BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00038973
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX92571.1| histone deacetylase [Trifolium pratense]               135   4e-34
gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposo...   127   9e-34
gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposo...   127   4e-33
gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposo...   128   2e-32
ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424...   130   5e-32
emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]   129   7e-32
gb|KYP41981.1| Retrovirus-related Pol polyprotein from transposo...   127   8e-32
emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]   128   1e-31
gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposo...   123   1e-31
emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]   128   2e-31
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   127   3e-31
gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposo...   123   5e-31
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...   126   1e-30
gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposo...   125   1e-30
gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposo...   125   1e-30
gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposo...   125   1e-30
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo...   125   2e-30
ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415...   125   2e-30
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo...   124   2e-30
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   125   3e-30

>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  135 bits (341), Expect = 4e-34
 Identities = 56/82 (68%), Positives = 69/82 (84%)
 Frame = +1

Query: 22   SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPT 201
            +P+ +LFKQ PD+ FLKVFGCAC+P LRPY NHKL+FR+ +CLFLGYSPSHKGY+CLSP+
Sbjct: 773  TPYFLLFKQHPDYHFLKVFGCACFPLLRPYHNHKLEFRSQECLFLGYSPSHKGYRCLSPS 832

Query: 202  GHIYISRTVSFNEEDFPYSSLF 267
            G +Y+S+ V FNE  FPY  LF
Sbjct: 833  GRLYVSKDVLFNESRFPYKELF 854


>gb|KYP70184.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 243

 Score =  127 bits (320), Expect = 9e-34
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           PF +LFKQ+PD+ FLK FGCAC+P+LRPY  HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 51  PFTVLFKQAPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASG 110

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            IYIS+ V FNE  FPY  LF
Sbjct: 111 KIYISKDVIFNETRFPYLDLF 131


>gb|KYP48079.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 302

 Score =  127 bits (320), Expect = 4e-33
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           P+ +LFKQSPD++FLK FGCAC+P LRPY  HKL FR+ +C+FLGYS SHKGYKCLSP G
Sbjct: 219 PYTILFKQSPDYTFLKTFGCACFPLLRPYNKHKLDFRSHECVFLGYSTSHKGYKCLSPIG 278

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            I+IS+ V FNE  FPY  LF
Sbjct: 279 KIFISKDVVFNEYRFPYHELF 299


>gb|KYP59043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 426

 Score =  128 bits (321), Expect = 2e-32
 Identities = 55/82 (67%), Positives = 64/82 (78%)
 Frame = +1

Query: 10  LGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKC 189
           L N+SP+Q+LF + PD++FLK FGC CYP LRPY  HKL F++ +CLFLGYS  HKGYKC
Sbjct: 166 LQNISPYQILFHKPPDYNFLKTFGCGCYPLLRPYNQHKLDFKSHQCLFLGYSNQHKGYKC 225

Query: 190 LSPTGHIYISRTVSFNEEDFPY 255
           LSPTG  YISR V FNE  FPY
Sbjct: 226 LSPTGKCYISRHVKFNESFFPY 247


>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
          Length = 1270

 Score =  130 bits (326), Expect = 5e-32
 Identities = 53/82 (64%), Positives = 71/82 (86%)
 Frame = +1

Query: 22   SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPT 201
            SPF++LFK+ PD+ FLKVFG AC+P+LRP+QNHK QF T KC+F+GYS  HKGYKC+S +
Sbjct: 841  SPFELLFKKVPDYDFLKVFGSACFPFLRPFQNHKFQFHTEKCVFIGYSDDHKGYKCMSSS 900

Query: 202  GHIYISRTVSFNEEDFPYSSLF 267
            G IYI+R+V+FNE++FP+S+ F
Sbjct: 901  GKIYIARSVNFNEKEFPFSTGF 922


>emb|CAN83839.1| hypothetical protein VITISV_023230 [Vitis vinifera]
          Length = 731

 Score =  129 bits (324), Expect = 7e-32
 Identities = 58/86 (67%), Positives = 67/86 (77%)
 Frame = +1

Query: 7   VLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYK 186
           +L + SPFQ LF  +PD  FLK FGC C+P+LRPY +HKLQFR+SKCLFLGYS +HKGY 
Sbjct: 72  ILSHDSPFQKLFGCTPDSHFLKTFGCTCFPHLRPYNSHKLQFRSSKCLFLGYSSTHKGYL 131

Query: 187 CLSPTGHIYISRTVSFNEEDFPYSSL 264
           CL P G IYISR V FNE +FPYS L
Sbjct: 132 CLHPFGKIYISRNVIFNEHEFPYSEL 157


