BLASTX nr result
ID: Rehmannia29_contig00039215
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00039215
(663 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera] 135 1e-50
ref|XP_019074267.1| PREDICTED: uncharacterized protein LOC109122... 135 1e-50
ref|XP_019054242.1| PREDICTED: uncharacterized protein LOC109115... 132 3e-48
ref|XP_016719135.1| PREDICTED: uncharacterized mitochondrial pro... 122 1e-46
ref|XP_016754681.1| PREDICTED: uncharacterized mitochondrial pro... 127 1e-46
dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subte... 129 3e-46
ref|XP_024020247.1| uncharacterized protein LOC112091288 [Morus ... 126 5e-46
dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subt... 128 6e-46
ref|XP_017632731.1| PREDICTED: uncharacterized mitochondrial pro... 131 8e-46
gb|PNY10806.1| histone deacetylase [Trifolium pratense] 123 1e-45
ref|XP_016747820.1| PREDICTED: uncharacterized mitochondrial pro... 125 1e-45
dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subt... 125 1e-44
gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense] 124 1e-44
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 133 1e-44
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo... 123 1e-44
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo... 123 1e-44
gb|PNX99662.1| retrovirus-related Pol polyprotein from transposo... 122 1e-44
gb|KZV54184.1| hypothetical protein F511_36903 [Dorcoceras hygro... 128 1e-44
gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifo... 128 2e-44
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 121 2e-44
>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
Length = 1262
Score = 135 bits (341), Expect(3) = 1e-50
Identities = 64/104 (61%), Positives = 77/104 (74%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PLD HWKAVKRILRYL GT LG+ + N+ + DADW SDVDD+RSTS C FLG
Sbjct: 1069 PLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLG 1128
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELK 167
+ L+SWSSKK T SRSST +EYRSLA +T E++W+ SLL EL+
Sbjct: 1129 KSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQ 1172
Score = 63.2 bits (152), Expect(3) = 1e-50
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -2
Query: 146 IVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
++W DN V L+ANPV HSRTKH+ELDL+F+RE VM + +V+ HV
Sbjct: 1180 VIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHV 1225
Score = 50.8 bits (120), Expect(3) = 1e-50
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L + +DGAK L +PM++ L G PI + + Y +VGALQY+T+T P I F
Sbjct: 1003 LKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAF 1057
>ref|XP_019074267.1| PREDICTED: uncharacterized protein LOC109122243 [Vitis vinifera]
Length = 392
Score = 135 bits (341), Expect(3) = 1e-50
Identities = 64/104 (61%), Positives = 77/104 (74%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PLD HWKAVKRILRYL GT LG+ + N+ + DADW SDVDD+RSTS C FLG
