BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00039015
         (910 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   516   e-170
ref|XP_017178332.1| PREDICTED: uncharacterized mitochondrial pro...   443   e-153
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]   464   e-152
gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense]   446   e-152
gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifo...   442   e-150
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]   454   e-149
emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]   457   e-148
emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]   454   e-147
gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinen...   448   e-147
gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinen...   428   e-147
gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinen...   450   e-145
gb|PRQ55184.1| putative RNA-directed DNA polymerase [Rosa chinen...   427   e-145
gb|KZV47100.1| retrovirus-related Pol polyprotein from transposo...   427   e-145
gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense]   441   e-142
ref|XP_018816630.1| PREDICTED: uncharacterized protein LOC108988...   412   e-141
gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinen...   420   e-141
gb|KYP57482.1| Retrovirus-related Pol polyprotein from transposo...   408   e-139
gb|KYP66580.1| Retrovirus-related Pol polyprotein from transposo...   408   e-139
gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]            432   e-138
emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   436   e-136

>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  516 bits (1328), Expect = e-170
 Identities = 249/303 (82%), Positives = 274/303 (90%)
 Frame = -2

Query: 909  QKVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVD 730
            QKVYRLKKALYGLKQAPRAWYS IESYFM EGF KC +EHTLF K GKGGKILIVCLYVD
Sbjct: 964  QKVYRLKKALYGLKQAPRAWYSXIESYFMKEGFKKCHYEHTLFIKXGKGGKILIVCLYVD 1023

Query: 729  DLIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQR 550
            DLIFTGNDE+MF  FKKSMMLEFDMT LGKMRYFLGIEVMQR DGIFI+QKKY  EVL+R
Sbjct: 1024 DLIFTGNDEIMFAXFKKSMMLEFDMTXLGKMRYFLGIEVMQRSDGIFINQKKYTXEVLER 1083

Query: 549  FKMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISR 370
            F MD+CNPV+NPMVPG  LMK+ DG+++DSTFYK+IVGSLMYLTAT PD+MF VVSLISR
Sbjct: 1084 FSMDKCNPVHNPMVPGFXLMKNGDGVRVDSTFYKKIVGSLMYLTATXPDVMF-VVSLISR 1142

Query: 369  FMDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYV 190
            F DCPTE+HLQ+AKRI RYLKGTI+FGVFYKKG NEELIAYTDSDYAGD+DDRKSTSGYV
Sbjct: 1143 FXDCPTELHLQSAKRILRYLKGTIDFGVFYKKGGNEELIAYTDSDYAGDLDDRKSTSGYV 1202

Query: 189  FMMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCD 10
            FM+ S A+SWSSKKQP+V+LSTTEAEFIAAT+C CQAIWL+RI+  LN  QH+S TV+CD
Sbjct: 1203 FMLSSGAVSWSSKKQPVVSLSTTEAEFIAATSCVCQAIWLRRILEGLNHAQHDSTTVYCD 1262

Query: 9    NSS 1
            NSS
Sbjct: 1263 NSS 1265


>ref|XP_017178332.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Malus domestica]
          Length = 375

 Score =  443 bits (1140), Expect = e-153
 Identities = 211/301 (70%), Positives = 252/301 (83%)
 Frame = -2

Query: 906 KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
           KVYRLKKALYGLKQAPRAWYSRIE+YF+ EGF KC +EHTLF K    GK+L+VCLYVDD
Sbjct: 11  KVYRLKKALYGLKQAPRAWYSRIETYFVQEGFEKCPYEHTLFMKKADIGKLLJVCLYVDD 70

Query: 726 LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
           LIFTGNDE+MF  FKKSMM EFDMT+LG+MRYFLGIEV+QR DGIF+SQ+KYA EVL+RF
Sbjct: 71  LIFTGNDEIMFEHFKKSMMNEFDMTNLGEMRYFLGIEVLQRVDGIFVSQRKYAQEVLERF 130

Query: 546 KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
           KMD+CNPV+NP+VPG  L KD DG++ D TFYKQI+GSLMYLTAT PD+MF VVSL+SR+
Sbjct: 131 KMDQCNPVHNPIVPGFHLTKDEDGVRTDGTFYKQIIGSLMYLTATHPDLMF-VVSLVSRY 189

Query: 366 MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
           M+ PTE H+Q  KR+ RY++GT++FG+FYKKG  EEL+ Y DSDYA D +DR+STSGYVF
Sbjct: 190 MERPTETHMQVVKRVLRYVRGTVSFGLFYKKGGTEELVGYADSDYANDQNDRESTSGYVF 249

Query: 186 MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
           ++ S A+SWSSKKQPIVTL T EAEFIAA + A QA+WL+RI+  LN     S  + CDN
Sbjct: 250 ILSSSAVSWSSKKQPIVTLLTIEAEFIAAASTAFQAVWLRRILEQLNHGPCKSTVIHCDN 309

