BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00038753
         (905 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   152   3e-70
gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposo...   155   4e-69
gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposo...   158   5e-67
gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposo...   150   6e-67
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo...   153   1e-66
gb|PNY02796.1| copia protein (gag-int-pol protein), partial [Tri...   147   1e-66
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo...   152   2e-66
dbj|GAU19483.1| hypothetical protein TSUD_77270 [Trifolium subte...   147   1e-65
gb|PNX92571.1| histone deacetylase [Trifolium pratense]               148   2e-65
gb|PNX76291.1| gag/pol polyprotein - maize retrotransposon Hopsc...   143   3e-65
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   145   3e-65
gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposo...   151   4e-65
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   145   6e-65
gb|KZV26181.1| hypothetical protein F511_06348 [Dorcoceras hygro...   145   7e-65
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo...   153   1e-64
gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposo...   155   1e-64
gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposo...   155   1e-64
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   144   2e-64
gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposo...   154   2e-64
dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subt...   140   5e-64

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  152 bits (383), Expect(2) = 3e-70
 Identities = 70/136 (51%), Positives = 95/136 (69%)
 Frame = -3

Query: 489  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
            +QNG  ERKHRHI+E G++L+A + +P +YWD+ F  S+YLINR+P   +  KS  EVL+
Sbjct: 660  EQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLF 719

Query: 309  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
             Q PSYS L++FGC C+P+ R +N  KL+ RS    FLGYS   KGYK L P G I+ SR
Sbjct: 720  HQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILISR 779

Query: 129  DVVFNEEIFPFLKTKN 82
            DV+F+E  FPF + ++
Sbjct: 780  DVIFDEXAFPFAQLQS 795



 Score =  143 bits (360), Expect(2) = 3e-70
 Identities = 71/142 (50%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
 Frame = -1

Query: 896 LDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGS 717
           L+ CN+  +NK     CS C + K HK  F  S    T+PL+LIHTDLWGP+   SS+G 
Sbjct: 523 LNKCNLPHLNKIPSLICSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGH 582

Query: 716 NYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTK 540
            YY+ FID +++F WIY L+ +S+ F VFLHFKS VE Q   +IK VQSD G E +  T+
Sbjct: 583 QYYIHFIDAYSRFTWIYMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQ 642

Query: 539 TFSECGIIHQISCPYTPNKMGL 474
             +  GIIH+ISCPYT  + GL
Sbjct: 643 YLTSNGIIHRISCPYTHEQNGL 664


>gb|KYP75940.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1403

 Score =  155 bits (392), Expect(2) = 4e-69
 Identities = 78/159 (49%), Positives = 107/159 (67%), Gaps = 3/159 (1%)
 Frame = -3

Query: 489  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
            QQNGT ERKHRHI EVGL+L+++SG+P  +W D F  +I++INR+P   +G KS +EVL+
Sbjct: 636  QQNGTAERKHRHITEVGLTLLSSSGLPHIFWSDAFSTAIHVINRLPTPILGHKSPYEVLF 695

Query: 309  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
             + P Y  LR FGC C+PH R +N  K++ RS   VF+GYS Q KGYK     GKII SR
Sbjct: 696  NKIPDYLLLRPFGCACYPHLRPFNSHKMDFRSSQCVFIGYSMQHKGYKCFTTNGKIIISR 755

Query: 129  DVVFNEEIFP---FLKTKNSSIVLSQQNVQHLTPSIPIV 22
            +VVF+E+ FP   +  T N + + S  + Q + PSI ++
Sbjct: 756  NVVFDEDTFPGPSYFNTNNVAGLSSSHSPQPV-PSIHVL 793



 Score =  135 bits (341), Expect(2) = 4e-69
 Identities = 67/142 (47%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
 Frame = -1

Query: 896 LDACNVSS-INKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNG 720
           +  CNV   IN      C  C + KSH LPF  S      PL+L+++D+WGPS   S  G
Sbjct: 498 MKTCNVPMPINHQDSIVCKSCCIGKSHTLPFSDSYTVYNSPLELVYSDVWGPSHYASREG 557

Query: 719 SNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLT 543
             YYV F D F+K+ WIYF+  +S+T + F+HFKS+VENQ   +IKM QSDGG E   LT
Sbjct: 558 FRYYVHFTDAFSKYTWIYFMHNKSETAHHFIHFKSMVENQFGHKIKMFQSDGGKEFTCLT 617

Query: 542 KTFSECGIIHQISCPYTPNKMG 477
           K F+E GI H++SCP++  + G
Sbjct: 618 KLFNENGITHRLSCPHSHQQNG 639


>gb|KYP75416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 785

 Score =  158 bits (400), Expect(2) = 5e-67
 Identities = 78/157 (49%), Positives = 102/157 (64%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
            QNG +ERKHRHI+E+GL+++A + +P ++WD  F  S+YLINR+P+ +I     F  L+ 
Sbjct: 559  QNGVVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQNDVPFRKLFH 618

