BLASTX nr result
ID: Rehmannia29_contig00038489
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00038489
(2476 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1508 0.0
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1384 0.0
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1379 0.0
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 1378 0.0
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1371 0.0
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1370 0.0
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1370 0.0
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1368 0.0
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1368 0.0
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1368 0.0
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1367 0.0
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus] 1367 0.0
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1365 0.0
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1365 0.0
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1364 0.0
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1362 0.0
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ... 1362 0.0
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 1359 0.0
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m... 1324 0.0
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|... 1286 0.0
>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 1508 bits (3905), Expect = 0.0
Identities = 735/825 (89%), Positives = 771/825 (93%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPK+NPVSFLFMKP+KLR+FHRGPTHGD FLNAHVEPKDVPRYPQ+TV+S
Sbjct: 76 SDLYEVVSHYLPKDNPVSFLFMKPSKLRYFHRGPTHGDLFLNAHVEPKDVPRYPQETVLS 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYS+DGFMYIPGGHAGASYFHKYDQLEWLTVGHLTA NQPTITAQRLETKGANHLFIFQ
Sbjct: 196 LTYSDDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTANNQPTITAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNL+QRLLRPLRSDIQ
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLLQRLLRPLRSDIQ 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++LQFFRGRPSFV+LIKALDWQP+TLEFPVR+VNT+LRGPPGF NPFTKPHPVNPDD DT
Sbjct: 376 KILQFFRGRPSFVRLIKALDWQPVTLEFPVRSVNTKLRGPPGFRNPFTKPHPVNPDDDDT 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
MR+FREF +ADSLEGSAEN HTSLKVGH+DLSTEQLRALHELGN+RLG
Sbjct: 436 MRSFREFTHTLDNSSPATVADSLEGSAENPTIHTSLKVGHSDLSTEQLRALHELGNSRLG 495
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLPKIT T S + Q +H D+APVNS+P+TLPWV+WLPKL
Sbjct: 496 GPLLPKITLNEQSREPCPDLPPEPRPTTTSTTQAQENHPDQAPVNSEPSTLPWVSWLPKL 555
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQ DPSTG+ IMPI DVR L KATLPEHW EP LSK+LTTLR LNR PTPW
Sbjct: 556 NALGFEALEIQIDPSTGDTIMPITDVRSLQKATLPEHWIEPSLSKILTTLRSLNRSPTPW 615
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
CPDRARARAFTSDVKNSRTGKALHRETQTWKETQ MLT+NVT NLAISVIHGAGGSGKSQ
Sbjct: 616 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQAMLTDNVTTNLAISVIHGAGGSGKSQ 675
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQ++LRQNP+LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVV+FDDYG
Sbjct: 676 ALQSMLRQNPDLPMEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVVFDDYG 735
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIF++LSRYYINA
Sbjct: 736 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFTKLSRYYINA 795
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 796 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLIKKAAFTDAGHKVSTYAGC 855
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 856 QGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900
>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 1384 bits (3581), Expect = 0.0
Identities = 672/825 (81%), Positives = 724/825 (87%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPV+FLFMKPAKLR+FHRGPTH D FLN HVEPKDVPRYPQ+T++S
Sbjct: 76 SDLYEVVSHYLPKENPVAFLFMKPAKLRYFHRGPTHRDLFLNDHVEPKDVPRYPQETILS 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHL+A QPT+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLSAQGQPTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNY+TP +RTFTT + YVTVPDIFLPE+YNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYMTPPKRTFTTADQYVTVPDIFLPERYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNL+QRLLRP+R+D+Q
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLLQRLLRPIRADMQ 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
R++QFF+G+PSFVKLIKALDWQPITLEFPVR+V T +RGPPGF +PFTKPHPVN DD T
Sbjct: 376 RIVQFFKGQPSFVKLIKALDWQPITLEFPVRSVKTHVRGPPGFQSPFTKPHPVNTDDGQT 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+ F++F +A +LE + E A HT LK+ L+ QL ALH LGNTR G
