  +++ FP  N++P
Sbjct: 1347 RLIKKKNRIQVQLLIQWSNASKEDATWMNVEVMRQNFPQFNLNP 1390



 Score =  100 bits (249), Expect(3) = e-139
 Identities = 47/66 (71%), Positives = 54/66 (81%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLP S G+ +ILVVVDR TKY HF+ALSHPY A  VA+IFLDN++KLH  P +
Sbjct: 1043 ISMDFIEGLPPSNGRNIILVVVDRLTKYAHFIALSHPYSALEVAQIFLDNVFKLHGMPTT 1102

Query: 950  IVIDRD 967
            IV DRD
Sbjct: 1103 IVSDRD 1108


>gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1479

 Score =  231 bits (588), Expect(3) = e-139
 Identities = 119/252 (47%), Positives = 160/252 (63%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  GIG VLMQQ  PIA++SK L  K +++S+YERE LA++ A+QKW  YL    FI
Sbjct: 880  TDASGKGIGAVLMQQHHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGAYLSHAPFI 939

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            IKTDQ+++K++LDQK+ T  QQ W+ KL+G D EIQY++G  N AADALSR+        
Sbjct: 940  IKTDQRSIKHILDQKLNTSFQQAWVAKLMGFDFEIQYKEGAHNLAADALSRREGAELLPM 999

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
             L    P   + +  S+T DPS QK+IA   L+ N++  F      LR +G+L +G D  
Sbjct: 1000 LLNSASPDLYESIKASWTRDPSVQKLIADLVLNHNSHPKFSWVRNELRRRGKLVIGQDPH 1059

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            L+  IL  +H S+  GHS  + T  R+K + YW  M KD+  +V+ C VC +NK D    
Sbjct: 1060 LKNSILRWLHDSSVGGHSGRDITAARVKSLFYWKGMAKDIQIYVRNCAVCQRNKADLSAS 1119

Query: 721  PGLLQPLPIPSQ 756
            PGLLQPLPIPS+
Sbjct: 1120 PGLLQPLPIPSK 1131



 Score =  220 bits (560), Expect(3) = e-139
 Identities = 113/283 (39%), Positives = 169/283 (59%), Gaps = 5/283 (1%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S FW E FKL G +++  +AYHPQ++GQ E +NK +E YL CM S+ P  W +W+P+AEY
Sbjct: 1206 STFWNEFFKLQGVALNKSTAYHPQSDGQTEIVNKAVETYLRCMCSEKPTSWSQWIPMAEY 1265

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLD--STNVEAGDLISQRRSMV*TLKENLQ 1334
            WYN+NFH++++ TP+  +YG PPP+    PYL   S++V     +  R   +  LK +L 
Sbjct: 1266 WYNSNFHSAIQTTPYEVVYGQPPPIHL--PYLPGASSSVTVDGSLLAREEAIKLLKFHLL 1323

Query: 1335 QAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIG 1514
            +AQ+RM    DK R+++ FE+G+ V+ KL P+RQ S            ++GPF++++K+G
Sbjct: 1324 RAQNRMIQQADKHRSDRKFEIGDFVYLKLHPYRQLSVKPHLHHKLLPKFFGPFKVIDKVG 1383

Query: 1515 EMAYQLDLPQSAKIHPIFHVSLLKKSVAP---KIIPLPDLLVVDVDNEGAFKITPLEMLE 1685
             +AYQL+LP S  IH +FHVS LK    P    I+P+P      VD    F   P  +L+
Sbjct: 1384 HVAYQLELPSSVAIHNVFHVSQLKLCPNPASNPIVPIP----AGVDQ---FHRVPEAILD 1436

Query: 1686 HRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
             ++  R     T++ VK  N  P+ +TWE    + +KFPN  P
Sbjct: 1437 RKMVKRGRTAATKVLVKWQNTSPELATWEFYYDLLEKFPNFHP 1479



 Score = 96.7 bits (239), Expect(3) = e-139
 Identities = 45/66 (68%), Positives = 52/66 (78%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLP S GK+VI VVVDR +KY HF+ LSHPY A  +AK+FLDN++KLH  P S
Sbjct: 1136 ISMDFIEGLPPSAGKQVIFVVVDRLSKYAHFIPLSHPYTAVDIAKVFLDNVFKLHGLPES 1195

Query: 950  IVIDRD 967
            I  DRD
Sbjct: 1196 ITSDRD 1201


>gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1005

 Score =  229 bits (583), Expect(3) = e-138
 Identities = 120/265 (45%), Positives = 165/265 (62%), Gaps = 4/265 (1%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  GIG VLMQ   PIA++SK L  K +++S+YERE LA++ A+QKW  YL    FI
Sbjct: 406  TDASGKGIGAVLMQNQHPIAYISKSLGPKQQAMSVYERELLAIVYAVQKWGSYLSHAPFI 465

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            IKTDQ+++K++LDQK+ TP QQ W+ KLLG D EIQY++G+ N AADALSR+        
Sbjct: 466  IKTDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFEIQYKEGSSNLAADALSRKVGAELLPL 525

