BLASTX nr result
ID: Rehmannia29_contig00038733
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00038733
(408 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly... 93 9e-31
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 99 2e-30
gb|PKI76596.1| hypothetical protein CRG98_002905 [Punica granatum] 94 6e-30
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo... 92 1e-29
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen... 96 2e-29
gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinen... 96 2e-29
gb|PKI37235.1| hypothetical protein CRG98_042387 [Punica granatum] 91 8e-29
gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposo... 94 2e-28
gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposo... 92 3e-28
gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposo... 92 3e-28
gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis] 93 2e-27
gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymera... 103 3e-27
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 89 8e-27
gb|KZV32632.1| putative LRR receptor-like serine/threonine-prote... 107 2e-26
gb|KYP60297.1| Retrovirus-related Pol polyprotein from transposo... 81 2e-26
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 86 2e-26
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 85 2e-26
gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposo... 84 3e-26
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 82 4e-26
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris] 83 5e-26
>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
1-94; Includes: RecName: Full=Protease; Includes:
RecName: Full=Reverse transcriptase; Includes: RecName:
Full=Endonuclease
emb|CAA32025.1| unnamed protein product [Nicotiana tabacum]
Length = 1328
Score = 93.2 bits (230), Expect(3) = 9e-31
Identities = 41/71 (57%), Positives = 53/71 (74%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+ PGKEHWEAVKW L YL+G CLC+ D IL GYTDAD++GD+ +RK
Sbjct: 1132 AVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRK 1191
Query: 82 FTSGFLYTFVG 50
++G+L+TF G
Sbjct: 1192 SSTGYLFTFSG 1202
Score = 55.8 bits (133), Expect(3) = 9e-31
Identities = 32/56 (57%), Positives = 36/56 (64%), Gaps = 8/56 (14%)
Frame = -1
Query: 408 NAKPVSIPLANPFIQGKDL--------GNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAKPVS PLA K + GN+ + VPYSS +GSLMYAMVCTRPDIA
Sbjct: 1077 NAKPVSTPLAGHLKLSKKMCPTTVEEKGNM--AKVPYSSAVGSLMYAMVCTRPDIA 1130
Score = 32.7 bits (73), Expect(3) = 9e-31
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G A+ WQS+LQKCVALS
Sbjct: 1200 FSGGAISWQSKLQKCVALS 1218
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 98.6 bits (244), Expect(3) = 2e-30
Identities = 43/71 (60%), Positives = 55/71 (77%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+S PGKEHW+AVKW L YL+G K+CLC+ + +LVGYTDAD++GD+ SRK
Sbjct: 1133 AVGVVSRFLSNPGKEHWDAVKWILRYLRGTSKLCLCFGEDNPVLVGYTDADMAGDVDSRK 1192
Query: 82 FTSGFLYTFVG 50
TSG+L F G
Sbjct: 1193 STSGYLINFSG 1203
Score = 47.4 bits (111), Expect(3) = 2e-30
Identities = 27/52 (51%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -1
Query: 402 KPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
K VS PLAN F D +PY+S +GSLMYAMVCTRPDIA
Sbjct: 1080 KAVSCPLANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIA 1131
Score = 34.3 bits (77), Expect(3) = 2e-30
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -2
Query: 65 LHFRGEAV*WQSRLQKCVALS 3
++F G AV WQS+LQKCVALS
Sbjct: 1199 INFSGGAVSWQSKLQKCVALS 1219
>gb|PKI76596.1| hypothetical protein CRG98_002905 [Punica granatum]
Length = 256
