BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00039165
         (840 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP09717.1| unnamed protein product [Coffea canephora]            116   1e-25
emb|CDP00431.1| unnamed protein product [Coffea canephora]            113   2e-25
emb|CDP14470.1| unnamed protein product [Coffea canephora]            115   4e-25
gb|OMO67492.1| reverse transcriptase [Corchorus capsularis]           101   3e-20
dbj|GAU34369.1| hypothetical protein TSUD_217090 [Trifolium subt...   100   4e-20
gb|PNY07715.1| ribonuclease H [Trifolium pratense]                    100   5e-20
ref|XP_021814681.1| uncharacterized protein LOC110757394 [Prunus...    97   8e-20
ref|XP_021800961.1| uncharacterized protein LOC110745195 [Prunus...    96   1e-19
gb|OEL23816.1| hypothetical protein BAE44_0015165, partial [Dich...    94   2e-19
dbj|GAU39350.1| hypothetical protein TSUD_56760 [Trifolium subte...    99   2e-19
ref|XP_023918903.1| uncharacterized protein LOC112030449 [Quercu...    94   3e-19
ref|XP_008242862.1| PREDICTED: uncharacterized protein LOC103341...    98   4e-19
gb|OMO95972.1| reverse transcriptase [Corchorus olitorius]             97   4e-19
gb|PRQ16242.1| putative ribonuclease H-like domain, reverse tran...    97   4e-19
ref|XP_012835792.1| PREDICTED: uncharacterized protein LOC105956...    97   5e-19
gb|POF05077.1| receptor-like protein kinase feronia [Quercus suber]    97   9e-19
gb|OMO52067.1| reverse transcriptase [Corchorus capsularis]            96   1e-18
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]            96   1e-18
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                     96   1e-18
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]            96   1e-18

>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score =  116 bits (290), Expect = 1e-25
 Identities = 58/161 (36%), Positives = 79/161 (49%), Gaps = 12/161 (7%)
 Frame = +3

Query: 6   ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGR------- 164
           I  +P+   G  D   W H+ SG YTV S YK++ Q         E+S H GR       
Sbjct: 241 ILDIPISIAGREDSNYWLHSGSGTYTVNSGYKALCQ---------ETSQHKGRRDNEAGT 291

Query: 165 -----NHAMWKRTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEET 329
                N   WK  W+L VK K+KHF+WR ++ +LP    +  R  +  P C  CGE EE+
Sbjct: 292 SSANSNEKQWKWLWKLKVKSKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEES 351

Query: 330 IMHIFFHCERAARFWKIAPLCWKEPNSEQESFKEWWTFITE 452
           I H+FF C RA   WK+AP+ W     +  +   WW  + E
Sbjct: 352 IEHLFFQCSRAQEVWKMAPIQWDGLTEQTRNILVWWNSMLE 392


>emb|CDP00431.1| unnamed protein product [Coffea canephora]
          Length = 344

 Score =  113 bits (282), Expect = 2e-25
 Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
 Frame = +3

Query: 6   ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQ---AQELQSDHPESSDHHGRNHAM 176
           I  +P+      D   W H  +G+++V+S Y+ + +   + E  +   + S +   N  +
Sbjct: 123 ILKIPISLSRSGDMHFWTHCKNGEFSVKSCYQVLLKEDRSMERGAKGEDGSSYDDSNKQI 182

Query: 177 WKRTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCE 356
           WK  W L +K K+K F+WRCI+N L  +  +  R  + +P C  CG+  ETI HI FHC 
Sbjct: 183 WKTLWSLNIKHKIKLFIWRCITNTLTARETIFRRTKQGSPICSRCGDGMETIEHILFHCH 242

Query: 357 RAARFWKIAPLCWKEPNSEQESFKEWWTFITE 452
           +A + WK+AP+ W    ++   FK+WW  +++
Sbjct: 243 QAQKVWKLAPIQWDGIQNQTGCFKKWWAALSQ 274


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  115 bits (287), Expect = 4e-25
 Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 6/157 (3%)
 Frame = +3

Query: 6   ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSV----TQAQELQSDH--PESSDHHGRN 167
           I ++PL   G  D   W HN  G YTV S YK +    T  +++  +   P  +    ++
Sbjct: 283 ILNIPLSLMGREDNYYWQHNPGGIYTVSSGYKCIMKERTNVKQIAPEEAGPSITGEDQQS 342

