BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00039126
         (1395 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]           375   e-116
ref|XP_015619246.1| PREDICTED: uncharacterized protein LOC107279...   368   e-110
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   368   e-110
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           355   e-110
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...   365   e-110
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...   365   e-110
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...   365   e-110
ref|XP_012067550.1| uncharacterized protein LOC105630354 [Jatrop...   359   e-109
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           353   e-109
gb|PNX71213.1| ribonuclease H [Trifolium pratense]                    354   e-109
ref|XP_012079594.1| uncharacterized protein LOC105640000 [Jatrop...   359   e-109
gb|PNX71533.1| ribonuclease H [Trifolium pratense]                    349   e-108
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    353   e-108
ref|XP_012078066.1| uncharacterized protein LOC105638813 [Jatrop...   351   e-108
gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]           353   e-108
gb|PRQ21155.1| putative RNA-directed DNA polymerase [Rosa chinen...   346   e-108
emb|CDP14470.1| unnamed protein product [Coffea canephora]            343   e-108
gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]           353   e-108
ref|XP_023878301.1| uncharacterized protein LOC111990748 [Quercu...   357   e-108
gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]           354   e-107

>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1068

 Score =  375 bits (962), Expect = e-116
 Identities = 182/443 (41%), Positives = 284/443 (64%), Gaps = 3/443 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GI++ + +P +THL FADDS+LF  A   +A ++ Q+L++Y  ASGQ+VS EKS V FS+
Sbjct: 633  GIQVARNAPKITHLLFADDSLLFARANQNEANTIIQVLNKYQLASGQMVSYEKSEVSFSR 692

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            N P   KN IC+ +   +    +RYLGLP++ GRSKKEVF +V+D ++K+V GW+ K LS
Sbjct: 693  NVPDIEKNIICNKIEVKAVTSHSRYLGLPVIFGRSKKEVFAFVQDRIWKKVKGWKEKCLS 752

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAWDRL 814
             AG+E LI+AV  A+P+++MSC+KIP G C +I  + ++FWWG + + K  +HW++WDRL
Sbjct: 753  KAGKETLIKAVAQAIPSYIMSCYKIPEGSCANIESMLSKFWWG-SSDQKNKIHWMSWDRL 811

Query: 813  VNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSSD 634
              +K KGGLGF+    FN A+L KQ WRL+ + + L+S++ K+KYFP+   L  K     
Sbjct: 812  GRAKNKGGLGFRGFSDFNKALLGKQCWRLMSNEDSLLSRVFKSKYFPRSCFLKSKCGYQP 871

Query: 633  SWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFK---PTLSGKIDLAGMRV 463
            S+ W+S   A   + LG+R+ +G+G+ + I + PW+P+  +FK   P  +   D     V
Sbjct: 872  SYAWRSLFNAKSVIDLGLRWTIGNGQQVKIWKDPWLPELSSFKVWSPVCNLDEDAV---V 928

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSK 283
            +EL+ V   +W ++L++ +F E +A  ILNIP+S     D  +W W++ G Y+V+SAY  
Sbjct: 929  AELIDVDLKKWKRELVMNSFNEFEANQILNIPLSWRLPDDKKVWSWERNGNYSVRSAYHL 988

Query: 282  RRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
             ++  L  +  P ++   G    +W  +WK++   ++K+F+WR + RI+PT  +L  +G+
Sbjct: 989  LKEETLRDIPEPSTAGNTG----IWKSIWKVQAPQRVKNFLWRVVKRILPTRCRLEQKGV 1044

Query: 102  EVDPICQICGFQNETLEHLFFQC 34
             +DPIC +C    ET EHLF  C
Sbjct: 1045 ALDPICPLCHDGEETQEHLFMHC 1067


>ref|XP_015619246.1| PREDICTED: uncharacterized protein LOC107279669 [Oryza sativa
            Japonica Group]
          Length = 1587

 Score =  368 bits (944), Expect = e-110
 Identities = 184/451 (40%), Positives = 279/451 (61%), Gaps = 3/451 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GIRIC+G+P V+HL FADDS++ C A   +A  ++ IL  Y   SGQ+++ +KS+V+FS 
Sbjct: 922  GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 981

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            NT    K  + + LN   +    RYLGLP+ +GRS+ ++F Y+++ +++R+ GW+ K LS
Sbjct: 982  NTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLS 1041

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWW-GCAKEGKMGLHWVAWDR 817
             AG+E+LI+AV  A+PTF M CF++   +C+ I ++ A++WW    K+ KM  HW++W++
Sbjct: 1042 RAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKM--HWLSWNK 1099

Query: 816  LVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSS 637
            L   K  GGLGF+D+ +FN AMLAKQ WRL+  P+ L S++L+AKYFP G     K  S+
Sbjct: 1100 LTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSN 1159

Query: 636  DSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSE 457
             S+ W+S  K +  L  G+ ++VGDG  INI   PWIP+  + KP      +L   +V E
Sbjct: 1160 VSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANLV-TKVEE 1218

Query: 456  LLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRR 277
            L+      W++ L+ + F E D   I +IP+  +   D+L WH+D +G +TVKSAY  +R
Sbjct: 1219 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKVQR 1277

Query: 276  QFKLESLDS--PGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
            + +  +  +  PG S         W KLWKL + GK+KHF+WR  +  +     L HRG+
Sbjct: 1278 EMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1337

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWK 10
            +VD  C +CG  NE   HLFF+C   + +W+
Sbjct: 1338 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1368


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  368 bits (944), Expect = e-110
 Identities = 184/451 (40%), Positives = 279/451 (61%), Gaps = 3/451 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GIRIC+G+P V+HL FADDS++ C A   +A  ++ IL  Y   SGQ+++ +KS+V+FS 
Sbjct: 922  GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 981

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            NT    K  + + LN   +    RYLGLP+ +GRS+ ++F Y+++ +++R+ GW+ K LS
Sbjct: 982  NTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLS 1041