>gb|KYP41981.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 498

 Score =  127 bits (320), Expect = 8e-32
 Identities = 55/81 (67%), Positives = 64/81 (79%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           P+ +LFKQ PD+ FLK FGCAC+P LRPY NHKL F + +C+FLGYS SHKGYKCLSPTG
Sbjct: 149 PYNVLFKQIPDYKFLKTFGCACFPLLRPYNNHKLNFSSHECVFLGYSSSHKGYKCLSPTG 208

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            I+IS+ V FNE  FPY  LF
Sbjct: 209 RIFISKDVVFNEYRFPYYDLF 229


>emb|CAN78509.1| hypothetical protein VITISV_031642 [Vitis vinifera]
          Length = 722

 Score =  128 bits (322), Expect = 1e-31
 Identities = 54/88 (61%), Positives = 69/88 (78%), Gaps = 1/88 (1%)
 Frame = +1

Query: 7   VLGNL-SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGY 183
           VL N  SPF+ LF   PD+SF KVFGC+CYPYLR Y +HK  F+++KCLFLGYSP+H GY
Sbjct: 475 VLANFQSPFETLFGSKPDYSFFKVFGCSCYPYLRSYNSHKFSFKSTKCLFLGYSPAHNGY 534

Query: 184 KCLSPTGHIYISRTVSFNEEDFPYSSLF 267
           +C S +  IY+++ V+FNE DFPYS+LF
Sbjct: 535 RCFSSSNRIYVAKLVTFNENDFPYSTLF 562


>gb|KYP56498.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 297

 Score =  123 bits (309), Expect = 1e-31
 Identities = 53/81 (65%), Positives = 64/81 (79%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           PF +LFKQ+PD++FLK FGC C+ +LRPY  HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 98  PFTVLFKQTPDYNFLKTFGCVCFSFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASG 157

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            IYIS+ V FNE  FPY  LF
Sbjct: 158 KIYISKDVIFNETRFPYLDLF 178


>emb|CAN75728.1| hypothetical protein VITISV_031408 [Vitis vinifera]
          Length = 1099

 Score =  128 bits (322), Expect = 2e-31
 Identities = 55/87 (63%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   VLGNL-SPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGY 183
           VL N  SPF+ LF    D+SF KVFGC+CY YLRPY +HK  FR++KCLFLGYSP HKGY
Sbjct: 449 VLANFQSPFKTLFGSKLDYSFFKVFGCSCYSYLRPYNSHKFSFRSTKCLFLGYSPXHKGY 508

Query: 184 KCLSPTGHIYISRTVSFNEEDFPYSSL 264
           +CLS +G IY++++++FNE DFPYS+L
Sbjct: 509 RCLSXSGQIYVAKSITFNENDFPYSTL 535


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1268

 Score =  127 bits (320), Expect = 3e-31
 Identities = 55/81 (67%), Positives = 65/81 (80%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           PF +LFKQ+PD+ FLK FGCAC+P+LRPY  HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 627 PFTVLFKQTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASG 686

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            IYIS+ V FNE  FPY  LF
Sbjct: 687 KIYISKDVIFNETRFPYLDLF 707


>gb|KYP78025.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 339

 Score =  123 bits (308), Expect = 5e-31
 Identities = 54/89 (60%), Positives = 66/89 (74%)
 Frame = +1

Query: 1   SHVLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKG 180
           S  L  + P+ +LFK  PD+ FLK FGC C+P LRPY  HKL +R+ +CLFLGYS +HKG
Sbjct: 97  SVALNFVVPYTILFKTPPDYDFLKSFGCVCFPLLRPYNTHKLDYRSQECLFLGYSHAHKG 156

Query: 181 YKCLSPTGHIYISRTVSFNEEDFPYSSLF 267
           YKCLS TG IYIS+ V FNE+ FPY+ LF
Sbjct: 157 YKCLSATGRIYISKDVIFNEQRFPYAHLF 185


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1064

 Score =  126 bits (316), Expect = 1e-30
 Identities = 52/81 (64%), Positives = 64/81 (79%)
 Frame = +1

Query: 25   PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
            P+ +LF Q PD+ FLKVFGCAC+P LRPY  HKL +R+ +CLFLGYSPSHKGY+CLSP G
Sbjct: 766  PYTLLFHQDPDYKFLKVFGCACFPLLRPYNTHKLDYRSHECLFLGYSPSHKGYRCLSPNG 825

Query: 205  HIYISRTVSFNEEDFPYSSLF 267
             ++IS+ V FNE  FP+  LF
Sbjct: 826  RLFISKDVIFNESRFPFIDLF 846


>gb|KYP38387.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 600

 Score =  125 bits (314), Expect = 1e-30
 Identities = 52/89 (58%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   SHVLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKG 180
           S  +G+ SP+ ++  + PD+ FLK+FGC+C+P LRPY  HK+Q R+ +CLFLGYSP+HKG
Sbjct: 331 SSSIGHQSPYHLIHHKEPDYQFLKIFGCSCFPLLRPYNQHKIQPRSEECLFLGYSPTHKG 390