Query: 168 HAMWKRTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFF 347
             MW   W+L +K K+K F+W+CI+  LP +  +  +     P C+ CGE++ET+ H+  
Sbjct: 343 RQMWTTLWKLNIKHKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLML 402

Query: 348 HCERAARFWKIAPLCWKEPNSEQESFKEWWTFITEVK 458
           +C+ + + WK AP+ W     ++  F+ WW  I+E +
Sbjct: 403 NCQHSQQVWKAAPIQWDGAMDQKGDFRRWWIRISEAR 439


>gb|OMO67492.1| reverse transcriptase [Corchorus capsularis]
          Length = 1726

 Score =  101 bits (251), Expect = 3e-20
 Identities = 46/124 (37%), Positives = 65/124 (52%)
 Frame = +3

Query: 3    AICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWK 182
            AIC +PL      D+ +W HN+SG+Y+V+S Y  +        +   +S  H  +H +WK
Sbjct: 1338 AICRIPLGVFEREDKRVWPHNTSGQYSVKSGYFILKNNMSSSQNPNRASSSHNVDHTIWK 1397

Query: 183  RTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERA 362
              W+L    K+K FLWRC  N LPT + L  R  + +  C  CG+ EETI HI   C+  
Sbjct: 1398 FIWKLTCPNKIKTFLWRCCRNALPTAMGLFKRNCRDSGLCSICGQGEETIEHILLTCDWT 1457

Query: 363  ARFW 374
               W
Sbjct: 1458 RGVW 1461


>dbj|GAU34369.1| hypothetical protein TSUD_217090 [Trifolium subterraneum]
          Length = 1295

 Score =  100 bits (250), Expect = 4e-20
 Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
 Frame = +3

Query: 6    ICSLPLPQ---EGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAM 176
            IC +P+     E   D + W     G Y+V+S Y ++ +    + + P  ++ H R    
Sbjct: 910  ICKIPISTHMTEDTEDTICWQGTKDGNYSVKSGYNAIMEWATSKPEQPGQANQHTRKDTE 969

Query: 177  WKRTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCE 356
            W + W+L    K  H +WR + N +P K  LI RG+     C  C ++ ET+ H F  C+
Sbjct: 970  WNKIWKLNNPPKQIHLIWRSLHNTIPVKANLITRGIICDTLCPSCNKSPETMEHTFLECD 1029

Query: 357  RAARFWKIAPLCWKEPNSEQESFKEWWTFITEVKREK 467
             A R W  +PL     N++  SF EW+ ++    +E+
Sbjct: 1030 WAKRVWFSSPLTINLNNTQCYSFSEWYNYMLNNTKEE 1066


>gb|PNY07715.1| ribonuclease H [Trifolium pratense]
          Length = 1567

 Score =  100 bits (249), Expect = 5e-20
 Identities = 47/143 (32%), Positives = 72/143 (50%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
            I  +PL      D + W     G YTV+S Y +  +   ++S   ++S++H ++   W +
Sbjct: 1170 ILQIPLSNTMTEDIISWQGTKDGNYTVKSGYNAQMEWANVESSQAQTSNNH-KDEPFWNK 1228

Query: 186  TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
             W + V  K  H LWR + N +P K  LI +G+ +   C  C +  ETI H+F HCE A 
Sbjct: 1229 IWNIKVPPKQIHLLWRIMHNAIPVKTNLIKKGILIDSLCPRCNKGPETIDHLFLHCEWAH 1288

Query: 366  RFWKIAPLCWKEPNSEQESFKEW 434
              W  +PL  K  N +  +F EW
Sbjct: 1289 LVWFYSPLTIKTTNIQLHTFHEW 1311


>ref|XP_021814681.1| uncharacterized protein LOC110757394 [Prunus avium]
          Length = 326

 Score = 97.4 bits (241), Expect = 8e-20
 Identities = 47/153 (30%), Positives = 75/153 (49%)
 Frame = +3

Query: 6   ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
           I ++P+   G RD+L+W   S+G Y V+S Y  +  A    +     S H   N  +WK 
Sbjct: 30  ILAIPIGPSGQRDKLVWPWTSNGLYLVKSGYHCLQSAHRYLAPGSSHSSHFISNR-IWKA 88

Query: 186 TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
            W +    K++ FLWRC+SN +PT++ L  R +  +P C  C + EE+I H  F C  A 
Sbjct: 89  VWSVRTLPKIRMFLWRCMSNAIPTRLNLFKRKITASPMCDLCDQYEESIEHTLFLCPWAQ 148