Sbjct: 199 PLDTHWKAVKRILRYLNGTTDLGIVLKPSETMNLVGFCDADWGSDVDDRRSTSGHCVFLG 258
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELK 167
+ L+SWSSKK T SRSST +EYRSLA +T E++W+ SLL EL+
Sbjct: 259 KSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQ 302
Score = 63.2 bits (152), Expect(3) = 1e-50
Identities = 27/46 (58%), Positives = 36/46 (78%)
Frame = -2
Query: 146 IVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
++W DN V L+ANPV HSRTKH+ELDL+F+RE VM + +V+ HV
Sbjct: 310 VIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHV 355
Score = 50.8 bits (120), Expect(3) = 1e-50
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L + +DGAK L +PM++ L G PI + + Y +VGALQY+T+T P I F
Sbjct: 133 LKKTKMDGAKSLPTPMLSGLKLSAGMGDPIDNVFEYRSVVGALQYITITRPEIAF 187
>ref|XP_019054242.1| PREDICTED: uncharacterized protein LOC109115063 [Nelumbo nucifera]
Length = 411
Score = 132 bits (332), Expect(3) = 3e-48
Identities = 59/108 (54%), Positives = 80/108 (74%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PL+ HWK +KRILRYLAGT GL + + N + +++DADWASD+DD+RST+ C +LG
Sbjct: 196 PLEPHWKLIKRILRYLAGTVSHGLHLKATQNLCLYAFSDADWASDIDDRRSTTGFCVYLG 255
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIR 155
E L+SWSSKK T+SRSST +EYR +A E+ WI SLL+E+ + +R
Sbjct: 256 ENLVSWSSKKQHTISRSSTEAEYRGMAHAVAEVAWIQSLLREMNVTLR 303
Score = 54.7 bits (130), Expect(3) = 3e-48
Identities = 22/52 (42%), Positives = 39/52 (75%)
Frame = -2
Query: 158 KRPSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
++ ++ DN ++ L+AN + HSRTKH+ELD+HF+RE V+ K + ++HV++
Sbjct: 303 RKVPLLLCDNLNSILLSANSILHSRTKHMELDIHFVREKVIRKELEVEHVTS 354
Score = 54.3 bits (129), Expect(3) = 3e-48
Identities = 25/55 (45%), Positives = 36/55 (65%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L R + AKG+++PM T+ L EG+P+ DA Y +VGALQY T+T P I++
Sbjct: 130 LQRVHMSQAKGVDTPMPTSLRLSKVEGEPVVDAITYRSVVGALQYATVTRPEISY 184
>ref|XP_016719135.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
ref|XP_016683890.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
Length = 391
Score = 122 bits (307), Expect(3) = 1e-46
Identities = 60/112 (53%), Positives = 78/112 (69%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PLD H+K VKRILRYL GT GLK T S + + Y+DA W SDVDD+R TS C FLG
Sbjct: 198 PLDLHFKVVKRILRYLQGTLDYGLKFTRTSRFLLEGYSDASWGSDVDDRRLTSGFCVFLG 257
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
ISWSS+K +SRS+ +EYRS+A VT E++WI +LL EL +++ +A+
Sbjct: 258 GNPISWSSRKQQVISRSTAEAEYRSVALVTAEVVWIRALLTELGISVPTKAV 309
Score = 59.7 bits (143), Expect(3) = 1e-46
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L +A +D A GL +PM+TT L YEG P++D Y IVGA+QYV +T P+I +
Sbjct: 132 LQKASMDKANGLPTPMVTTSRLSAYEGSPVEDERQYRSIVGAVQYVVITRPDIAY 186
Score = 53.9 bits (128), Expect(3) = 1e-46
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = -2
Query: 149 SIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
++VW D+ AV +A NPV HS+ KH E+DL F+RE V + V+ + H+SA
Sbjct: 308 AVVWCDSSAAVAVAGNPVMHSKFKHAEMDLLFVREKVADGVLHVGHISA 356