Query: 6   S 4
           +
Sbjct: 310 T 310


>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
          Length = 1088

 Score =  464 bits (1193), Expect = e-152
 Identities = 224/302 (74%), Positives = 263/302 (87%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVYRLKKALYGLKQAPRAWYSRIESYF+ EGF KC +EHTLFTKT +GGKILIVCLYVD+
Sbjct: 716  KVYRLKKALYGLKQAPRAWYSRIESYFIKEGFNKCPYEHTLFTKTAEGGKILIVCLYVDE 775

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGNDE MF +FKKSMM+EFDMTDL K+RYFLGIEVMQ+ DGIFI+Q+KYA EVL+RF
Sbjct: 776  LIFTGNDESMFKQFKKSMMVEFDMTDLEKLRYFLGIEVMQKTDGIFINQRKYAQEVLERF 835

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             + +CNPV+NP+VPG KL +D +G+++D T YKQ+VGSLMYLTATRPD+MF  VSLISR+
Sbjct: 836  NLYQCNPVHNPVVPGFKLTRDKEGVEVDGTLYKQMVGSLMYLTATRPDLMF-SVSLISRY 894

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M+ PTE HL AAKRI RY+KGT+ FGVFYKKG +++ I YTDSDYAGD DDRKSTSGYVF
Sbjct: 895  MEHPTESHLLAAKRILRYVKGTVEFGVFYKKGGDDKFIGYTDSDYAGDHDDRKSTSGYVF 954

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
             M S A+SWSSKKQP+VTLSTTEAEFIAA + ACQA+WL+RI+ +LN VQ +   ++CDN
Sbjct: 955  -MNSSAVSWSSKKQPVVTLSTTEAEFIAAASSACQAVWLRRILKSLNQVQTSPTVIYCDN 1013

Query: 6    SS 1
             S
Sbjct: 1014 VS 1015


>gb|PNX85069.1| retrotransposon-related protein [Trifolium pratense]
          Length = 538

 Score =  446 bits (1146), Expect = e-152
 Identities = 215/302 (71%), Positives = 256/302 (84%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+LKKALYGLKQAPR+W+SRIE+YF+ EGF KC  EHTLF K  K GKILIV +YVDD
Sbjct: 165  KVYKLKKALYGLKQAPRSWFSRIEAYFVKEGFLKCHSEHTLFVKISKEGKILIVSIYVDD 224

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTG+DE MF +FK SMM EFDM+DLGKMRYFLGIEV+QR DGI+I QKKYA EVL+RF
Sbjct: 225  LIFTGDDESMFEDFKNSMMHEFDMSDLGKMRYFLGIEVLQRNDGIYICQKKYALEVLRRF 284

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             M+  N V+NP+VPG K+ KD +G+K+D+TF+KQ+VGSLMYLT TRPD+MF VVSLISR+
Sbjct: 285  GMEGSNSVHNPIVPGFKICKDKEGVKVDATFFKQVVGSLMYLTTTRPDLMF-VVSLISRY 343

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M  PTE+HLQAAKR+ RYLKGT +FG+FYKKG +E L+AY DSDYAGD++DRKSTSGYVF
Sbjct: 344  MAQPTELHLQAAKRVLRYLKGTADFGIFYKKGGSENLVAYADSDYAGDLEDRKSTSGYVF 403

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            +M S A+SWSSKKQPIVTLSTTEAEF+AA  CA Q +W++RI++ L   Q  S  +FCDN
Sbjct: 404  LMSSGAVSWSSKKQPIVTLSTTEAEFVAAAYCASQIVWMRRILDKLGHSQSGSTVMFCDN 463

Query: 6    SS 1
            SS
Sbjct: 464  SS 465


>gb|PNX81877.1| hypothetical protein L195_g037902, partial [Trifolium pratense]
          Length = 575

 Score =  442 bits (1136), Expect = e-150
 Identities = 206/302 (68%), Positives = 254/302 (84%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+LK+ALYGLKQAPRAWYSRIE+YF  EGF +C +EHTLF K  + G ILIV LYVDD
Sbjct: 214  KVYKLKRALYGLKQAPRAWYSRIEAYFTKEGFERCPYEHTLFVKQSETGNILIVSLYVDD 273

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGNDE MF EFKKSM  EF+M+DLGKM YFLG+EV+Q  +GI+I Q+KY  ++L+RF
Sbjct: 274  LIFTGNDENMFKEFKKSMEKEFNMSDLGKMHYFLGVEVIQNEEGIYICQRKYVTDLLERF 333

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             M++ N   NP+ PGCKL+KD +G+K+D+T YKQ+VG LMYL ATRPD+M+ V+SLISRF
Sbjct: 334  GMEKSNLSRNPIAPGCKLIKDENGVKVDATMYKQVVGCLMYLAATRPDLMY-VLSLISRF 392

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M+CPTE+H+ A KR+ RYL GTIN G+ YK+G NE+L AYTDSDYAGD+DDRKSTSGYVF
Sbjct: 393  MNCPTELHMHAVKRVLRYLNGTINLGIMYKRGGNEKLEAYTDSDYAGDLDDRKSTSGYVF 452

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            M+ + A+SWSSKKQP+VTLSTTEAEFIAA +CACQ+IW++R++  L  +Q  SITV+CDN
Sbjct: 453  MLSAGAVSWSSKKQPVVTLSTTEAEFIAAASCACQSIWMQRVLEKLGHIQVGSITVYCDN 512