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWW-GCAKEGKMGLHWVAWDR 817
             AG+E+LI+AV  A+PTF M CF++   +C+ I ++ A++WW    K+ KM  HW++W++
Sbjct: 1042 RAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKM--HWLSWNK 1099

Query: 816  LVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSS 637
            L   K  GGLGF+D+ +FN AMLAKQ WRL+  P+ L S++L+AKYFP G     K  S+
Sbjct: 1100 LTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSN 1159

Query: 636  DSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSE 457
             S+ W+S  K +  L  G+ ++VGDG  INI   PWIP+  + KP      +L   +V E
Sbjct: 1160 VSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANLV-TKVEE 1218

Query: 456  LLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRR 277
            L+      W++ L+ + F E D   I +IP+  +   D+L WH+D +G +TVKSAY  +R
Sbjct: 1219 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKVQR 1277

Query: 276  QFKLESLDS--PGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
            + +  +  +  PG S         W KLWKL + GK+KHF+WR  +  +     L HRG+
Sbjct: 1278 EMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1337

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWK 10
            +VD  C +CG  NE   HLFF+C   + +W+
Sbjct: 1338 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1368


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  355 bits (912), Expect = e-110
 Identities = 173/451 (38%), Positives = 274/451 (60%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            G+++ + +P +THL FADDS+LF  A   +A  +  IL  Y +ASGQLVSLEKS V FS+
Sbjct: 262  GLQVARNAPKITHLLFADDSLLFARANQKEAEVIINILQTYQTASGQLVSLEKSEVSFSR 321

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            N P   KN IC+ ++  +    ++YLGLP++ GRSKKE+F  V++ ++K++ GW+ K LS
Sbjct: 322  NLPTIEKNMICNKIDVKAVTNHSKYLGLPVIFGRSKKEIFASVQERIWKKIKGWKEKCLS 381

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAWDRL 814
             AG+E LI++V  A+P ++MSC+K+P G C++I  + A+FWWG   E +  +HWV+W++L
Sbjct: 382  RAGKETLIKSVAQAIPNYIMSCYKLPTGCCDNIEAMLAKFWWG-TTEKQRKIHWVSWNKL 440

Query: 813  VNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSSD 634
              +K KGGLGF+    FN A+L KQ WRL+ +P+ L++K+ K++YFP+   +        
Sbjct: 441  GKAKSKGGLGFRSFEDFNKALLGKQCWRLLQNPDSLLAKVFKSRYFPRSKFMDANVGYQP 500

Query: 633  SWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSEL 454
            S+ W+S   +   + +G R+ +G+GK ++I    W+P    FK             VS+L
Sbjct: 501  SYAWRSLCNSREVIDVGARWLIGNGKDVHIWNDKWLPAQDKFKVWSPVSNLAPNAMVSDL 560

Query: 453  LSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRRQ 274
            +++    W+K L+   F   +A+ ILNIP+S     D LIWHW+K G ++V+SAY    +
Sbjct: 561  INLETKMWDKNLVQNCFNSFEAEQILNIPLSWRLPADKLIWHWEKNGEFSVRSAYHMLSE 620

Query: 273  FKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGIEVD 94
             + ++     SS        +W  +WK+++   +K+F+WR    I+PT  +L  +GI +D
Sbjct: 621  IRNQNSPEASSS----RDHLLWKAIWKVKVPNCIKNFLWRLAKAILPTRSRLEKKGITLD 676

Query: 93   PICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
              C +C    E  EHLF  CP ++ +W  SP
Sbjct: 677  TTCPLCFNDIECNEHLFMHCPLSKQVWFSSP 707


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score =  365 bits (937), Expect = e-110
 Identities = 182/451 (40%), Positives = 278/451 (61%), Gaps = 3/451 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GIRIC+G+P V+HL FADDS++ C A   +A  ++ IL  Y   SGQ+++ +KS+V+FS 
Sbjct: 863  GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 922

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            NT    K  + + LN   +    +YLGLP+ +GRS+ ++F Y+++ +++R+ GW+ K LS
Sbjct: 923  NTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLS 982

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWW-GCAKEGKMGLHWVAWDR 817
             AG+E+LI+AV   +PTF M CF++   +C+ I ++ A++WW    K+ KM  HW++W++
Sbjct: 983  RAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKM--HWLSWNK 1040

Query: 816  LVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSS 637
            L   K  GGLGF+D+ +FN AMLAKQ WRL+  P+ L S++L+AKYFP G     K  S+
Sbjct: 1041 LTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSN 1100

Query: 636  DSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSE 457
             S+ W+S  K +  L  G+ ++VGDG  INI   PWIP+  + KP      +L   +V E
Sbjct: 1101 VSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANLV-TKVEE 1159

Query: 456  LLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRR 277
            L+      W++ L+ + F E D   I +IP+  +   D+L WH+D +G +TVKSAY  +R
Sbjct: 1160 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKVQR 1218

Query: 276  QFKLESLDS--PGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
            + +  +  +  PG S         W KLWKL + GK+KHF+WR  +  +     L HRG+
Sbjct: 1219 EMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1278

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWK 10
            +VD  C +CG  NE   HLFF+C   + +W+
Sbjct: 1279 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1309


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score =  365 bits (937), Expect = e-110
 Identities = 182/451 (40%), Positives = 278/451 (61%), Gaps = 3/451 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GIRIC+G+P V+HL FADDS++ C A   +A  ++ IL  Y   SGQ+++ +KS+V+FS 
Sbjct: 867  GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 926

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            NT    K  + + LN   +    +YLGLP+ +GRS+ ++F Y+++ +++R+ GW+ K LS
Sbjct: 927  NTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLS 986

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWW-GCAKEGKMGLHWVAWDR 817
             AG+E+LI+AV   +PTF M CF++   +C+ I ++ A++WW    K+ KM  HW++W++
Sbjct: 987  RAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKM--HWLSWNK 1044