>ref|XP_016754681.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
ref|XP_016754682.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
ref|XP_016754683.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
ref|XP_016754684.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
Length = 231
Score = 127 bits (318), Expect(3) = 1e-46
Identities = 63/112 (56%), Positives = 79/112 (70%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PLD H+KAVKRILRYL GT G+ T S + + +++A W SD DD+RSTS C FLG
Sbjct: 58 PLDLHFKAVKRILRYLRGTLDYGMNFTRRSKFLLEGFSNASWGSDADDRRSTSGYCVFLG 117
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
L SWSS+K VSRS+ +EYRSLA VT E++WI SLL EL +I+G+AL
Sbjct: 118 GNLFSWSSRKQQVVSRSTAEAEYRSLAHVTAEMVWIQSLLSELGASIKGKAL 169
Score = 55.8 bits (133), Expect(3) = 1e-46
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -2
Query: 158 KRPSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
K ++VW D+ AV +A NPV HS+ KH+ELDL F+RE V N++ + HV
Sbjct: 165 KGKALVWCDSSAAVAVAGNPVMHSKFKHVELDLFFVRETVANRLFQVGHV 214
Score = 53.1 bits (126), Expect(3) = 1e-46
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = -2
Query: 647 IDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
+D + L +PM+ T L +EG P+ DA+LY IVGALQYV +T P+I F
Sbjct: 1 MDKSNELPTPMVITCHLSAHEGTPVDDAHLYRSIVGALQYVVITRPDIAF 50
>dbj|GAU30708.1| hypothetical protein TSUD_39320 [Trifolium subterraneum]
Length = 1432
Score = 129 bits (323), Expect(3) = 3e-46
Identities = 64/116 (55%), Positives = 83/116 (71%), Gaps = 3/116 (2%)
Frame = -3
Query: 481 YPLDNHWKAVKRILRYLAGTKKLGLKI---TSCSNYNITSYADADWASDVDDKRSTSSLC 311
+PLD+HWKAVKRILRYL GT GL I T+ +++ +Y+DADWA+D DD+RSTS C
Sbjct: 1236 HPLDSHWKAVKRILRYLKGTINHGLLIQPSTTGPPFSLRAYSDADWATDQDDRRSTSGSC 1295
Query: 310 TFLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
+ G L+SWSSKK V+RSST +EYRS+A T E++WI SLLQEL++ L
Sbjct: 1296 IYFGPNLVSWSSKKQQLVARSSTEAEYRSMANTTAELLWIQSLLQELQVPFHAPTL 1351
Score = 59.7 bits (143), Expect(3) = 3e-46
Identities = 27/44 (61%), Positives = 36/44 (81%)
Frame = -2
Query: 134 DNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
DN AV LA NP+ HSRTKH+ELD+HF+RE V++K + ++HVSA
Sbjct: 1354 DNISAVSLAHNPILHSRTKHIELDIHFVREKVLSKQLNVRHVSA 1397
Score = 46.2 bits (108), Expect(3) = 3e-46
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
LSR ++ K + SPM + L + +QDA LY VGALQY T+T P+I +
Sbjct: 1171 LSRTNMEHCKPIGSPMANSCRLSKFGTDIMQDASLYRSTVGALQYATLTRPDIAY 1225
>ref|XP_024020247.1| uncharacterized protein LOC112091288 [Morus notabilis]
Length = 395
Score = 126 bits (316), Expect(3) = 5e-46
Identities = 57/108 (52%), Positives = 78/108 (72%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PL+ HW+AVKRILRYL GT GL + + N+ + DADWASD DD++STS C +LG
Sbjct: 196 PLETHWRAVKRILRYLRGTLDFGLHLQKSTQLNLLGFCDADWASDPDDRKSTSGYCVYLG 255
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIR 155
++SW SKK T+SR +T +EYRSLA V ++ W+ SLL+ELK++I+
Sbjct: 256 SNIVSWCSKKQHTISRLTTEAEYRSLANVVAKVTWLLSLLKELKVDIQ 303