Query: 6    SS 1
            SS
Sbjct: 513  SS 514


>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
          Length = 1021

 Score =  454 bits (1168), Expect = e-149
 Identities = 221/302 (73%), Positives = 258/302 (85%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY LKKALYGLKQAPRAWYSRIE+YFM EGF KC +EHTLF  T K GK LIV LYVDD
Sbjct: 653  KVYXLKKALYGLKQAPRAWYSRIEAYFMKEGFEKCDYEHTLFIXTSKEGKXLIVSLYVDD 712

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGNDELMF EFK SM  EFDMTDLGKMRYFLG+EV+Q  DG+FISQKKYA EVL++F
Sbjct: 713  LIFTGNDELMFXEFKNSMKHEFDMTDLGKMRYFLGLEVLQISDGVFISQKKYALEVLKQF 772

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             MD+ N V+NP+VP  KLMKD  G+K+D+T+YKQIVGSLMYL ATR D+MF VVSLISR+
Sbjct: 773  GMDKSNFVHNPIVPSFKLMKDEGGVKVDNTYYKQIVGSLMYLIATRLDMMF-VVSLISRY 831

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M+ PTE+HLQ AKR+ RYLKGT  FG+FYKKG ++EL AYTDSDYAGD++D+KSTSGYVF
Sbjct: 832  MENPTELHLQVAKRVLRYLKGTTEFGIFYKKGGDDELAAYTDSDYAGDLEDKKSTSGYVF 891

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            ++ SRA+SWSS+KQP+V+LSTTEAEFIAA +CACQA+WLKR++  L+  Q  S T+ CDN
Sbjct: 892  LLSSRAVSWSSRKQPVVSLSTTEAEFIAAASCACQAVWLKRVLGKLSQNQGKSTTIHCDN 951

Query: 6    SS 1
            SS
Sbjct: 952  SS 953


>emb|CAN65188.1| hypothetical protein VITISV_004365 [Vitis vinifera]
          Length = 1265

 Score =  457 bits (1175), Expect = e-148
 Identities = 220/303 (72%), Positives = 260/303 (85%)
 Frame = -2

Query: 909  QKVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVD 730
            QKVY+LKKALYGLKQAP AWYS IE+YFM EGF KC +EHTLF KT K GK+LIV LYVD
Sbjct: 919  QKVYKLKKALYGLKQAPXAWYSXIEAYFMKEGFEKCDYEHTLFIKTRKEGKVLIVSLYVD 978

Query: 729  DLIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQR 550
            DLIFTGNDELMF +FK+SM  EFDMTDLGKMRYFLG+EV+QR DGIFISQKKYA EVLQR
Sbjct: 979  DLIFTGNDELMFTDFKRSMKDEFDMTDLGKMRYFLGLEVLQRSDGIFISQKKYALEVLQR 1038

Query: 549  FKMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISR 370
            F MD+ N V+NP+VPG KLMKD  G+K+D T+YKQ+VGSLMYL ATRPD+MF VVSLISR
Sbjct: 1039 FGMDKSNSVHNPIVPGFKLMKDEGGVKVDKTYYKQVVGSLMYLXATRPDMMF-VVSLISR 1097

Query: 369  FMDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYV 190
            +M+ PTE+HLQAAKR+ RYL+GT  FG+FY+KG ++EL+ YT+SD+AGD+D+RKSTSGYV
Sbjct: 1098 YMENPTELHLQAAKRVLRYLQGTTEFGIFYRKGGDDELVTYTBSDHAGDLDERKSTSGYV 1157

Query: 189  FMMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCD 10
            F++ S AISWSSKKQPIV+LS+TEAEFIAA +CACQA+WLKR++  L   Q     + CD
Sbjct: 1158 FLLSSGAISWSSKKQPIVSLSSTEAEFIAAASCACQAVWLKRVLGKLGQNQGKPTIIHCD 1217

Query: 9    NSS 1
            +SS
Sbjct: 1218 SSS 1220


>emb|CAN79845.1| hypothetical protein VITISV_027568 [Vitis vinifera]
          Length = 1226

 Score =  454 bits (1167), Expect = e-147
 Identities = 218/303 (71%), Positives = 262/303 (86%)
 Frame = -2

Query: 909  QKVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVD 730
            QKVY+LKKALYGLKQAPRAWY+RIE+YFM E F KC +EHTLF KT K GK+LIV LYVD
Sbjct: 852  QKVYKLKKALYGLKQAPRAWYNRIEAYFMKEVFEKCDYEHTLFIKTNKEGKVLIVSLYVD 911

Query: 729  DLIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQR 550
            DLIFT NDELMF EFK SM  EF+MTDLGKMRYFLG+EV+Q+ DGIFIS+KKYA EVL R
Sbjct: 912  DLIFTXNDELMFAEFKYSMKHEFNMTDLGKMRYFLGLEVLQKSDGIFISKKKYALEVLNR 971

Query: 549  FKMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISR 370
            F MD+ N V NP+VPGCKL+KD  G+K+D T+YKQ+VGSLMYLTAT+P +MF VVS+ISR
Sbjct: 972  FGMDKSNSVFNPIVPGCKLVKDEGGVKVDKTYYKQVVGSLMYLTATQPYLMF-VVSIISR 1030