Query: 816  LVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSS 637
            L   K  GGLGF+D+ +FN AMLAKQ WRL+  P+ L S++L+AKYFP G     K  S+
Sbjct: 1045 LTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSN 1104

Query: 636  DSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSE 457
             S+ W+S  K +  L  G+ ++VGDG  INI   PWIP+  + KP      +L   +V E
Sbjct: 1105 VSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRGWSRKPMTPRGANLV-TKVEE 1163

Query: 456  LLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRR 277
            L+      W++ L+ + F E D   I +IP+  +   D+L WH+D +G +TVKSAY  +R
Sbjct: 1164 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKVQR 1222

Query: 276  QFKLESLDS--PGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
            + +  +  +  PG S         W KLWKL + GK+KHF+WR  +  +     L HRG+
Sbjct: 1223 EMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGM 1282

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWK 10
            +VD  C +CG  NE   HLFF+C   + +W+
Sbjct: 1283 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1313


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score =  365 bits (938), Expect = e-110
 Identities = 182/451 (40%), Positives = 279/451 (61%), Gaps = 3/451 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GIRIC+G+P V+HL FADDS++ C A   +A  ++ IL  Y   SGQ+++ +KS+V+FS 
Sbjct: 895  GIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSP 954

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            NT    K  + + LN   +    +YLGLP+ +GRS+ ++F Y+++ +++R+ GW+ K LS
Sbjct: 955  NTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLS 1014

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWW-GCAKEGKMGLHWVAWDR 817
             AG+E+LI+AV  A+PTF M CF++   +C+ I ++ A++WW    K+ KM  HW++W++
Sbjct: 1015 RAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKM--HWLSWNK 1072

Query: 816  LVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSS 637
            L   K  GGLGF+D+ +FN AMLAKQ WRL+  P+ L S++L+AKYFP G     K  S+
Sbjct: 1073 LTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGDCFRPKQTSN 1132

Query: 636  DSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSE 457
             S+ W+S  K +  L  G+ +++GDG  INI   PWIP+  + KP      +L   +V E
Sbjct: 1133 VSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRGWSRKPMTPRGANLV-TKVEE 1191

Query: 456  LLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRR 277
            L+      W++ L+ + F E D   I +IP+  +   D+L WH+D +G +TVKSAY  +R
Sbjct: 1192 LIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVE-MEDVLAWHFDARGCFTVKSAYKVQR 1250

Query: 276  QFKLESLDS--PGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
            + +  +  +  PG S         W KLWKL + GK+KHF+WR  +  +     L HRG+
Sbjct: 1251 EMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGM 1310

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWK 10
            +VD  C +CG  NE   HLFF+C   + +W+
Sbjct: 1311 DVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQ 1341


>ref|XP_012067550.1| uncharacterized protein LOC105630354 [Jatropha curcas]
          Length = 1197

 Score =  359 bits (922), Expect = e-109
 Identities = 185/457 (40%), Positives = 273/457 (59%), Gaps = 4/457 (0%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G R     P ++HLFFADDS+LF  A+  +A  VK IL  Y  ASGQ V+  KS +L
Sbjct: 507  LIHGCRAAANCPRISHLFFADDSLLFFDASLDEARWVKDILGAYEVASGQSVNFGKSGLL 566

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FS      +K+DI + L   S    + YLGLP L+ +SK+++F ++++ ++KR+S W NK
Sbjct: 567  FSPCVSDTLKHDISAALGVFSPLNGSSYLGLPSLVMQSKRQIFNFLKERLWKRISSWNNK 626

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
            FLS AG+EV+++AV  A+P + M+ F++P  +CND+  +  +FWW   K    G++W++W
Sbjct: 627  FLSRAGREVMLKAVAQAIPNYCMNVFQLPTTLCNDLQVMMNRFWWNGNKFDGHGINWLSW 686

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
            DR+  SK  GG+GF+DL  FN A+L KQ WRL+   N L+ ++ KAKYFP+G  LS    
Sbjct: 687  DRMCVSKSGGGMGFRDLHCFNVALLGKQGWRLLTKTNTLLYRVFKAKYFPRGDFLSASAI 746

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
               S++WKS + +   L  G  ++VG+G++I++  SPWIPK   F P          MRV
Sbjct: 747  PGQSFVWKSILSSKQVLIQGSHWRVGNGQNIHVTSSPWIPKDDGFFPDDGQLFIPNAMRV 806

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAY-- 289
             +L   G   W+   ++  F   D + IL+IP+S  N  D +IWH+ KKG+YTVK+AY  
Sbjct: 807  CDLFVAGENRWDVNKLMNLFSIRDLRAILSIPLSIMNREDKIIWHFHKKGIYTVKTAYYE 866

Query: 288  --SKRRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLI 115
              +  R  +L S DS            +WN++W L +  K++ F+WR    I+PT  KL+
Sbjct: 867  IFNSLRHHQLPSNDS------------VWNRIWNLHVPPKIRDFMWRACRNILPTRCKLV 914

Query: 114  HRGIEVDPICQICGFQNETLEHLFFQCPRAQIIWKLS 4
             RGI V   C  C   NET +H+ F CPRA+ +W++S
Sbjct: 915  ERGIGVPSACLFCP-DNETSDHVLFACPRARDVWRIS 950


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  353 bits (907), Expect = e-109
 Identities = 173/454 (38%), Positives = 273/454 (60%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G+ IC  +P ++HLFFADDS++FC A   +  +++ I+  Y +ASGQLV+  KS ++
Sbjct: 306  LIHGVMICHEAPEISHLFFADDSLVFCRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMV 365

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FSK    +++ DI +IL        ++YLG+P+ +GRSKK++F ++++ ++K++ GW+ K
Sbjct: 366  FSKGVSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEK 425

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
             LS AG+  LI+AV  A+PT++MS F +P G+C+ + ++   FWWG + + +  +HW+ W
Sbjct: 426  HLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVCDQLEKMICNFWWGSSTDHRK-IHWIKW 484