Score = 64.7 bits (156), Expect(3) = 5e-46
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -2
Query: 146 IVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
+VW DN V LAANPV H+RTKH+ELDL+F+RE V++KVI ++HV A
Sbjct: 307 VVWCDNLSTVQLAANPVLHARTKHVELDLYFVREKVIHKVIDVKHVPA 354
Score = 43.1 bits (100), Expect(3) = 5e-46
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L +A + AK + +PM T L + ++ LY IVGALQYVT+T P +++
Sbjct: 130 LCKAKMQDAKPIGAPMTTGFKLSAFGSDEVESPQLYRSIVGALQYVTITRPELSY 184
>dbj|GAU29238.1| hypothetical protein TSUD_362280 [Trifolium subterraneum]
Length = 1433
Score = 128 bits (321), Expect(3) = 6e-46
Identities = 62/109 (56%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Frame = -3
Query: 481 YPLDNHWKAVKRILRYLAGTKKLGLKI---TSCSNYNITSYADADWASDVDDKRSTSSLC 311
+PL++HWKAVKRILRYL GT GL + TS +++ +Y+DADWA+D DD+RSTS C
Sbjct: 1237 HPLESHWKAVKRILRYLKGTINHGLLLHPSTSSPPFSLRAYSDADWATDQDDRRSTSGSC 1296
Query: 310 TFLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKL 164
+ G L+SWSSKK V+RSST +EYRS+A T E++WI SLLQEL++
Sbjct: 1297 IYFGPNLVSWSSKKQQLVARSSTEAEYRSMANTTAELLWIQSLLQELQV 1345
Score = 59.7 bits (143), Expect(3) = 6e-46
Identities = 28/44 (63%), Positives = 35/44 (79%)
Frame = -2
Query: 134 DNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
DN AV LA NP+ HSRTKHLELD+HF+RE V +K + ++HVSA
Sbjct: 1355 DNISAVALAHNPILHSRTKHLELDIHFVREKVTSKQLNVKHVSA 1398
Score = 45.8 bits (107), Expect(3) = 6e-46
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
LS+ ++ K + SPM+ + L + + DA LY VGALQY T+T P+I +
Sbjct: 1172 LSKTNMENCKPIGSPMVNSCRLSKFGTDAMTDASLYRSTVGALQYATLTRPDIAY 1226
>ref|XP_017632731.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium arboreum]
Length = 344
Score = 131 bits (330), Expect(3) = 8e-46
Identities = 66/112 (58%), Positives = 81/112 (72%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PLD H+KAVKRILRYL GT GL T S + +Y++A WASDVDD+RSTS C FLG
Sbjct: 147 PLDTHYKAVKRILRYLRGTLDCGLCFTRTSKLLLEAYSNASWASDVDDRRSTSGFCVFLG 206
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
E LISWSS+K VSRS+ EYRSLAQVT E++W+ SLL EL + + +A+
Sbjct: 207 ENLISWSSRKQSVVSRSTEEEEYRSLAQVTAEMVWVKSLLSELGIPVTHKAV 258
Score = 54.3 bits (129), Expect(3) = 8e-46
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = -2
Query: 167 IEHKRPSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVS 6
+ HK +++W DN AV +A NPV HS+ KH+ELDL F+RE V N + H+S
Sbjct: 253 VTHK--AVLWCDNSAAVAVANNPVMHSKFKHMELDLFFVREQVANGSFQVGHLS 304
Score = 47.4 bits (111), Expect(3) = 8e-46
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
+ RA + +K + M+T+ L +EG P++D L+ +VGALQYV +T P+I F
Sbjct: 81 IQRASMAKSKPSPTSMVTSCKLSAHEGTPVEDENLFRSVVGALQYVVITRPDIAF 135
>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
Length = 1441
Score = 123 bits (309), Expect(3) = 1e-45
Identities = 62/115 (53%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKIT---SCSNYNITSYADADWASDVDDKRSTSSLCT 308
PL +HW+AVKRILRYL T GL + + S ++I +Y+D+DWASD+DD+RSTS C