Query: 181 YKCLSPTGHIYISRTVSFNEEDFPYSSLF 267
           YKCLS +G IYIS+ V FNE  FPY  LF
Sbjct: 391 YKCLSKSGRIYISKDVVFNESRFPYQDLF 419


>gb|KYP67039.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1279

 Score =  125 bits (315), Expect = 1e-30
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           PF  LF +SPD+ FL+ FGCAC+P+LRPY +HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 571 PFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSG 630

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            IYIS+ V FNE  FPY+ LF
Sbjct: 631 RIYISKDVIFNEHRFPYTDLF 651


>gb|KYP61342.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1358

 Score =  125 bits (315), Expect = 1e-30
 Identities = 53/81 (65%), Positives = 65/81 (80%)
 Frame = +1

Query: 25  PFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYKCLSPTG 204
           PF  LF +SPD+ FL+ FGCAC+P+LRPY +HKL FR+ +C+FLGYS SHKGYKCLS +G
Sbjct: 650 PFTTLFNKSPDYKFLRTFGCACFPFLRPYASHKLNFRSQECVFLGYSNSHKGYKCLSSSG 709

Query: 205 HIYISRTVSFNEEDFPYSSLF 267
            IYIS+ V FNE  FPY+ LF
Sbjct: 710 RIYISKDVIFNEHRFPYTDLF 730


>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 872

 Score =  125 bits (314), Expect = 2e-30
 Identities = 54/89 (60%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   SHVLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKG 180
           S  +G  SP++++  + PD++FLKVFGC+C+P LRPY  HK+Q R+ +CLFLGYSPSHKG
Sbjct: 331 SSSVGFQSPYKLIHNKDPDYAFLKVFGCSCFPLLRPYNQHKIQPRSEECLFLGYSPSHKG 390

Query: 181 YKCLSPTGHIYISRTVSFNEEDFPYSSLF 267
           YKCLS +G IYIS+ V FNE  FPY+ LF
Sbjct: 391 YKCLSRSGRIYISKDVIFNEGRFPYNDLF 419


>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
          Length = 884

 Score =  125 bits (314), Expect = 2e-30
 Identities = 53/87 (60%), Positives = 68/87 (78%)
 Frame = +1

Query: 7   VLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKGYK 186
           VL   SPFQ ++ Q PD+ FL VFGCACYPYLRPY   KLQFRTSKC+F+GYS  HKGYK
Sbjct: 433 VLDYKSPFQKVYNQVPDYGFLTVFGCACYPYLRPYHTQKLQFRTSKCVFVGYSTEHKGYK 492

Query: 187 CLSPTGHIYISRTVSFNEEDFPYSSLF 267
            + P+G +Y++++V FNE DFP+++ F
Sbjct: 493 YMHPSGRLYVAKSVKFNEFDFPFAAGF 519


>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 488

 Score =  124 bits (310), Expect = 2e-30
 Identities = 52/89 (58%), Positives = 70/89 (78%)
 Frame = +1

Query: 1   SHVLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKG 180
           S  +G  SP++++  + PD++FLK+FGC+C+P LRPY  HK+Q R+ +C+FLGYSPSHKG
Sbjct: 200 SSSVGFQSPYKLIHNKDPDYAFLKIFGCSCFPLLRPYNQHKIQPRSEECVFLGYSPSHKG 259

Query: 181 YKCLSPTGHIYISRTVSFNEEDFPYSSLF 267
           YKCLS +G IYIS+ V FNE  FPY+ LF
Sbjct: 260 YKCLSRSGRIYISKDVIFNEGRFPYNDLF 288


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  125 bits (313), Expect = 3e-30
 Identities = 54/89 (60%), Positives = 68/89 (76%)
 Frame = +1

Query: 1   SHVLGNLSPFQMLFKQSPDFSFLKVFGCACYPYLRPYQNHKLQFRTSKCLFLGYSPSHKG 180
           + V+ N SP+Q LF ++PD++ +K FGCACYP L+PY  HKLQF T+KC+FLGYS SHKG
Sbjct: 566 TQVIKNKSPYQQLFDKNPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKG 625

Query: 181 YKCLSPTGHIYISRTVSFNEEDFPYSSLF 267
           YKCL+ TG I+ISR V FNE  FP+   F
Sbjct: 626 YKCLNSTGRIFISRHVVFNEHHFPFHDGF 654