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
             L+       + +  ++  D   + II     DP +++ F      LR +G+L +GS+  
Sbjct: 526  ILSNASDDLWESINLAWQQDTHLKAIIHDLKKDPKSHSKFSWIRDELRRRGKLVIGSNPT 585

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            ++E IL  +H S   GHS  + T  R+K + YW  M KD+I +VK C +C KNKPD    
Sbjct: 586  IKETILTWLHSSAIGGHSGRDVTTSRVKSLFYWKGMNKDIITFVKNCAICQKNKPDLAAS 645

Query: 721  PGLLQPLPIPSQA*TH----YIHGL 783
            PGLLQPLPIP+Q  TH    ++ GL
Sbjct: 646  PGLLQPLPIPNQIWTHISMDFVEGL 670



 Score =  217 bits (553), Expect(3) = e-138
 Identities = 116/281 (41%), Positives = 168/281 (59%), Gaps = 3/281 (1%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S FW + FKL G +++  SAYHPQ++GQ E +NKCLE YL CM SD P  W KWL LAE+
Sbjct: 732  SSFWNDFFKLQGVALNKSSAYHPQSDGQTEVVNKCLETYLRCMCSDRPTQWFKWLSLAEW 791

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAG---DLISQRRSMV*TLKENL 1331
            WYN+N+H+S+  TPF  +YG PPP+    PYL  ++  A     LI+ R   +  LK +L
Sbjct: 792  WYNSNYHSSIHTTPFEVVYGQPPPIHL--PYLPGSSATASVDRSLIA-REEAIKLLKFHL 848

Query: 1332 QQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKI 1511
             +AQ+RM    +K R+++ F +G+ V+ KLQP+RQ S            +YGPF +L++I
Sbjct: 849  LRAQNRMTQQANKHRSDRVFAIGDYVYLKLQPYRQLSMKSHGFHKLLPKFYGPFPVLDRI 908

Query: 1512 GEMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHR 1691
            G  AYQL+LP SA IH +FHVS LK    P+ +P+   +   + +E      P+ +L+ +
Sbjct: 909  GSTAYQLELPPSAAIHNVFHVSQLKLCPNPQGMPIQH-IPASLSHETRI---PIAILDRK 964

Query: 1692 LNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
            +  R     T++ V+  +   D +TWE    + KKFPN  P
Sbjct: 965  MVKRGNRAATKVLVQWKDLPMDKATWEFYYDLLKKFPNFHP 1005



 Score = 98.2 bits (243), Expect(3) = e-138
 Identities = 45/66 (68%), Positives = 55/66 (83%)
 Frame = +2

Query: 770 ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
           ISMDF+EGLP+S GK+VI VVVDR +KY HF+ALSHPY A  VA++FLDN++KLH  P S
Sbjct: 662 ISMDFVEGLPTSVGKQVIFVVVDRLSKYAHFMALSHPYTASDVAQLFLDNVFKLHGLPES 721

Query: 950 IVIDRD 967
           I+ DRD
Sbjct: 722 IISDRD 727


>gb|AAG51046.1|AC069473_8 gypsy/Ty-3 retroelement polyprotein; 69905-74404 [Arabidopsis
            thaliana]
 dbj|BAB03109.1| retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1499

 Score =  232 bits (591), Expect(3) = e-137
 Identities = 119/282 (42%), Positives = 175/282 (62%), Gaps = 4/282 (1%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TS FW+E F L G ++ + SAYHPQ++GQ E +N+CLE YL CM  D P+LW KWL LAE
Sbjct: 1225 TSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETYLRCMCHDRPQLWSKWLALAE 1284

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYL--DSTNVEAGDLISQRRSMV*TLKENL 1331
            YWYNTN+H+S ++TPF  +YG  PP+    PYL  +S        + +R  M+  LK +L
Sbjct: 1285 YWYNTNYHSSSRMTPFEIVYGQVPPVHL--PYLPGESKVAVVARSLQEREDMLLFLKFHL 1342

Query: 1332 QQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKI 1511
             +AQ RMK F D+ R E+ FE+G+ V+ KLQP+RQ S            Y+GP++I+++ 
Sbjct: 1343 MRAQHRMKQFADQHRTEREFEIGDYVYVKLQPYRQQSVVMRANQKLSPKYFGPYKIIDRC 1402

Query: 1512 GEMAYQLDLPQSAKIHPIFHVSLLKKSV--APKIIPLPDLLVVDVDNEGAFKITPLEMLE 1685
            GE+AY+L LP  +++HP+FHVS LK  V      + LP ++      +  F+  P +++E
Sbjct: 1403 GEVAYKLALPSYSQVHPVFHVSQLKVLVGNVSTTVHLPSVM------QDVFEKVPEKVVE 1456

Query: 1686 HRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNID 1811
             ++ NR G  VT++ VK  N   + +TWE L  ++K FP  +
Sbjct: 1457 RKMVNRQGKAVTKVLVKWSNEPLEEATWEFLFDLQKTFPEFE 1498