Sbjct: 1247 PLLSHWQAVKRILRYLLHTSSHGLLLQPSQAVSKFSIRAYSDSDWASDMDDRRSTSGCCV 1306
Query: 307 FLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
F G L+SWS+KK V+RSS +EYR+LA T EIMWI SLL +L++ I AL
Sbjct: 1307 FFGPNLVSWSAKKQTLVARSSAEAEYRALAHTTSEIMWIQSLLMDLRIPIHTPAL 1361
Score = 57.8 bits (138), Expect(3) = 1e-45
Identities = 27/42 (64%), Positives = 33/42 (78%)
Frame = -2
Query: 134 DNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
DN AV +A NPV H+RTKHLELD+HF+RE V+ K + IQHV
Sbjct: 1364 DNVSAVLIAHNPVLHARTKHLELDIHFVREKVVTKNLTIQHV 1405
Score = 51.6 bits (122), Expect(3) = 1e-45
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L RA + AKG+N+PM+++ L + + D Y IVGALQYVT+T P+I F
Sbjct: 1181 LHRANMADAKGINTPMVSSLKLSKFGTDELPDPLEYRSIVGALQYVTLTRPDIAF 1235
>ref|XP_016747820.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Gossypium hirsutum]
Length = 286
Score = 125 bits (313), Expect(3) = 1e-45
Identities = 63/112 (56%), Positives = 80/112 (71%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PLD H+KAVKRILRYL GT GL T S + ++DA W SD++D+RSTSS C FLG
Sbjct: 88 PLDVHFKAVKRILRYLHGTLDHGLHFTKNSKLLLEGFSDASWGSDINDRRSTSSYCVFLG 147
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
ISWSS+K VSRS+ +EYRSLA V E++W+ SLL EL +++RG+AL
Sbjct: 148 GSPISWSSRKQQVVSRSTAEAEYRSLAHVIAEMIWVQSLLTELGVSLRGKAL 199
Score = 57.0 bits (136), Expect(3) = 1e-45
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L RA ++G+K ++PMITT L EGQ +++ LY IVGALQYV +T P+I F
Sbjct: 22 LRRASMEGSKATSTPMITTCQLSATEGQLVENVSLYRSIVGALQYVVITRPDIAF 76
Score = 50.4 bits (119), Expect(3) = 1e-45
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = -2
Query: 149 SIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
++VW D+ AV +A NPV HS+ KH+ELDL F+RE + + + HV
Sbjct: 198 ALVWCDSSAAVAVAGNPVLHSKFKHVELDLFFVREKIAQGLFQVGHV 244
>dbj|GAU19342.1| hypothetical protein TSUD_336290 [Trifolium subterraneum]
Length = 1442
Score = 125 bits (315), Expect(3) = 1e-44
Identities = 61/108 (56%), Positives = 80/108 (74%), Gaps = 3/108 (2%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSN---YNITSYADADWASDVDDKRSTSSLCT 308
PLD+HWKAVKRILRYL GT GL I+ +++ +Y+DADWA+D DD+RSTS C
Sbjct: 1249 PLDSHWKAVKRILRYLKGTLHYGLCISPSLTGPPFSLRAYSDADWATDQDDRRSTSGSCI 1308
Query: 307 FLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKL 164
+ G L+SWSSKK V+RSST +EYRS+A T +++WI SLLQEL++
Sbjct: 1309 YFGPNLVSWSSKKQQLVARSSTEAEYRSMANTTADLLWIQSLLQELQV 1356
Score = 56.2 bits (134), Expect(3) = 1e-44
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = -2
Query: 134 DNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
DN AV L+ NPV HSRTKH+ELD+HF+RE V++K + + HV A
Sbjct: 1366 DNLSAVALSHNPVLHSRTKHMELDIHFVRERVISKQLHVLHVPA 1409
Score = 47.4 bits (111), Expect(3) = 1e-44
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L +A ++ + + SPM++T L DA LY +VGALQYVT+T P+I F
Sbjct: 1183 LCKAKMENSNPIGSPMVSTCRLSKIGTDVFSDATLYRSVVGALQYVTLTRPDIAF 1237
>gb|PNX93258.1| histone deacetylase, partial [Trifolium pratense]