Query: 306  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
            Q P Y+ LRIFGC CFPH R YN +KL+ RSQ  VFLGYS   KGYK L P G+I  S+D
Sbjct: 619  QLPDYNFLRIFGCSCFPHLRPYNKNKLQFRSQECVFLGYSTSHKGYKCLAPTGRIFISKD 678

Query: 126  VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 16
            VVF E  FP+        +        LTPSIP+ L+
Sbjct: 679  VVFCETRFPY------PSLFPAPATNPLTPSIPVPLV 709



 Score =  125 bits (315), Expect(2) = 5e-67
 Identities = 58/145 (40%), Positives = 88/145 (60%), Gaps = 1/145 (0%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSS 726
           K     CN   INK    FC+ C + KSHKLP + S      P +LI++DLWGP+P+ S 
Sbjct: 418 KSVFRLCNFPIINKTASDFCTPCCLGKSHKLPSNSSKTVYHTPFELIYSDLWGPAPITSD 477

Query: 725 NGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKP 549
           NG  YYV F+D  T+F WI+ L+ ++ T +VF  F ++++NQ    IK +Q+D G E + 
Sbjct: 478 NGYQYYVTFVDAHTRFTWIFLLKRKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRS 537

Query: 548 LTKTFSECGIIHQISCPYTPNKMGL 474
            T   ++ GI H++ CP+T ++ G+
Sbjct: 538 FTSYLAQNGIQHRLICPHTHHQNGV 562


>gb|KYP71160.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1268

 Score =  150 bits (379), Expect(2) = 6e-67
 Identities = 67/131 (51%), Positives = 89/131 (67%)
 Frame = -3

Query: 486 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
           QNG +ERKHRHI+++G++L+ ++ +P  +WD  F  ++YLINR+P  ++ F   F VL+ 
Sbjct: 574 QNGVVERKHRHIVDIGITLLHHASLPLTFWDYAFSTAVYLINRLPTASLNFDIPFTVLFK 633

Query: 306 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
           Q P Y  L+ FGC CFP  R Y   KL+ RSQ  VFLGYSN  KGYK L   GKI  S+D
Sbjct: 634 QTPDYKFLKTFGCACFPFLRPYTTHKLDFRSQECVFLGYSNSHKGYKCLSASGKIYISKD 693

Query: 126 VVFNEEIFPFL 94
           V+FNE  FP+L
Sbjct: 694 VIFNETRFPYL 704



 Score =  133 bits (335), Expect(2) = 6e-67
 Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSS 726
           K  L+ CN++  N++   FCS C V KSH+LP   S    + PL LI TDLWGPS + S 
Sbjct: 433 KLVLNHCNIAPSNRNVSEFCSSCCVGKSHRLPSLVSESVYSAPLDLIFTDLWGPSHVVSH 492

Query: 725 NGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKP 549
           +G  YYV FID F+KF WIY L+++SDT +VF  FK++VE Q N +IK +QSD G E + 
Sbjct: 493 SGYVYYVSFIDAFSKFTWIYPLKSKSDTLSVFQQFKAMVELQLNTKIKSIQSDWGGEYRS 552

Query: 548 LTKTFSECGIIHQISCPYTPNKMGL 474
            T   +  GI H++ CP+T ++ G+
Sbjct: 553 FTAFLATHGITHRLICPHTHHQNGV 577


>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Trifolium pratense]
          Length = 1064

 Score =  153 bits (386), Expect(2) = 1e-66
 Identities = 71/154 (46%), Positives = 102/154 (66%), Gaps = 2/154 (1%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
            QNG +ERKHRHI+++GL+L++ + +P  YWD  F  ++YLINR+P+  + FK  + +L+ 
Sbjct: 713  QNGVVERKHRHIVDLGLTLLSQASLPLSYWDYAFLTAVYLINRLPSAPLDFKIPYTLLFH 772

Query: 306  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
            Q P Y  L++FGC CFP  R YN  KL+ RS   +FLGYS   KGY+ L P G++  S+D
Sbjct: 773  QDPDYKFLKVFGCACFPLLRPYNTHKLDYRSHECLFLGYSPSHKGYRCLSPNGRLFISKD 832

Query: 126  VVFNEEIFPF--LKTKNSSIVLSQQNVQHLTPSI 31
            V+FNE  FPF  L T   S+V S+ +   L+P +
Sbjct: 833  VIFNESRFPFIDLFTSPHSVVPSKSSAVTLSPLV 866



 Score =  130 bits (326), Expect(2) = 1e-66
 Identities = 61/146 (41%), Positives = 94/146 (64%), Gaps = 2/146 (1%)
 Frame = -1

Query: 905  KRALDACNVS-SINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQS 729
            K  L  C +  + NKD   FC+ C + K+HKL    S  + T PL+L+ +DLWGPSP  S
Sbjct: 571  KLVLQHCKIPFNSNKDVSTFCTACCMGKAHKLHSLPSHTQYTHPLELVFSDLWGPSPQPS 630

