BLASTX nr result
ID: Rehmannia29_contig00038790
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00038790
(508 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_015389421.1| PREDICTED: uncharacterized protein LOC107178... 100 5e-39
dbj|GAU38423.1| hypothetical protein TSUD_396030 [Trifolium subt... 95 9e-38
gb|PRQ42072.1| putative RNA-directed DNA polymerase [Rosa chinen... 92 4e-37
ref|XP_024164007.1| uncharacterized protein LOC112170981 [Rosa c... 92 4e-37
gb|PRQ52889.1| putative RNA-directed DNA polymerase [Rosa chinen... 92 6e-37
ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa c... 92 6e-37
ref|XP_019418611.1| PREDICTED: uncharacterized protein LOC109329... 92 6e-37
gb|PRQ42233.1| putative RNA-directed DNA polymerase [Rosa chinen... 92 6e-37
ref|XP_017187427.1| PREDICTED: uncharacterized protein LOC108173... 94 1e-36
dbj|GAU39008.1| hypothetical protein TSUD_378840 [Trifolium subt... 93 1e-36
ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411... 93 2e-36
ref|XP_008366056.1| PREDICTED: uncharacterized protein LOC103429... 94 4e-36
gb|PNX90569.1| ribonuclease H, partial [Trifolium pratense] 92 4e-36
gb|PNY06897.1| ribonuclease H, partial [Trifolium pratense] 93 5e-36
gb|PNX71458.1| ribonuclease H, partial [Trifolium pratense] 92 8e-36
ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438... 92 1e-35
gb|PNX83244.1| ribonuclease H, partial [Trifolium pratense] 96 2e-35
gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptas... 95 3e-35
dbj|GAU20518.1| hypothetical protein TSUD_130760 [Trifolium subt... 88 4e-35
gb|PNX94425.1| ribonuclease H, partial [Trifolium pratense] 91 7e-35
>ref|XP_015389421.1| PREDICTED: uncharacterized protein LOC107178584 [Citrus sinensis]
Length = 714
Score = 100 bits (248), Expect(2) = 5e-39
Identities = 44/69 (63%), Positives = 58/69 (84%)
Frame = -1
Query: 208 MDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGY 29
+ N+ LK+DI+KAFD+L+W FLLHVLR FGFSEIFI WV +L S+++S+L+NG+P G+
Sbjct: 522 LGGNLGLKLDIKKAFDSLEWSFLLHVLRCFGFSEIFIKWVYTLLHSTKLSILINGSPCGF 581
Query: 28 FSCFRGVRQ 2
FSC RGVRQ
Sbjct: 582 FSCSRGVRQ 590
Score = 89.0 bits (219), Expect(2) = 5e-39
Identities = 47/81 (58%), Positives = 55/81 (67%)
Frame = -2
Query: 459 LIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFG 280
L+ LN++F+ LIPK DAN I FRPIV+ NF+FKII KILA RLG I LSP Q
Sbjct: 437 LLPNLNSNFIVLIPKEPDANEISKFRPIVLGNFIFKIIPKILADRLGKFIARILSPQQTA 496
Query: 279 FILGRQIHDCIAMVSEGFNVL 217
FI GR I + I MVSE N+L
Sbjct: 497 FIKGRSIVESIGMVSENVNLL 517
>dbj|GAU38423.1| hypothetical protein TSUD_396030 [Trifolium subterraneum]
Length = 773
Score = 94.7 bits (234), Expect(2) = 9e-38
Identities = 44/70 (62%), Positives = 56/70 (80%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL+W FLL VL+RFGF+EIF +W++VIL+S+ +SV +NG G
Sbjct: 139 SYGGNLALKIDISKAFDTLEWSFLLKVLKRFGFNEIFCNWINVILQSAFLSVSINGKAHG 198
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 199 YFNCSRGVRQ 208
Score = 90.1 bits (222), Expect(2) = 9e-38
Identities = 42/81 (51%), Positives = 59/81 (72%)
Frame = -2