Score = 93.6 bits (231), Expect(3) = 6e-30
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
++G +S F+S PGKEHW AVKW L YL+G K+CL + LVGYTDAD+ GD+ SRK
Sbjct: 58 SIGVVSRFLSNPGKEHWNAVKWILRYLRGTSKVCLHFGTGKPELVGYTDADMVGDIDSRK 117
Query: 82 FTSGFLYTFVG 50
FTSG+L TF G
Sbjct: 118 FTSGYLMTFAG 128
Score = 52.0 bits (123), Expect(3) = 6e-30
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPF-IQGK-----DLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAKP+S PLA+ F + K + VPYSS +G+LMYAMVCTRPDIA
Sbjct: 3 NAKPISSPLASHFKLSSKQCLTSEKEKEEMKKVPYSSAVGNLMYAMVCTRPDIA 56
Score = 33.5 bits (75), Expect(3) = 6e-30
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G A+ WQSRLQKC+ALS
Sbjct: 126 FAGGAISWQSRLQKCIALS 144
>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1321
Score = 91.7 bits (226), Expect(3) = 1e-29
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S ++S PGK HWEAVKW L YL+G K+CL + IL GYTDAD++GDL RK
Sbjct: 1126 AVGVVSRYLSNPGKTHWEAVKWILRYLRGTSKLCLRFGGAKPILEGYTDADMAGDLDDRK 1185
Query: 82 FTSGFLYTFVG 50
TSG+++TF G
Sbjct: 1186 STSGYIFTFSG 1196
Score = 55.1 bits (131), Expect(3) = 1e-29
Identities = 30/51 (58%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = -1
Query: 408 NAKPVSIPLANPFIQGKDLGNVIA---SSVPYSSTIGSLMYAMVCTRPDIA 265
NAKPV PL F K I S++PYSS +GSLMYAMVCTRPDIA
Sbjct: 1074 NAKPVITPLVGHFKLSKKSCPTIREKMSTIPYSSAVGSLMYAMVCTRPDIA 1124
Score = 31.2 bits (69), Expect(3) = 1e-29
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G A+ WQS+LQKC++LS
Sbjct: 1194 FSGGAISWQSKLQKCISLS 1212
>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1340
Score = 95.5 bits (236), Expect(3) = 2e-29
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S ++S PG+EHWEAVKW L YL+G K+CLC+ + IL G+TDAD++GDL +RK
Sbjct: 1142 AVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFTDADLAGDLDNRK 1201
Query: 82 FTSGFLYTFVG 50
TS +L+TF G
Sbjct: 1202 STSAYLFTFSG 1212
Score = 48.9 bits (115), Expect(3) = 2e-29
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = -1
Query: 405 AKPVSIPLANPFIQGK------DLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
AK VS PL N F + + + +PYSS +GSLMYAMVCTRPDIA
Sbjct: 1088 AKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIA 1140
Score = 33.1 bits (74), Expect(3) = 2e-29
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQS+LQKCVALS
Sbjct: 1210 FSGGAVSWQSKLQKCVALS 1228
>gb|PRQ29843.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 501
Score = 95.5 bits (236), Expect(3) = 2e-29
Identities = 41/71 (57%), Positives = 55/71 (77%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S ++S PG+EHWEAVKW L YL+G K+CLC+ + IL G+TDAD++GDL +RK
Sbjct: 303 AVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGSEPILEGFTDADLAGDLDNRK 362
Query: 82 FTSGFLYTFVG 50
TS +L+TF G
Sbjct: 363 STSAYLFTFSG 373
Score = 48.9 bits (115), Expect(3) = 2e-29
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = -1
Query: 405 AKPVSIPLANPFIQGK------DLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
AK VS PL N F + + + +PYSS +GSLMYAMVCTRPDIA
Sbjct: 249 AKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIA 301
Score = 33.1 bits (74), Expect(3) = 2e-29
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQS+LQKCVALS
Sbjct: 371 FSGGAVSWQSKLQKCVALS 389
>gb|PKI37235.1| hypothetical protein CRG98_042387 [Punica granatum]
Length = 256
Score = 90.5 bits (223), Expect(3) = 8e-29
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
+VG +S F+S PGKEHW AVKW YL+G K+CL + LVGYTD D++GD+ SRK
Sbjct: 58 SVGVVSRFLSNPGKEHWNAVKWIPRYLRGTSKVCLHFGTSKPKLVGYTDTDMAGDIDSRK 117
Query: 82 FTSGFLYTFVGK 47
FTSG+L +F G+
Sbjct: 118 FTSGYLMSFAGR 129