Query: 728  SNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELK 552
            + G NYY+ F+D +++F WIY L+++SD F +F  FK++VE Q    +K +Q+D G E +
Sbjct: 631  TLGYNYYITFVDAYSRFTWIYLLKSKSDAFIIFKQFKAMVELQFGHSLKALQTDWGGEFR 690

Query: 551  PLTKTFSECGIIHQISCPYTPNKMGL 474
            P TK   + G+IH++ CP+T ++ G+
Sbjct: 691  PFTKFLKDLGVIHRLICPHTHHQNGV 716


>gb|PNY02796.1| copia protein (gag-int-pol protein), partial [Trifolium pratense]
          Length = 1009

 Score =  147 bits (372), Expect(2) = 1e-66
 Identities = 72/143 (50%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
 Frame = -1

Query: 902 RALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSN 723
           + L  CNV + + D   FC  C   K H LPF  S     EPL LIHTD+WGP+P+ S++
Sbjct: 181 KVLKHCNVKTSSSDQFKFCEACQFGKLHLLPFKSSYSHAQEPLDLIHTDVWGPAPIMSNS 240

Query: 722 GSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPL 546
           G  YYV FID F++F WIY L+ +S+T + F  FK+LVENQ NKRIK+VQ DGG E K +
Sbjct: 241 GFKYYVHFIDDFSRFTWIYPLKQKSETIHAFTQFKTLVENQFNKRIKIVQCDGGGEYKAV 300

Query: 545 TKTFSECGIIHQISCPYTPNKMG 477
            K   E GI  ++SCPYT  + G
Sbjct: 301 QKLALEAGIQFRMSCPYTSQQNG 323



 Score =  135 bits (340), Expect(2) = 1e-66
 Identities = 68/156 (43%), Positives = 98/156 (62%)
 Frame = -3

Query: 489 QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
           QQNG  ERKHRH+ E+GL+++A + +P  YW + F  S+YLINR+P+        + ++Y
Sbjct: 320 QQNGRAERKHRHVAELGLTMLAQARMPLCYWWEAFSTSVYLINRLPSSINQNACPYTLIY 379

Query: 309 AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
            + P YS L+ FGC C+P  + YN  KL+  +   VFLGYSN  KGYK +   G+I  SR
Sbjct: 380 KKEPDYSVLKPFGCACYPCLKPYNKHKLQFHTTRCVFLGYSNSHKGYKCINSHGRIFVSR 439

Query: 129 DVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIV 22
            VVFNEE FPF    +   + ++  ++ LTP+ PI+
Sbjct: 440 HVVFNEEHFPF----HDGFLDTRNPLRTLTPNDPIL 471


>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  152 bits (383), Expect(2) = 2e-66
 Identities = 65/130 (50%), Positives = 96/130 (73%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
            QNGT+ER+HRHI+E+GL+++ +S +P  +WD  F  + YLINR+P+ ++GF+S +++++ 
Sbjct: 657  QNGTVERRHRHIVELGLAMLHHSTLPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHH 716

Query: 306  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
            + P Y+ L++FGC CFP  R YN  KL+PRS+  VFLGYS   KGYK L   G+I  S+D
Sbjct: 717  KDPDYTFLKVFGCSCFPLLRPYNQHKLQPRSEECVFLGYSPLHKGYKCLSKSGRIYISKD 776

Query: 126  VVFNEEIFPF 97
            V+FNE  FP+
Sbjct: 777  VIFNEGRFPY 786



 Score =  130 bits (327), Expect(2) = 2e-66
 Identities = 63/145 (43%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
 Frame = -1

Query: 902 RALDACNVS--SINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQS 729
           RAL  CN+   ++NK    FC  C ++KSH+LP H S    ++PL+L+  D+WGP+ L+S
Sbjct: 516 RALQTCNIRLPTVNKIS-DFCDSCCIAKSHRLPSHPSTTIYSKPLELVFLDVWGPASLES 574

Query: 728 SNGSNYYVVFIDF-TKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELK 552
           S G  Y++  +D  TK++WIY LR +SD F+ F +FK+L E Q    +K VQ+DGG E +
Sbjct: 575 SCGYLYFLTCVDACTKYVWIYLLRRKSDVFSNFQNFKALAEKQFQLPLKSVQTDGGGEFR 634

Query: 551 PLTKTFSECGIIHQISCPYTPNKMG 477
            L   F + GI+H+++CPYT ++ G
Sbjct: 635 ALISFFQQEGILHRLTCPYTHHQNG 659


>dbj|GAU19483.1| hypothetical protein TSUD_77270 [Trifolium subterraneum]
          Length = 1353

 Score =  147 bits (371), Expect(2) = 1e-65
 Identities = 68/143 (47%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
 Frame = -1

Query: 902 RALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSN 723
           + L++C V     D   FC  C   K H LPF  S     EPL+L+HTD+WGP+P+ +S+
Sbjct: 450 KVLESCKVKVPPSDNFSFCEACQYGKMHLLPFKSSSSHAQEPLELVHTDVWGPAPIMTSS 509