Query: 366 RFWKIAPLCWKEPNSEQESFKEWWTFITEVKRE 464
             W  +P+  +       +   W   I +++ E
Sbjct: 149 AVWFGSPMTLRIDTQSFSTLDVWLNNILDLRTE 181


>ref|XP_021800961.1| uncharacterized protein LOC110745195 [Prunus avium]
          Length = 250

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 8/149 (5%)
 Frame = +3

Query: 15  LPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDH--------PESSDHHGRNH 170
           + L + G  DR +W    +G +TV+S Y+    A EL S+           S D  GR  
Sbjct: 1   MALSRFGCPDRWMWHFTKNGLFTVKSGYRV---AVELDSNGLLGRRGFGGTSDDRGGRR- 56

Query: 171 AMWKRTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFH 350
            +WK  W L V GK++HF+WRC  + +  +  L  RGV++ P C  C ++EET+ H+ FH
Sbjct: 57  -LWKSIWELNVVGKIRHFVWRCCKDYIAVRSNLRRRGVQVDPACPSCQQHEETVAHLLFH 115

Query: 351 CERAARFWKIAPLCWKEPNSEQESFKEWW 437
           C  A  FW   PL     + +  +F + W
Sbjct: 116 CHYARLFWFACPLQLDVRSLQGGTFADIW 144


>gb|OEL23816.1| hypothetical protein BAE44_0015165, partial [Dichanthelium
           oligosanthes]
          Length = 196

 Score = 93.6 bits (231), Expect = 2e-19
 Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
 Frame = +3

Query: 36  LRDRLIWCHNSSGKYTVQSAY---KSVTQAQELQSDHPESSDHHGRNHAMWKRTWRLGVK 206
           + D L W    +G Y+VQSAY   K     +   S  PESS + G   A WK  W++ + 
Sbjct: 1   MEDTLAWAFEKNGVYSVQSAYILLKDEEMREIRASSVPESSSNSG---AWWKLLWKMKIP 57

Query: 207 GKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAARFWK-IA 383
            K++ F WR I N LP K +L  R V    +C+ CG ++ET+ H+ F C  A RFW+ I 
Sbjct: 58  SKVRIFWWRAIHNFLPVKCELFRRHVAKESFCEECGHSQETVFHVAFECTAALRFWQCIR 117

Query: 384 PLCWKEP 404
            +  K+P
Sbjct: 118 EITGKKP 124


>dbj|GAU39350.1| hypothetical protein TSUD_56760 [Trifolium subterraneum]
          Length = 913

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 45/143 (31%), Positives = 72/143 (50%)
 Frame = +3

Query: 15  LPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKRTWR 194
           +PL      D + W     G YTV+S Y ++    E  ++   SS+ + R+   W + W+
Sbjct: 537 IPLSPYSTEDTICWQGTKDGNYTVKSGYNAIID-WESNNNEQGSSNLYSRHDTNWSKFWK 595

Query: 195 LGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAARFW 374
           L    K  H +WR + N LP K  LI RG+     C  C ++ ET+ H+F +CE A + W
Sbjct: 596 LQNPPKQLHLIWRTLHNALPVKANLITRGIICDSLCPRCNQSPETVDHVFLNCEWAQKVW 655

Query: 375 KIAPLCWKEPNSEQESFKEWWTF 443
             +PL  K  N+   +F +W+ +
Sbjct: 656 FSSPLTLKTNNNHTHNFNDWYNY 678


>ref|XP_023918903.1| uncharacterized protein LOC112030449 [Quercus suber]
          Length = 230

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 47/143 (32%), Positives = 74/143 (51%)
 Frame = +3

Query: 3   AICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWK 182
           AI ++P+      D+ IW  +S+G ++V++AY    Q   +QS   ESS    ++ + WK
Sbjct: 47  AIKAIPISTNLPEDKQIWAWSSNGVFSVKNAYWVACQMSLVQS--MESSSDGSQDRSFWK 104

Query: 183 RTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERA 362
           R W++ V  K++HF WR   ++LP K  L+ R V     C  C    E  +H F+ C RA
Sbjct: 105 RIWQINVPHKIRHFAWRACRDILPLKTNLVKRNVLQVDICDECNVEAEDSIHFFWRCNRA 164

Query: 363 ARFWKIAPLCWKEPNSEQESFKE 431
              W  + L +    ++  SFKE
Sbjct: 165 KPMWSSSKLSFPNILNQLSSFKE 187


>ref|XP_008242862.1| PREDICTED: uncharacterized protein LOC103341160 [Prunus mume]
          Length = 872

