BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00039203
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX86003.1| retrotransposon protein [Trifolium pratense]           234   2e-72
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]      205   4e-63
ref|XP_017251133.1| PREDICTED: uncharacterized mitochondrial pro...   207   2e-62
gb|AGH20682.1| reverse transcriptase, partial [Raphanus sativus]      202   5e-62
gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]      202   5e-62
gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halle...   202   5e-62
gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halle...   202   5e-62
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle...   202   5e-62
gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]      202   7e-62
gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]       201   1e-61
gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halle...   201   1e-61
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ...   214   2e-61
gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halle...   201   2e-61
gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halle...   201   2e-61
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c...   200   3e-61
gb|KYP48709.1| Retrovirus-related Pol polyprotein from transposo...   197   3e-61
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle...   200   4e-61
gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halle...   199   1e-60
gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halle...   199   1e-60
gb|PNX86396.1| putative LRR receptor-like protein kinase, partia...   203   1e-60

>gb|PNX86003.1| retrotransposon protein [Trifolium pratense]
          Length = 490

 Score =  234 bits (597), Expect = 2e-72
 Identities = 108/153 (70%), Positives = 133/153 (86%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           G+DFNETFAPVAR+ETIRT LA+A   EL+V+QLDVKSAFLNGELEEE+YV+QPQ F  K
Sbjct: 59  GVDFNETFAPVARMETIRTVLALAAQLELQVFQLDVKSAFLNGELEEEVYVKQPQGFEAK 118

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G E K+Y+L KALYGLKQAPRAWN+KID +F Q+GF KSP+EPSLY+K+NG++FL++CLY
Sbjct: 119 GKERKVYKLHKALYGLKQAPRAWNSKIDAYFLQNGFVKSPSEPSLYVKRNGANFLMVCLY 178

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLIY GTN   ++ FK+ MM ++EMTDLG+M
Sbjct: 179 VDDLIYAGTNPNMVQSFKEAMMKEYEMTDLGLM 211


>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  205 bits (521), Expect = 4e-63
 Identities = 92/153 (60%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A     +++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F + GF K P E +LYIK   +D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFNEKGFIKCPYEHALYIKTQNNDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    EDFKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLM 225


>ref|XP_017251133.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Daucus carota subsp. sativus]
          Length = 447

 Score =  207 bits (527), Expect = 2e-62
 Identities = 96/154 (62%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR++TIR   AIA   E K++Q+DVKSAFLNG LEEE+Y+EQPQ +V K
Sbjct: 80  GIDYDEVFAPVARVDTIRLLTAIAAQNEWKIFQMDVKSAFLNGYLEEEVYIEQPQGYVQK 139

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKN-GSDFLVICL 359
           G EDK+YRL+KALYGLKQAPRAWN ++DE+F+++GF KSP E +LY K N G D +++CL
Sbjct: 140 GQEDKVYRLKKALYGLKQAPRAWNTRVDEYFQKNGFVKSPYEHALYTKTNSGGDIMIVCL 199

Query: 360 YVDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           YVDD+I+ G N    +DFKK M ++FEMTD+G M
Sbjct: 200 YVDDMIFTGNNPGMFDDFKKVMTNEFEMTDIGQM 233


>gb|AGH20682.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  202 bits (514), Expect = 5e-62
 Identities = 92/153 (60%), Positives = 121/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A     K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F + GF K P E +LYIK   +D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTQIDKYFNEKGFIKCPYEHALYIKTQNNDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           V DLI+ G N    EDFKK+M  +FEMTD+G+M
Sbjct: 193 VVDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLM 225


>gb|AGH20680.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  202 bits (514), Expect = 5e-62
 Identities = 91/153 (59%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A     +++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KAL GLKQAPRAWN +ID++F++ GF K P E +LYIK   +D L+ CLY
Sbjct: 133 GEEDKVLRLKKALNGLKQAPRAWNTRIDKYFKEKGFIKCPYEHALYIKTQNNDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    EDFKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLM 225


>gb|AFK88547.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  202 bits (514), Expect = 5e-62
 Identities = 91/153 (59%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AFK88543.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  202 bits (514), Expect = 5e-62
 Identities = 91/153 (59%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
 gb|AFK88545.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  202 bits (514), Expect = 5e-62
 Identities = 91/153 (59%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AGH20681.1| reverse transcriptase, partial [Raphanus sativus]
          Length = 315

 Score =  202 bits (513), Expect = 7e-62
 Identities = 91/153 (59%), Positives = 121/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A     K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQKSWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +I+++F+   F K P E +LYIK   +D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRINKYFKDKSFIKCPYEHALYIKTQNNDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    EDFKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLM 225


>gb|AGH20671.1| reverse transcriptase, partial [Thlaspi arvense]
          Length = 315

 Score =  201 bits (512), Expect = 1e-61
 Identities = 89/153 (58%), Positives = 123/153 (80%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A     +++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNRWRIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK   ++ L+ CLY
Sbjct: 133 GKEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKSFIKCPYEHALYIKTQNNNILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G+N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGSNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AFK88544.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  201 bits (511), Expect = 1e-61
 Identities = 90/153 (58%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPR+WN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRSWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
          Length = 1333

 Score =  214 bits (545), Expect = 2e-61
 Identities = 98/154 (63%), Positives = 127/154 (82%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3    GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
            G+DF+ETF+PVAR ET+R  LA+A    L VYQ DVKSAFLNG+LEEE+YV QPQ F++ 
Sbjct: 893  GVDFDETFSPVARFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMIT 952