Query: 722 GSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPL 546
           G  YYV F+D F++F WIY L+ +S+T   F+ FK+L ENQ NKRIK++Q DGG E KP+
Sbjct: 510 GFKYYVHFVDDFSRFTWIYPLKQKSETVQAFIQFKNLTENQFNKRIKVIQCDGGGEYKPV 569

Query: 545 TKTFSECGIIHQISCPYTPNKMG 477
            K   E GI  ++SCPYT  + G
Sbjct: 570 QKLAVEAGIQFRMSCPYTSQQNG 592



 Score =  132 bits (332), Expect(2) = 1e-65
 Identities = 62/131 (47%), Positives = 85/131 (64%)
 Frame = -3

Query: 489 QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
           QQNG  ERKHRHI E GL+L+A + +P  YW + F  ++YLINR+P++    +S + ++ 
Sbjct: 589 QQNGRAERKHRHITEFGLTLLAQAQMPLHYWWEAFSTAVYLINRLPSQVTQNESPYSLML 648

Query: 309 AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
            + P Y  L+ FGC C+P  + YN  KL+  +   VFLGYSN  KGYK L   G+I  SR
Sbjct: 649 QKEPDYKLLKTFGCACYPCLKPYNQHKLQYHTTRCVFLGYSNSHKGYKCLNSHGRIFISR 708

Query: 129 DVVFNEEIFPF 97
            V+FNE+ FPF
Sbjct: 709 HVIFNEDHFPF 719


>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
          Length = 1488

 Score =  148 bits (373), Expect(2) = 2e-65
 Identities = 64/130 (49%), Positives = 94/130 (72%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
            QNG +ERKHRHI+++GL+L++ + +P  +WD  FP ++YLINR+P+ +I F++ + +L+ 
Sbjct: 721  QNGVVERKHRHIVDLGLTLLSQATLPITFWDYAFPTAVYLINRLPSSSINFQTPYFLLFK 780

Query: 306  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
            Q P Y  L++FGC CFP  R Y+  KLE RSQ  +FLGYS   KGY+ L P G++  S+D
Sbjct: 781  QHPDYHFLKVFGCACFPLLRPYHNHKLEFRSQECLFLGYSPSHKGYRCLSPSGRLYVSKD 840

Query: 126  VVFNEEIFPF 97
            V+FNE  FP+
Sbjct: 841  VLFNESRFPY 850



 Score =  130 bits (328), Expect(2) = 2e-65
 Identities = 61/147 (41%), Positives = 94/147 (63%), Gaps = 3/147 (2%)
 Frame = -1

Query: 905  KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETT--EPLQLIHTDLWGPSPLQ 732
            K  +  CN +  NKD   FC+ C + K+H+L  H  +  TT   PL+L++ DLWGPSP  
Sbjct: 580  KLVMQHCNFTVNNKDSSQFCAACCMGKAHRL--HSPLSHTTYSAPLELVYCDLWGPSPSP 637

Query: 731  SSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTEL 555
            S  G +YY+ F+D ++KF WIY L+++SD   +F  FKS+VE Q    +K +Q+D G E 
Sbjct: 638  SKQGYHYYISFVDAYSKFTWIYLLKSKSDALLIFKQFKSMVELQFGHPLKALQTDWGGEF 697

Query: 554  KPLTKTFSECGIIHQISCPYTPNKMGL 474
            +P TK  +E G++H++ CP+T ++ G+
Sbjct: 698  RPFTKFLTELGVVHRLICPHTHHQNGV 724


>gb|PNX76291.1| gag/pol polyprotein - maize retrotransposon Hopscotch, partial
           [Trifolium pratense]
          Length = 835

 Score =  143 bits (360), Expect(2) = 3e-65
 Identities = 70/141 (49%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
 Frame = -1

Query: 896 LDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGS 717
           L +CNV     D   FC  C   K H LPF  S     E L+L+HTD+WGP+P+ SS+G 
Sbjct: 459 LKSCNVKLSPSDQFSFCEACQYGKMHFLPFKTSFSHAKEILELVHTDVWGPAPIISSSGF 518

Query: 716 NYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTK 540
            YYV FID FT+F WIY L+ +SDT + F+ FK++VENQ +K+IK +Q DGG E KP+ K
Sbjct: 519 KYYVHFIDDFTRFTWIYPLKQKSDTAHAFIQFKNMVENQFSKKIKTIQCDGGGEYKPVQK 578

Query: 539 TFSECGIIHQISCPYTPNKMG 477
              E GI  ++SCPYT  + G
Sbjct: 579 HAIEAGIQFRMSCPYTSQQNG 599



 Score =  135 bits (340), Expect(2) = 3e-65
 Identities = 64/131 (48%), Positives = 86/131 (65%)
 Frame = -3

Query: 489 QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
           QQNG  ERKHRHI E GL+L+A + +P  YW + F  ++YLINR+P+     KS + +L+
Sbjct: 596 QQNGRAERKHRHIAEFGLTLLAQAKMPLNYWWEAFSTAVYLINRLPSSVTHNKSPYSLLH 655