Query: 450 GLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFIL 271
G N++ +AL+PKT DA +I+ +RPI M+NF FKII+KILA RL SI+ + +S + GFI
Sbjct: 58 GFNSNIIALLPKTPDATSIDQYRPIAMANFKFKIISKILADRLASIMPSLISEEEMGFIH 117
Query: 270 GRQIHDCIAMVSEGFNVLHGR 208
GR I DC+ + SE N+LH +
Sbjct: 118 GRDIKDCLCIASEAANLLHNK 138
>gb|PRQ42072.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1248
Score = 91.7 bits (226), Expect(2) = 4e-37
Identities = 50/96 (52%), Positives = 63/96 (65%)
Frame = -2
Query: 504 DGCVCCCPFFLY*LVLIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATR 325
D C FFL +L +N +F+ LIPK +A I FRPI ++NFLFKII KILA+R
Sbjct: 344 DVVACVRQFFLQNWILP-NMNCNFLVLIPKVPNAQLITQFRPIALANFLFKIIPKILASR 402
Query: 324 LGSIIFAYLSPTQFGFILGRQIHDCIAMVSEGFNVL 217
LGSI +SP Q F+ GR+I+ CI MVSE FN+L
Sbjct: 403 LGSIATRIISPQQSAFLPGRRINHCIGMVSECFNLL 438
Score = 90.9 bits (224), Expect(2) = 4e-37
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
N+ +K+DI KAFDTL WDFLL VL FGFS F WV IL S+R+S+L+NG+P G+F+C
Sbjct: 446 NVGIKVDIAKAFDTLNWDFLLRVLSNFGFSPTFTSWVSSILHSARLSLLINGSPQGFFTC 505
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 506 SRGVRQ 511
>ref|XP_024164007.1| uncharacterized protein LOC112170981 [Rosa chinensis]
Length = 1205
Score = 91.7 bits (226), Expect(2) = 4e-37
Identities = 50/96 (52%), Positives = 63/96 (65%)
Frame = -2
Query: 504 DGCVCCCPFFLY*LVLIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATR 325
D C FFL +L +N +F+ LIPK +A I FRPI ++NFLFKII KILA+R
Sbjct: 333 DVVACVRQFFLQNWILP-NMNCNFLVLIPKVPNAQLITQFRPIALANFLFKIIPKILASR 391
Query: 324 LGSIIFAYLSPTQFGFILGRQIHDCIAMVSEGFNVL 217
LGSI +SP Q F+ GR+I+ CI MVSE FN+L
Sbjct: 392 LGSIATRIISPQQSAFLPGRRINHCIGMVSECFNLL 427
Score = 90.9 bits (224), Expect(2) = 4e-37
Identities = 41/66 (62%), Positives = 51/66 (77%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
N+ +K+DI KAFDTL WDFLL VL FGFS F WV IL S+R+S+L+NG+P G+F+C
Sbjct: 435 NVGIKVDIAKAFDTLNWDFLLRVLSNFGFSPTFTSWVSSILHSARLSLLINGSPQGFFTC 494
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 495 SRGVRQ 500
>gb|PRQ52889.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1394
Score = 91.7 bits (226), Expect(2) = 6e-37
Identities = 50/96 (52%), Positives = 63/96 (65%)
Frame = -2
Query: 504 DGCVCCCPFFLY*LVLIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATR 325
D C FFL +L +N +F+ LIPK +A I FRPI ++NFLFKII KILA+R
Sbjct: 477 DVVACVRQFFLQNWILP-NMNCNFLVLIPKVPNAQLITQFRPIALANFLFKIIPKILASR 535
Query: 324 LGSIIFAYLSPTQFGFILGRQIHDCIAMVSEGFNVL 217
LGSI +SP Q F+ GR+I+ CI MVSE FN+L
Sbjct: 536 LGSIATRIISPQQSAFLPGRRINHCIGMVSECFNLL 571
Score = 90.5 bits (223), Expect(2) = 6e-37
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
N+ +K+DI KAFDTL WDFLL VL FGFS F W+ IL S+R+S+L+NG+P G+F+C
Sbjct: 579 NVGIKVDIAKAFDTLNWDFLLRVLSNFGFSPTFTSWISSILHSARLSLLINGSPQGFFTC 638
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 639 SRGVRQ 644
>ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa chinensis]
Length = 1248
Score = 91.7 bits (226), Expect(2) = 6e-37
Identities = 50/96 (52%), Positives = 63/96 (65%)
Frame = -2