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
              +   K +GG+GF+DL  FN+A+LAKQ WRL+  P+ L++KILKAKY+PKG  L    K
Sbjct: 485  STVCKHKMEGGIGFRDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYYPKGEFLKASHK 544

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
               S+ WKS ++A   +  G  + +G G+ INI E  WI +      T+S   +   ++V
Sbjct: 545  QQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKV 604

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSK 283
             EL+     +WN  +I + F   +A +I  IPI      DIL W   + G Y+VKS Y  
Sbjct: 605  KELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSGYQA 664

Query: 282  RRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
              ++   S ++  +S       ++W  LWKL +  K  HFIWRC++  IP   KL  +GI
Sbjct: 665  IMEWAKNSDNNNATSS--NSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGI 722

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
              DP+C  C    ET++H+F +C  A+ +W  SP
Sbjct: 723  RCDPLCPRCLNHVETIQHVFLECDWAKKVWFASP 756


>gb|PNX71213.1| ribonuclease H [Trifolium pratense]
          Length = 951

 Score =  354 bits (908), Expect = e-109
 Identities = 176/454 (38%), Positives = 272/454 (59%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G+++  G+P +THL FADDS+ FC AT  +A +V+ I+  Y  ASGQLV+++KS ++
Sbjct: 243  LIHGVKVANGAPEITHLLFADDSLFFCRATKQEATNVRNIILDYQRASGQLVNMQKSEII 302

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FSK  P  VK ++  IL        ++YLG+P  IGRSK+++F Y++D V+K++ GW+ K
Sbjct: 303  FSKMVPNEVKVEVNHILPMTRVDHFSKYLGMPTDIGRSKQQIFNYIKDRVWKKLKGWKEK 362

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
             LS AG+  L++AVI A+PT++MSCF +P G+C  I  +T+ FWWG +   K  LHW+ W
Sbjct: 363  NLSYAGRGTLLKAVIQAIPTYIMSCFLLPKGLCKQIESMTSNFWWG-SNTDKKKLHWINW 421

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
             ++  +K +GG GF++  +FN+A+LAKQ WR+   P+ L++K+ KAKYFPK   +  K  
Sbjct: 422  KKMCKNKTQGGYGFRNTCMFNEALLAKQGWRIATQPDSLVAKVYKAKYFPKCQFMEAKNG 481

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
            +  S+ W+S + A   L  G  + +G+G+S+NI +  W+PK   FK   + +       V
Sbjct: 482  NMLSYTWRSILHARWILQKGCFWTIGNGESVNIWKDSWLPKQNGFKVWSTQQGYTRYNLV 541

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSK 283
             +L++    +WN+ LI + F   +A  IL +P+ + N +D L+W   K GLYTVKS Y  
Sbjct: 542  KDLINPATNQWNQNLIHQIFLPFEANQILQLPLVEPNSKDELVWSGTKDGLYTVKSGYHA 601

Query: 282  RRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
              ++    L     S         W  LWKL++  K    IWR +N  +P    L  +GI
Sbjct: 602  AMEW--NHLRHNQVSSNAIATDLTWQNLWKLKIPPKHATLIWRILNHSLPVRSSLSSKGI 659

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
            + +P C  C    ET++H+F QC  A+++W  SP
Sbjct: 660  QCNPTCPRCNTSLETIDHVFMQCEWAKVVWFGSP 693


>ref|XP_012079594.1| uncharacterized protein LOC105640000 [Jatropha curcas]
          Length = 1244

 Score =  359 bits (922), Expect = e-109
 Identities = 185/457 (40%), Positives = 273/457 (59%), Gaps = 4/457 (0%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G R     P ++HLFFADDS+LF  A+  +A  VK IL  Y  ASGQ V+  KS +L
Sbjct: 554  LIHGCRAAANCPRISHLFFADDSLLFFDASLDEARWVKDILGAYEVASGQSVNFGKSGLL 613

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FS      +K+DI + L   S    + YLGLP L+ +SK+++F ++++ ++KR+S W NK
Sbjct: 614  FSPCVSDTLKHDISAALGVFSPLNGSSYLGLPSLVMQSKRQIFNFLKERLWKRISSWNNK 673

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
            FLS AG+EV+++AV  A+P + M+ F++P  +CND+  +  +FWW   K    G++W++W
Sbjct: 674  FLSRAGREVMLKAVAQAIPNYCMNVFQLPTTLCNDLQVMMNRFWWNGNKFDGHGINWLSW 733

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
            DR+  SK  GG+GF+DL  FN A+L KQ WRL+   N L+ ++ KAKYFP+G  LS    
Sbjct: 734  DRMCVSKSGGGMGFRDLHCFNVALLGKQGWRLLTKTNTLLYRVFKAKYFPRGDFLSASAI 793

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
               S++WKS + +   L  G  ++VG+G++I++  SPWIPK   F P          MRV
Sbjct: 794  PGQSFVWKSILSSKQVLIQGSHWRVGNGQNIHVTSSPWIPKDDGFFPDDGQLFIPNAMRV 853

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAY-- 289
             +L   G   W+   ++  F   D + IL+IP+S  N  D +IWH+ KKG+YTVK+AY  
Sbjct: 854  CDLFVAGENRWDVNKLMNLFSIRDLRAILSIPLSIMNREDKIIWHFHKKGIYTVKTAYYE 913

Query: 288  --SKRRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLI 115
              +  R  +L S DS            +WN++W L +  K++ F+WR    I+PT  KL+
Sbjct: 914  IFNSLRHHQLPSNDS------------VWNRIWNLHVPPKIRDFMWRACRNILPTRCKLV 961

Query: 114  HRGIEVDPICQICGFQNETLEHLFFQCPRAQIIWKLS 4
             RGI V   C  C   NET +H+ F CPRA+ +W++S
Sbjct: 962  ERGIGVPSACLFCP-DNETSDHVLFACPRARDVWRIS 997