Query: 369  FMDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYV 190
            +M+ PTE+HLQAAKR+ RYL+GTI+FG+FY+ G ++EL+AYTDSDYA D++DRKSTSGYV
Sbjct: 1031 YMENPTELHLQAAKRVLRYLRGTIDFGIFYRXGGDDELVAYTDSDYAVDLEDRKSTSGYV 1090

Query: 189  FMMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCD 10
            F++ S AISWSSKKQP+V+LSTTEAEFIAAT+CACQA+WLKR++  L+  Q  S  + CD
Sbjct: 1091 FLLSSEAISWSSKKQPVVSLSTTEAEFIAATSCACQAVWLKRVLGKLDQNQSRSCVIQCD 1150

Query: 9    NSS 1
            +SS
Sbjct: 1151 SSS 1153


>gb|PRQ42077.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1044

 Score =  448 bits (1153), Expect = e-147
 Identities = 214/302 (70%), Positives = 249/302 (82%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+L KALYGLKQAPRAWYSRIE+YF+ EGF +C HEHTLF K  +GGKILIV LYVDD
Sbjct: 671  KVYKLNKALYGLKQAPRAWYSRIEAYFIKEGFERCPHEHTLFVKLSEGGKILIVSLYVDD 730

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGNDE MF EFKKSM  EFDM+DLG MRYFLG+EV+Q   GI+I QKKYA E+L+RF
Sbjct: 731  LIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASEILERF 790

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             M++ N V NP+VPG KLMKD  G+K+D+T YKQIVGSLMYLTATRPD+M+ VVSLISRF
Sbjct: 791  GMEKANSVRNPIVPGFKLMKDEGGVKVDATMYKQIVGSLMYLTATRPDLMY-VVSLISRF 849

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M  PTE+H+QAAKR+ RYLKGT+N GV Y++   E+L A+TDSDYAGD+DDRKSTSGY+F
Sbjct: 850  MSSPTELHMQAAKRVLRYLKGTVNLGVLYRRNGEEKLEAFTDSDYAGDVDDRKSTSGYIF 909

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            M    A+SWSSKKQP+VTLSTTEAEFIAA  CACQ +W++RI   L   Q    TV+CDN
Sbjct: 910  MFSDGAVSWSSKKQPVVTLSTTEAEFIAAAYCACQGVWMRRIFERLGHAQRGCTTVYCDN 969

Query: 6    SS 1
            SS
Sbjct: 970  SS 971


>gb|PRQ33949.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 425

 Score =  428 bits (1100), Expect = e-147
 Identities = 207/302 (68%), Positives = 247/302 (81%)
 Frame = -2

Query: 906 KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
           KVY+L+KALYGLKQAPRAW+SRIE+YF+ EGF KC  E TLF KT   GK+LIV LYVDD
Sbjct: 52  KVYKLRKALYGLKQAPRAWFSRIEAYFLREGFEKCPSEQTLFVKTNNRGKLLIVSLYVDD 111

Query: 726 LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
           LI+TGND+ M  EFK SMM EFDM+DLGKMRYFLG+EV Q +DGIFISQKKYA +VL+RF
Sbjct: 112 LIYTGNDDAMMREFKDSMMKEFDMSDLGKMRYFLGLEVQQLQDGIFISQKKYAMDVLRRF 171

Query: 546 KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
            M++ N V NP+VPG K+ KD  GI++D TFYKQ+VGSLMYLT+TRPD+M+  VSLI+R+
Sbjct: 172 GMEKSNAVLNPIVPGFKISKDESGIEVDGTFYKQLVGSLMYLTSTRPDLMY-AVSLIARY 230

Query: 366 MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
           M  PTE+HL AAKR+ RY+KGT+ FG+ YKK  +  L AYTDSDYAG ++DRKSTSGY F
Sbjct: 231 MSQPTELHLMAAKRVLRYVKGTVGFGILYKKEASGVLTAYTDSDYAGCLEDRKSTSGYAF 290

Query: 186 MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
           MM S A++WSS+KQPIVTLSTTEAEF+AA ACACQAIW+KR++  L        TVFCDN
Sbjct: 291 MMSSGAVAWSSRKQPIVTLSTTEAEFVAAAACACQAIWMKRVLKMLGCEGDKCTTVFCDN 350

Query: 6   SS 1
           SS
Sbjct: 351 SS 352


>gb|PRQ52345.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1316

 Score =  450 bits (1157), Expect = e-145
 Identities = 215/302 (71%), Positives = 250/302 (82%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+L KALYGLKQAPRAWYSRIE+YF+ EGF +C HEHTLF K+ +GGKILIV LYVDD
Sbjct: 943  KVYKLNKALYGLKQAPRAWYSRIEAYFIKEGFERCPHEHTLFVKSSEGGKILIVSLYVDD 1002

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGNDE MF EFKKSM  EFDM+DLG MRYFLG+EV+Q   GI+I QKKYA E+L+RF
Sbjct: 1003 LIFTGNDEYMFEEFKKSMKDEFDMSDLGMMRYFLGVEVVQNEAGIYICQKKYASEILERF 1062