 Score =  217 bits (552), Expect(3) = e-137
 Identities = 116/265 (43%), Positives = 162/265 (61%), Gaps = 4/265 (1%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDA   GIG VLMQ+G P+A++S+ L  K   LSIYE+E LAV+ A++KW+HYL    FI
Sbjct: 900  TDACGQGIGAVLMQEGHPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFI 959

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            IKTDQ++LKYLL+Q++ TPIQQ+W+ KLL  D EIQYR+G +N  ADALSR         
Sbjct: 960  IKTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKENVVADALSRVEGSEVLHM 1019

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A+ +V    ++ +   Y ND   Q II     DP++   F  +   LR K ++ V ++  
Sbjct: 1020 AMTVVECDLLKDIQAGYANDSQLQDIITALQRDPDSKKYFSWSQNILRRKSKIVVPANDN 1079

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            ++  IL  +HGS   GHS  + T+ R+K + YW  M KD+  ++++C  C + K D    
Sbjct: 1080 IKNTILLWLHGSGVGGHSGRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAAS 1139

Query: 721  PGLLQPLPIP----SQA*THYIHGL 783
            PGLLQPLPIP    S+    +I GL
Sbjct: 1140 PGLLQPLPIPDTIWSEVSMDFIEGL 1164



 Score = 94.0 bits (232), Expect(3) = e-137
 Identities = 45/66 (68%), Positives = 53/66 (80%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            +SMDFIEGLP SGGK VI+VVVDR +K  HF+ALSHPY A +VA  +LDN++KLH  P S
Sbjct: 1156 VSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLDNVFKLHGCPTS 1215

Query: 950  IVIDRD 967
            IV DRD
Sbjct: 1216 IVSDRD 1221


>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1478

 Score =  221 bits (563), Expect(3) = e-137
 Identities = 115/256 (44%), Positives = 161/256 (62%), Gaps = 5/256 (1%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS TGIG VLMQ   P+A++SK L  K +++SIYERE LA++ A+QKW  YL    F+
Sbjct: 879  TDASGTGIGAVLMQDHHPVAYISKSLGPKQQAMSIYEREMLAIVYAVQKWGSYLSHAPFV 938

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            IKTDQ+++K++LDQK+ TP QQ W+ KL+G D EIQYR+G+ N AADALSR     +T A
Sbjct: 939  IKTDQKSIKHMLDQKLNTPFQQVWVAKLMGFDFEIQYREGSSNLAADALSR-----KTGA 993

Query: 361  ALAIVI-----PSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSV 525
             L I++        +Q +  S+ +D     II     DP  +  F      LR +G+L +
Sbjct: 994  ELLILLLNNASTDLLQAIQLSWQSDSILNSIIQDLQKDPKIHPKFSWVRNELRRRGKLVI 1053

Query: 526  GSDTQLRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKP 705
            G++  ++  IL  +H S   GHS  + T  R++ + YW  M KDV+ +V+ C +C K+KP
Sbjct: 1054 GANHDIKLSILSWLHDSAIGGHSGRDVTLSRIRSLFYWKGMAKDVLNYVRNCGICQKSKP 1113

Query: 706  DHGPYPGLLQPLPIPS 753
            D    PGLLQPLPIP+
Sbjct: 1114 DLAASPGLLQPLPIPT 1129



 Score =  221 bits (562), Expect(3) = e-137
 Identities = 116/280 (41%), Positives = 163/280 (58%), Gaps = 2/280 (0%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S FW E FKL G +++  SAYHPQ++GQ E +NKCLE YL CM SD P  W KWL LAE+
Sbjct: 1205 STFWNEFFKLQGVALNKSSAYHPQSDGQTEIVNKCLETYLRCMCSDKPTQWFKWLSLAEW 1264

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLD--STNVEAGDLISQRRSMV*TLKENLQ 1334
            WYNTN+H+S++ TPF  +YG PPP+    PYL   +T+V     +  R  ++  L+ +L 
Sbjct: 1265 WYNTNYHSSIRTTPFEVVYGQPPPIHL--PYLPGAATSVSVDRSLIAREEVIKLLQFHLL 1322

Query: 1335 QAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIG 1514
            +AQ+RM    DK R+++ F +G+ V+ KLQP+RQ S            +YGPF++L++IG
Sbjct: 1323 RAQNRMSQQADKHRSDRVFSIGDFVYLKLQPYRQLSLKSHGVHKLLPKFYGPFKVLDRIG 1382

Query: 1515 EMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHRL 1694
              AY LDLP S   H +FHVS LK    P   P+  L         A    P  +L+ ++
Sbjct: 1383 LAAYALDLPPSTVFHNVFHVSQLKLCPNPHHHPIQHLPA----EISAVSKVPTAILDRKM 1438

Query: 1695 NNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
              R     T++ V+  ++ PD +TWE    + KKFP   P
Sbjct: 1439 VKRGHVAATKVLVQWKDSPPDAATWEFYHDLIKKFPEFHP 1478



 Score = 99.4 bits (246), Expect(3) = e-137
 Identities = 46/66 (69%), Positives = 54/66 (81%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            ISMDFIEGLP SGGK+VI VVVDR +KY HF+AL+HPY A  VA++FLDN++KLH  P S
Sbjct: 1135 ISMDFIEGLPKSGGKQVIFVVVDRLSKYAHFMALAHPYTASDVAQLFLDNVFKLHGLPES 1194