Query: 309 AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
            + P Y+ L+ FGC C+P  + YN  KL+  +   VFLGYSN  KGYK +   G+I  SR
Sbjct: 656 KREPDYNSLKPFGCACYPFLKPYNKHKLQFHTTRCVFLGYSNSHKGYKCVNSHGRIFISR 715

Query: 129 DVVFNEEIFPF 97
            VVFNE+ FPF
Sbjct: 716 HVVFNEDHFPF 726


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  145 bits (367), Expect(2) = 3e-65
 Identities = 72/155 (46%), Positives = 99/155 (63%), Gaps = 3/155 (1%)
 Frame = -3

Query: 489  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
            QQNG  ERKHR I+E GL+L+  + +P ++WD+ F   +YL NR+P   +  K   EVL+
Sbjct: 677  QQNGVAERKHRTIVEHGLTLLHTASLPLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLF 736

Query: 309  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
               P YS L++FGC CFP+ R YN  KL+ RS+   FLGYS + KGYK +   G++  S 
Sbjct: 737  KSIPDYSFLKVFGCSCFPNLRPYNTHKLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISH 796

Query: 129  DVVFNEEIFPFLKT-KNSSIVLS--QQNVQHLTPS 34
            DV+FNE  FP+ KT + SS +LS    +  HL+PS
Sbjct: 797  DVIFNETSFPYSKTIQVSSCLLSTVSPSTSHLSPS 831



 Score =  132 bits (332), Expect(2) = 3e-65
 Identities = 62/145 (42%), Positives = 93/145 (64%), Gaps = 1/145 (0%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSS 726
           K  L  CNV+ INK    FCS C + K H+ PF  S    T+PL+LIH DLWGP+ + S+
Sbjct: 537 KNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLELIHLDLWGPTLVLSN 596

Query: 725 NGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKP 549
           +G  YY+ F+D F++F WI+ LR +S+    F++FK+ VE Q + +IK +Q+D G E + 
Sbjct: 597 SGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLKIKSLQTDWGGEFRA 656

Query: 548 LTKTFSECGIIHQISCPYTPNKMGL 474
                +E GI+H++SCP+T  + G+
Sbjct: 657 FQSYLAENGIVHRVSCPHTQQQNGV 681


>gb|KYP53274.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 839

 Score =  151 bits (381), Expect(2) = 4e-65
 Identities = 68/130 (52%), Positives = 90/130 (69%)
 Frame = -3

Query: 486 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
           QNG +ERKHRHI+E+GL+L+A + +P  +WD  F  S+YLINR+P+ +I     F  L+ 
Sbjct: 306 QNGVVERKHRHIVELGLTLLAQAHLPMHFWDYAFLTSVYLINRLPSSSIQQDVPFRKLFH 365

Query: 306 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
             P Y+ LR+FGC CFPH R YN +KL+ RSQ  VFLGYS   KGYK L P G++  S+D
Sbjct: 366 HLPDYNFLRVFGCSCFPHLRPYNKTKLQFRSQECVFLGYSTSHKGYKCLAPSGRVFISKD 425

Query: 126 VVFNEEIFPF 97
           V+F E  FP+
Sbjct: 426 VIFCENRFPY 435



 Score =  126 bits (317), Expect(2) = 4e-65
 Identities = 62/147 (42%), Positives = 92/147 (62%), Gaps = 3/147 (2%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLP--FHKSVHETTEPLQLIHTDLWGPSPLQ 732
           K     CN  +INK    FC+ C + KSHKLP    K+V+ T  P +LI++DLWGP+P+ 
Sbjct: 165 KSVFKLCNFPNINKSVSDFCTSCCLGKSHKLPSQLSKTVYHT--PFELIYSDLWGPAPVL 222

Query: 731 SSNGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTEL 555
           S NG  YYV F+D  T+F WI+ L++++ T +VF  F ++V NQ    IK +Q+D G E 
Sbjct: 223 SDNGYQYYVTFVDAHTRFTWIFMLKSKAHTLDVFKQFHAMVRNQFQLPIKAIQTDWGGEF 282

Query: 554 KPLTKTFSECGIIHQISCPYTPNKMGL 474
           +  T   ++ GI H+I CP+T ++ G+
Sbjct: 283 RSFTSYLAQHGIHHRIICPHTHHQNGV 309


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  145 bits (366), Expect(2) = 6e-65
 Identities = 69/158 (43%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIG-FKSHFEVLY 310
            QNGT+ERKHRHI+E+GL+L++++ +P ++WD  F  ++YLINR+P+  I  F+S +  L+
Sbjct: 653  QNGTVERKHRHIVEMGLTLLSHAALPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALH 712

Query: 309  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
               P YS +++FGC CFPH R YN  KL+ RS   V+LG S Q KG+K L   G+I  S+
Sbjct: 713  QSQPDYSQIKVFGCLCFPHLRPYNNHKLQYRSSPCVYLGVSPQHKGHKCLDATGRIYISK 772

Query: 129  DVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 16
            DV+F+E  FP+L     S+  S  +  H++ + P  ++
Sbjct: 773  DVIFHESQFPYL-----SLFASSSSNSHMSHTYPAQIL 805