Score = 50.1 bits (118), Expect(3) = 8e-29
Identities = 28/54 (51%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAKPVS P A+ F + VPY S +GSLMYAMVCTRPDIA
Sbjct: 3 NAKPVSSPFASQFKLSSKQCPTSEKEKKEMKKVPYLSAVGSLMYAMVCTRPDIA 56
Score = 34.7 bits (78), Expect(3) = 8e-29
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -2
Query: 65 LHFRGEAV*WQSRLQKCVALS 3
+ F G A+ WQSRLQKC+ALS
Sbjct: 124 MSFAGRAISWQSRLQKCIALS 144
>gb|KYP63120.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 501
Score = 94.0 bits (232), Expect(3) = 2e-28
Identities = 42/71 (59%), Positives = 53/71 (74%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F++ PG EHW AVKW L YL+G K CLC+ + +L GYTDAD++GD+ SRK
Sbjct: 303 AVGVVSRFLANPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLEGYTDADLAGDIDSRK 362
Query: 82 FTSGFLYTFVG 50
TSG+L TFVG
Sbjct: 363 STSGYLTTFVG 373
Score = 47.4 bits (111), Expect(3) = 2e-28
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = -1
Query: 402 KPVSIPLANPFIQGKDLGNVIA------SSVPYSSTIGSLMYAMVCTRPDIA 265
KPV+ PLA F +PYSS +GSLMYAM+CTRPDIA
Sbjct: 250 KPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIA 301
Score = 32.3 bits (72), Expect(3) = 2e-28
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQS+LQKCVALS
Sbjct: 371 FVGGAVSWQSKLQKCVALS 389
>gb|KYP76811.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 92.4 bits (228), Expect(3) = 3e-28
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F++ PG EHW AVKW L YL+G K CLC+ + +L GYTDAD++GD+ SRK
Sbjct: 1107 AVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRK 1166
Query: 82 FTSGFLYTFVG 50
TSG+L TF G
Sbjct: 1167 STSGYLTTFAG 1177
Score = 47.4 bits (111), Expect(3) = 3e-28
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = -1
Query: 402 KPVSIPLANPFIQGKDLGNVIA------SSVPYSSTIGSLMYAMVCTRPDIA 265
KPV+ PLA F +PYSS +GSLMYAM+CTRPDIA
Sbjct: 1054 KPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIA 1105
Score = 33.1 bits (74), Expect(3) = 3e-28
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQS+LQKCVALS
Sbjct: 1175 FAGGAVSWQSKLQKCVALS 1193
>gb|KYP76810.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1305
Score = 92.4 bits (228), Expect(3) = 3e-28
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F++ PG EHW AVKW L YL+G K CLC+ + +L GYTDAD++GD+ SRK
Sbjct: 1107 AVGVVSRFLADPGNEHWLAVKWILRYLRGTSKRCLCFGKGKPVLQGYTDADLAGDIDSRK 1166
Query: 82 FTSGFLYTFVG 50
TSG+L TF G
Sbjct: 1167 STSGYLTTFAG 1177
Score = 47.4 bits (111), Expect(3) = 3e-28
Identities = 25/52 (48%), Positives = 29/52 (55%), Gaps = 6/52 (11%)
Frame = -1
Query: 402 KPVSIPLANPFIQGKDLGNVIA------SSVPYSSTIGSLMYAMVCTRPDIA 265
KPV+ PLA F +PYSS +GSLMYAM+CTRPDIA
Sbjct: 1054 KPVNTPLAGHFRLSSKQSPTSEREMEEMKKIPYSSVVGSLMYAMICTRPDIA 1105
Score = 33.1 bits (74), Expect(3) = 3e-28
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQS+LQKCVALS
Sbjct: 1175 FAGGAVSWQSKLQKCVALS 1193
>gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]
Length = 855
Score = 92.8 bits (229), Expect(3) = 2e-27
Identities = 41/71 (57%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+S PGK HWEAVKW YL+G K+CL + IL G+TDAD++GDL SRK
Sbjct: 676 AVGVVSRFLSDPGKVHWEAVKWIFRYLRGTSKMCLSFGTTQTILEGFTDADMAGDLDSRK 735
Query: 82 FTSGFLYTFVG 50
TSG+++TF G
Sbjct: 736 STSGYIFTFAG 746
Score = 45.1 bits (105), Expect(3) = 2e-27
Identities = 27/53 (50%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPFIQGKDLGNVIA------SSVPYSSTIGSLMYAMVCTRPDI 268
+AK VS PLAN F K V S +PYSS +GS+MY MVCTRP+I
Sbjct: 621 DAKSVSTPLANHFKLTKKSCPVSEKEKDEMSVIPYSSAMGSVMYLMVCTRPNI 673
Score = 32.7 bits (73), Expect(3) = 2e-27