Length = 1438
Score = 124 bits (310), Expect(3) = 1e-44
Identities = 59/107 (55%), Positives = 80/107 (74%), Gaps = 3/107 (2%)
Frame = -3
Query: 481 YPLDNHWKAVKRILRYLAGTKKLGLKITSCSN---YNITSYADADWASDVDDKRSTSSLC 311
+PL++HWKAVKRILRYL GT GL ++ S+ +++ +Y+DADWA+D DD+RSTS C
Sbjct: 1252 HPLESHWKAVKRILRYLQGTISHGLLLSPSSSSPPFSLRAYSDADWATDQDDRRSTSGSC 1311
Query: 310 TFLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQEL 170
+ G L+SW SKK V+RSST +EYRS+A T E++WI SLL+EL
Sbjct: 1312 IYFGSNLVSWGSKKQPLVARSSTEAEYRSMANTTAELLWIQSLLKEL 1358
Score = 58.5 bits (140), Expect(3) = 1e-44
Identities = 27/50 (54%), Positives = 36/50 (72%)
Frame = -2
Query: 152 PSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
P + DN AV LA NP+ HSRTKH+ELD+HF+RE V++K + + HV A
Sbjct: 1364 PPTLLCDNLSAVSLAHNPILHSRTKHIELDIHFVREKVLSKQLQVLHVPA 1413
Score = 47.0 bits (110), Expect(3) = 1e-44
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L + +D K + SPM++T L + + D LY VGALQY T+T P+I F
Sbjct: 1187 LVKTNMDNCKPIGSPMVSTCRLSKFGTDALSDPSLYRSTVGALQYATLTRPDIAF 1241
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 133 bits (334), Expect(3) = 1e-44
Identities = 64/108 (59%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKIT---SCSNYNITSYADADWASDVDDKRSTSSLCT 308
P++ HWK VKRILRYL GT K GL T S S++N+T++ DADWA+D +D+RSTS+ C
Sbjct: 1212 PMEEHWKVVKRILRYLKGTLKHGLVFTPARSSSSFNLTAFTDADWAADPNDRRSTSAACI 1271
Query: 307 FLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKL 164
+LG L+SW SKK L V+RSST +EYR+LAQ E++WI SLLQELK+
Sbjct: 1272 YLGPNLVSWWSKKQLLVARSSTEAEYRALAQAVTEVLWIQSLLQELKI 1319
Score = 54.3 bits (129), Expect(3) = 1e-44
Identities = 23/46 (50%), Positives = 35/46 (76%)
Frame = -2
Query: 146 IVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
+V DN+ V L+ NPV HSR+KH+ELD+ F+RE V++K +V+ H+
Sbjct: 1325 MVLCDNQSTVALSHNPVLHSRSKHMELDIFFVREKVISKALVVSHI 1370
Score = 42.0 bits (97), Expect(3) = 1e-44
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L++ ++ +KG+++PMI L G D LY +VGALQY T+T P I F
Sbjct: 1147 LTKVKMEDSKGISTPMIGGQQLAK-TGTLFNDPTLYRSVVGALQYATITRPEIAF 1200
>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 123 bits (308), Expect(3) = 1e-44
Identities = 63/109 (57%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Frame = -3
Query: 481 YPLDNHWKAVKRILRYLAGTKKLGLKI---TSCSNYNITSYADADWASDVDDKRSTSSLC 311
+PL +HW AVKRILRYL GT GL++ +S S+ +I +Y DADWASD DD+RSTS
Sbjct: 1214 HPLTHHWAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGAS 1273
Query: 310 TFLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKL 164
FLG L+SW SKK V+RSST +EYRSLA T E+ WI +LL ELK+
Sbjct: 1274 IFLGPNLVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKV 1322
Score = 55.8 bits (133), Expect(3) = 1e-44
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -2
Query: 185 LIART*IEHKRPSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVS 6
L++ + H P I++ DN V LA NPV H+RTKH+ELDL F+RE V K + + HV
Sbjct: 1316 LLSELKVTHSTP-IIFCDNLSTVALAHNPVLHARTKHMELDLFFVREKVAAKCLQVVHVP 1374