Query: 950  IVIDRD 967
            I  DRD
Sbjct: 1195 ITSDRD 1200


>ref|XP_010491426.2| PREDICTED: uncharacterized protein LOC104769009 [Camelina sativa]
          Length = 1585

 Score =  237 bits (605), Expect(3) = e-137
 Identities = 122/284 (42%), Positives = 177/284 (62%), Gaps = 2/284 (0%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S FW+ELF L G  +   SAYHPQ++GQ E +N+CLE YL CM SD P LW  WLPLAE+
Sbjct: 1300 STFWRELFTLQGVDLKFSSAYHPQSDGQTEVVNRCLETYLRCMCSDKPHLWSSWLPLAEF 1359

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYL--DSTNVEAGDLISQRRSMV*TLKENLQ 1334
            WYNTNFHT+ +++PF A+YG  PP+    PYL  +S        + +R SM+  LK +L 
Sbjct: 1360 WYNTNFHTATQMSPFEAVYGQSPPVHL--PYLPGESKVAVVARSLQERESMLLILKFHLL 1417

Query: 1335 QAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIG 1514
            +AQ RMK F D  R +++FE+G+ VF K QP+RQ S            Y+GP++I+++ G
Sbjct: 1418 RAQHRMKQFADSHRTDRSFEIGDSVFVKHQPYRQGSVVVRSNQKLSPKYFGPYKIVDRCG 1477

Query: 1515 EMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLEHRL 1694
            ++AY+L LP  ++IHP+FHVS L K+V  +++    L  + VD        P+ +L+ ++
Sbjct: 1478 KVAYKLLLPGGSQIHPVFHVSQL-KAVVGQVLTSTQLPSIVVD---VLVKAPVSILDRKM 1533

Query: 1695 NNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWGQG 1826
              R G  VT + V+  N   + +TWE L  +++KFP  +P GQG
Sbjct: 1534 VKRQGRAVTMVLVQWTNETAEEATWEYLYDLQRKFPAFEPCGQG 1577



 Score =  215 bits (547), Expect(3) = e-137
 Identities = 112/250 (44%), Positives = 158/250 (63%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDA   GIG VLMQ+G P+AF+S+ L  K  +LSIYE+E LAV+ A+QKW+HYL  + FI
Sbjct: 974  TDACTKGIGAVLMQEGHPLAFISRHLKGKQLNLSIYEKELLAVVFAVQKWRHYLLPNHFI 1033

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I+TDQ++LKYLL+Q++ TPIQQ+W+ KLL  D EIQYR+G  N AADALSR         
Sbjct: 1034 IRTDQRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQGKDNIAADALSRVEGAEVLHM 1093

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++++    ++ +   Y  D   +K+I     +      +  T   LR K ++ V ++ Q
Sbjct: 1094 AMSVLECDLLKDIQAHYATDAELKKLIDDLAANIPAKKHYTWTQSILRRKTKIVVPNNIQ 1153

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            LR+ IL  MH S   GH   + TY ++K + YW  M  D+ +++++C VC + K D   Y
Sbjct: 1154 LRDSILQWMHCSGTGGHLGRDATYQKVKGLFYWKGMAVDIQKYIRSCAVCQQCKYDTSAY 1213

Query: 721  PGLLQPLPIP 750
            PGLLQPLPIP
Sbjct: 1214 PGLLQPLPIP 1223



 Score = 88.6 bits (218), Expect(3) = e-137
 Identities = 42/66 (63%), Positives = 51/66 (77%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            +SMDFI+GLP S GK VI VVVDR TK  HF+AL+HPY A +VA+ F+D ++KLH  P S
Sbjct: 1230 LSMDFIDGLPDSAGKTVIFVVVDRLTKAAHFMALAHPYSAVTVAQAFMDTVFKLHGCPRS 1289

Query: 950  IVIDRD 967
            IV DRD
Sbjct: 1290 IVSDRD 1295


>gb|AAG13508.1|AC068924_13 putative gag-pol polyprotein [Oryza sativa Japonica Group]
          Length = 1608

 Score =  243 bits (621), Expect(3) = e-137
 Identities = 117/253 (46%), Positives = 172/253 (67%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  GIG VL Q+  PIA++S+ L  K R LS YE+E++A+++A++ W+ YLQ   FI
Sbjct: 939  TDASDVGIGAVLSQEKHPIAYLSRALGPKTRGLSTYEKEYMAIILAVEHWRPYLQQGEFI 998

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I TD  +L +L +Q++ TP QQK  TKLLGL  +I YRKG  N AADALSR+  PI   A
Sbjct: 999  ILTDHHSLMHLTEQRLHTPWQQKAFTKLLGLQYKICYRKGVSNAAADALSRRESPISEVA 1058

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++  IPSW+Q+++Q Y  D   ++++A   + PN+  D+ L  G L+YKG++ VG++T 
Sbjct: 1059 AISECIPSWMQELMQGYQLDGQSKQLLAELAISPNSRKDYQLCQGILKYKGKIWVGNNTA 1118