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G A+ WQS+LQKCVALS
Sbjct: 744 FAGGAISWQSKLQKCVALS 762
>gb|OMO51796.1| Reverse transcriptase, RNA-dependent DNA polymerase [Corchorus
capsularis]
Length = 1500
Score = 103 bits (257), Expect(2) = 3e-27
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+S PGK HWEAVKW YL+G K+CL +E IL G+TDAD++GDL SRK
Sbjct: 1225 AVGVMSRFLSNPGKVHWEAVKWIFRYLRGTSKMCLSFETSQTILEGFTDADMAGDLDSRK 1284
Query: 82 FTSGFLYTFVGKLFNGSQDCRSVL 11
TSG+++TF G + S CRSVL
Sbjct: 1285 STSGYIFTFAGGAVSCSLSCRSVL 1308
Score = 45.8 bits (107), Expect(2) = 3e-27
Identities = 28/54 (51%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPFIQGKDLGNVIASS------VPYSSTIGSLMYAMVCTRPDIA 265
+AK VS PLAN F K V + YSS +GSLMY MVCTRPDIA
Sbjct: 1170 DAKSVSTPLANHFKLTKKSCPVSEKKKDEMAVILYSSVVGSLMYLMVCTRPDIA 1223
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 89.0 bits (219), Expect(3) = 8e-27
Identities = 38/71 (53%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+S PG+EHW+AVKW L YL+G + LC+ IL GYTD+D++GD+ +RK
Sbjct: 1130 AVGVVSRFLSNPGREHWDAVKWILRYLRGTSSLSLCFGTGKPILTGYTDSDMAGDIDTRK 1189
Query: 82 FTSGFLYTFVG 50
TSG+L T+ G
Sbjct: 1190 STSGYLITYAG 1200
Score = 48.5 bits (114), Expect(3) = 8e-27
Identities = 28/53 (52%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = -1
Query: 405 AKPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
AKPVS PL F + VPYSS +GSLMYAMVCTRPDIA
Sbjct: 1076 AKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIA 1128
Score = 30.8 bits (68), Expect(3) = 8e-27
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
+ G AV WQSRLQKCV LS
Sbjct: 1198 YAGGAVSWQSRLQKCVDLS 1216
>gb|KZV32632.1| putative LRR receptor-like serine/threonine-protein kinase
[Dorcoceras hygrometricum]
Length = 213
Score = 107 bits (268), Expect = 2e-26
Identities = 48/71 (67%), Positives = 56/71 (78%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+S PGKEHWEAVKW L YLKG K+CLCY + IL GYTDAD++GD+ SRK
Sbjct: 14 AVGMVSRFLSNPGKEHWEAVKWILRYLKGTTKLCLCYGEANPILEGYTDADMAGDIDSRK 73
Query: 82 FTSGFLYTFVG 50
TSGF+YTF G
Sbjct: 74 STSGFIYTFAG 84
>gb|KYP60297.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 183
Score = 80.9 bits (198), Expect(3) = 2e-26
Identities = 36/71 (50%), Positives = 49/71 (69%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
A+GT+S F+S PG+EHW AVKW + YL G + LC+ LVGY+D+D++GD+ SRK
Sbjct: 58 AIGTVSRFLSNPGREHWNAVKWIMRYLHGTVDMKLCFGGDKPTLVGYSDSDMAGDVDSRK 117
Query: 82 FTSGFLYTFVG 50
T G+L F G
Sbjct: 118 STLGYLIKFAG 128
Score = 52.8 bits (125), Expect(3) = 2e-26
Identities = 29/54 (53%), Positives = 33/54 (61%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAK VS PLA F + + VPY+ST+GSLMYAMVCTRPDIA
Sbjct: 3 NAKAVSTPLATHFKLSVKQSPSNEAEKLEMERVPYASTVGSLMYAMVCTRPDIA 56
Score = 33.5 bits (75), Expect(3) = 2e-26
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -2
Query: 65 LHFRGEAV*WQSRLQKCVALS 3
+ F G AV WQSRLQ+CVALS
Sbjct: 124 IKFAGGAVAWQSRLQRCVALS 144
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 86.3 bits (212), Expect(3) = 2e-26
Identities = 39/71 (54%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S F+S PG+ HWEAVKW + YL+G K+ L + ILVGYTD+D++GD+ +RK
Sbjct: 1103 AVGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRK 1162
Query: 82 FTSGFLYTFVG 50
TSG+L TF G
Sbjct: 1163 STSGYLMTFSG 1173
Score = 46.2 bits (108), Expect(3) = 2e-26
Identities = 28/52 (53%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -1
Query: 402 KPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
K VS PLA+ F D VPY+S IGSLMYAMVCTRPDIA
Sbjct: 1050 KVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIA 1101