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             M++ N V NP+VPG KLMKD  G+K+D+T YKQIVGSLMYLTATRPD+M+ VVSLISRF
Sbjct: 1063 GMEKANSVRNPIVPGIKLMKDEGGVKVDATMYKQIVGSLMYLTATRPDLMY-VVSLISRF 1121

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M  PTE+H+QAAKR+ RYLKGTIN GV Y++   E+L A+TDSDYAGD+DDRKSTSGY+F
Sbjct: 1122 MSSPTELHMQAAKRVLRYLKGTINLGVLYRRNGEEKLEAFTDSDYAGDVDDRKSTSGYIF 1181

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            M    A+SWSSKKQP+VTLSTTEAEFIAA  CACQ +W++RI   L   Q    TV+CDN
Sbjct: 1182 MFSDGAVSWSSKKQPVVTLSTTEAEFIAAAYCACQGVWMRRIFERLGHAQRGCTTVYCDN 1241

Query: 6    SS 1
            SS
Sbjct: 1242 SS 1243


>gb|PRQ55184.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 516

 Score =  427 bits (1097), Expect = e-145
 Identities = 206/303 (67%), Positives = 249/303 (82%)
 Frame = -2

Query: 909  QKVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVD 730
            +KVYRLKKALYGLKQAPRAWYSRI++YF N GF +C +EHTL+ K+G  GK L VCLYVD
Sbjct: 122  EKVYRLKKALYGLKQAPRAWYSRIDTYFSNAGFQRCPYEHTLYIKSGIAGKFLAVCLYVD 181

Query: 729  DLIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQR 550
            DLI+TGND+ MF +FK SMM EF+MTDL ++ YFLGIEV+Q   GIFI+Q+KYA EVL++
Sbjct: 182  DLIYTGNDDDMFTKFKNSMMAEFEMTDLERLHYFLGIEVLQSSAGIFITQRKYALEVLEK 241

Query: 549  FKMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISR 370
            F+M +CN V  P  PG KL  D DG K+ STF+KQIVGSLMYLTATRPDIM + VSLISR
Sbjct: 242  FEMKDCNAVAIPAEPGLKLTMDPDGKKVGSTFFKQIVGSLMYLTATRPDIM-LSVSLISR 300

Query: 369  FMDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYV 190
            FM+ PTE HL AAKRI RY+KGT +FGV YK+GE  EL+ +TDSDYAGD++DR+STS YV
Sbjct: 301  FMERPTEQHLPAAKRILRYVKGTFDFGVLYKRGEKSELVGFTDSDYAGDVNDRRSTSAYV 360

Query: 189  FMMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCD 10
            FMMGS  +SW+SKKQPIVTLSTTEAEF+AATACA QAIWL++++  L++ Q    T++CD
Sbjct: 361  FMMGSGPVSWASKKQPIVTLSTTEAEFVAATACASQAIWLRKLLEELSYEQQGPTTIYCD 420

Query: 9    NSS 1
            N S
Sbjct: 421  NIS 423


>gb|KZV47100.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Dorcoceras hygrometricum]
          Length = 553

 Score =  427 bits (1099), Expect = e-145
 Identities = 210/302 (69%), Positives = 247/302 (81%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+LKKALYGLKQAPRAWYSRIE+YF+  GF KC +EHTLFTK    GK+LIVCLYVDD
Sbjct: 174  KVYKLKKALYGLKQAPRAWYSRIETYFLKTGFKKCPYEHTLFTKFEDDGKMLIVCLYVDD 233

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            L FTGND  MF +FK+SMM+EFDM+DLGKM YFLGIEV+Q   GIFISQKKY  E+L RF
Sbjct: 234  LSFTGNDVSMFEDFKESMMVEFDMSDLGKMHYFLGIEVVQSTGGIFISQKKYIQELLCRF 293

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             M++CN  N P+  G KL +  +G KIDST +KQIVGSLMYLTATRPDIM+  VSLISR+
Sbjct: 294  HMEKCNAANTPVELGLKLTRYCEGKKIDSTVFKQIVGSLMYLTATRPDIMY-SVSLISRY 352

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M+ PTE+HL AAKRI RYL+GT    ++YKKGE  +LIA+ DSDYAGD DDRKSTSGYVF
Sbjct: 353  MENPTEVHLLAAKRILRYLQGTQKLSLYYKKGEKADLIAFCDSDYAGDQDDRKSTSGYVF 412

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            ++GS A+SWSSKKQ IVTLSTTEAEF+AAT+CACQAIWLK+I+  L +  H    ++CDN
Sbjct: 413  LLGSAAVSWSSKKQSIVTLSTTEAEFVAATSCACQAIWLKKILTDLKFKTHGPTVIYCDN 472

Query: 6    SS 1
            +S
Sbjct: 473  NS 474


>gb|PNY07765.1| putative copia-type polyprotein [Trifolium pratense]
          Length = 1321

 Score =  441 bits (1135), Expect = e-142
 Identities = 206/301 (68%), Positives = 250/301 (83%)
 Frame = -2