 Score = 97.8 bits (242), Expect = 4e-19
 Identities = 47/153 (30%), Positives = 76/153 (49%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
            I ++P+   G RD+L+W   S+G Y+V+S Y+ +  A    +     S H   N  +WK 
Sbjct: 564  ILAIPIGPSGQRDKLVWPWTSNGLYSVKSGYQCLQSAHRYLASGSSHSSHFISNR-IWKA 622

Query: 186  TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
             W +    K++ FLWRC+SN +PT+V L  R +  +P C  C + EE+I H    C  A 
Sbjct: 623  IWSVRTLPKIRMFLWRCMSNAIPTRVNLFRRKITASPMCGLCDQYEESIEHALLLCPWAQ 682

Query: 366  RFWKIAPLCWKEPNSEQESFKEWWTFITEVKRE 464
              W  +P+  +       +   W   I +++ E
Sbjct: 683  AVWFGSPMTLRIDTQSFSTLDVWLNSILDLRTE 715


>gb|OMO95972.1| reverse transcriptase [Corchorus olitorius]
          Length = 464

 Score = 97.1 bits (240), Expect = 4e-19
 Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 1/146 (0%)
 Frame = +3

Query: 3   AICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAM-W 179
           AI  +P+  E + DR+ W     G Y+V+S YK +      + D+ +SS+  G  +   W
Sbjct: 116 AIKKIPIGSEQVPDRITWHFTRDGNYSVKSGYKLLASETIQEEDNAQSSN--GMQYCRTW 173

Query: 180 KRTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCER 359
           ++ W+L V  KL++FLWR   N++PTK  L+ R     P C  C E+ E++ HI F C  
Sbjct: 174 RKIWKLNVATKLQNFLWRACRNIIPTKENLVKRHCSYDPVCVRCNEDVESLEHILFFCPF 233

Query: 360 AARFWKIAPLCWKEPNSEQESFKEWW 437
           A   WK +   +         F +WW
Sbjct: 234 AQAAWKASYFSYSPRREGFVGFLKWW 259


>gb|PRQ16242.1| putative ribonuclease H-like domain, reverse transcriptase
           zinc-binding domain-containing protein [Rosa chinensis]
          Length = 606

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 51/151 (33%), Positives = 79/151 (52%)
 Frame = +3

Query: 3   AICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWK 182
           AICS+PLP     D+ +W +  +G YTV+S Y+ + Q   ++    E S  +  +  +W+
Sbjct: 230 AICSIPLPITPCSDKQVWHYTKNGTYTVKSGYQ-LAQTLRIRGAGQEGSSTNQLD-LVWQ 287

Query: 183 RTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERA 362
             W+L +   +K FLWR I  +LPT + L  R +  +  C  C   EETI+H F+ C +A
Sbjct: 288 VMWKLKIPEGVKVFLWRVIHEILPTALLLQRRHLLASSVCSRCQGEEETILHAFWSCSKA 347

Query: 363 ARFWKIAPLCWKEPNSEQESFKEWWTFITEV 455
              WK+ P          E+FK+ + F T V
Sbjct: 348 REVWKLTPFKSAVGRGHYENFKDMFRFATSV 378


>ref|XP_012835792.1| PREDICTED: uncharacterized protein LOC105956483 [Erythranthe guttata]
          Length = 1012

 Score = 97.4 bits (241), Expect = 5e-19
 Identities = 45/144 (31%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSD-HPESSDHHGRNHAMWK 182
            I ++P+     +DRL+W ++ SGK+TV+S Y ++   +   ++ HP  +  +     +WK
Sbjct: 647  ILAIPIGSSLAKDRLVWHYSRSGKFTVKSCYHNIMTRRCTSTEIHPLGTSSNNEAKDLWK 706

Query: 183  RTWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERA 362
              W   +  K+K F+WR + +++PTKV L  R + M P+C  CG   ET  H    C   
Sbjct: 707  YLWHSSIPPKVKIFVWRAVWDIIPTKVALFRRHITMNPFCALCGTTTETTTHALIGCRGL 766

Query: 363  ARFWKIAPLCWKEPNSEQESFKEW 434
               W+  P    +P  E  SF+ W
Sbjct: 767  PDVWQSHPF-HLDPTIEPISFRSW 789


>gb|POF05077.1| receptor-like protein kinase feronia [Quercus suber]
          Length = 827

