BLASTX nr result
ID: Rehmannia29_contig00038551
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00038551
(2373 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1330 0.0
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1300 0.0
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 1298 0.0
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1292 0.0
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 1291 0.0
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus] 1290 0.0
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1290 0.0
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 1290 0.0
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1290 0.0
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1289 0.0
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1289 0.0
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1288 0.0
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1286 0.0
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1286 0.0
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1286 0.0
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1284 0.0
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1284 0.0
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1282 0.0
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1281 0.0
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|... 1270 0.0
>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 1330 bits (3442), Expect = 0.0
Identities = 656/711 (92%), Positives = 673/711 (94%), Gaps = 8/711 (1%)
Frame = +3
Query: 210 SHSRSRRLREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDD 365
S + LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCSKSP+V+FDD
Sbjct: 674 SQALQSMLRQNPDLPMEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVVFDD 733
Query: 366 YGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYI 545
YGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIF++LSRYYI
Sbjct: 734 YGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTKLSRYYI 793
Query: 546 NATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYA 725
NATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYA
Sbjct: 794 NATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLIKKAAFTDAGHKVSTYA 853
Query: 726 GCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLK 905
GCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLK
Sbjct: 854 GCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLK 913
Query: 906 TFLSLVREDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAH 1085
TFLSLVREDKI EF+ VEDK TTLDDFKE L+DKF+REIFTEAH
Sbjct: 914 TFLSLVREDKIEEFAAPKDAPKPIAPPVTHFPVEDKSTTLDDFKEGLNDKFDREIFTEAH 973
Query: 1086 GHTNCVQGDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWAN 1265
GHTNCVQG+DPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILW N
Sbjct: 974 GHTNCVQGNDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWTN 1033
Query: 1266 YHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKS 1445
YHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKS
Sbjct: 1034 YHKAMKLPKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKS 1093
Query: 1446 QWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQD 1625
QWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQD
Sbjct: 1094 QWVKKMEKLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQD 1153
Query: 1626 LSRWVLNYWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPK 1805
LSRWVL++WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPK
Sbjct: 1154 LSRWVLSHWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPK 1213
Query: 1806 IFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSF 1985
IFLGTLSIMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQVCPEKPSF
Sbjct: 1214 IFLGTLSIMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQVCPEKPSF 1273
Query: 1986 ALLKNRIALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKD 2165
ALLKNRIALQAKPAY+PQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKD
Sbjct: 1274 ALLKNRIALQAKPAYSPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKD 1333
Query: 2166 AISNVIANYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
AISNV+ANYSLDA+LAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 AISNVVANYSLDARLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 1384
Score = 161 bits (408), Expect = 5e-37
Identities = 79/85 (92%), Positives = 80/85 (94%)
Frame = +1
Query: 4 EPGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTD 183
EP LSK+LTTLRSLNR PT WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQ MLTD
Sbjct: 595 EPSLSKILTTLRSLNRSPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQAMLTD 654
Query: 184 NVTANLAISVIHGAGGSGKSQALQS 258
NVT NLAISVIHGAGGSGKSQALQS
Sbjct: 655 NVTTNLAISVIHGAGGSGKSQALQS 679
>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 1300 bits (3364), Expect = 0.0
Identities = 638/704 (90%), Positives = 659/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWL+KLPHNPPEQFRTFERAFVCS+SP+VIFDDYGKLPQG
Sbjct: 681 LRQDPTLPIEVVLPTNELRLDWLRKLPHNPPEQFRTFERAFVCSRSPVVIFDDYGKLPQG 740
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL PAT +F++LSRYYINATHRNS