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            L+  +++E+H +   GHS    TY ++K +  WP MKK + E +++C+VC + KPD   Y
Sbjct: 1119 LQHKLVNELHATPLGGHSGFPVTYRKVKSLFAWPGMKKLIKEQLQSCQVCLQAKPDRARY 1178

Query: 721  PGLLQPLPIPSQA 759
            PGLLQPLP+P+ A
Sbjct: 1179 PGLLQPLPVPAGA 1191



 Score =  212 bits (540), Expect(3) = e-137
 Identities = 117/294 (39%), Positives = 168/294 (57%), Gaps = 4/294 (1%)
 Frame = +3

Query: 969  KKITSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLP 1148
            K  TS FW +LF   GT + M SAYHPQ++GQ ER+N+CLE YL C V   P  W  WL 
Sbjct: 1261 KIFTSQFWDQLFSKFGTDLHMSSAYHPQSDGQTERVNQCLEIYLRCFVHAAPHKWSSWLY 1320

Query: 1149 LAEYWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNV-EAGDLISQRRSMV*TLKE 1325
            LAE+WYNT+FH++L  TPF  LYG+ P     G  LD   + +  +  ++R+ M   L++
Sbjct: 1321 LAEFWYNTSFHSTLNKTPFEVLYGYTPSHFGIG--LDDCQIADLHEWHTERKFMQQLLQQ 1378

Query: 1326 NLQQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILE 1505
            +L +AQ +MK   DKKR+ + F VG+ V+ KLQP+ Q              YYGPF+++ 
Sbjct: 1379 HLNRAQQQMKHQADKKRSFRQFAVGDWVYLKLQPYVQTFVAQRACHKLAFRYYGPFQVMS 1438

Query: 1506 KIGEMAYQLDLPQSAKIHPIFHVSLLKKSV--APKI-IPLPDLLVVDVDNEGAFKITPLE 1676
            ++G +AY + LP ++ IHP+FHVS LK +V  + K+   LP  L       GA ++ P +
Sbjct: 1439 RVGTVAYHIQLPATSSIHPVFHVSQLKAAVGFSKKVQDELPTSL-------GALQV-PFQ 1490

Query: 1677 MLEHRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWGQGPQTD 1838
             L+ RL  +    V Q+     ++ P  STWED+  +  +FP    WGQ    D
Sbjct: 1491 FLDKRLVKKGNRSVLQLLTHWYHSSPSESTWEDMEDLFARFPRALAWGQASFQD 1544



 Score = 84.7 bits (208), Expect(3) = e-137
 Identities = 41/67 (61%), Positives = 50/67 (74%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            IS+DFIEGLP S     ILVVVD+F+KY HF+ LSHP+ A  VA+ F+ NIYKLH  P +
Sbjct: 1195 ISLDFIEGLPRSSHYNCILVVVDKFSKYSHFIPLSHPFNAGGVAQEFMKNIYKLHGLPRA 1254

Query: 950  IVIDRDK 970
            I+ DRDK
Sbjct: 1255 IISDRDK 1261


>emb|CAH66499.1| H0321H01.8 [Oryza sativa]
          Length = 1602

 Score =  228 bits (582), Expect(3) = e-136
 Identities = 118/299 (39%), Positives = 177/299 (59%), Gaps = 4/299 (1%)
 Frame = +3

Query: 969  KKITSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLP 1148
            K  TS  W++LF   GT +   SAYHPQ++GQ ER+N+CLE YL C V   P  W  WL 
Sbjct: 1245 KIFTSQLWEQLFLRAGTKLHYSSAYHPQSDGQTERVNQCLEIYLRCFVHSTPSKWYSWLH 1304

Query: 1149 LAEYWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKEN 1328
            LAEYWYN+ +H+SL  TPF  LYG+PP         D    E    +  R+ M   ++++
Sbjct: 1305 LAEYWYNSTYHSSLGTTPFEVLYGYPPNHFGISS-RDCAIPELSVWLRDRKFMQQLVQQH 1363

Query: 1329 LQQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEK 1508
            L +AQ +MK F DKKR+ + F +G+ V+ KLQP+ Q+S            YYGPF++++K
Sbjct: 1364 LHRAQQQMKHFADKKRSFRQFTIGDWVYLKLQPYVQSSVAPRANHKLAFKYYGPFQVIDK 1423

Query: 1509 IGEMAYQLDLPQSAKIHPIFHVSLLKKS---VAPKIIPLPDLLVVDVDNEGAFKITPLEM 1679
            +G +AY+L LP+++ +HP+FHVSLLK +     P  + LP  +V       ++++ PL +
Sbjct: 1424 LGTVAYKLQLPETSSVHPVFHVSLLKPAKGFTQPAFLQLPSEVV-------SWQL-PLAI 1475

Query: 1680 LEHRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWGQGP-QTDEVLSC 1853
            L+ RL  +    +TQ+ +   +  P+ +TWEDL  +K +FPN   WGQ   Q + ++ C
Sbjct: 1476 LDQRLAKKGNSVITQVLIHWSHTVPEQATWEDLEDLKTRFPNALAWGQAKIQGEGIVRC 1534