>gb|PNX71533.1| ribonuclease H [Trifolium pratense]
          Length = 798

 Score =  349 bits (895), Expect = e-108
 Identities = 175/442 (39%), Positives = 271/442 (61%), Gaps = 2/442 (0%)
 Frame = -1

Query: 1353 GIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSK 1174
            GI++ + +P ++HLFFADDS+LF  A+  +   +  ILD Y  ASGQ+V+L+KS   FS+
Sbjct: 96   GIKVARSAPQLSHLFFADDSLLFTRASSHETSKILNILDTYQQASGQVVNLDKSEASFSR 155

Query: 1173 NTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLS 994
            N     K+ IC+++   + +  +RYLG P+  GRSKK VF +V D V+K+V GW+ +FLS
Sbjct: 156  NVRINDKDMICNMMGAKAVEAQSRYLGFPIPFGRSKKVVFSFVMDRVWKKVKGWKERFLS 215

Query: 993  PAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAWDRL 814
             AG+E LI+AV  A+P +++SC+K+P+G C DI  + A+FWWG +K+    +HW++W +L
Sbjct: 216  RAGKETLIKAVAQAIPNYILSCYKMPVGCCKDIDSMLAKFWWG-SKDESRKIHWMSWQKL 274

Query: 813  VNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSSD 634
              +K  GG+GF+ +  FN A+L KQ WRLV   + L+ KI K+KY+P G  +S K     
Sbjct: 275  SKAKLDGGMGFRGMEDFNKALLGKQCWRLVTGESSLLEKIFKSKYYPNGNFMSAKEGYQP 334

Query: 633  SWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIP--KPPTFKPTLSGKIDLAGMRVS 460
            S+ W+S + A   +  G  +K+G+G+ + I +  W+P  K   FK       + A   V+
Sbjct: 335  SYGWRSILSARDLVDKGGLWKIGNGRKVKIWKDRWLPDLKVIEFKGVNCPLPEDA--CVA 392

Query: 459  ELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKR 280
            EL+ V   +W + LI   F    AK I+NIP+S     D+LIW+W+K G Y+V+SAY   
Sbjct: 393  ELIDVDTKQWKRDLIFSCFDRLVAKQIINIPLSFRLPHDLLIWNWEKDGEYSVRSAYHLL 452

Query: 279  RQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGIE 100
               K      PG SC   ++ K+W ++W+  +  K+K+F+WR    I+PT   L  +GI 
Sbjct: 453  CDEKARF--QPGPSC--PQRSKLWKEIWRAPVPNKIKNFMWRLAKNILPTRSNLHKKGIT 508

Query: 99   VDPICQICGFQNETLEHLFFQC 34
            +D +C +C  + E+ +HLF +C
Sbjct: 509  LDLLCPLCSSEEESSQHLFLKC 530


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  353 bits (907), Expect = e-108
 Identities = 173/454 (38%), Positives = 273/454 (60%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G+ IC  +P ++HLFFADDS++FC A   +  +++ I+  Y +ASGQLV+  KS ++
Sbjct: 306  LIHGVMICHEAPEISHLFFADDSLVFCRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMV 365

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FSK    +++ DI +IL        ++YLG+P+ +GRSKK++F ++++ ++K++ GW+ K
Sbjct: 366  FSKGVSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEK 425

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
             LS AG+  LI+AV  A+PT++MS F +P G+C+ + ++   FWWG + + +  +HW+ W
Sbjct: 426  HLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVCDQLEKMICNFWWGSSTDHRK-IHWIKW 484

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
              +   K +GG+GF+DL  FN+A+LAKQ WRL+  P+ L++KILKAKY+PKG  L    K
Sbjct: 485  STVCKHKMEGGIGFRDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYYPKGEFLKASHK 544

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
               S+ WKS ++A   +  G  + +G G+ INI E  WI +      T+S   +   ++V
Sbjct: 545  QQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKV 604

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSK 283
             EL+     +WN  +I + F   +A +I  IPI      DIL W   + G Y+VKS Y  
Sbjct: 605  KELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSGYQA 664

Query: 282  RRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
              ++   S ++  +S       ++W  LWKL +  K  HFIWRC++  IP   KL  +GI
Sbjct: 665  IMEWAKNSDNNNATSS--NSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGI 722

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
              DP+C  C    ET++H+F +C  A+ +W  SP
Sbjct: 723  RCDPLCPRCLNHVETIQHVFLECDWAKKVWFASP 756


>ref|XP_012078066.1| uncharacterized protein LOC105638813 [Jatropha curcas]
          Length = 934

 Score =  351 bits (901), Expect = e-108
 Identities = 171/446 (38%), Positives = 275/446 (61%), Gaps = 2/446 (0%)
 Frame = -1

Query: 1338 KGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFSKNTPPR 1159
            +  P ++HL FADDS+ F  AT ++A  VK+IL +Y  ASGQ ++ +KS ++FS NT   
Sbjct: 217  RSCPRISHLLFADDSLFFFKATTSEATKVKEILQKYEKASGQAINFQKSGLVFSPNTDVT 276

Query: 1158 VKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFLSPAGQE 979
             +  I  +L   + +  + YLGLP +IGR+K+++F +++D ++K+++ W N FLS AG+E
Sbjct: 277  TRRQIEQLLGVTTSREDSMYLGLPSVIGRNKRQIFSFLKDRMWKKMNSWSNHFLSKAGKE 336

Query: 978  VLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAWDRLVNSKE 799
            VLI++V+ A+P++ MS F++P+  CN+I ++  +FWW   +E   G+HW++W+R+   K+
Sbjct: 337  VLIKSVLQAIPSYCMSVFELPLTFCNEIHKMMNRFWWRGKQEVGKGIHWLSWERMCGRKD 396

Query: 798  KGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSSDSWLWK 619
            KGG+GF+++  FN AMLAKQ WRL+   N L  K+ KAKYF +   L      + S++WK
Sbjct: 397  KGGMGFKNIRCFNIAMLAKQGWRLLTCENTLFHKVFKAKYFRRKDFLEAPLGKNPSFVWK 456