Query: 504 DGCVCCCPFFLY*LVLIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATR 325
D C FFL +L +N +F+ LIPK +A I FRPI ++NFLFKII KILA+R
Sbjct: 344 DVVACVRQFFLQNWILP-NMNCNFLVLIPKVPNAQLITQFRPIALANFLFKIIPKILASR 402
Query: 324 LGSIIFAYLSPTQFGFILGRQIHDCIAMVSEGFNVL 217
LGSI +SP Q F+ GR+I+ CI MVSE FN+L
Sbjct: 403 LGSIATRIISPQQSAFLPGRRINHCIGMVSECFNLL 438
Score = 90.5 bits (223), Expect(2) = 6e-37
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
N+ +K+DI KAFDTL WDFLL VL FGFS F W+ IL S+R+S+L+NG+P G+F+C
Sbjct: 446 NVGIKVDIAKAFDTLNWDFLLRVLSNFGFSPTFTSWISSILHSARLSLLINGSPQGFFTC 505
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 506 SRGVRQ 511
>ref|XP_019418611.1| PREDICTED: uncharacterized protein LOC109329402 [Lupinus
angustifolius]
Length = 1168
Score = 92.0 bits (227), Expect(2) = 6e-37
Identities = 37/66 (56%), Positives = 54/66 (81%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
N+ +K+DI+KAFDT+ W FLL L FGF+++FIHW++VIL+S+ +S+++NG VG+F C
Sbjct: 368 NLAIKLDIKKAFDTMDWLFLLDTLNAFGFNQVFIHWIEVILKSAMLSIIINGRSVGFFQC 427
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 428 KRGVRQ 433
Score = 90.1 bits (222), Expect(2) = 6e-37
Identities = 44/81 (54%), Positives = 59/81 (72%)
Frame = -2
Query: 459 LIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFG 280
L+ LN++ + LIPKT A+ IE FRPI ++NF FKII+K++A RLG+I +SP Q G
Sbjct: 280 LLPNLNSNNVILIPKTPGADRIEEFRPIALANFQFKIISKVIADRLGTITSRIISPQQKG 339
Query: 279 FILGRQIHDCIAMVSEGFNVL 217
FI GR+IHDCI + SE N+L
Sbjct: 340 FIKGRKIHDCICIASEAINLL 360
>gb|PRQ42233.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1140
Score = 91.7 bits (226), Expect(2) = 6e-37
Identities = 50/96 (52%), Positives = 63/96 (65%)
Frame = -2
Query: 504 DGCVCCCPFFLY*LVLIFGLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATR 325
D C FFL +L +N +F+ LIPK +A I FRPI ++NFLFKII KILA+R
Sbjct: 344 DVVACVRQFFLQNWILP-NMNCNFLVLIPKVPNAQLITQFRPIALANFLFKIIPKILASR 402
Query: 324 LGSIIFAYLSPTQFGFILGRQIHDCIAMVSEGFNVL 217
LGSI +SP Q F+ GR+I+ CI MVSE FN+L
Sbjct: 403 LGSIATRIISPQQSAFLPGRRINHCIGMVSECFNLL 438
Score = 90.5 bits (223), Expect(2) = 6e-37
Identities = 40/66 (60%), Positives = 51/66 (77%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
N+ +K+DI KAFDTL WDFLL VL FGFS F W+ IL S+R+S+L+NG+P G+F+C
Sbjct: 446 NVGIKVDIAKAFDTLNWDFLLRVLSNFGFSPTFTSWISSILHSARLSLLINGSPQGFFTC 505
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 506 SRGVRQ 511
>ref|XP_017187427.1| PREDICTED: uncharacterized protein LOC108173233 [Malus domestica]
Length = 1251
Score = 93.6 bits (231), Expect(2) = 1e-36
Identities = 42/66 (63%), Positives = 52/66 (78%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
NM +K++I KAFDTL W FLL VL FGFS FI WV ILRS+++S+L+NG+P G+FSC
Sbjct: 446 NMGVKVBIAKAFDTLDWSFLLRVLTNFGFSTCFIDWVSTILRSAKLSILINGSPHGFFSC 505
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 506 SRGVRQ 511
Score = 87.4 bits (215), Expect(2) = 1e-36
Identities = 43/76 (56%), Positives = 56/76 (73%)
Frame = -2
Query: 444 NASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILGR 265
N++F+ LIPK +DA ++ +FRPI ++NFLFKII KILA RL ++ +SP Q FI GR