 Score =  224 bits (571), Expect(3) = e-136
 Identities = 113/251 (45%), Positives = 160/251 (63%), Gaps = 1/251 (0%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS  GIG VL Q   PIA++SK L  + R LS YE+E +A+L+A+  W+ YLQ   FI
Sbjct: 922  TDASDCGIGAVLSQDKHPIAYVSKALGPRTRGLSTYEKECMAILLAVDHWRSYLQHGEFI 981

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQT-C 357
            I TD  +L +L DQ++ TP Q K  TKLLGL  +I YRKG+ N AADALSR+     +  
Sbjct: 982  ILTDHHSLMHLSDQRLHTPWQHKAFTKLLGLQYKICYRKGSSNAAADALSRKFQDSNSEI 1041

Query: 358  AALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDT 537
             A++  +P W+ +V Q Y  D    K+++T  + P  +  + L +G +RYK R+ VG++ 
Sbjct: 1042 FAISSSVPQWLMEVTQGYEKDAQAAKLLSTLAIHPEKHIHYFLDNGIIRYKNRIWVGNNP 1101

Query: 538  QLRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGP 717
            +L+  ++ E+H S   GHS    TY ++K++  WPNMKK + E V+ C+VC + KPD   
Sbjct: 1102 ELQLKLIRELHASPVGGHSGFPVTYRKIKQLFAWPNMKKMIKESVQRCQVCLQAKPDRLK 1161

Query: 718  YPGLLQPLPIP 750
            YPGLLQPLP+P
Sbjct: 1162 YPGLLQPLPVP 1172



 Score = 86.7 bits (213), Expect(3) = e-136
 Identities = 41/67 (61%), Positives = 51/67 (76%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            +S+DFIEGLP S G   ILVVVDRF+KY HF+AL HP+ A  VA+ ++ +IYKLH  P +
Sbjct: 1179 VSLDFIEGLPKSAGYNCILVVVDRFSKYAHFVALKHPFTAIDVAQAYMFHIYKLHGLPQT 1238

Query: 950  IVIDRDK 970
            IV DRDK
Sbjct: 1239 IVSDRDK 1245


>ref|XP_002451181.2| uncharacterized protein LOC8079158 [Sorghum bicolor]
          Length = 1809

 Score =  231 bits (589), Expect(3) = e-136
 Identities = 108/253 (42%), Positives = 163/253 (64%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDA  TG+G VLMQ   P+AF+SK L  ++R LS YE+E+LA+L+A+ +W+ YLQ   F 
Sbjct: 1156 TDACDTGVGAVLMQDNHPLAFVSKALGPRSRGLSTYEKEYLAILVAVDQWRSYLQHAEFT 1215

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I TDQ++L ++ DQ++ TP Q K  TKL+GL   + Y+ GT N AADALSR   P     
Sbjct: 1216 IFTDQRSLMHISDQRLHTPWQMKMYTKLIGLQYRVVYKPGTSNAAADALSRHPSPSGHLL 1275

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++  +P W+ +V   Y++DP+  ++I   +L+P+ +  F L  G LR+KGR+ +G +  
Sbjct: 1276 AISSAVPDWLAEVAAGYSSDPAATRLIQELSLNPSAHPPFSLHSGVLRHKGRIWLGQNAP 1335

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            ++  ++  +H S   GHS    T+ R+K++ YWP MK  V  +V +C VC + K DH  Y
Sbjct: 1336 VQLKVIEALHNSAVGGHSGFPVTFGRIKQLFYWPGMKSAVRSFVASCSVCQQAKSDHSKY 1395

Query: 721  PGLLQPLPIPSQA 759
            PGLL PLP+P+++
Sbjct: 1396 PGLLLPLPVPTES 1408



 Score =  225 bits (573), Expect(3) = e-136
 Identities = 118/284 (41%), Positives = 173/284 (60%), Gaps = 3/284 (1%)
 Frame = +3

Query: 978  TSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAE 1157
            TSLFWKELFKL    + M SAYHPQ++GQ ER+N+CLE YL C V   PR WLKWL LAE
Sbjct: 1481 TSLFWKELFKLAQVELCMSSAYHPQSDGQTERVNQCLETYLRCFVHSCPRSWLKWLTLAE 1540

Query: 1158 YWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDLISQRRSMV*TLKENLQQ 1337
            YWYNT  H++L  +PF  LYG  P          S   +    +++R +M+  ++++L +
Sbjct: 1541 YWYNTCHHSALGKSPFEVLYGRLPRHFGITDISVSPVPDVASKLAERNTMLAAVRQHLLR 1600

Query: 1338 AQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIGE 1517
            AQ RMKA  DK+R+E++F VG+ V+ +LQP+ Q+S            ++GP+EI+EKI  
Sbjct: 1601 AQQRMKAHADKRRSERSFSVGDFVYLRLQPYVQSSLAPRAHHKLCFKFFGPYEIIEKINP 1660