Query: 903  VYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDDL 724
            VY+LK+ALYGLKQAPRAWYSRI++YF   GF KC +EHTL+ KTG+ G  LIVCLYVDDL
Sbjct: 949  VYKLKRALYGLKQAPRAWYSRIDAYFSQTGFHKCPYEHTLYIKTGEKGNFLIVCLYVDDL 1008

Query: 723  IFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRFK 544
            IFTGNDE +F EFK+SMM EF+MTDLG M+YFLGIEV+Q   GIFI QKKYA EVL+RFK
Sbjct: 1009 IFTGNDECLFKEFKQSMMKEFEMTDLGMMKYFLGIEVVQSAAGIFICQKKYAQEVLERFK 1068

Query: 543  MDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRFM 364
            MD+CNPV  P+VPG KL +D +G KID+T+YKQ+VGSLMY+TATRPD+ +  VSLISR+M
Sbjct: 1069 MDDCNPVQIPIVPGTKLTRDVEGTKIDNTYYKQMVGSLMYITATRPDLTY-AVSLISRYM 1127

Query: 363  DCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVFM 184
            + PTE+H Q  K+I RYLKGT+N+G+FYKK E  EL+ ++DSDYAGD+DDRKSTSGYVF+
Sbjct: 1128 ESPTELHHQVVKKILRYLKGTVNYGLFYKKSEINELVGFSDSDYAGDLDDRKSTSGYVFL 1187

Query: 183  MGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDNS 4
            +   A+SWSSKKQP+VTLSTTEAEFIAA +C CQ IWL+RI+  +   Q   + +FCDNS
Sbjct: 1188 LSGAAVSWSSKKQPVVTLSTTEAEFIAAASCVCQGIWLRRILEEVKHTQQGPLMLFCDNS 1247

Query: 3    S 1
            S
Sbjct: 1248 S 1248


>ref|XP_018816630.1| PREDICTED: uncharacterized protein LOC108988006 [Juglans regia]
          Length = 372

 Score =  412 bits (1058), Expect = e-141
 Identities = 196/297 (65%), Positives = 243/297 (81%)
 Frame = -2

Query: 891 KKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDDLIFTG 712
           K  ++G KQAPRAWYSRIE+YF+ EGF +C  EHTLF  TG GGKILIV LYVDDLIFTG
Sbjct: 5   KPLVHGTKQAPRAWYSRIEAYFVKEGFERCSCEHTLFI-TGDGGKILIVSLYVDDLIFTG 63

Query: 711 NDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRFKMDEC 532
           NDE MFV+FK SM LEFDMTDLGKM+YFLG+EV+Q  + I+ISQ+KYA EVL++F+M++ 
Sbjct: 64  NDESMFVKFKNSMKLEFDMTDLGKMKYFLGVEVLQNPESIYISQRKYAKEVLEKFRMEKS 123

Query: 531 NPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRFMDCPT 352
           N V NP+VPG +LMKD +G K+++T YKQ+VGSLMYLTATRPD+M+ VVSLISRFM  PT
Sbjct: 124 NSVKNPIVPGFRLMKDEEGAKVNATMYKQLVGSLMYLTATRPDLMY-VVSLISRFMANPT 182

Query: 351 EIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVFMMGSR 172
           E+HLQ AKR+ RYLKGT++ G+FY+K  N EL+AYTDSDYA  ++DR+STSGYVF++   
Sbjct: 183 ELHLQVAKRVLRYLKGTVDLGIFYRKEGNGELMAYTDSDYARYVNDRRSTSGYVFLLSEG 242

Query: 171 AISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDNSS 1
            +SWSSKKQP+V LSTTEAEF+AA +CACQ +W++R++      Q    TV CDNSS
Sbjct: 243 VVSWSSKKQPVVALSTTEAEFVAAASCACQGVWMRRVLEKFGHSQGKCTTVLCDNSS 299


>gb|PRQ38020.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 610

 Score =  420 bits (1079), Expect = e-141
 Identities = 200/302 (66%), Positives = 246/302 (81%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+LKKALYGLKQAPRAWYSRIE+YF+ EGF KC  EHTLF K G GGK LIV LYVDD
Sbjct: 237  KVYKLKKALYGLKQAPRAWYSRIENYFVKEGFEKCDFEHTLFIKMGAGGKCLIVSLYVDD 296

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGN E MFV+FK+SMM EFDM+DLGKMRYFLG+EV+Q  +GI+ISQKK+A E+L+RF
Sbjct: 297  LIFTGNCEKMFVKFKESMMQEFDMSDLGKMRYFLGVEVLQCTEGIYISQKKFAKELLERF 356

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             MD CN V+NP+VPG K+ KD +G+++D+T YKQ+VGSLMYLT TRPD+MF VV + SRF
Sbjct: 357  GMDGCNSVHNPIVPGVKIGKDENGVRVDATTYKQMVGSLMYLTVTRPDLMF-VVCMASRF 415

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M  PTE+H Q  KR+ RY+ GT+  G+FYKK  ++ L AYTDSDYAGD+ DR+STSGYVF
Sbjct: 416  MANPTELHFQIVKRVLRYVGGTVELGIFYKKRGDQMLQAYTDSDYAGDVSDRRSTSGYVF 475