Sbjct: 363 NSNFLVLIPKVEDAISMTHFRPIALANFLFKIIPKILAVRLSHVVQRIISPHQAAFIPGR 422
Query: 264 QIHDCIAMVSEGFNVL 217
I DCI +VSE FNVL
Sbjct: 423 XITDCIGLVSECFNVL 438
>dbj|GAU39008.1| hypothetical protein TSUD_378840 [Trifolium subterraneum]
Length = 906
Score = 92.8 bits (229), Expect(2) = 1e-36
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL+W FLL VL+ FGF+E+F +W+ VIL+SS +S+ +NG G
Sbjct: 141 SFGGNLALKIDITKAFDTLEWSFLLKVLKSFGFNEVFCNWIQVILQSSFLSISINGKSHG 200
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 201 YFNCTRGVRQ 210
Score = 88.2 bits (217), Expect(2) = 1e-36
Identities = 41/81 (50%), Positives = 59/81 (72%)
Frame = -2
Query: 450 GLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFIL 271
G N++ +AL+PKT +A +I+ +RPI M+NF FK+I+KI+A RLGSI+ +S Q GFI
Sbjct: 60 GFNSNIIALLPKTPEATSIDQYRPIAMANFKFKVISKIIADRLGSIMPNLVSEEQKGFIN 119
Query: 270 GRQIHDCIAMVSEGFNVLHGR 208
GR I DC+ + SE N+LH +
Sbjct: 120 GRNIKDCLCIASEAANLLHNK 140
>ref|XP_008348238.1| PREDICTED: uncharacterized protein LOC103411380 [Malus domestica]
Length = 1384
Score = 92.8 bits (229), Expect(2) = 2e-36
Identities = 43/66 (65%), Positives = 51/66 (77%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
NM +K DI KAFDTL W FLL VL FGFS FI WV ILRS+++S+L+NG+P G+FSC
Sbjct: 579 NMGVKXDIAKAFDTLDWSFLLRVLTNFGFSTCFIDWVSTILRSAKLSILINGSPHGFFSC 638
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 639 SRGVRQ 644
Score = 87.8 bits (216), Expect(2) = 2e-36
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = -2
Query: 444 NASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILGR 265
N++F+ LIPK +DA ++ +FRPI ++NFLFKII KILA RL ++ +SP Q FI GR
Sbjct: 496 NSNFLVLIPKVEDAISMTHFRPIALANFLFKIIPKILAXRLSHVVQRIISPHQAAFIPGR 555
Query: 264 QIHDCIAMVSEGFNVL 217
+I DCI +VSE FNVL
Sbjct: 556 RITDCIGLVSECFNVL 571
>ref|XP_008366056.1| PREDICTED: uncharacterized protein LOC103429702 [Malus domestica]
Length = 750
Score = 94.0 bits (232), Expect(2) = 4e-36
Identities = 43/66 (65%), Positives = 52/66 (78%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
NM +K+DI KAFDTL W FLL VL FGFS FI WV ILRS+++S+L+NG+P G+FSC
Sbjct: 579 NMGVKVDIAKAFDTLDWSFLLRVLTNFGFSTCFIDWVXTILRSAKLSILINGSPHGFFSC 638
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 639 SRGVRQ 644
Score = 85.5 bits (210), Expect(2) = 4e-36
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 444 NASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILGR 265
N++F+ LIPK + A ++ +FRPI ++NFLFKII KILA RL ++ +SP Q FI GR
Sbjct: 496 NSNFLVLIPKVEXAISMTHFRPIALANFLFKIIPKILAVRLSHVVQRIISPHQAAFIPGR 555
Query: 264 QIHDCIAMVSEGFNVL 217
+I DCI +VSE FNVL
Sbjct: 556 RITDCIGLVSECFNVL 571
>gb|PNX90569.1| ribonuclease H, partial [Trifolium pratense]
Length = 309
Score = 92.0 bits (227), Expect(2) = 4e-36
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL W FLL VL+ FGF+E+F HW+ VIL+S+ +SV NG G
Sbjct: 155 SYGGNLALKIDITKAFDTLDWSFLLKVLKTFGFNEMFCHWIHVILKSAFLSVSFNGKSHG 214
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 215 YFNCTRGVRQ 224
Score = 87.4 bits (215), Expect(2) = 4e-36