Query: 618  SWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPT-LSGKIDLAGMRVSELLSVG 442
                A   L  G+R++VG+G  I +   PW+PK   F+     G ID  G+RV +L   G
Sbjct: 457  GIWSASTVLKHGVRWRVGNGDKIRVVHDPWLPKEAPFRVVGWQGFID-EGLRVKDLFVSG 515

Query: 441  GLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRRQ-FKL 265
              +W+   I+  F   ++  ILNIP+S  +  D+ +WH+D+KG+YTVKS Y    + F++
Sbjct: 516  ERKWDVGKIISLFSVEESHQILNIPLSIRDREDVRVWHFDRKGVYTVKSGYKVTCEIFEM 575

Query: 264  ESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGIEVDPIC 85
                       VGE G  W  +W +EM+ K+K  IWR +  ++PT ++L +RG+ V   C
Sbjct: 576  R----------VGEFGSWWKTVWDIEMQPKIKDLIWRVLRGVLPTRERLKNRGVNVTEGC 625

Query: 84   QICGFQNETLEHLFFQCPRAQIIWKL 7
             +CG + E+++H    C  A+ +W L
Sbjct: 626  PLCG-EVESIDHAVINCHFAKRVWNL 650


>gb|PNY02482.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1070

 Score =  353 bits (907), Expect = e-108
 Identities = 173/454 (38%), Positives = 273/454 (60%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G+ IC  +P ++HLFFADDS++FC A   +  +++ I+  Y +ASGQLV+  KS ++
Sbjct: 460  LIHGVMICHEAPEISHLFFADDSLVFCRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMV 519

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FSK    +++ DI +IL        ++YLG+P+ +GRSKK++F ++++ ++K++ GW+ K
Sbjct: 520  FSKGVSNQIQRDISNILPMKILNQFSKYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEK 579

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
             LS AG+  LI+AV  A+PT++MS F +P G+C+ + ++   FWWG + + +  +HW+ W
Sbjct: 580  HLSFAGRGTLIKAVAQAIPTYLMSSFLLPKGVCDQLEKMICNFWWGSSTDHRK-IHWIKW 638

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
              +   K +GG+GF+DL  FN+A+LAKQ WRL+  P+ L++KILKAKY+PKG  L    K
Sbjct: 639  STVCKHKMEGGIGFRDLRAFNEALLAKQGWRLITQPDSLVAKILKAKYYPKGEFLKASHK 698

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
               S+ WKS ++A   +  G  + +G G+ INI E  WI +      T+S   +   ++V
Sbjct: 699  QQMSYTWKSILQASWVIKRGSYWTIGSGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKV 758

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSK 283
             EL+     +WN  +I + F   +A +I  IPI      DIL W   + G Y+VKS Y  
Sbjct: 759  KELMDDNYNDWNVTIINQIFNPYEAHMIQQIPILDKTQSDILTWDGTRDGHYSVKSGYQA 818

Query: 282  RRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGI 103
              ++   S ++  +S       ++W  LWKL +  K  HFIWRC++  IP   KL  +GI
Sbjct: 819  IMEWAKNSDNNNATSS--NSSMEIWKVLWKLNVPPKHSHFIWRCLSNAIPVKGKLFKKGI 876

Query: 102  EVDPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
              DP+C  C    ET++H+F +C  A+ +W  SP
Sbjct: 877  RCDPLCPRCLNHVETIQHVFLECDWAKKVWFASP 910


>gb|PRQ21155.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 761

 Score =  346 bits (888), Expect = e-108
 Identities = 177/452 (39%), Positives = 275/452 (60%)
 Frame = -1

Query: 1356 QGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVLFS 1177
            QGI+IC+G+P++ HL FADDS++F  AT ++   ++ +L+ Y  ASGQ ++  KSS++FS
Sbjct: 74   QGIKICEGAPVIHHLLFADDSLVFGKATLSECQHIQSVLNAYELASGQQINFAKSSIVFS 133

Query: 1176 KNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNKFL 997
            K  P   K  + S L    +    +YLGLP  +GR++ E F Y+++ + K+++GWQ K L
Sbjct: 134  KRVPEADKLSLASFLGVAIEVKHEKYLGLPTYLGRNRTETFAYIKERLSKKLAGWQGKLL 193

Query: 996  SPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAWDR 817
            S AG+++L+R V  A+P++ MSCF +P   C+D+ ++ ++FWWG +K  +  +HW++W+R
Sbjct: 194  SGAGKDLLVRVVAQALPSYAMSCFLLPNNFCDDLHQMCSKFWWG-SKPNERKIHWMSWER 252

Query: 816  LVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPKSS 637
            L  SKE+GG+GF+DL   N A+LAKQ WRL+ +P  L+S++ KA+YFP    L+    + 
Sbjct: 253  LCRSKEEGGMGFRDLHAHNLALLAKQGWRLIRYPGSLVSRLFKARYFPHSSFLNATTPTH 312

Query: 636  DSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRVSE 457
             S  W+    A   L  G+R++VG+G SI I + PWIP+P  F+    G   L  + VS+
Sbjct: 313  SSSCWRGIFVAKSVLQAGLRWQVGNGTSIRIWDDPWIPRPNLFRSIRYGPSPL--VLVSD 370

Query: 456  LLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSKRR 277
            L+  G   WNK+LI E F   +A +I +IP+S+    D LIWH+D KGL+T K AY K  
Sbjct: 371  LMVDG--HWNKELIFENFHADEALLICSIPLSRSIVPDRLIWHFDMKGLFTTKIAY-KIA 427

Query: 276  QFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRGIEV 97
               L  + + GSS         W  +W   + GK+K  +W+    I+PTA +L  R + V
Sbjct: 428  FASLHPVLTSGSSS--NSNPSHWKFIWAAPIPGKVKVHVWKVCASILPTASQLRSRRVPV 485