 Score =  132 bits (331), Expect(2) = 6e-65
 Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSS 726
           K  L+ CN+   NK     C+ C + KSH+L    S    T+P ++IH DLWGP+P  S 
Sbjct: 512 KNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVSY 571

Query: 725 NGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKP 549
            G +YY+ F+D +TKF WIYFL+A+SD    F  FK+L++NQ    IK +QSD G E + 
Sbjct: 572 YGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGEFRA 631

Query: 548 LTKTFSECGIIHQISCPYTPNKMG 477
            T   +E GI H+++CP+T ++ G
Sbjct: 632 FTALLNELGIQHRLTCPHTSHQNG 655


>gb|KZV26181.1| hypothetical protein F511_06348 [Dorcoceras hygrometricum]
          Length = 706

 Score =  145 bits (366), Expect(2) = 7e-65
 Identities = 66/126 (52%), Positives = 88/126 (69%)
 Frame = -3

Query: 489 QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
           +QNG +ERKHRH+++ GLSL+A++ +P  +W+D F +++YLINR+P+ ++G KS F  LY
Sbjct: 581 KQNGVVERKHRHVVDTGLSLLAHASLPFEFWEDAFFSAVYLINRLPSPSLGAKSPFFCLY 640

Query: 309 AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
            + P YSHLR+FGC CFP  R YN  KL  RS    FLGYS   KGYK L   G++  SR
Sbjct: 641 GRRPDYSHLRVFGCLCFPCLRPYNTHKLAFRSTPCTFLGYSEHHKGYKCLHSSGRVYISR 700

Query: 129 DVVFNE 112
            V FNE
Sbjct: 701 HVQFNE 706



 Score =  131 bits (330), Expect(2) = 7e-65
 Identities = 58/145 (40%), Positives = 90/145 (62%), Gaps = 1/145 (0%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSS 726
           K+ L  CN      D + FCS C + K+H LPF +S    + P +++++DLWGP+ + S 
Sbjct: 441 KQVLLDCNERISKNDNISFCSSCQLGKNHLLPFPQSTTNFSAPFEVVYSDLWGPAHIPSR 500

Query: 725 NGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKP 549
           NGS YY+ F+D +T++ WIYFL+ +S+    F++F+   E   N +IK +Q+DGG E + 
Sbjct: 501 NGSRYYISFVDAYTRYTWIYFLKLKSEVTQTFINFQKYTELHFNAKIKTLQTDGGGEFRS 560

Query: 548 LTKTFSECGIIHQISCPYTPNKMGL 474
           LT      GI+H+ SCPYT  + G+
Sbjct: 561 LTAYCQSNGILHRFSCPYTSKQNGV 585


>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 488

 Score =  153 bits (386), Expect(2) = 1e-64
 Identities = 69/142 (48%), Positives = 101/142 (71%), Gaps = 4/142 (2%)
 Frame = -3

Query: 486 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
           QNGT+ER+HRHI+E+GL+++ +S +P  +WD  F  + YLINR+P+ ++GF+S +++++ 
Sbjct: 155 QNGTVERRHRHIVELGLAMLHHSALPLNFWDHAFLTATYLINRLPSSSVGFQSPYKLIHN 214

Query: 306 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
           + P Y+ L+IFGC CFP  R YN  K++PRS+  VFLGYS   KGYK L   G+I  S+D
Sbjct: 215 KDPDYAFLKIFGCSCFPLLRPYNQHKIQPRSEECVFLGYSPSHKGYKCLSRSGRIYISKD 274

Query: 126 VVFNEEIFP----FLKTKNSSI 73
           V+FNE  FP    F+ T  +SI
Sbjct: 275 VIFNEGRFPYNDLFVTTTQASI 296



 Score =  123 bits (309), Expect(2) = 1e-64
 Identities = 60/145 (41%), Positives = 93/145 (64%), Gaps = 3/145 (2%)
 Frame = -1

Query: 902 RALDACNVS--SINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQS 729
           +AL  CN+   ++NK    FC  C ++KSH+LP   S    ++PL+L+  D+WGP+ L+S
Sbjct: 14  KALQTCNIRLPTVNKIS-DFCDSCCIAKSHRLPSQPSTTIYSKPLELVFLDVWGPASLES 72

Query: 728 SNGSNYYVVFIDF-TKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELK 552
           S G  Y++  +D  TK++WIY LR +SD  + F +FK+L E Q    +K VQ+DGG E +
Sbjct: 73  SCGYLYFLTCVDACTKYVWIYLLRRKSDVSSNFQNFKALAEKQFQTPLKFVQTDGGGEFR 132

Query: 551 PLTKTFSECGIIHQISCPYTPNKMG 477
            L   F + GI+H+++CPYT ++ G
Sbjct: 133 TLIPFFQQEGILHRLTCPYTHHQNG 157


>gb|KYP46257.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1408

 Score =  155 bits (392), Expect(2) = 1e-64
 Identities = 77/156 (49%), Positives = 100/156 (64%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
            QNG  ERKHRHI+E+GL+LMA + +P ++WD  F  ++YLINR+P+ +I     +  L+ 
Sbjct: 655  QNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFH 714