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
             +   A+SW SKKQP+VTLSTTEAE++AA +CA Q IW++R++  L   Q+ S+ + CDN
Sbjct: 476  SLSGGAVSWMSKKQPVVTLSTTEAEYVAAASCATQGIWMQRVLEKLGLTQNCSVIIKCDN 535

Query: 6    SS 1
            SS
Sbjct: 536  SS 537


>gb|KYP57482.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 380

 Score =  408 bits (1049), Expect = e-139
 Identities = 196/301 (65%), Positives = 246/301 (81%)
 Frame = -2

Query: 903 VYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDDL 724
           VY++ KALYGLKQAPRAW+S IESYF+  GF K +++HTLF K  K GKILI+ +YVDDL
Sbjct: 2   VYKIHKALYGLKQAPRAWFSCIESYFVAAGFQKSQNKHTLFFKRSKLGKILIISVYVDDL 61

Query: 723 IFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRFK 544
           I+TG+DELM  +FK+SM  EFDMTDLG MR+FLGIEV+Q  DGI+I QKKYA E+L+RF 
Sbjct: 62  IYTGDDELMMEDFKRSMHGEFDMTDLGMMRFFLGIEVLQCSDGIYICQKKYALEILRRFG 121

Query: 543 MDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRFM 364
           M+E NP+ NP+VPG KL +D +GIK++ T +KQ+VGSLMY+T TRPD+MF VVSLISR+M
Sbjct: 122 MEESNPICNPIVPGYKLCRDEEGIKVNETHFKQMVGSLMYITTTRPDLMF-VVSLISRYM 180

Query: 363 DCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVFM 184
             PTE+H + AKRI RYLKGT N+G+ YK+G  EEL AYTDSDYAGD++DRKSTSGYVF+
Sbjct: 181 SQPTEMHAKVAKRILRYLKGTENYGILYKRGGIEELQAYTDSDYAGDLEDRKSTSGYVFI 240

Query: 183 MGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDNS 4
           M   +++WSS+KQPIVT+STTEAEFIAA  CACQA+W++R++  L + Q  S  + CDN 
Sbjct: 241 MSGGSVAWSSRKQPIVTISTTEAEFIAAAGCACQAVWMRRVLKELGYKQEGSTVIKCDNY 300

Query: 3   S 1
           S
Sbjct: 301 S 301


>gb|KYP66580.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 380

 Score =  408 bits (1048), Expect = e-139
 Identities = 198/301 (65%), Positives = 244/301 (81%)
 Frame = -2

Query: 903 VYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDDL 724
           VY+L KALYGLKQAPRAW+SRIESYF+  GF K ++E TLF K  K GKILI+ +YVDDL
Sbjct: 2   VYKLHKALYGLKQAPRAWFSRIESYFVTAGFQKSQNEQTLFFKRSKLGKILIISVYVDDL 61

Query: 723 IFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRFK 544
           I+T +DELM  +FK+SM  EFDMTDLG MR+FLGIEV+Q  DGI+I QKKYA E+L+RF 
Sbjct: 62  IYTRDDELMMEDFKRSMHREFDMTDLGMMRFFLGIEVLQCSDGIYICQKKYALEILRRFG 121

Query: 543 MDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRFM 364
           M+E NPV NP+VPG KL +D +GIK++ T +KQ+VGSLMY+T TRPD+MF VVSLISR+M
Sbjct: 122 MEESNPVCNPIVPGYKLCRDEEGIKVNETHFKQMVGSLMYITTTRPDLMF-VVSLISRYM 180

Query: 363 DCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVFM 184
             PTE+H + AKRI RYLKGT N+G+ YK+G  EEL+AYTDSDYAGD++DRKSTSGYVF+
Sbjct: 181 SQPTEMHAKVAKRILRYLKGTENYGILYKRGGIEELLAYTDSDYAGDLEDRKSTSGYVFI 240

Query: 183 MGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDNS 4
           M   ++SWSS+KQPIVTLSTTE EFIAA  CA QA+W++R++  L + Q  S  + CDN 
Sbjct: 241 MSGGSVSWSSRKQPIVTLSTTEVEFIAAAGCAYQAVWMRRVLKELGYKQEGSTVIKCDNC 300

Query: 3   S 1
           S
Sbjct: 301 S 301


>gb|PNX93789.1| copia-type polyprotein [Trifolium pratense]
          Length = 1347

 Score =  432 bits (1110), Expect = e-138
 Identities = 206/302 (68%), Positives = 250/302 (82%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+LKKALYGLKQAPRAWYS+IE+YF+ EGF KC  EHTLFTKT +G K+LIV LYVDD
Sbjct: 974  KVYKLKKALYGLKQAPRAWYSKIEAYFVREGFEKCFCEHTLFTKTKEGSKLLIVSLYVDD 1033

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LI+TGND +M  EFK SMM+EFDM+DLG+MRYFLGIEV+Q  +GIF+ Q++YAHEVL RF
Sbjct: 1034 LIYTGNDRIMCEEFKNSMMVEFDMSDLGRMRYFLGIEVIQNPNGIFVCQRRYAHEVLVRF 1093