Query: 96   DPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
            +  C  C  + ETL H+  +C   + +  L+P
Sbjct: 486  EDGCLFCNSEEETLSHVSRECCFTRDVIGLAP 517


>emb|CDP14470.1| unnamed protein product [Coffea canephora]
          Length = 660

 Score =  343 bits (879), Expect = e-108
 Identities = 169/418 (40%), Positives = 259/418 (61%), Gaps = 7/418 (1%)
 Frame = -1

Query: 1233 YCSASGQLVSLEKSSVLFSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVF 1054
            Y  ASGQL++LEKSSV FSKN P   + D+CS L G+++    +YLGLPM+I R+K+++F
Sbjct: 2    YEEASGQLINLEKSSVFFSKNMPMEQRQDVCSALGGMTEMTQGKYLGLPMVISRTKEQIF 61

Query: 1053 QYVRDCVFKRVSGWQNKFLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQF 874
             ++++ + +++  W+NK LS AG+EV+++AV  AMPT+ MS FK+P  +C DI  + A +
Sbjct: 62   GFIKENIKRKMHDWRNKLLSTAGKEVMLKAVSMAMPTYAMSVFKLPRKLCKDISALMANY 121

Query: 873  WWGCAKEGKMGLHWVAWDRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKI 694
            WWG A  GK  LHW++W ++  S+  GGLGF+D+  +N A+L KQ+WR++  PNLL+SK+
Sbjct: 122  WWGEA-NGKNKLHWLSWRKMSLSRNAGGLGFKDIEAYNKALLGKQVWRILTKPNLLISKV 180

Query: 693  LKAKYFPKGGLLSVKPKSSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPP 514
            L+A+YFPK  +L+ +PK + SW+W+  + A   +  G+  ++G+G+S +I    WIP   
Sbjct: 181  LRARYFPKDSILTCRPKQNASWIWQGLLGARRVVEKGVIRRIGNGRSTSIWGHRWIPGSS 240

Query: 513  TFKPTLSGKIDLAGMRVSELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILI 334
            + +PT  G        V+EL+S     W +  I + F ++DA+ ILNIP+S     D   
Sbjct: 241  SGRPTSLGPQSYNLKMVNELIS--HHRWKRNTIFQHFNQSDAEKILNIPLSLMGREDNYY 298

Query: 333  WHWDKKGLYTVKSAY----SKRRQFKLESLDSPGSSCGVGE---KGKMWNKLWKLEMKGK 175
            W  +  G+YTV S Y     +R   K  + +  G S   GE     +MW  LWKL +K K
Sbjct: 299  WQHNPGGIYTVSSGYKCIMKERTNVKQIAPEEAGPSI-TGEDQQSRQMWTTLWKLNIKHK 357

Query: 174  LKHFIWRCINRIIPTADKLIHRGIEVDPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
            +K FIW+CI   +P    +  +    DP+C++CG   ET+EHL   C  +Q +WK +P
Sbjct: 358  VKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQETVEHLMLNCQHSQQVWKAAP 415


>gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1066

 Score =  353 bits (905), Expect = e-108
 Identities = 172/456 (37%), Positives = 271/456 (59%), Gaps = 2/456 (0%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  G+ IC+G+P ++HLFFADDS++FC +   +  +++ I+  Y  ASGQLV+L KS ++
Sbjct: 571  LIHGVTICQGAPDISHLFFADDSLIFCRSNTKEVSTIQNIIQTYQKASGQLVNLAKSEMV 630

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FSK  P   K D+ +IL        ++YLG+P+ +GRSKK++F ++++ ++K++ GW+ K
Sbjct: 631  FSKGVPNNTKQDVSNILPMQIQNQFSKYLGMPIALGRSKKQIFNFIQEKIWKKLKGWKEK 690

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
             LS AG+  LI+AV  A+PT++MS F +P G+C+ + ++   FWWG + + +  +HW+ W
Sbjct: 691  HLSFAGRGTLIKAVAQAIPTYLMSSFLMPKGVCDQLEQMICNFWWGSSTDHRK-IHWIKW 749

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
             ++   K++GG+GF++L  FN+A+LAKQ WRL+  PN L+++ILKAKY+PKG  L+   K
Sbjct: 750  SKVCTQKKQGGMGFRNLRAFNEALLAKQGWRLITQPNSLVTQILKAKYYPKGDFLTATHK 809

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMRV 463
             + S+ W+S ++A   +  G  + +G G+ INI E  WI +      T S   +    +V
Sbjct: 810  QNMSYTWRSILQASWVIKKGSYWTIGSGQDINIWEDNWIQQKGNSTGTSSKPNNCGFTKV 869

Query: 462  SELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYSK 283
             EL+     EWN  +I + F   +A +IL IPI      D L W   + G Y+VKS Y  
Sbjct: 870  KELMDNNYNEWNASIINQVFNPYEAHMILQIPILDKTQPDTLTWDGTRDGTYSVKSGYHA 929

Query: 282  RRQF--KLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHR 109
               +     S ++  S+C +    ++W  LWKL +  K  H IWR +   IP    L  R
Sbjct: 930  IIDWANNSNSNNATSSNCSM----EIWKVLWKLNVPPKHSHLIWRSLRNAIPVKGSLFKR 985

Query: 108  GIEVDPICQICGFQNETLEHLFFQCPRAQIIWKLSP 1
            GI  DP+C  C    ET++H+F  C   + +W  SP
Sbjct: 986  GIRCDPLCPRCLDHVETIQHVFMDCEWTKKVWFASP 1021


>ref|XP_023878301.1| uncharacterized protein LOC111990748 [Quercus suber]
          Length = 1325

 Score =  357 bits (916), Expect = e-108
 Identities = 189/454 (41%), Positives = 270/454 (59%), Gaps = 4/454 (0%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  GI I +G P VTHLFFADDSILFC A   +   ++ IL +Y  ASGQ ++ +KSS+ 
Sbjct: 627  LITGISINRGCPKVTHLFFADDSILFCKAAYEECHLLRSILGQYEEASGQKINTDKSSIF 686