Sbjct: 436 SKDFQDFTLRGAGTTHHTVAAALEATTECEAGHTCLKIATEHLTEPQLLALHNLGNTRCG 495
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLP T + + E P N +P LPWVAWLPKL
Sbjct: 496 GPLLPPATTSAQVEEPCPDLPPAPRAAEGQTQTPPQEEQGEQPRNVEPNELPWVAWLPKL 555
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEA EIQTDPSTG +IMPI D DLP+ATLP HW +P L K+LTTLR LNRFPTPW
Sbjct: 556 NALGFEAREIQTDPSTGAMIMPITDTLDLPRATLPAHWEDPELQKILTTLRSLNRFPTPW 615
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARARAFTSDVKNSRTGKALHRE+ WKETQT+LT+ +LAISVIHGAGGSGKSQ
Sbjct: 616 TPDRARARAFTSDVKNSRTGKALHRESLVWKETQTLLTDTADVDLAISVIHGAGGSGKSQ 675
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ+P LPIEVVLPTNELRLDWL+KLPHNPPEQFRTFERAFVCS+SPVVIFDDYG
Sbjct: 676 ALQTLLRQDPTLPIEVVLPTNELRLDWLRKLPHNPPEQFRTFERAFVCSRSPVVIFDDYG 735
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL PAT +F++LSRYYINA
Sbjct: 736 KLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLTPATAVFAQLSRYYINA 795
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSLMKKAAFTDAGHKVSTYAGC
Sbjct: 796 THRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAGC 855
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 856 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900
>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 1379 bits (3569), Expect = 0.0
Identities = 678/825 (82%), Positives = 720/825 (87%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHVEPKDVPRYPQ+T+I+
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHVEPKDVPRYPQETIIN 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RL +IPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLADIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHLTAP QPTITAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLTAPGQPTITAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTP RRTF T++HYVTVP IFLPE YNCRTPISKT MMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPARRTFATSDHYVTVPQIFLPEDYNCRTPISKTTMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCF+DVLSGNL+QRLLRPLR+D Q
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFQDVLSGNLLQRLLRPLRADFQ 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
RVLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DADT
Sbjct: 376 RVLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADT 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
R F++F + +LE +AE+ HT LKV L +QL A+H LG+ R G
Sbjct: 436 SRGFQDFTRATTPKLQPTVEATLEATAESSDHHTQLKVLCDTLPEKQLEAIHALGHLRCG 495
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLP T + AS + + D P P TLPWVAWLPKL
Sbjct: 496 GPLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTTQAPETLPWVAWLPKL 555
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALE+Q DPSTGE+IMPI D RDLP+ATLP HW L +LTTLR LNRFPTPW
Sbjct: 556 NALGFEALEVQHDPSTGEMIMPITDTRDLPRATLPPHWQGHDLESILTTLRSLNRFPTPW 615
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDR RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTEN A+LAISVIHGAGGSGKSQ
Sbjct: 616 SPDRTRARAFTSDVKNSRTGKALHRESQAWKETQTMLTENTQADLAISVIHGAGGSGKSQ 675
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQNP LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S SPVVIFDDYG
Sbjct: 676 ALQTLLRQNPSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYG 735
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFA+THA+LEL ILTGDPRQSTHHE+NEEALISKL PATTI+S LSRYYINA
Sbjct: 736 KLPQGYLEAFALTHANLELAILTGDPRQSTHHESNEEALISKLPPATTIYSTLSRYYINA 795
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSK+LANKLGVYS+NSCPL VTYGFQP PGMHLLVPSL+KKAAFTD GHKVSTYAGC
Sbjct: 796 THRNSKYLANKLGVYSANSCPLNVTYGFQPLPGMHLLVPSLVKKAAFTDVGHKVSTYAGC 855
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 856 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 1378 bits (3567), Expect = 0.0
Identities = 681/825 (82%), Positives = 724/825 (87%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR+FHRGPTHGDFFLNAHVEPKDVPRYPQDTV++
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRYFHRGPTHGDFFLNAHVEPKDVPRYPQDTVLN 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENI T+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENISTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKYDQLEWLT+GHL APNQPT+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTIGHLQAPNQPTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTT+ YVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTDPYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEF ASLDSHTCFEDVLSGNL+QRLLRPLR+D+Q
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFAASLDSHTCFEDVLSGNLLQRLLRPLRADMQ 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