Score = 34.3 bits (77), Expect(3) = 2e-26
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQSRLQKCVALS
Sbjct: 1171 FSGGAVSWQSRLQKCVALS 1189
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 85.1 bits (209), Expect(3) = 2e-26
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
A+G +S F+S PG+ HWEAVKW + YL+G K+ L + ILVGYTD+D++GD+ +R+
Sbjct: 984 AIGVVSRFLSNPGRHHWEAVKWIMRYLRGTSKLKLTFGSGKPILVGYTDSDMAGDVDNRR 1043
Query: 82 FTSGFLYTFVG 50
TSG+L TF G
Sbjct: 1044 XTSGYLMTFSG 1054
Score = 47.4 bits (111), Expect(3) = 2e-26
Identities = 28/53 (52%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Frame = -1
Query: 405 AKPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
AK VS PLA+ F D VPY+S +GSLMYAMVCTRPDIA
Sbjct: 930 AKVVSSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIA 982
Score = 34.3 bits (77), Expect(3) = 2e-26
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F G AV WQSRLQKCVALS
Sbjct: 1052 FSGGAVSWQSRLQKCVALS 1070
>gb|KYP54199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 256
Score = 84.0 bits (206), Expect(3) = 3e-26
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVGT++ F+S PG+EHW AVKW L YL G + LC+ LVGY+D+D++GD+ SRK
Sbjct: 58 AVGTVNRFLSNPGREHWNAVKWILRYLHGTVDMKLCFRGDKPTLVGYSDSDMAGDVDSRK 117
Query: 82 FTSGFLYTFVG 50
TSG+L F G
Sbjct: 118 STSGYLIKFAG 128
Score = 47.8 bits (112), Expect(3) = 3e-26
Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAK VS PLA F + + VPY+S +GSLMY MVCTRPDIA
Sbjct: 3 NAKAVSTPLATHFKLSVKQSPSNEDEKLDMERVPYASAVGSLMYEMVCTRPDIA 56
Score = 34.7 bits (78), Expect(3) = 3e-26
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2
Query: 65 LHFRGEAV*WQSRLQKCVALS 3
+ F G AV WQSRLQKCVALS
Sbjct: 124 IKFAGGAVAWQSRLQKCVALS 144
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 82.0 bits (201), Expect(3) = 4e-26
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = -3
Query: 262 AVGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRK 83
AVG +S +++ P K HWEAVKW L YL+G + LC+ + IL G+TDAD++GDL +RK
Sbjct: 492 AVGLVSRYLANPSKVHWEAVKWILRYLRGTSNLSLCFGGGEPILEGFTDADMAGDLDNRK 551
Query: 82 FTSGFLYTF 56
TSG+L+ F
Sbjct: 552 STSGYLFKF 560
Score = 54.3 bits (129), Expect(3) = 4e-26
Identities = 30/54 (55%), Positives = 34/54 (62%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPFIQGK------DLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAKPV+ PLA F K + S +PYSS +GSLMYAMVCTRPDIA
Sbjct: 437 NAKPVNTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIA 490
Score = 29.6 bits (65), Expect(3) = 4e-26
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2
Query: 59 FRGEAV*WQSRLQKCVALS 3
F A+ WQS+LQKCVALS
Sbjct: 560 FARGAISWQSKLQKCVALS 578
>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
Length = 1556
Score = 82.8 bits (203), Expect(3) = 5e-26
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = -3
Query: 259 VGTLSHFISIPGKEHWEAVKWFLGYLKGRPKICLCYERVDQILVGYTDADISGDLGSRKF 80
VGT+S F+S PG+EHW AVKW L YL+G + LC+ LVGYTD+D+ GD+ SR+
Sbjct: 1077 VGTVSRFMSNPGREHWNAVKWILRYLRGTTCLRLCFGGDKPTLVGYTDSDMGGDIDSRRS 1136
Query: 79 TSGFLYTFVG 50
TSG++ F G
Sbjct: 1137 TSGYVIKFAG 1146
Score = 48.1 bits (113), Expect(3) = 5e-26
Identities = 27/54 (50%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Frame = -1
Query: 408 NAKPVSIPLANPF------IQGKDLGNVIASSVPYSSTIGSLMYAMVCTRPDIA 265
NAK VS PLA F + +PY+S +GSLMYAMVCTRPDIA
Sbjct: 1021 NAKVVSTPLATHFKLSTKQSPSYEYEKSDMQRIPYASAVGSLMYAMVCTRPDIA 1074
Score = 34.7 bits (78), Expect(3) = 5e-26
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -2
Query: 65 LHFRGEAV*WQSRLQKCVALS 3
+ F G AV WQSRLQKCVALS
Sbjct: 1142 IKFAGGAVAWQSRLQKCVALS 1162