Sbjct: 741 YLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLTPATAVFAQLSRYYINATHRNS 800
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSN CPLKVTYGFQPQPGLHLLVPSL+KKAAFTDAGHKVSTYAGCQGITA
Sbjct: 801 KFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITA 860
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 861 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 920
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EFS VE + TTLDDFKE L DKF+REIF EAHGHTNCVQ
Sbjct: 921 EDKIMEFSASDDSPAPVAPPTTHFPVEGRSTTLDDFKEELDDKFDREIFNEAHGHTNCVQ 980
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DD T QLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILW NYHKAM L
Sbjct: 981 TDDTTIQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWVNYHKAMGL 1040
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
PKEQP+FSEDLW RCAEEVQNTYLKKSINQIKGGERRQSPDFH H+ILIFLKSQWVKKME
Sbjct: 1041 PKEQPDFSEDLWVRCAEEVQNTYLKKSINQIKGGERRQSPDFHTHEILIFLKSQWVKKME 1100
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQD+SRWV+N
Sbjct: 1101 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDISRWVMN 1160
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS
Sbjct: 1161 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1220
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF LLKNR+
Sbjct: 1221 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFTLLKNRL 1280
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1281 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1340
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL
Sbjct: 1341 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 1384
Score = 142 bits (359), Expect = 5e-31
Identities = 69/85 (81%), Positives = 75/85 (88%)
Frame = +1
Query: 4 EPGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTD 183
+P L K+LTTLRSLNRFPT W PDRARARAFTSDVKNSRTGKALHRE+ WKETQT+LTD
Sbjct: 595 DPELQKILTTLRSLNRFPTPWTPDRARARAFTSDVKNSRTGKALHRESLVWKETQTLLTD 654
Query: 184 NVTANLAISVIHGAGGSGKSQALQS 258
+LAISVIHGAGGSGKSQALQ+
Sbjct: 655 TADVDLAISVIHGAGGSGKSQALQT 679
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 1298 bits (3359), Expect = 0.0
Identities = 638/704 (90%), Positives = 660/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFV S+ P+VIFDDYGKLPQG
Sbjct: 662 LRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSRGPVVIFDDYGKLPQG 721
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
YIEAFAMTHA+LEL+ILTGDPRQSTHHEANEEALISKL+PATT FSELSRYYINATHRNS
Sbjct: 722 YIEAFAMTHANLELIILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINATHRNS 781
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLG+YSSN CPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 782 KFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 841
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 842 PRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 901
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EFS VE+ T LDDF+E L DKF+REIFTEAHGHTNCVQ
Sbjct: 902 EDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREELHDKFDREIFTEAHGHTNCVQ 961
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETIKARLTISTPEAN+EEFRAKKDLGDILW NYHKAM L
Sbjct: 962 TDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANIEEFRAKKDLGDILWTNYHKAMNL 1021
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
PKEQP+FSE+LWTRCAEEVQNTYLKKS+NQ+KGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1022 PKEQPDFSEELWTRCAEEVQNTYLKKSLNQLKGGERRQSPDFHEHQILIFLKSQWVKKME 1081
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVL+
Sbjct: 1082 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLS 1141
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKP+YANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS
Sbjct: 1142 YWDFSKPAYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1201
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF IPEGTAQIYAGDDCAIAQVCPEKPSFALLK+RI
Sbjct: 1202 IMRLTGEGPTFDANTECNIAYTHTRFNIPEGTAQIYAGDDCAIAQVCPEKPSFALLKDRI 1261
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1262 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1321
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGD+L DLLSPRQAHLHQVTVRDLVKFGGSPFL
Sbjct: 1322 NYSLDAKLAYSLGDELHDLLSPRQAHLHQVTVRDLVKFGGSPFL 1365
Score = 142 bits (359), Expect = 5e-31
Identities = 68/86 (79%), Positives = 75/86 (87%)
Frame = +1
Query: 1 NEPGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLT 180
+ P K++ TLR+LNRFPT W PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTMLT
Sbjct: 575 DSPQFEKIIATLRNLNRFPTPWSPDRARARAFTSDVKNSRTGKALHRESQTWKETQTMLT 634
Query: 181 DNVTANLAISVIHGAGGSGKSQALQS 258
DN + AISVIHGAGGSGKSQALQ+
Sbjct: 635 DNAEIHTAISVIHGAGGSGKSQALQT 660
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1292 bits (3343), Expect = 0.0
Identities = 637/704 (90%), Positives = 654/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFA+THASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFALTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSN CPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF HGHTNCVQ