Identities = 42/81 (51%), Positives = 59/81 (72%)
Frame = -2
Query: 450 GLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFIL 271
G N++ +ALIPKT DA++I+ +RPI M+NF FKII+KI+A RL SI+ + +S Q GFI
Sbjct: 74 GFNSNVIALIPKTPDASSIDQYRPIAMANFKFKIISKIIADRLASIMPSLISDEQKGFIH 133
Query: 270 GRQIHDCIAMVSEGFNVLHGR 208
R I DC+ + SE N+LH +
Sbjct: 134 DRNIKDCLCIASEAANLLHNK 154
>gb|PNY06897.1| ribonuclease H, partial [Trifolium pratense]
Length = 821
Score = 93.2 bits (230), Expect(2) = 5e-36
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL+W FLL VLR FGF+E+F +W+ VIL+S+ +S+ +NG G
Sbjct: 327 SFGGNLALKIDISKAFDTLEWSFLLKVLRSFGFNEVFCNWIHVILKSAFLSISINGKSEG 386
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 387 YFNCSRGVRQ 396
Score = 85.9 bits (211), Expect(2) = 5e-36
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 8/102 (7%)
Frame = -2
Query: 489 CCPFFLY*LVLIF--------GLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKIL 334
C F +Y VL F G N++ +AL+PK DA +I +RPI M+NF FK+I+KI+
Sbjct: 225 CVKFDVYNAVLEFFTTGWILPGFNSNIIALLPKVSDATSIHQYRPIAMANFKFKVISKII 284
Query: 333 ATRLGSIIFAYLSPTQFGFILGRQIHDCIAMVSEGFNVLHGR 208
A RL I+ +S Q GFI R I DC+ + SE N+LH +
Sbjct: 285 ADRLAKIMPTIISEEQMGFIQDRNIKDCLCIASEAVNLLHNK 326
>gb|PNX71458.1| ribonuclease H, partial [Trifolium pratense]
Length = 782
Score = 92.0 bits (227), Expect(2) = 8e-36
Identities = 42/70 (60%), Positives = 53/70 (75%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL+W FLL VL FGF+E+F +W+ VILRS+ +S+ +NG G
Sbjct: 612 SFGGNLALKIDITKAFDTLEWSFLLKVLNSFGFNEVFCNWIHVILRSAFLSISINGKSHG 671
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 672 YFNCTRGVRQ 681
Score = 86.3 bits (212), Expect(2) = 8e-36
Identities = 40/81 (49%), Positives = 59/81 (72%)
Frame = -2
Query: 450 GLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFIL 271
G N++ +AL+PKT DA++I+ +RPI M+NF FK+ITKI+A RL SI+ + +S Q GFI
Sbjct: 531 GFNSNIIALLPKTPDASSIDQYRPIAMANFKFKVITKIIADRLASIMPSIVSEEQRGFIH 590
Query: 270 GRQIHDCIAMVSEGFNVLHGR 208
R I +C+ + SE N+LH +
Sbjct: 591 DRNIKECLCIASEAANLLHNK 611
>ref|XP_008375089.1| PREDICTED: uncharacterized protein LOC103438319 [Malus domestica]
Length = 1384
Score = 91.7 bits (226), Expect(2) = 1e-35
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = -1
Query: 199 NMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVGYFSC 20
NM +K DI KAFDTL W FLL VL FGFS FI WV ILRS+ +S+L+NG+P G+FSC
Sbjct: 579 NMGVKXDIAKAFDTLDWSFLLRVLTNFGFSTCFIDWVSTILRSAXLSILINGSPHGFFSC 638
Query: 19 FRGVRQ 2
RGVRQ
Sbjct: 639 SRGVRQ 644
Score = 86.3 bits (212), Expect(2) = 1e-35
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -2
Query: 444 NASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILGR 265
N++F+ LIPK +D ++ +FRPI ++NFLFKII KILA RL ++ +SP Q FI GR
Sbjct: 496 NSNFLVLIPKVEDXISMTHFRPIALANFLFKIIPKILAVRLSHVVQRIISPHQAAFIPGR 555
Query: 264 QIHDCIAMVSEGFNVL 217
+I DCI +VSE FNVL
Sbjct: 556 RITDCIGLVSECFNVL 571
>gb|PNX83244.1| ribonuclease H, partial [Trifolium pratense]
Length = 412
Score = 96.3 bits (238), Expect(2) = 2e-35