R+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +PFT+P PVNPDDA+T
Sbjct: 376 RILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+FREF + + LE S E+ +HTSLKV LS EQL ALHELGN+R G
Sbjct: 436 TESFREFIQPLNPSPTATVTEMLENSTESDVTHTSLKVVPQSLSPEQLSALHELGNSRCG 495
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GP+LPK T S+ L + H P P + K
Sbjct: 496 GPMLPK---------------RSSNHTHTSSDLLRRRH----PRQQRSTNPPMGSLAAKA 536
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
+GFEALEIQTDPSTG+ IMPI D R+LP+A +P HW+ P K++ TLR LNRFPTPW
Sbjct: 537 KRIGFEALEIQTDPSTGQPIMPITDTRELPRAIMPAHWDSPQFEKIIATLRNLNRFPTPW 596
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTMLT+N + AISVIHGAGGSGKSQ
Sbjct: 597 SPDRARARAFTSDVKNSRTGKALHRESQTWKETQTMLTDNAEIHTAISVIHGAGGSGKSQ 656
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQNP+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S+ PVVIFDDYG
Sbjct: 657 ALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSRGPVVIFDDYG 716
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGYIEAFAMTHA+LEL+ILTGDPRQSTHHEANEEALISKL+PATT FSELSRYYINA
Sbjct: 717 KLPQGYIEAFAMTHANLELIILTGDPRQSTHHEANEEALISKLSPATTTFSELSRYYINA 776
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLG+YSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 777 THRNSKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 836
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQSS
Sbjct: 837 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQSS 881
>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1371 bits (3548), Expect = 0.0
Identities = 679/825 (82%), Positives = 719/825 (87%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS +
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F + +L +E H SL + + L QL ALHELGN R G
Sbjct: 436 TQSFQAFCQATAT-----VEXTLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLPK ++ + + P DP+TLPWVAWLPKL
Sbjct: 491 GPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHPQDPSTLPWVAWLPKL 548
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P + ++L+TLRGLNR+PTPW
Sbjct: 549 NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPW 608
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN NLAISVIHGAGGSGKSQ
Sbjct: 609 NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669 ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINA
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 849 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1370 bits (3547), Expect = 0.0
Identities = 679/825 (82%), Positives = 719/825 (87%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS +
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F + +L +E H SL + + L QL ALHELGN R G
Sbjct: 436 TQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLPK ++ + + P DP+TLPWVAWLPKL
Sbjct: 491 GPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHPQDPSTLPWVAWLPKL 548
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P + ++L+TLRGLNR+PTPW
Sbjct: 549 NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPW 608
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN NLAISVIHGAGGSGKSQ
Sbjct: 609 NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669 ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINA
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 849 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1370 bits (3547), Expect = 0.0
Identities = 676/826 (81%), Positives = 722/826 (87%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PF +P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+F+ F + LE SAE H SL++ LS QL ALHELGNTR G
Sbjct: 436 THSFQAF-----CQATAAVGTILEQSAETPDEHQSLRLNCPTLSEHQLWALHELGNTRCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q + P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPDLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW P + ++++TLR +NR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSINRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ NLA+SVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAVSVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLD+DTTMCTKEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDSDTTMCTKEVLYTALSRAVDSIHFINSNAQSS 893
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1368 bits (3542), Expect = 0.0
Identities = 678/826 (82%), Positives = 719/826 (87%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+F+ F + LE AE H SL++ LS QL ALHELGN R G
Sbjct: 436 THSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW P + ++++TLR LNR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ NLAISVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSS 893
>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1368 bits (3541), Expect = 0.0