Sbjct: 914 EDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDDFKEELHDKFDREIFNPTHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLTIS PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS+ QIKGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWIRCAEEVQNTYLKKSVAQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFR+ALSPNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFREALSPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 136 bits (342), Expect = 6e-29
Identities = 63/84 (75%), Positives = 74/84 (88%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRS NR+PT W PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTML +N
Sbjct: 589 PDMERIISTLRSFNRYPTPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTMLAEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 1291 bits (3342), Expect = 0.0
Identities = 634/704 (90%), Positives = 658/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDK+AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 914 EDKVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 140 bits (352), Expect = 4e-30
Identities = 65/85 (76%), Positives = 77/85 (90%)
Frame = +1
Query: 4 EPGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTD 183
+P + ++++TLRSLNR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT+
Sbjct: 588 DPDMEQIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTE 647
Query: 184 NVTANLAISVIHGAGGSGKSQALQS 258
+ NLAISVIHGAGGSGKSQALQ+
Sbjct: 648 STQTNLAISVIHGAGGSGKSQALQT 672
>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 1290 bits (3339), Expect = 0.0
Identities = 633/704 (89%), Positives = 658/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 914 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 139 bits (350), Expect = 6e-30
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRSLNR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT++
Sbjct: 589 PDMEQIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTES 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 TQTNLAISVIHGAGGSGKSQALQT 672
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1290 bits (3339), Expect = 0.0
Identities = 633/704 (89%), Positives = 658/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 914 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 139 bits (350), Expect = 6e-30
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRSLNR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT++
Sbjct: 589 PDMEQIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTES 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 TQTNLAISVIHGAGGSGKSQALQT 672
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 1290 bits (3339), Expect = 0.0
Identities = 633/704 (89%), Positives = 658/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 5 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 64
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 65 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 124
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGHKVSTYAGCQGITA
Sbjct: 125 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITA 184
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 185 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 244
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 245 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 304
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 305 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 364
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 365 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 424
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 425 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 484
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 485 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 544
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 545 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 604
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 605 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 664
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 665 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 708
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1290 bits (3337), Expect = 0.0
Identities = 636/704 (90%), Positives = 654/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF AHGHTNCVQ
Sbjct: 914 EDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+
Sbjct: 1154 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
Score = 141 bits (356), Expect = 1e-30
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++L+TLRSLNR+PT W PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLT+N
Sbjct: 589 PDMERILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1289 bits (3335), Expect = 0.0
Identities = 632/704 (89%), Positives = 657/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGHK STYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKASTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 914 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 139 bits (350), Expect = 6e-30
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRSLNR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT++