Query: 5 A 3
A
Sbjct: 1375 A 1375
Score = 50.4 bits (119), Expect(3) = 1e-44
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L+R ++G+K ++SPMI+ L + DA LY +VGALQY T+T P I+F
Sbjct: 1149 LNRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISF 1203
>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1073
Score = 123 bits (308), Expect(3) = 1e-44
Identities = 63/109 (57%), Positives = 78/109 (71%), Gaps = 3/109 (2%)
Frame = -3
Query: 481 YPLDNHWKAVKRILRYLAGTKKLGLKI---TSCSNYNITSYADADWASDVDDKRSTSSLC 311
+PL +HW AVKRILRYL GT GL++ +S S+ +I +Y DADWASD DD+RSTS
Sbjct: 879 HPLTHHWAAVKRILRYLKGTTSWGLRLQPASSSSSLSIHAYCDADWASDPDDRRSTSGAS 938
Query: 310 TFLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKL 164
FLG L+SW SKK V+RSST +EYRSLA T E+ WI +LL ELK+
Sbjct: 939 IFLGPNLVSWWSKKQTVVARSSTEAEYRSLALATTEVTWIQTLLSELKV 987
Score = 55.8 bits (133), Expect(3) = 1e-44
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -2
Query: 185 LIART*IEHKRPSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVS 6
L++ + H P I++ DN V LA NPV H+RTKH+ELDL F+RE V K + + HV
Sbjct: 981 LLSELKVTHSTP-IIFCDNLSTVALAHNPVLHARTKHMELDLFFVREKVAAKCLQVVHVP 1039
Query: 5 A 3
A
Sbjct: 1040 A 1040
Score = 50.4 bits (119), Expect(3) = 1e-44
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L+R ++G+K ++SPMI+ L + DA LY +VGALQY T+T P I+F
Sbjct: 814 LNRTDMEGSKPISSPMISGSKLSKVGSEDFLDASLYRSVVGALQYATITRPEISF 868
>gb|PNX99662.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1046
Score = 122 bits (305), Expect(3) = 1e-44
Identities = 61/115 (53%), Positives = 81/115 (70%), Gaps = 3/115 (2%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKI---TSCSNYNITSYADADWASDVDDKRSTSSLCT 308
PL +HW+AVKRILRYL T LGL + + S ++I +Y+D+DWASD+DD+RSTS C
Sbjct: 854 PLLSHWQAVKRILRYLLSTCHLGLLLQPSAAVSKFSIRAYSDSDWASDLDDRRSTSGSCI 913
Query: 307 FLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRGQAL 143
F G L+SWS+KK V+RSS +EYRS+A T E++WI SLL +LK+ I L
Sbjct: 914 FFGPNLVSWSAKKQSLVARSSAEAEYRSMAHTTSELLWIQSLLVDLKIPIHTPVL 968
Score = 57.0 bits (136), Expect(3) = 1e-44
Identities = 27/46 (58%), Positives = 35/46 (76%)
Frame = -2
Query: 146 IVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
++ DN AV +A NPV H+RTKHLELD+HF+RE V+ K + IQHV
Sbjct: 967 VLLCDNISAVMIAHNPVLHARTKHLELDIHFVRERVLAKDLSIQHV 1012
Score = 50.1 bits (118), Expect(3) = 1e-44
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L RA + AKG+++PM+++ L + + D + Y IVGALQYVT+T P I F
Sbjct: 788 LHRANMAEAKGISTPMVSSLKLSRFGTDTLPDPHEYRSIVGALQYVTLTRPEIAF 842
>gb|KZV54184.1| hypothetical protein F511_36903 [Dorcoceras hygrometricum]
Length = 544
Score = 128 bits (322), Expect(3) = 1e-44
Identities = 61/107 (57%), Positives = 76/107 (71%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
PL++HWKAVKRILRYL GT G+ + + ++ Y DADW SD DD+RS S C FLG
Sbjct: 293 PLESHWKAVKRILRYLCGTLNFGISLGRSRHLSLFGYCDADWGSDPDDRRSVSGFCWFLG 352
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNI 158