Identities = 678/825 (82%), Positives = 718/825 (87%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS +
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F + +L +E H SL + + L QL ALHELGN R G
Sbjct: 436 TQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
PLLPK ++ + + P DP+TLPWVAWLPKL
Sbjct: 491 APLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHPQDPSTLPWVAWLPKL 548
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P + ++L+TLRGLNR+PTPW
Sbjct: 549 NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRGLNRYPTPW 608
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN NLAISVIHGAGGSGKSQ
Sbjct: 609 NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669 ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINA
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 849 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1368 bits (3540), Expect = 0.0
Identities = 676/826 (81%), Positives = 718/826 (86%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP PT+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLPTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSSAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+F+ F + LE AE H SL++ LS QL ALH LGN R G
Sbjct: 436 THSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHALGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTSTAVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW P + ++++TLR LNR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ N+AISVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNVAISVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHK STYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKASTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSS 893
>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1367 bits (3539), Expect = 0.0
Identities = 678/825 (82%), Positives = 717/825 (86%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS +
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F + +L +E H SL + L QL ALHELGN R G
Sbjct: 436 TQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLPK ++ + + P DP+TLPWVAWLPKL
Sbjct: 491 GPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHPQDPSTLPWVAWLPKL 548
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P + ++L+TLR LNR+PTPW
Sbjct: 549 NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPW 608
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN NLAISVIHGAGGSGKSQ
Sbjct: 609 NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669 ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINA
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 849 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 1367 bits (3537), Expect = 0.0
Identities = 677/826 (81%), Positives = 719/826 (87%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTSIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+F+ F + LE AE H SL++ LS QL ALHELGN R G
Sbjct: 436 THSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW P + ++++TLR LNR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ NLAISVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSS 893
>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1365 bits (3533), Expect = 0.0
Identities = 677/825 (82%), Positives = 716/825 (86%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS +
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F + +L +E H SL + L QL ALHELGN R G
Sbjct: 436 TQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLPK ++ + + P DP+TLPWVAWLPKL
Sbjct: 491 GPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHPQDPSTLPWVAWLPKL 548
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P + ++L+TLR LNR+PTPW
Sbjct: 549 NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMERILSTLRSLNRYPTPW 608
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN NLAISVIHGAGGSGKSQ
Sbjct: 609 NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNLAISVIHGAGGSGKSQ 668
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669 ALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINA
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSK LANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789 THRNSKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 849 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1365 bits (3533), Expect = 0.0
Identities = 676/826 (81%), Positives = 718/826 (86%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+F+ F + LE AE H SL++ LS QL ALHELGN R G
Sbjct: 436 THSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW P + ++++TLR LNR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ NLAISVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHK STYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKASTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSS 893