Query: 1518 MAYQLDLPQSAKIHPIFHVSLLK-KSVAPKII--PLPDLLVVDVDNEGAFKITPLEMLEH 1688
            +AY+L LP+ + IHP+FHVS+LK  S  P  +   LP       D + + ++ P ++L+ 
Sbjct: 1661 VAYKLKLPEESSIHPVFHVSMLKPASARPSSVSATLP-------DTDDSIQV-PEKILQR 1712

Query: 1689 RLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWG 1820
            RL+++    V Q+ VK    +   +TWED   + ++FP    WG
Sbjct: 1713 RLHHQGARVVPQLLVKWSGMEDSLATWEDEVALLQRFPGAPAWG 1756



 Score = 82.8 bits (203), Expect(3) = e-136
 Identities = 38/67 (56%), Positives = 50/67 (74%)
 Frame = +2

Query: 767  IISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPI 946
            +ISMDFIEGLP+SG    ILVVVD+F+K+ HF+ L H + A  VA+ FLD++Y+LH  P 
Sbjct: 1411 VISMDFIEGLPTSGHANCILVVVDKFSKFAHFVPLHHLFTAAKVAQSFLDSVYRLHGMPS 1470

Query: 947  SIVIDRD 967
             I+ DRD
Sbjct: 1471 HIISDRD 1477


>ref|XP_023156358.1| uncharacterized protein LOC111589729 isoform X1 [Zea mays]
          Length = 1567

 Score =  235 bits (600), Expect(3) = e-136
 Identities = 125/285 (43%), Positives = 170/285 (59%), Gaps = 1/285 (0%)
 Frame = +3

Query: 969  KKITSLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLP 1148
            K  TS FW+ELFKL GT + + SAYHPQ++GQ ER+N+CLE +L C V ++P  W KWL 
Sbjct: 1261 KVFTSTFWQELFKLSGTQLHLSSAYHPQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLD 1320

Query: 1149 LAEYWYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYLDSTNVEAGDL-ISQRRSMV*TLKE 1325
             AE WYNT++HTS+K +PF ALYG  P  L   P  DS N     L + QR+  +  +K 
Sbjct: 1321 SAELWYNTSYHTSIKCSPFKALYGVEPN-LGCIPVTDSLNPSEAQLTLQQRQEFLEVIKT 1379

Query: 1326 NLQQAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILE 1505
            NL  AQSRMK + D  R+ + F++G+ V+ KLQPF Q S            Y+GPF+I++
Sbjct: 1380 NLASAQSRMKHYADLNRSFRQFQIGDLVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVD 1439

Query: 1506 KIGEMAYQLDLPQSAKIHPIFHVSLLKKSVAPKIIPLPDLLVVDVDNEGAFKITPLEMLE 1685
            K+G  AY+L LP+SA IHP+FHVS LK  V P   P+   L     +E      P  +L+
Sbjct: 1440 KVGSAAYKLLLPESANIHPVFHVSQLKTHV-PDYTPVFTELPPTAFSENVTP-NPERILD 1497

Query: 1686 HRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDPWG 1820
             RL  +    VTQI +K      + ++WED   ++ +FPN   WG
Sbjct: 1498 RRLVKKGSAAVTQILIKWEGIPVEMASWEDYTVLQSRFPNSSIWG 1542



 Score =  216 bits (551), Expect(3) = e-136
 Identities = 109/253 (43%), Positives = 157/253 (62%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDA  TGIG VL Q+G P+AF SK L  KN  LS YE+EFLA+LMA++KW+ YL    F+
Sbjct: 940  TDACDTGIGAVLSQKGHPVAFYSKALGVKNSQLSTYEKEFLAILMAVEKWRCYLSRGPFV 999

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            I+TD ++L +L DQ + T +Q+K +TKL GL   +QY+KG +N+AADALSR    ++  +
Sbjct: 1000 IRTDHRSLCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAADALSRVAHNME-LS 1058

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
            A++   P W+Q++  SY  D   Q ++A   +       F L +G +    RL VG +  
Sbjct: 1059 AISATTPVWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGLIYKNNRLVVGQNVG 1118

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            L+  ++   H S   GHS +  TY R+K++  W  +K DV ++V+ C VC + K +H  Y
Sbjct: 1119 LQTKLISAFHASPLGGHSGIQATYQRVKKLFLWNGLKADVEQFVRQCHVCQQAKHEHCKY 1178

Query: 721  PGLLQPLPIPSQA 759
            PGLLQPLPIP  +
Sbjct: 1179 PGLLQPLPIPQSS 1191



 Score = 86.7 bits (213), Expect(3) = e-136
 Identities = 41/67 (61%), Positives = 48/67 (71%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            +SMDFIEGLP S G  VILVVVDR TKY HFLA+ HP+ A  +A +F   + KLH  P +
Sbjct: 1195 LSMDFIEGLPKSNGYSVILVVVDRLTKYAHFLAVKHPFTASHIAHLFFSQVVKLHGFPHT 1254

Query: 950  IVIDRDK 970
            IV DRDK
Sbjct: 1255 IVSDRDK 1261


>gb|PNX92994.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1476

 Score =  221 bits (564), Expect(3) = e-136
 Identities = 113/252 (44%), Positives = 161/252 (63%)
 Frame = +1