Query: 306  QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
            QPP Y  LRIFGC CFPH R YN  KL+ RSQ  VFLGYS   KGYK L   G++  S+D
Sbjct: 715  QPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKD 774

Query: 126  VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 19
            VVFNE  FP+    +SS     Q    L  S+P+ +
Sbjct: 775  VVFNETKFPYKDLFSSSKASDSQ----LPISVPLTI 806



 Score =  120 bits (302), Expect(2) = 1e-64
 Identities = 55/138 (39%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
 Frame = -1

Query: 884 NVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYV 705
           N+  ++ +   FC+ C + KSH+LP + S      P  L+++DLWGP+P+ S+ G  YYV
Sbjct: 521 NIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYV 580

Query: 704 VFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSE 528
            F+D  T+F WIY L++++ TFNVF  F ++V+NQ +  IK +Q+D G E +  T   +E
Sbjct: 581 TFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNE 640

Query: 527 CGIIHQISCPYTPNKMGL 474
            GI H++ CP+T ++ G+
Sbjct: 641 VGIQHRLICPHTHHQNGV 658


>gb|KYP61341.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1073

 Score =  155 bits (392), Expect(2) = 1e-64
 Identities = 77/156 (49%), Positives = 100/156 (64%)
 Frame = -3

Query: 486 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
           QNG  ERKHRHI+E+GL+LMA + +P ++WD  F  ++YLINR+P+ +I     +  L+ 
Sbjct: 320 QNGVAERKHRHIVELGLTLMAQAELPMQFWDHSFLTAVYLINRLPSSSIQNAVPYHKLFH 379

Query: 306 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
           QPP Y  LRIFGC CFPH R YN  KL+ RSQ  VFLGYS   KGYK L   G++  S+D
Sbjct: 380 QPPDYLSLRIFGCSCFPHLRPYNKHKLQFRSQECVFLGYSTSHKGYKCLAADGRLYISKD 439

Query: 126 VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVL 19
           VVFNE  FP+    +SS     Q    L  S+P+ +
Sbjct: 440 VVFNETKFPYKDLFSSSKASDSQ----LPISVPLTI 471



 Score =  120 bits (302), Expect(2) = 1e-64
 Identities = 55/138 (39%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
 Frame = -1

Query: 884 NVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSNGSNYYV 705
           N+  ++ +   FC+ C + KSH+LP + S      P  L+++DLWGP+P+ S+ G  YYV
Sbjct: 186 NIQLVSNNKSNFCTPCCLGKSHRLPSNLSRTIYNTPFDLVYSDLWGPAPVTSTCGYQYYV 245

Query: 704 VFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKTFSE 528
            F+D  T+F WIY L++++ TFNVF  F ++V+NQ +  IK +Q+D G E +  T   +E
Sbjct: 246 TFVDAHTRFTWIYLLKSKAQTFNVFKQFHAMVKNQYHHPIKALQTDWGGEYRSFTTYLNE 305

Query: 527 CGIIHQISCPYTPNKMGL 474
            GI H++ CP+T ++ G+
Sbjct: 306 VGIQHRLICPHTHHQNGV 323


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  144 bits (362), Expect(2) = 2e-64
 Identities = 68/158 (43%), Positives = 105/158 (66%), Gaps = 1/158 (0%)
 Frame = -3

Query: 486  QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIG-FKSHFEVLY 310
            QNGT+ERKHRHI+E+GL+L++++ +P ++WD  F  ++YLINR+P+  I  F+S +  L+
Sbjct: 653  QNGTVERKHRHIVEMGLTLLSHADLPLKFWDHSFTQAVYLINRLPSSAIPLFQSPYHALH 712

Query: 309  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
               P YS +++FGC CFPH R YN  KL+ +S   V+LG S Q KG+K L   G+I  S+
Sbjct: 713  QSQPDYSQIKVFGCLCFPHLRPYNNHKLQYKSSPCVYLGVSPQHKGHKCLDATGRIYISK 772

Query: 129  DVVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 16
            DV+F+E  FP+L     S+  S  +  H++ + P  ++
Sbjct: 773  DVIFHESQFPYL-----SLFASSSSNSHMSHTYPAQIL 805



 Score =  132 bits (331), Expect(2) = 2e-64
 Identities = 62/144 (43%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
 Frame = -1

Query: 905 KRALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSS 726
           K  L+ CN+   NK     C+ C + KSH+L    S    T+P ++IH DLWGP+P  S 
Sbjct: 512 KNILNLCNIPFSNKTATLPCTFCCMGKSHRLHSPLSNTVYTKPFEVIHCDLWGPAPFVSY 571

Query: 725 NGSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKP 549
            G +YY+ F+D +TKF WIYFL+A+SD    F  FK+L++NQ    IK +QSD G E + 
Sbjct: 572 YGYSYYITFVDTYTKFTWIYFLKAKSDALKAFTQFKALIQNQFQASIKAIQSDWGGEFRA 631