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1364 bits (3530), Expect = 0.0
Identities = 679/830 (81%), Positives = 717/830 (86%), Gaps = 5/830 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPD+FLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDVFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL+S I
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLKSGIT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F +LE AE H SL + L QL ALHELGNTR G
Sbjct: 436 TQSFQAFCQATITAEA-----ALEQQAETPDEHQSLSLKCPTLPEHQLWALHELGNTRCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLN-----QGDHTDEAPVNSDPATLPWVA 1425
GPLLPK A S N + T + P DP TLPWVA
Sbjct: 491 GPLLPK-------GPAKLTTVEPCPDLPAENSANPEPPRKTTQTLDLPHPEDPTTLPWVA 543
Query: 1426 WLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNR 1605
WLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P + ++++TLR NR
Sbjct: 544 WLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRAEGHAHWQGPDMERIISTLRSFNR 603
Query: 1606 FPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGG 1785
+PTPW PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTML EN NLAISVIHGAGG
Sbjct: 604 YPTPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTMLAENSQTNLAISVIHGAGG 663
Query: 1786 SGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVI 1965
SGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVI
Sbjct: 664 SGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVI 723
Query: 1966 FDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSR 2145
FDDYGKLPQGY+EAFA+THASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSR
Sbjct: 724 FDDYGKLPQGYLEAFALTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSR 783
Query: 2146 YYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVS 2325
YYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSL+KKAAFTDAGHKVS
Sbjct: 784 YYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLVKKAAFTDAGHKVS 843
Query: 2326 TYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
TYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 844 TYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1362 bits (3526), Expect = 0.0
Identities = 675/826 (81%), Positives = 716/826 (86%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +PFT+P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
+F+ F + LE AE H SL++ LS QL ALHELGN R G
Sbjct: 436 THSFQAF-----CQAAAAVETILEQQAETPDEHXSLRLDCPTLSEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW P + ++++TLR LNR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDMEQIISTLRSLNRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ NLAISVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSL KKAAFTDAGHK STYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLXKKAAFTDAGHKASTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLDNDTTMC KEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDNDTTMCXKEVLYTALSRAVDSIHFINSNAQSS 893
>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 1362 bits (3524), Expect = 0.0
Identities = 675/825 (81%), Positives = 716/825 (86%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQDT+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQDTIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT
Sbjct: 136 RLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSGNL+QR+LRPLRS +
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSGNLLQRMLRPLRSGLT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +PF +P PVNPDDA+T
Sbjct: 376 QLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDSPFARPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
++F+ F + +L +E H SL + L QL ALHELGN R G
Sbjct: 436 TQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPEHQLWALHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLPK ++ + + P DP+TLPWVAWLPKL
Sbjct: 491 GPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHPQDPSTLPWVAWLPKL 548
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALEIQTDPSTGE+IMPI D R+LP+A HW P ++++L+TLR LNR+PTPW
Sbjct: 549 NALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMARILSTLRSLNRYPTPW 608
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ MLTEN NLAISVIHGAGGSGKSQ
Sbjct: 609 NPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAMLTENSQTNLAISVIHGAGGSGKSQ 668
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ P LPIEVVLPTNELRLDW KKLPHNPPEQFRTFERAFVCS+ PVVIFDDYG
Sbjct: 669 ALQTLLRQYPNLPIEVVLPTNELRLDWPKKLPHNPPEQFRTFERAFVCSRCPVVIFDDYG 728
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL PAT IFSELSRYYINA