Query: 1    TDASWTGIGVVLMQQGRPIAFMSKVLSQKNRSLSIYEREFLAVLMAIQKWKHYLQGHRFI 180
            TDAS TGIG VLMQ   P+A++SK L  K +++SIYERE LA++ A+Q+W  YL    F+
Sbjct: 875  TDASGTGIGAVLMQDRHPVAYISKALGIKQQAMSIYERELLAIVYAVQRWGTYLAHKPFV 934

Query: 181  IKTDQQALKYLLDQKVMTPIQQKWITKLLGLDSEIQYRKGTKNRAADALSRQGVPIQTCA 360
            IKTDQ+++K++L+Q++ TP QQ W+ KL+G D EIQY++GT N AADALSR+        
Sbjct: 935  IKTDQKSIKHMLEQRLNTPFQQVWMAKLMGFDFEIQYKEGTSNVAADALSRKVGAELLPL 994

Query: 361  ALAIVIPSWVQKVVQSYTNDPSFQKIIATNTLDPNTYADFVLTDGALRYKGRLSVGSDTQ 540
             L  V  +  + +  S++ DP+ Q II+    +   ++ F    G LR KG+L VGSD  
Sbjct: 995  FLGNVNENLFEMIKDSWSADPNLQVIISDLQTNTKPHSKFSWYRGELRRKGKLVVGSDPT 1054

Query: 541  LRELILHEMHGSTYWGHSAVNGTYMRLKEVLYWPNMKKDVIEWVKTCEVCSKNKPDHGPY 720
            L   IL   H S   GHS  + T  R+K + +W  M KD+ ++++ C+VC + KP+  P 
Sbjct: 1055 LHRFILKWFHDSPAGGHSGRDVTAARIKSLFFWKGMTKDIQQYIRNCDVCQRCKPEQIPS 1114

Query: 721  PGLLQPLPIPSQ 756
            PGLLQPLPIP +
Sbjct: 1115 PGLLQPLPIPDK 1126



 Score =  221 bits (563), Expect(3) = e-136
 Identities = 112/283 (39%), Positives = 172/283 (60%), Gaps = 5/283 (1%)
 Frame = +3

Query: 981  SLFWKELFKLMGTSMDMFSAYHPQTNGQRERLNKCLENYLWCMVSDNPRLWLKWLPLAEY 1160
            S  W +LF+L G  ++  +AYHPQT+GQ E +NKCLE YL CM +D P  W+KWL LAE+
Sbjct: 1201 SKLWNDLFQLQGVYLNKSTAYHPQTDGQTEIVNKCLETYLRCMCADKPSSWIKWLSLAEW 1260

Query: 1161 WYNTNFHTSLKLTPF*ALYGFPPPLLSTGPYL--DSTNVEAGDLISQRRSMV*TLKENLQ 1334
            WYNTNFH+S++ TPF  +YG  PPL    PYL  +S++++    +  R + +  LK +L 
Sbjct: 1261 WYNTNFHSSIQTTPFEVVYGQTPPLHL--PYLPGESSSLQVDRTLHARETAIQMLKFHLM 1318

Query: 1335 QAQSRMKAFVDKKRAEKTFEVGEKVFFKLQPFRQNSAXXXXXXXXXXXYYGPFEILEKIG 1514
            +AQ+RM    DK R ++ F +G+ V+ KLQP+RQ+S            +YGP++++++IG
Sbjct: 1319 RAQNRMAQHADKHRTDRIFHIGDFVYLKLQPYRQSSVRLQRHHKLMPKFYGPYKVVDRIG 1378

Query: 1515 EMAYQLDLPQSAKIHPIFHVSLLKK---SVAPKIIPLPDLLVVDVDNEGAFKITPLEMLE 1685
              AYQL+LP +AKIH +FHVS LK+   +    + P+P ++  +       ++ P  +L+
Sbjct: 1379 AAAYQLELPSTAKIHNVFHVSQLKRCKNANETAVHPMPGIISSEFT-----QLEPESILD 1433

Query: 1686 HRLNNRSGCKVTQIRVK*LNADPDFSTWEDLAFIKKKFPNIDP 1814
             ++  R     T++ VK      + +TWE    + KKFPN  P
Sbjct: 1434 RKMVKRGRIAATKVLVKWKELPQEKATWEFYYDLLKKFPNFHP 1476



 Score = 94.4 bits (233), Expect(3) = e-136
 Identities = 44/66 (66%), Positives = 54/66 (81%)
 Frame = +2

Query: 770  ISMDFIEGLPSSGGKKVILVVVDRFTKYGHFLALSHPYIAQSVAKIFLDNIYKLHRQPIS 949
            IS+DFIEGLPSS GK+VI VVVDR +KY HF+ALSHP+ A  VA++FLDN++KLH  P +
Sbjct: 1131 ISLDFIEGLPSSMGKQVIFVVVDRLSKYAHFMALSHPFTALDVAQLFLDNVFKLHGLPST 1190

Query: 950  IVIDRD 967
            I  DRD
Sbjct: 1191 ITSDRD 1196