Query: 548 LTKTFSECGIIHQISCPYTPNKMG 477
            T   +E GI H+++CP+T ++ G
Sbjct: 632 FTALLNELGIQHRLTCPHTSHQNG 655


>gb|KYP75335.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 537

 Score =  154 bits (389), Expect(2) = 2e-64
 Identities = 78/157 (49%), Positives = 102/157 (64%)
 Frame = -3

Query: 486 QNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLYA 307
           QNG +ERKHRHI+E+GL+++A + +P ++WD  F  S+YLINR+P+ +I     F  L+ 
Sbjct: 195 QNGIVERKHRHIVELGLTMLAQAHLPMQFWDHAFLTSVYLINRLPSSSIQHDVPFRKLFH 254

Query: 306 QPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSRD 127
           Q P Y+ LRIFGC CFPH R YN +KL+ RSQ  VFLGYS   KGYK L P G+I  S+D
Sbjct: 255 QLPDYNFLRIFGCSCFPHLRPYNKNKLQLRSQECVFLGYSTSHKGYKCLAPTGRIFISKD 314

Query: 126 VVFNEEIFPFLKTKNSSIVLSQQNVQHLTPSIPIVLI 16
           V+F E  FP+     S    S  N    T SIP+ L+
Sbjct: 315 VIFCETRFPY----PSLFPASATNPP--TSSIPVPLV 345



 Score =  121 bits (303), Expect(2) = 2e-64
 Identities = 58/141 (41%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
 Frame = -1

Query: 887 CNVSSINKDGVPFCSDCVVSKSHKLP--FHKSVHETTEPLQLIHTDLWGPSPLQSSNGSN 714
           CN   INK    FC+ C + KSHKLP    K+V+ T  P +LI++DLW P+P+ S NG  
Sbjct: 60  CNFPIINKTVSDFCTPCRLGKSHKLPSTLSKTVYHT--PFELIYSDLWRPAPITSDNGYQ 117

Query: 713 YYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPLTKT 537
           YYV F+D  T+FIWI+  ++++ T +VF  F ++++NQ    IK +Q+D G E +  T  
Sbjct: 118 YYVTFVDAHTRFIWIFLFKSKAHTLDVFKQFHAMIQNQFQLPIKAIQTDWGGEFRSFTSY 177

Query: 536 FSECGIIHQISCPYTPNKMGL 474
            ++ GI H++ CP+T ++ G+
Sbjct: 178 LAQNGIQHRLICPHTHHQNGI 198


>dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subterraneum]
          Length = 1387

 Score =  140 bits (354), Expect(2) = 5e-64
 Identities = 68/143 (47%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
 Frame = -1

Query: 902 RALDACNVSSINKDGVPFCSDCVVSKSHKLPFHKSVHETTEPLQLIHTDLWGPSPLQSSN 723
           + L  CNV   + D   FC  C   K H LPF  S     EPL LIH+D+WGP+P+ S +
Sbjct: 450 KVLKDCNVKISHSDQFSFCEACQFGKLHLLPFKPSSSHVQEPLALIHSDVWGPAPILSPS 509

Query: 722 GSNYYVVFID-FTKFIWIYFLRAESDTFNVFLHFKSLVENQTNKRIKMVQSDGGTELKPL 546
           G  YYV FID F++F WI+ L+ +SDT + F+ FK+L ENQ NK+IK++Q DGG E K +
Sbjct: 510 GFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIKIIQCDGGGEYKAV 569

Query: 545 TKTFSECGIIHQISCPYTPNKMG 477
            K   E GI  ++SCPYT  + G
Sbjct: 570 QKVSIEAGIQFRMSCPYTSQQNG 592



 Score =  133 bits (335), Expect(2) = 5e-64
 Identities = 64/140 (45%), Positives = 91/140 (65%), Gaps = 4/140 (2%)
 Frame = -3

Query: 489  QQNGTMERKHRHIIEVGLSLMANSGVPQRYWDDCFPASIYLINRIPNKNIGFKSHFEVLY 310
            QQNG  ERKHRH+ E+GL+L+A + +P RYW + F  ++YLINR+P+     +S + +++
Sbjct: 589  QQNGRAERKHRHVAELGLTLLAQAKMPLRYWWEAFSTAVYLINRLPSSVNPNESPYSLMF 648

Query: 309  AQPPSYSHLRIFGCECFPHRRAYNISKLEPRSQSSVFLGYSNQFKGYKVLLPGGKIIYSR 130
             + P Y+ L+ FGC C+P  + YN  KL+  +   VF+GYSN  KGYK +   G+I  SR
Sbjct: 649  KREPDYNALKPFGCACYPCLKPYNQHKLQFHTTRCVFVGYSNSHKGYKCINSHGRIFVSR 708

Query: 129  DVVFNEEIFP----FLKTKN 82
             V+FNE  FP    FL TKN
Sbjct: 709  HVIFNENHFPFHGGFLDTKN 728