Identities = 45/70 (64%), Positives = 56/70 (80%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDIRKAFDTL W+FLL VL++FGFS++F W+ IL S+R+SVL+NG VG
Sbjct: 97 SFAGNIALKIDIRKAFDTLDWNFLLAVLKQFGFSDVFCSWIHEILISARLSVLVNGKSVG 156
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 157 YFNCTRGVRQ 166
Score = 80.5 bits (197), Expect(2) = 2e-35
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = -2
Query: 447 LNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILG 268
+N++ + LIPK+ +A+ IEN+RPI ++NF FK+ITKILA RL +SP Q GFI
Sbjct: 17 INSNLLVLIPKSPEADRIENYRPIALANFQFKLITKILADRLSLAASKIISPEQRGFIPE 76
Query: 267 RQIHDCIAMVSEGFNVL 217
R I DC+ + SE NVL
Sbjct: 77 RHIADCVIIASEAINVL 93
>gb|ABN09154.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 528
Score = 94.7 bits (234), Expect(2) = 3e-35
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ K+DI KAFDTL W FLL VL++FGFSE F +W+D IL+S+++S+ +NG+ G
Sbjct: 252 SFGGNLAFKVDISKAFDTLNWKFLLKVLKQFGFSETFCNWIDAILQSAKLSICINGSQQG 311
Query: 31 YFSCFRGVRQ 2
YFSC RGVRQ
Sbjct: 312 YFSCSRGVRQ 321
Score = 81.6 bits (200), Expect(2) = 3e-35
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = -2
Query: 444 NASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILGR 265
NA+ + LIPKT++A++++ FRPI M+NF FKII+KILA RL I+ +S Q GFI GR
Sbjct: 173 NANTLILIPKTQNADSMDQFRPIAMANFKFKIISKILADRLAQIMPNIVSQEQRGFIQGR 232
Query: 264 QIHDCIAMVSEGFNVL 217
I DC+ + SE N+L
Sbjct: 233 NIKDCVCLASEAINML 248
>dbj|GAU20518.1| hypothetical protein TSUD_130760 [Trifolium subterraneum]
Length = 1050
Score = 88.2 bits (217), Expect(2) = 4e-35
Identities = 42/70 (60%), Positives = 51/70 (72%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL W+FLL VL++FGF E F W+ IL S+R+SVL+NG G
Sbjct: 336 SYAGNIALKIDISKAFDTLDWNFLLAVLKQFGFGETFCSWITEILHSARLSVLVNGKLTG 395
Query: 31 YFSCFRGVRQ 2
+F C RGVRQ
Sbjct: 396 FFPCSRGVRQ 405
Score = 87.8 bits (216), Expect(2) = 4e-35
Identities = 44/77 (57%), Positives = 55/77 (71%)
Frame = -2
Query: 447 LNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFILG 268
LN++ + LIPKT +A+ IENFRPI ++NF FKIITKILA RL S+ +SP Q GFI
Sbjct: 256 LNSNILILIPKTPEADCIENFRPIALANFQFKIITKILADRLSSVASRIVSPHQRGFIPD 315
Query: 267 RQIHDCIAMVSEGFNVL 217
R I DC+ + SE NVL
Sbjct: 316 RHIADCVIIASEAVNVL 332
>gb|PNX94425.1| ribonuclease H, partial [Trifolium pratense]
Length = 1176
Score = 90.5 bits (223), Expect(2) = 7e-35
Identities = 40/70 (57%), Positives = 54/70 (77%)
Frame = -1
Query: 211 SMDANMILKIDIRKAFDTLKWDFLLHVLRRFGFSEIFIHWVDVILRSSRISVLLNGTPVG 32
S N+ LKIDI KAFDTL+W FLL VL+ FGF+++F +W+ VIL+S+ +S+ +NG G
Sbjct: 511 SFGGNLALKIDISKAFDTLEWSFLLKVLKCFGFNDVFCNWIHVILKSAYLSISINGKSEG 570
Query: 31 YFSCFRGVRQ 2
YF+C RGVRQ
Sbjct: 571 YFNCSRGVRQ 580
Score = 84.7 bits (208), Expect(2) = 7e-35
Identities = 37/81 (45%), Positives = 58/81 (71%)
Frame = -2
Query: 450 GLNASFMALIPKTKDANAIENFRPIVMSNFLFKIITKILATRLGSIIFAYLSPTQFGFIL 271
G N++ +AL+PKT +A +I+ +RPI M+NF FK+I+KI+A RL +++ + +S Q GFI
Sbjct: 430 GFNSNIIALLPKTSNATSIDQYRPIAMANFKFKVISKIIADRLATVMPSIISEEQMGFIH 489
Query: 270 GRQIHDCIAMVSEGFNVLHGR 208
R I DC+ + SE N+LH +
Sbjct: 490 DRNIKDCLCIASEAVNLLHNK 510