Query: 183  GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSD-FLVICL 359
            G+E+K+Y+LRKALYGLKQAPRAW +KID FF+ SGF++S NEP+LY+KK G+D FL++CL
Sbjct: 953  GNENKVYKLRKALYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCL 1012

Query: 360  YVDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
            YVDD+IY G++   + DFK  MM  FEM+DLG++
Sbjct: 1013 YVDDMIYIGSSKSLVNDFKSNMMRNFEMSDLGLL 1046


>gb|AFK88549.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  201 bits (510), Expect = 2e-61
 Identities = 90/153 (58%), Positives = 121/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKS FLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSTFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AFK88546.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  201 bits (510), Expect = 2e-61
 Identities = 90/153 (58%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAP+AR+ET+R  +++A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPIARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLM 225


>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
          Length = 315

 Score =  200 bits (509), Expect = 3e-61
 Identities = 90/153 (58%), Positives = 121/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A     K++Q+DVKSAFLNGEL+EE+Y+EQPQ +VVK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNVWKIHQMDVKSAFLNGELDEEVYIEQPQGYVVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RLRKALYGLKQAPRAW+ +ID++F++  F K P E +LYIK   +D L+ CLY
Sbjct: 133 GEEDKVLRLRKALYGLKQAPRAWSTRIDKYFKEKNFIKCPYEHALYIKTQNNDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           +DDLI+   N    EDFK++M  +FEMTD+G+M
Sbjct: 193 IDDLIFTNNNPNMFEDFKQEMTKEFEMTDIGLM 225


>gb|KYP48709.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 212

 Score =  197 bits (500), Expect = 3e-61
 Identities = 95/153 (62%), Positives = 119/153 (77%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           G+D+NETFAPV  ++TIR  +A+A +    +YQLDVKSAFLNG LEEEIYVEQP  FV+K
Sbjct: 53  GVDYNETFAPVTILDTIRALIALAAHKGWNIYQLDVKSAFLNGILEEEIYVEQPPGFVMK 112

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G E K+ RL+KALYGLKQAPRAW +KID++F   GF++S +EP+LYIK  G   L++ LY
Sbjct: 113 GHEGKVLRLKKALYGLKQAPRAWYSKIDQYFTDHGFRRSKSEPTLYIKTQGQHTLLLSLY 172

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLIY GTN   + +FK+ MM  FEMTDLG+M
Sbjct: 173 VDDLIYTGTNTNMMMEFKEDMMKTFEMTDLGLM 205


>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  200 bits (508), Expect = 4e-61
 Identities = 90/153 (58%), Positives = 122/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +I+++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRINKYFKKKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AFK88548.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  199 bits (505), Expect = 1e-60
 Identities = 89/153 (58%), Positives = 121/153 (79%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  +++A   + K++Q+DVKSAFLNG+ EEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDFEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G E+K+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK    D L+ CLY
Sbjct: 133 GEENKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDDILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|AFK88541.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
           gemmifera]
          Length = 315

 Score =  199 bits (505), Expect = 1e-60
 Identities = 90/153 (58%), Positives = 120/153 (78%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           GID++E FAPVAR+ET+R  + +A   + K++Q+DVKSAFLNG+LEEE+Y+EQPQ ++VK
Sbjct: 73  GIDYDEVFAPVARLETVRLIILLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVK 132

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGSDFLVICLY 362
           G EDK+ RL+KALYGLKQAPRAWN +ID++F++  F K P E +LYIK      L+ CLY
Sbjct: 133 GEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKDGILIACLY 192

Query: 363 VDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           VDDLI+ G N    E+FKK+M  +FEMTD+G+M
Sbjct: 193 VDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLM 225


>gb|PNX86396.1| putative LRR receptor-like protein kinase, partial [Trifolium
           pratense]
          Length = 466

 Score =  203 bits (516), Expect = 1e-60
 Identities = 100/154 (64%), Positives = 122/154 (79%), Gaps = 1/154 (0%)
 Frame = +3

Query: 3   GIDFNETFAPVARIETIRTALAIATNFELKVYQLDVKSAFLNGELEEEIYVEQPQRFVVK 182
           G+D+NETFAPVAR++TIR  +A++      +YQLDVKSAFLNG LEEEIYVEQPQ FVVK
Sbjct: 86  GVDYNETFAPVARLDTIRALIALSAQKGWSIYQLDVKSAFLNGILEEEIYVEQPQGFVVK 145

Query: 183 GSEDKMYRLRKALYGLKQAPRAWNNKIDEFFRQSGFQKSPNEPSLYIKKNGS-DFLVICL 359
           G+EDK+ RLRKALYGLKQAPRAW ++ID++F   GF++S +EP+LYIK  G  D L++ L
Sbjct: 146 GNEDKVLRLRKALYGLKQAPRAWYSRIDQYFMDRGFRRSKSEPTLYIKTQGQYDTLIVSL 205

Query: 360 YVDDLIYFGTNGKQIEDFKKQMMSKFEMTDLGMM 461
           YVDDLIY G N   I  FK+ MM  FEMTDLG+M
Sbjct: 206 YVDDLIYTGNNITLINGFKEDMMKTFEMTDLGLM 239