Sbjct: 729 KLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPPATAIFSELSRYYINA 788
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
THRNSKFLANKLGVYSSNSCPLKVTYGFQP+PG+HLLVPSL+KKAAFTDAGHKVSTYAGC
Sbjct: 789 THRNSKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKAAFTDAGHKVSTYAGC 848
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 849 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 1359 bits (3518), Expect = 0.0
Identities = 673/826 (81%), Positives = 716/826 (86%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHVEPKDVPRYPQ+T+I
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHVEPKDVPRYPQETIIK 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSL+PQIYT
Sbjct: 136 RLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLHPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP T+TAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSE TLLVNYFE TASLDSHTCFED+LSGNL+QR+LRPL S
Sbjct: 316 AKFRQLISTKELQHYQPSETTLLVNYFELTASLDSHTCFEDILSGNLLQRILRPLTSGAT 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +PFT+P PVNPDDA+T
Sbjct: 376 QILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDSPFTRPQPVNPDDAET 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
F+ F + LE AE H SL++ LS QL +LHELGN R G
Sbjct: 436 THIFQAF-----CQAAAAVETILEQQAETPEEHQSLRLDCPTLSEHQLWSLHELGNARCG 490
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPVNSDPATLPWVAWLPK 1437
GPLLP+ T A+ +Q P DP TLPWVAWLPK
Sbjct: 491 GPLLPQ---RPDTATVVEPCPDLPPETHAAPEPSQRNTQAPNLPSPQDPTTLPWVAWLPK 547
Query: 1438 LNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTP 1617
LNALGFEALEIQ DPSTG +IMPI D ++LP+A P HW +P + ++++TLR LNR+PTP
Sbjct: 548 LNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQDPDMEQIISTLRSLNRYPTP 607
Query: 1618 WCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKS 1797
W PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+ NLAISVIHGAGGSGKS
Sbjct: 608 WNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTNLAISVIHGAGGSGKS 667
Query: 1798 QALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDY 1977
QALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+ PVVIFDDY
Sbjct: 668 QALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSRCPVVIFDDY 727
Query: 1978 GKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYIN 2157
GKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL PATTIFSELSRYYIN
Sbjct: 728 GKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLPPATTIFSELSRYYIN 787
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 788 ATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKKAAFTDAGHKVSTYAG 847
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQSS
Sbjct: 848 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQSS 893
>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1388
Score = 1324 bits (3426), Expect = 0.0
Identities = 651/826 (78%), Positives = 698/826 (84%), Gaps = 1/826 (0%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTH D FLNAHVEPKDVPRYPQ+T+++
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHSDHFLNAHVEPKDVPRYPQETIVN 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RLENIPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPPEALYR RSLYPQIYT
Sbjct: 136 RLENIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPPEALYRPRSLYPQIYT 195
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVG LT+P QPTITAQRLETKGANHLFIFQ
Sbjct: 196 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGRLTSPGQPTITAQRLETKGANHLFIFQ 255
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNYLTPERRTF T +HYVTVP IFLPE YNCRTPISKT MMQMFFYIKSVKEAKERDIW
Sbjct: 256 RGNYLTPERRTFATNDHYVTVPHIFLPENYNCRTPISKTTMMQMFFYIKSVKEAKERDIW 315
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
AKFRQLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDVLSGNL+QRLLRPLRSD Q
Sbjct: 316 AKFRQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDVLSGNLLQRLLRPLRSDFQ 375
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T LRGPPGF +P T+P PVNP+DADT
Sbjct: 376 RILQFFRGRPSFVKLIKALDWQPITLEFPVRDVCTTLRGPPGFKSPLTRPQPVNPEDADT 435
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
R+F++F + ++L+ +AE L HT LKV LS QL A+H LG+ R G
Sbjct: 436 SRSFQDFTRTTAASPKPTVEETLDATAERLDHHTQLKVHCDTLSERQLEAIHSLGHLRCG 495
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLP++T Q D P P TLPWVAWLPKL
Sbjct: 496 GPLLPELTPRHAPAEPCPDLPPSPTKGQTETPSPSTSGPDLQPTTQAPETLPWVAWLPKL 555
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALE+Q DPSTGE+IMPI D R+LP+ATLP HW L+ +LTTLR LNRFPTPW
Sbjct: 556 NALGFEALEVQHDPSTGEMIMPITDTRELPRATLPAHWQGSNLTSILTTLRSLNRFPTPW 615
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDR RARAFTSDVKNSRTGKALHRE+QTWKETQT+L EN LA+SVIHGAGGSGKSQ