Sbjct: 589 PDMEQIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTES 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 TQTNLAISVIHGAGGSGKSQALQT 672
>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1289 bits (3335), Expect = 0.0
Identities = 632/704 (89%), Positives = 657/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL+KKAAFTDAGHK STYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKASTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 914 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 138 bits (347), Expect = 1e-29
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRSLNR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT++
Sbjct: 589 PDMEQIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTES 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
N+AISVIHGAGGSGKSQALQ+
Sbjct: 649 TQTNVAISVIHGAGGSGKSQALQT 672
>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1288 bits (3332), Expect = 0.0
Identities = 631/704 (89%), Positives = 658/704 (93%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSL+KKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLD+DTTMCTKEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDSDTTMCTKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHG+TNCVQ
Sbjct: 914 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGYTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1377
Score = 138 bits (347), Expect = 1e-29
Identities = 63/84 (75%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRS+NR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT++
Sbjct: 589 PDMEQIISTLRSINRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTES 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLA+SVIHGAGGSGKSQALQ+
Sbjct: 649 TQTNLAVSVIHGAGGSGKSQALQT 672
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1286 bits (3328), Expect = 0.0
Identities = 635/704 (90%), Positives = 653/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF AHGHTNCVQ
Sbjct: 914 EDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+
Sbjct: 1154 CWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
Score = 140 bits (352), Expect = 4e-30
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++L+TLR LNR+PT W PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLT+N
Sbjct: 589 PDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1286 bits (3328), Expect = 0.0
Identities = 635/704 (90%), Positives = 653/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF AHGHTNCVQ
Sbjct: 914 EDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+
Sbjct: 1154 CWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
Score = 140 bits (352), Expect = 4e-30
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++L+TLR LNR+PT W PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLT+N
Sbjct: 589 PDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1286 bits (3328), Expect = 0.0
Identities = 635/704 (90%), Positives = 653/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF AHGHTNCVQ
Sbjct: 914 EDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+
Sbjct: 1154 CWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
Score = 140 bits (352), Expect = 4e-30
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++L+TLR LNR+PT W PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLT+N
Sbjct: 589 PDMERILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1284 bits (3323), Expect = 0.0
Identities = 633/704 (89%), Positives = 652/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
K LANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF AHGHTNCVQ
Sbjct: 914 EDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEH ILIFLKSQWVKKME
Sbjct: 1034 PSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHHILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCE+TPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCERTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+
Sbjct: 1154 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
Score = 141 bits (356), Expect = 1e-30
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++L+TLRSLNR+PT W PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLT+N
Sbjct: 589 PDMERILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1284 bits (3322), Expect = 0.0
Identities = 630/704 (89%), Positives = 654/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYG QPQPGLHLLVPSL KKAAFTDAGHK STYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLXKKAAFTDAGHKASTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMC KEVLYTALSRAVDSIHF+NSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCXKEVLYTALSRAVDSIHFINSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
ED++AEFS VED TTLDDF+E L DKF+REIF +AHGHTNCVQ
Sbjct: 914 EDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREELQDKFDREIFNQAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
D+PTTQLF+HQQAKDEALLWETI ARLTIS+PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDNPTTQLFAHQQAKDEALLWETINARLTISSPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLWTRCAEEVQNTYLKKS+ QIKGG+RRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PNEQPDFSEDLWTRCAEEVQNTYLKKSVAQIKGGDRRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
+WDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTL+
Sbjct: 1154 HWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEG AQIYAGDDCAI+QVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGAAQIYAGDDCAISQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+A
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVA 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP Q HLHQVTVRDLVKFGGSPFL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQXHLHQVTVRDLVKFGGSPFL 1377
Score = 139 bits (350), Expect = 6e-30
Identities = 65/84 (77%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P + ++++TLRSLNR+PT W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT++
Sbjct: 589 PDMEQIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTES 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 TQTNLAISVIHGAGGSGKSQALQT 672
>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 1282 bits (3317), Expect = 0.0
Identities = 629/704 (89%), Positives = 653/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDWLKKLPHNPPEQFRTFERAFV S SP+VIFDDYGKLPQG
Sbjct: 681 LRQNPSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYGKLPQG 740
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFA+THA+LEL ILTGDPRQSTHHE+NEEALISKL PATTI+S LSRYYINATHRNS
Sbjct: 741 YLEAFALTHANLELAILTGDPRQSTHHESNEEALISKLPPATTIYSTLSRYYINATHRNS 800
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
K+LANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLVKKAAFTD GHKVSTYAGCQGITA
Sbjct: 801 KYLANKLGVYSANSCPLNVTYGFQPLPGMHLLVPSLVKKAAFTDVGHKVSTYAGCQGITA 860
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 861 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 920
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF VE+ TTLDDFKE L DKF+REIFT GHTNCVQ
Sbjct: 921 EDKITEFQAPEDAPKPVTPPVTHFPVEEPATTLDDFKEELHDKFDREIFTSDRGHTNCVQ 980
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPT QLFSHQQAKDEALLWETIKARLTISTPEAN++EFRAKKDLGDILWANYH+AM L
Sbjct: 981 TDDPTIQLFSHQQAKDEALLWETIKARLTISTPEANIDEFRAKKDLGDILWANYHRAMGL 1040
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
PKEQP+FSEDLWTRCAEEVQNTYLKKS+ Q+KGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1041 PKEQPDFSEDLWTRCAEEVQNTYLKKSLAQLKGGERRQSPDFHEHQILIFLKSQWVKKME 1100
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1101 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALGPNNIMINCEKTPQDLSRWVLN 1160
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTLS
Sbjct: 1161 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLS 1220
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGPTFDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI
Sbjct: 1221 IMRLTGEGPTFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 1280
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQ+KAGVKDAI+NV+A
Sbjct: 1281 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQRKAGVKDAIANVVA 1340
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1341 NYSLDAKLAYSLGDDLQDLLSPHQAHLHQVTVRDLVKFGGSPFL 1384
Score = 142 bits (359), Expect = 5e-31
Identities = 69/82 (84%), Positives = 74/82 (90%)
Frame = +1
Query: 13 LSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDNVT 192
L +LTTLRSLNRFPT W PDR RARAFTSDVKNSRTGKALHRE+Q WKETQTMLT+N
Sbjct: 598 LESILTTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQAWKETQTMLTENTQ 657
Query: 193 ANLAISVIHGAGGSGKSQALQS 258
A+LAISVIHGAGGSGKSQALQ+
Sbjct: 658 ADLAISVIHGAGGSGKSQALQT 679
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1281 bits (3315), Expect = 0.0
Identities = 632/704 (89%), Positives = 651/704 (92%), Gaps = 8/704 (1%)
Frame = +3
Query: 231 LREKPGAP--------ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQG 386
LR+ P P ELRLDW KKLPHNPPEQFRTFERAFVCS+ P+VIFDDYGKLPQG
Sbjct: 674 LRQYPNLPIEVVLPTNELRLDWPKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYGKLPQG 733
Query: 387 YIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNS 566
Y+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINATHRNS
Sbjct: 734 YLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINATHRNS 793
Query: 567 KFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 746
KFLANKLGVYSSNSCPLKVTYGFQP+PGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA
Sbjct: 794 KFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITA 853
Query: 747 PKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 926
P+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR
Sbjct: 854 PRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVR 913
Query: 927 EDKIAEFSXXXXXXXXXXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQ 1106
EDKI EF+ VED TTLDDFKE L DKF+REIF AHGHTNCVQ
Sbjct: 914 EDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEELRDKFDREIFNPAHGHTNCVQ 973
Query: 1107 GDDPTTQLFSHQQAKDEALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKL 1286
DDPTTQLFSHQQAKDEALLWETI ARLT+S PEANL EFRAKKDLGDILW NY KAMKL
Sbjct: 974 TDDPTTQLFSHQQAKDEALLWETINARLTLSNPEANLAEFRAKKDLGDILWENYRKAMKL 1033
Query: 1287 PKEQPEFSEDLWTRCAEEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1466