 Score = 96.7 bits (239), Expect = 9e-19
 Identities = 51/139 (36%), Positives = 73/139 (52%)
 Frame = +3

Query: 6   ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
           I S+PL Q  + D+L+W HN SG YTV+S YK ++Q   + SDH       G +  +WK 
Sbjct: 435 IQSIPLSQRPVEDKLVWSHNPSGVYTVKSGYKLLSQGVVV-SDHRAQ----GVDKDVWKV 489

Query: 186 TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
            W L V+ K+++F+WR I N +P K  L+ R V +   C  C  + E ++H  + C    
Sbjct: 490 VWGLKVQNKIRNFIWRAIRNSIPVKTNLVKRKVLVDDSCDHCHHDPEDVLHALWQCPLLD 549

Query: 366 RFWKIAPLCWKEPNSEQES 422
             W   P CW    S Q S
Sbjct: 550 PVWSSNP-CWDFRASSQFS 567


>gb|OMO52067.1| reverse transcriptase [Corchorus capsularis]
          Length = 868

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 54/146 (36%), Positives = 82/146 (56%), Gaps = 2/146 (1%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
            I  LP+P+   RD LIW  NS+G +TV+S Y      Q+L  D     + +  +  +W+R
Sbjct: 677  ILCLPIPRSPGRDTLIWDGNSTGNFTVKSTY--FVARQQLGYD----ININVESRKLWRR 730

Query: 186  TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
             W   +  K+++F WR I N+LP K  L  RG+ +   C  CG +EE++ HIFF+C  + 
Sbjct: 731  VWYSSIPPKIRYFTWRLIGNLLPLKANLQQRGMDVDGLCVVCGLSEESVGHIFFNCCFSR 790

Query: 366  RFWK-IAPLCWKEPNSEQ-ESFKEWW 437
            R W+ +AP  W  P  EQ ++  E+W
Sbjct: 791  RIWETVAP--WLLPYIEQLQTTNEFW 814


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 43/147 (29%), Positives = 78/147 (53%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
            I  +P+  +   D L W     G Y+V+S Y+++ +  +   ++  +S +      +WK 
Sbjct: 632  IQQIPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSME--IWKV 689

Query: 186  TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
             W+L V  K  HF+WRC+SN +P K +L  +G++  P C  C  + ETI H+F  C+ A 
Sbjct: 690  LWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAK 749

Query: 366  RFWKIAPLCWKEPNSEQESFKEWWTFI 446
            + W  +PL     +++   F +W+ ++
Sbjct: 750  KVWFASPLTLNLNSNQLTEFYDWFNYM 776


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 43/147 (29%), Positives = 78/147 (53%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
            I  +P+  +   D L W     G Y+V+S Y+++ +  +   ++  +S +      +WK 
Sbjct: 632  IQQIPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSME--IWKV 689

Query: 186  TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
             W+L V  K  HF+WRC+SN +P K +L  +G++  P C  C  + ETI H+F  C+ A 
Sbjct: 690  LWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAK 749

Query: 366  RFWKIAPLCWKEPNSEQESFKEWWTFI 446
            + W  +PL     +++   F +W+ ++
Sbjct: 750  KVWFASPLTLNLNSNQLTEFYDWFNYM 776


>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1070

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 43/147 (29%), Positives = 78/147 (53%)
 Frame = +3

Query: 6    ICSLPLPQEGLRDRLIWCHNSSGKYTVQSAYKSVTQAQELQSDHPESSDHHGRNHAMWKR 185
            I  +P+  +   D L W     G Y+V+S Y+++ +  +   ++  +S +      +WK 
Sbjct: 786  IQQIPILDKTQSDILTWDGTRDGHYSVKSGYQAIMEWAKNSDNNNATSSNSSME--IWKV 843

Query: 186  TWRLGVKGKLKHFLWRCISNVLPTKVQLIHRGVKMTPWCQFCGENEETIMHIFFHCERAA 365
             W+L V  K  HF+WRC+SN +P K +L  +G++  P C  C  + ETI H+F  C+ A 
Sbjct: 844  LWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGIRCDPLCPRCLNHVETIQHVFLECDWAK 903

Query: 366  RFWKIAPLCWKEPNSEQESFKEWWTFI 446
            + W  +PL     +++   F +W+ ++
Sbjct: 904  KVWFASPLTLNLNSNQLTEFYDWFNYM 930