Sbjct: 616 IPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTLLAENTQVELALSVIHGAGGSGKSQ 675
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ+P LPIEV+LPTNELRLDWLKKLPHNPPEQFRTFERAFVCS+SPVVIFDDYG
Sbjct: 676 ALQTLLRQDPSLPIEVILPTNELRLDWLKKLPHNPPEQFRTFERAFVCSQSPVVIFDDYG 735
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP-ATTIFSELSRYYIN 2157
KLPQGY+EAFA+THA+LELVILTG P+ K +P SRYYIN
Sbjct: 736 KLPQGYLEAFALTHANLELVILTGGPQAVHAPRVQRGGAHLKASPRPQPSIQPFSRYYIN 795
Query: 2158 ATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAG 2337
ATHRNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKAAFTDAGHKVSTYAG
Sbjct: 796 ATHRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSTYAG 855
Query: 2338 CQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
CQGITAP+VQILLD+DTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 856 CQGITAPKVQILLDSDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 901
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase
emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
Length = 1385
Score = 1286 bits (3328), Expect = 0.0
Identities = 641/825 (77%), Positives = 693/825 (84%)
Frame = +1
Query: 1 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHVEPKDVPRYPQDTVIS 180
SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHVEPKDVPRYPQ+T+I+
Sbjct: 76 SDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHVEPKDVPRYPQETIIN 135
Query: 181 RLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPPEALYRLRSLYPQIYT 360
RL +IPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPPE RSLYPQIYT
Sbjct: 136 RLADIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPPEPSTS-RSLYPQIYT 194
Query: 361 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITAQRLETKGANHLFIFQ 540
LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAP PT+TAQRLETKGANHLFIFQ
Sbjct: 195 LTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPGCPTVTAQRLETKGANHLFIFQ 254
Query: 541 RGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMFFYIKSVKEAKERDIW 720
RGNY+TPERRTF T + YVTVP IFLPE YNCRTPISKT MMQMFFYIKS KEA+
Sbjct: 255 RGNYITPERRTFATNDQYVTVPHIFLPENYNCRTPISKTTMMQMFFYIKSGKEAQREGHL 314
Query: 721 AKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSGNLIQRLLRPLRSDIQ 900
+ +QLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDV L + I
Sbjct: 315 GQVQQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDV-PPKLAPKTTPAPPLGIS 373
Query: 901 RVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHNPFTKPHPVNPDDADT 1080
R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF NPFT+P PVNP+DAD
Sbjct: 374 RILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKNPFTQPQPVNPEDADI 433
Query: 1081 MRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLSTEQLRALHELGNTRLG 1260
F++F + LE SAE+ HT LKV + LS QL A+H LG++R G
Sbjct: 434 SSRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQLKVLCSALSEGQLEAIHALGHSRCG 493
Query: 1261 GPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVNSDPATLPWVAWLPKL 1440
GPLLP++T +QAS + + D P +P TLPWVAWLPKL
Sbjct: 494 GPLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTAQNPETLPWVAWLPKL 553
Query: 1441 NALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSKVLTTLRGLNRFPTPW 1620
NALGFEALE+Q DPSTGE+IMPI D ++LP+ATLP HW L ++L+TLR LNRFPTPW
Sbjct: 554 NALGFEALEVQHDPSTGEMIMPITDTQELPRATLPAHWQGHNLERILSTLRSLNRFPTPW 613
Query: 1621 CPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANLAISVIHGAGGSGKSQ 1800
PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTMLTEN LAISVIHGAGGSGKSQ
Sbjct: 614 SPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTMLTENTQTELAISVIHGAGGSGKSQ 673
Query: 1801 ALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVCSKSPVVIFDDYG 1980
ALQTLLRQ+ LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFV S SPVVIFDDYG
Sbjct: 674 ALQTLLRQDHSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERAFVSSHSPVVIFDDYG 733
Query: 1981 KLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAPATTIFSELSRYYINA 2160
KLPQGY+EAFA+THA+LELVILTGDPRQSTHHE+NEEALISKL PATTI+S SRYYINA
Sbjct: 734 KLPQGYLEAFALTHANLELVILTGDPRQSTHHESNEEALISKLPPATTIYSAFSRYYINA 793
Query: 2161 THRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKAAFTDAGHKVSTYAGC 2340
T RNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKAAFTDAGHKVS+YAGC
Sbjct: 794 TLRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKAAFTDAGHKVSSYAGC 853
Query: 2341 QGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2475
QGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+NAQSS
Sbjct: 854 QGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQSS 898