P EQP+FSEDLW RCAEEVQNTYLKKS++QIKGGERRQSPDFHEHQILIFLKSQWVKKME
Sbjct: 1034 PSEQPDFSEDLWIRCAEEVQNTYLKKSVSQIKGGERRQSPDFHEHQILIFLKSQWVKKME 1093
Query: 1467 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLN 1646
KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDAL PNNIMINCEKTPQDLSRWVLN
Sbjct: 1094 KLGAKKIKPGQTIASFQQHAVMLYGTMARYMRRFRDALRPNNIMINCEKTPQDLSRWVLN 1153
Query: 1647 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLS 1826
YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIF+GTL+
Sbjct: 1154 YWDFSKPSYANDFTAFDQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFMGTLT 1213
Query: 1827 IMRLTGEGPTFDANTECNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRI 2006
IMRLTGEGP FDANTECNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSF+LLKNRI
Sbjct: 1214 IMRLTGEGPAFDANTECNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFSLLKNRI 1273
Query: 2007 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIA 2186
ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAI+NV+
Sbjct: 1274 ALQAKPAYTPQERGQWAEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAITNVVD 1333
Query: 2187 NYSLDAKLAYSLGDDLQDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
NYSLDAKLAYSLGDDLQDLLSP QA LHQVTVRDLVKFGGS FL
Sbjct: 1334 NYSLDAKLAYSLGDDLQDLLSPHQARLHQVTVRDLVKFGGSSFL 1377
Score = 140 bits (352), Expect = 4e-30
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +1
Query: 7 PGLSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDN 186
P ++++L+TLRSLNR+PT W PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ MLT+N
Sbjct: 589 PDMARILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAMLTEN 648
Query: 187 VTANLAISVIHGAGGSGKSQALQS 258
NLAISVIHGAGGSGKSQALQ+
Sbjct: 649 SQTNLAISVIHGAGGSGKSQALQT 672
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase
emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
Length = 1385
Score = 1270 bits (3286), Expect = 0.0
Identities = 622/688 (90%), Positives = 646/688 (93%)
Frame = +3
Query: 255 ELRLDWLKKLPHNPPEQFRTFERAFVCSKSPIVIFDDYGKLPQGYIEAFAMTHASLELVI 434
ELRLDWLKKLPHNPPEQFRTFERAFV S SP+VIFDDYGKLPQGY+EAFA+THA+LELVI
Sbjct: 695 ELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYGKLPQGYLEAFALTHANLELVI 754
Query: 435 LTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCP 614
LTGDPRQSTHHE+NEEALISKL PATTI+S SRYYINAT RNSKFLANKLGVYS+NSCP
Sbjct: 755 LTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINATLRNSKFLANKLGVYSANSCP 814
Query: 615 LKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGCQGITAPKVQILLDNDTTMCTK 794
L VTYGFQP PGLHLLVPSL+KKAAFTDAGHKVS+YAGCQGITAPKVQILLDNDTTMCTK
Sbjct: 815 LNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTK 874
Query: 795 EVLYTALSRAVDSIHFVNSNAQSSAFWEKLEATPYLKTFLSLVREDKIAEFSXXXXXXXX 974
EVLYTALSRAVDSIHFVN+NAQSSAFWEKLEATPYLKTFLSLVREDKI EF
Sbjct: 875 EVLYTALSRAVDSIHFVNTNAQSSAFWEKLEATPYLKTFLSLVREDKITEFQAPADAPKP 934
Query: 975 XXXXXXXXXVEDKMTTLDDFKESLSDKFEREIFTEAHGHTNCVQGDDPTTQLFSHQQAKD 1154
VE+ TTLDDFKE L DKF+REIFT GHTNCVQ DDPTTQLFSHQQAKD
Sbjct: 935 VTPPVTHFPVEEPATTLDDFKEELRDKFDREIFTSDRGHTNCVQTDDPTTQLFSHQQAKD 994
Query: 1155 EALLWETIKARLTISTPEANLEEFRAKKDLGDILWANYHKAMKLPKEQPEFSEDLWTRCA 1334
EALLWE I+ARL ISTPEAN+EEFRAKKDLGDILW NYH+AM LPKEQP+FSEDLW RCA
Sbjct: 995 EALLWEMIRARLKISTPEANIEEFRAKKDLGDILWVNYHRAMGLPKEQPDFSEDLWNRCA 1054
Query: 1335 EEVQNTYLKKSINQIKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKKIKPGQTIASF 1514
EEVQNTYLKK++ Q+KGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAK+IKPGQTIASF
Sbjct: 1055 EEVQNTYLKKTMAQLKGGERRQSPDFHEHQILIFLKSQWVKKMEKLGAKEIKPGQTIASF 1114
Query: 1515 QQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAF 1694
QQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAF
Sbjct: 1115 QQHAVMLYGTMARYMRRFRDALSPNNIMINCEKTPQDLSRWVLNYWDFSKPSYANDFTAF 1174
Query: 1695 DQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTE 1874
DQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTE
Sbjct: 1175 DQSQDGAMLQFEILKAKYFNLPEWVIEGYLDIKLSPKIFLGTLSIMRLTGEGPTFDANTE 1234
Query: 1875 CNIAYTHTRFEIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQW 2054
CNIAYTHTRF+IPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQW
Sbjct: 1235 CNIAYTHTRFDIPEGTAQIYAGDDCAIAQVCPEKPSFALLKNRIALQAKPAYTPQERGQW 1294
Query: 2055 AEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVKDAISNVIANYSLDAKLAYSLGDDL 2234
AEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGV+DAI+NV+ANYSLDAKLAYSLGDDL
Sbjct: 1295 AEFCGYLITPKGLIKDPLKLHASLELAKAQKKAGVRDAITNVVANYSLDAKLAYSLGDDL 1354
Query: 2235 QDLLSPRQAHLHQVTVRDLVKFGGSPFL 2318
QDLLSP QAHLHQVTVRDLVKFGGSPFL
Sbjct: 1355 QDLLSPHQAHLHQVTVRDLVKFGGSPFL 1382
Score = 142 bits (357), Expect = 9e-31
Identities = 68/82 (82%), Positives = 74/82 (90%)
Frame = +1
Query: 13 LSKVLTTLRSLNRFPTSWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTDNVT 192
L ++L+TLRSLNRFPT W PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTMLT+N
Sbjct: 596 LERILSTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTMLTENTQ 655
Query: 193 ANLAISVIHGAGGSGKSQALQS 258
LAISVIHGAGGSGKSQALQ+
Sbjct: 656 TELAISVIHGAGGSGKSQALQT 677