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FS NT    +++I +IL  + +    +YLGLP LIGRSK +VF  +++ V  +++GW+ K
Sbjct: 687  FSPNTAQETRDEIFNILGPMQNSRHTKYLGLPSLIGRSKSQVFAMLKEKVGHKLAGWKGK 746

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCA-KEGKMGLHWVA 826
             LS  G+E+LI+AV  A+PT+ MSCF +P G+C+D+ R+   FWWG   +E KMG  W++
Sbjct: 747  LLSMGGKEILIKAVAQAIPTYTMSCFLLPQGLCDDMERMMKNFWWGQRNQETKMG--WIS 804

Query: 825  WDRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKP 646
            W R+ NSK  GGLGF++L  FN AMLAKQ WR++ +PN L+ ++LKA+YFP G LL+ K 
Sbjct: 805  WKRMCNSKASGGLGFRNLKAFNLAMLAKQAWRILYNPNSLVGRVLKARYFPTGDLLNAKL 864

Query: 645  KSSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWIPKPPTFKPTLSGKIDLAGMR 466
             SS S+ W+S   ++  +  G R++VG+GK I+I E  W+P P T+K       +     
Sbjct: 865  GSSPSYSWRSIHSSLEVIRRGTRWRVGNGKQIHIWEDRWLPTPSTYKVISPQIHNFEFPL 924

Query: 465  VSELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYS 286
            VS L+      W  + +   F   + + IL IP+S +   D LIW  +KKG ++VKSAY 
Sbjct: 925  VSSLIDPDTKWWKVEALRSIFLPFEVETILRIPLSYNLPEDKLIWIGNKKGEFSVKSAY- 983

Query: 285  KRRQFKLESLDSPG--SSCGVGEKGK-MWNKLWKLEMKGKLKHFIWRCINRIIPTADKLI 115
                    S+  P     C  G+  + +W KLW L + GK+K F WR     +PT D + 
Sbjct: 984  ----HIAHSIIDPNERGECSNGDPYRLLWKKLWLLNLPGKIKIFAWRACVDGLPTYDNIS 1039

Query: 114  HRGIEVDPICQICGFQNETLEHLFFQCPRAQIIW 13
             RGI     C ICG   E + H    C  A ++W
Sbjct: 1040 KRGICCSSTCPICGLVTEDVNHALLYCEAASLVW 1073


>gb|PNX95563.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1188

 Score =  354 bits (908), Expect = e-107
 Identities = 177/451 (39%), Positives = 272/451 (60%), Gaps = 1/451 (0%)
 Frame = -1

Query: 1362 LFQGIRICKGSPMVTHLFFADDSILFCSATPAQAVSVKQILDRYCSASGQLVSLEKSSVL 1183
            L  GIRI +G+P ++HLFFADDS++FC AT  +  +++ I+  Y  ASGQLV+L KS ++
Sbjct: 485  LIHGIRISQGAPEISHLFFADDSLMFCRATNKEVSTIQDIIQTYQKASGQLVNLTKSEMV 544

Query: 1182 FSKNTPPRVKNDICSILNGISDKPCARYLGLPMLIGRSKKEVFQYVRDCVFKRVSGWQNK 1003
            FSK     +K +I  IL     +  ++YLG+P++ GRSK+++F Y+R+ ++K++ GW+ K
Sbjct: 545  FSKGVTNGIKEEISRILPMQISEYFSKYLGMPIVHGRSKQQIFNYIREKIWKKLKGWKEK 604

Query: 1002 FLSPAGQEVLIRAVINAMPTFVMSCFKIPIGICNDICRVTAQFWWGCAKEGKMGLHWVAW 823
             LS AG+  LI+AV  A+PT++MSCF IP G+C  + ++   FWWG   + +  +HW+ W
Sbjct: 605  NLSFAGRGTLIKAVAQAIPTYLMSCFLIPKGVCEQLEKMICNFWWGSTTDQRK-MHWLKW 663

Query: 822  DRLVNSKEKGGLGFQDLPLFNDAMLAKQLWRLVIHPNLLMSKILKAKYFPKGGLLSVKPK 643
             ++ N K  GGLGF+DL  FN+A+LAKQ WRL+  P  L++++LKAKYFP    L+ K K
Sbjct: 664  SKVCNQKRNGGLGFRDLRAFNEALLAKQGWRLITKPTSLVAQVLKAKYFPNESFLNAKHK 723

Query: 642  SSDSWLWKSWIKAIGTLALGIRFKVGDGKSINICESPWI-PKPPTFKPTLSGKIDLAGMR 466
               S+ W+S ++A   +  G  + +GDG+ INI E  W+  K  T+K       +L  ++
Sbjct: 724  QVMSYTWRSIMQASWVIKRGSYWSIGDGEDINIWEDNWMQQKSATYKGRPKPN-NLNLIK 782

Query: 465  VSELLSVGGLEWNKQLILEAFCETDAKIILNIPISQDNCRDILIWHWDKKGLYTVKSAYS 286
            V EL+     EWN  +I + F   +A++ILNIPI      D+L W   + G Y+VKS Y 
Sbjct: 783  VKELMDSNYNEWNTDIINQVFLPYEAQMILNIPIIDKTQPDMLTWDCTQDGQYSVKSGYH 842

Query: 285  KRRQFKLESLDSPGSSCGVGEKGKMWNKLWKLEMKGKLKHFIWRCINRIIPTADKLIHRG 106
               ++      SP ++        +WN LWKL++  K  H +WR ++  +P  + L  RG
Sbjct: 843  AIMEWGNLPNASPSNN-----SQHIWNVLWKLKVPPKHSHLLWRVLHNALPVKNNLFKRG 897

Query: 105  IEVDPICQICGFQNETLEHLFFQCPRAQIIW 13
            +  DP+C  C    ET+ H+F  C  A+  W
Sbjct: 898  VRCDPLCPRCSNSMETIHHVFLDCEWAKQTW 928