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             M+  N V NP+VPG KL K+ +  K+D+T Y ++VGSLMYLTATRPD+M+  VSLISRF
Sbjct: 1094 GMNNSNSVQNPIVPGTKLSKNNEETKVDATLYMKMVGSLMYLTATRPDLMY-GVSLISRF 1152

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M CPTE H  AAKRI RYLKGT   G+FYKKG+N  L+AYTDSD+AGD+DDR+STSG+VF
Sbjct: 1153 MSCPTESHWLAAKRILRYLKGTTELGIFYKKGDNSNLVAYTDSDFAGDLDDRRSTSGFVF 1212

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            ++GS A+SWSSKKQPIVTLSTTEAE++AA +CACQ +WLKR++  L   +  S  + CDN
Sbjct: 1213 LLGSAAVSWSSKKQPIVTLSTTEAEYVAAASCACQCLWLKRVLEKLGHKEKRSTMIQCDN 1272

Query: 6    SS 1
            SS
Sbjct: 1273 SS 1274


>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  436 bits (1122), Expect = e-136
 Identities = 208/302 (68%), Positives = 253/302 (83%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KVY+LKKALYGLKQAPRAWYS IE+YF+ EGF +C  EHTLF K G GGKILIV LYVDD
Sbjct: 667  KVYKLKKALYGLKQAPRAWYSWIEAYFVKEGFERCNCEHTLFIKMGDGGKILIVSLYVDD 726

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            LIFTGN+E MFV+FK SM LEFDMTDLGKM+YFL +EV+Q  +GI+ISQ+KYA +VL+ F
Sbjct: 727  LIFTGNNESMFVKFKNSMKLEFDMTDLGKMKYFLNVEVLQNLEGIYISQRKYAKDVLEWF 786

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
            +M++ N V NP+VPG +LMKD +G K+++T YKQ+VGSLM+LTATRPD+M+ VVSLISRF
Sbjct: 787  RMEKSNSVKNPIVPGVRLMKDEEGSKVNATMYKQLVGSLMHLTATRPDLMY-VVSLISRF 845

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
            M  PTE+HLQAAKR+ RYLKGT++ G+ Y+K  N ELIAYTDSDYAGD+DDRKSTSGYVF
Sbjct: 846  MASPTELHLQAAKRVLRYLKGTVDLGILYQKEGNGELIAYTDSDYAGDVDDRKSTSGYVF 905

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
            ++    +SWSSKKQP+VTLSTTEAEF+AA +CACQ +W++R++  L   Q    TV CDN
Sbjct: 906  LLSEGVVSWSSKKQPVVTLSTTEAEFVAAASCACQGVWMRRVLEKLCHSQGKCTTVLCDN 965

Query: 6    SS 1
            SS
Sbjct: 966  SS 967



 Score =  133 bits (334), Expect = 6e-31
 Identities = 94/302 (31%), Positives = 145/302 (48%)
 Frame = -2

Query: 906  KVYRLKKALYGLKQAPRAWYSRIESYFMNEGFGKCKHEHTLFTKTGKGGKILIVCLYVDD 727
            KV  L++ALYGLKQAPRAW+++  S     G+    ++  LF +    G IL++ LYVDD
Sbjct: 2088 KVCHLRRALYGLKQAPRAWFAKFXSTIFRLGYTASPYDSALFLRRTDKGTILLL-LYVDD 2146

Query: 726  LIFTGNDELMFVEFKKSMMLEFDMTDLGKMRYFLGIEVMQRRDGIFISQKKYAHEVLQRF 547
            +I TGND     E K  +  +F+M DLG + YFLG+E+    DG++I+Q KYA ++L + 
Sbjct: 2147 MIITGNDLSGIQELKDFLSQQFEMKDLGHLSYFLGLEITHSTDGLYITQAKYASDLLSQA 2206

Query: 546  KMDECNPVNNPMVPGCKLMKDADGIKIDSTFYKQIVGSLMYLTATRPDIMFVVVSLISRF 367
             + +   V+  +     L         + + Y+++VGSL+YLT TRPDI + V       
Sbjct: 2207 GLTDSKNVDTLVELNAHLTPSRGKPLSNPSLYRRLVGSLVYLTVTRPDISYAV------- 2259

Query: 366  MDCPTEIHLQAAKRIFRYLKGTINFGVFYKKGENEELIAYTDSDYAGDIDDRKSTSGYVF 187
                 EI L A       L+ T +F V         LI++           +K T     
Sbjct: 2260 ---HQEILLIAG-----LLQVTTSFLVL-------SLISWR---------SKKQT----- 2290

Query: 186  MMGSRAISWSSKKQPIVTLSTTEAEFIAATACACQAIWLKRIMNTLNWVQHNSITVFCDN 7
                            V  S+TEAE+ A      + +WL+ ++  L     ++  ++CDN
Sbjct: 2291 ---------------FVARSSTEAEYRALADTTSELLWLRWLLKDLGVSTSSATPLYCDN 2335

Query: 6    SS 1
             S
Sbjct: 2336 QS 2337