ISWSSKK VSRSST +EYRSLA T E++WI SLL EL++++
Sbjct: 353 GSPISWSSKKQSVVSRSSTEAEYRSLANATAELLWIRSLLTELQVSV 399
Score = 62.0 bits (149), Expect(3) = 1e-44
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = -2
Query: 146 IVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
++W DN + L+ANPV H+RTKH+ELDLHF+RE +++ V+ ++HV
Sbjct: 404 LLWCDNLSTIALSANPVLHARTKHIELDLHFVREKILSNVLSVRHV 449
Score = 38.5 bits (88), Expect(3) = 1e-44
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L R +D AK L +PM + L + + LY VGALQY+T+T P+I++
Sbjct: 227 LLRTKMDCAKPLPTPMSSGVTLSSQGSAAFEHPTLYRSTVGALQYLTITRPDISY 281
>gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifolium pratense]
Length = 476
Score = 128 bits (322), Expect(3) = 2e-44
Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 3/109 (2%)
Frame = -3
Query: 481 YPLDNHWKAVKRILRYLAGTKKLGLKITSCSN---YNITSYADADWASDVDDKRSTSSLC 311
+PL++HWKAVKRILRYL GT GL + S+ +++ +Y+DADWA+D DD+RSTS C
Sbjct: 282 HPLESHWKAVKRILRYLKGTVHYGLLLQPSSSSPPFSLRAYSDADWATDQDDRRSTSGSC 341
Query: 310 TFLGEILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKL 164
F G+ L+SW SKK V+RSST +EYRS+A T E++WI SLLQEL++
Sbjct: 342 IFFGQNLVSWGSKKQQLVARSSTEAEYRSMANTTAELLWIQSLLQELQV 390
Score = 56.2 bits (134), Expect(3) = 2e-44
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = -2
Query: 134 DNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHVSA 3
DN AV LA NP+ HSRTKH+ELD+HF+RE V++K + + HV A
Sbjct: 400 DNISAVSLAHNPILHSRTKHIELDIHFVREKVLSKHLHVLHVPA 443
Score = 43.9 bits (102), Expect(3) = 2e-44
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPIQDAYLYMQIVGALQYVTMTSPNITF 498
L++ ++ K + SPM+ + L + +QD LY VGALQY T+T P+I +
Sbjct: 217 LNKTKMENCKPIGSPMVNSCRLSKFGTDSMQDPSLYRSTVGALQYATITRPDIAY 271
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gb|AAP52036.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1058
Score = 121 bits (303), Expect(3) = 2e-44
Identities = 58/109 (53%), Positives = 76/109 (69%)
Frame = -3
Query: 478 PLDNHWKAVKRILRYLAGTKKLGLKITSCSNYNITSYADADWASDVDDKRSTSSLCTFLG 299
P HW VKRILRY+ GT LGLK+ S+ +++Y+DADWA +DDKRST FLG
Sbjct: 864 PTTVHWATVKRILRYVKGTLGLGLKVEKSSSNIVSAYSDADWADCLDDKRSTGGFAVFLG 923
Query: 298 EILISWSSKKHLTVSRSST*SEYRSLAQVTCEIMWIHSLLQELKLNIRG 152
LISW+++K TVSRSST +EY++LA T EIMW+ LL+EL ++ G
Sbjct: 924 SNLISWNARKQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPG 972
Score = 59.7 bits (143), Expect(3) = 2e-44
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = -2
Query: 167 IEHKRPSIVWVDNR*AVCLAANPVNHSRTKHLELDLHFLRENVMNKVIVIQHV 9
I H PS +W DN A L+ NPV H+RTKH+E+D HF+RE V K + +Q V
Sbjct: 968 ISHPGPSQLWCDNIGATYLSVNPVFHARTKHIEIDYHFVREQVAQKQLALQFV 1020
Score = 47.4 bits (111), Expect(3) = 2e-44
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Frame = -2
Query: 662 LSRAGIDGAKGLNSPMITTPALFNYEGQPI--QDAYLYMQIVGALQYVTMTSPNITF 498
+ R ++ K + +P+ T L YEG+ + +DA Y +VGALQY+T+T P+I+F
Sbjct: 796 VKRVSMENCKSVGTPLSTVEKLSAYEGEKLGEKDATQYRSVVGALQYLTLTRPDISF 852