BLASTX nr result

ID: Rehmannia29_contig00038533 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00038533
         (517 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_013595190.1| PREDICTED: uncharacterized protein LOC106303...    56   5e-06

>ref|XP_013595190.1| PREDICTED: uncharacterized protein LOC106303478 [Brassica oleracea
           var. oleracea]
          Length = 514

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 51/187 (27%), Positives = 81/187 (43%), Gaps = 15/187 (8%)
 Frame = -1

Query: 517 YILWWLWKTRNLWVFHKTHWHERDIVNHAVI---EWQEFQNISGTSRLDVRTLSN----- 362
           +ILW LW  RN  +F    ++E ++V  A++   EWQ     +G+     +  S+     
Sbjct: 307 WILWLLWTNRNKLLFEDKSFNESELVTRALVLAREWQSTSLPAGSQSDSPKDSSHKPFVL 366

Query: 361 PSSVEH------HAMVISAGNWLDQISIFGDWIC-EGSGRVIKAWASSRELIQHPVEATL 203
           PS  E       H  V +A N       FG WIC + +G  ++   SSR  +   + A  
Sbjct: 367 PSGFEEASSDTIHYYVDAAWNSGSAAGGFG-WICYDHAGLTLRQGTSSRRYVASALVAEA 425

Query: 202 TCIKFAMCTAAKAKIQRLCILVDDKDIACNLNNQSNFEDDGAQIARDIYLLCFLFDHVTF 23
             +K A+  A  A ++ L    D K +   L+ +S+   +  +I  DI LL      VTF
Sbjct: 426 LALKSALSDAVNAGVKDLICFSDSKSLVALLSGKSSV-TELQRIISDISLLSLSLWSVTF 484

Query: 22  EVQSSVC 2
           +     C
Sbjct: 485 KFVPRSC 491


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