BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00038147
         (584 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]            98   4e-20
dbj|GAU35627.1| hypothetical protein TSUD_30450 [Trifolium subte...    96   1e-19
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]            94   9e-19
gb|PNX71533.1| ribonuclease H [Trifolium pratense]                     93   2e-18
dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subte...    93   2e-18
gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indi...    88   6e-18
gb|PNX72264.1| ribonuclease H [Trifolium pratense]                     90   3e-17
gb|OMO84064.1| reverse transcriptase [Corchorus capsularis]            90   3e-17
dbj|GAU44059.1| hypothetical protein TSUD_399580 [Trifolium subt...    90   3e-17
dbj|GAU21787.1| hypothetical protein TSUD_329120, partial [Trifo...    89   6e-17
ref|XP_017221408.1| PREDICTED: uncharacterized protein LOC108198...    88   8e-17
ref|XP_021751079.1| uncharacterized protein LOC110716751 [Chenop...    88   8e-17
ref|XP_023634342.1| uncharacterized protein LOC17879006 [Capsell...    88   9e-17
ref|XP_008240710.1| PREDICTED: uncharacterized protein LOC103339...    87   1e-16
emb|CDP09717.1| unnamed protein product [Coffea canephora]             87   1e-16
gb|PNX96793.1| ribonuclease H, partial [Trifolium pratense]            87   2e-16
gb|OMO95972.1| reverse transcriptase [Corchorus olitorius]             87   2e-16
gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]            87   2e-16
ref|XP_023905045.1| uncharacterized protein LOC112016795 [Quercu...    87   2e-16
gb|OMO91045.1| Endonuclease/exonuclease/phosphatase [Corchorus c...    87   2e-16

>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1068

 Score = 97.8 bits (242), Expect = 4e-20
 Identities = 43/109 (39%), Positives = 68/109 (62%)
 Frame = -2

Query: 331  RMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKN 152
            R+ +D+ +W+WE+ G YSV++AY  L +  +   D PE S+    N+  W   WK Q   
Sbjct: 964  RLPDDKKVWSWERNGNYSVRSAYHLLKE--ETLRDIPEPSTAG--NTGIWKSIWKVQAPQ 1019

Query: 151  KLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
            ++K+FLW+V+   +PT   L ++G+ +DP+CP+C D  ET EHLF  C+
Sbjct: 1020 RVKNFLWRVVKRILPTRCRLEQKGVALDPICPLCHDGEETQEHLFMHCQ 1068


>dbj|GAU35627.1| hypothetical protein TSUD_30450 [Trifolium subterraneum]
          Length = 1475

 Score = 96.3 bits (238), Expect = 1e-19
 Identities = 42/110 (38%), Positives = 66/110 (60%)
 Frame = -2

Query: 334  MRMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVK 155
            +R+ +D  +WNWEK G YSV++AY  +   ++     P  S      +  W + WK  V 
Sbjct: 1104 LRLPSDTLVWNWEKDGAYSVRSAYHLICDEKERSLPGPSVS----RKNKVWKEIWKAPVP 1159

Query: 154  NKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
            NK+K+F+W++  N +PT   L+K+G+ +D  CP+C  EVE+  HLF QC+
Sbjct: 1160 NKIKNFMWRLTKNILPTRANLHKKGISLDLQCPLCHHEVESTNHLFLQCD 1209


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score = 94.0 bits (232), Expect = 9e-19
 Identities = 43/108 (39%), Positives = 68/108 (62%)
 Frame = -2

Query: 331 RMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKN 152
           R+  D+ IW+WEK G++SV++AY  L +I+   ++ PE+SS   H    W   WK +V N
Sbjct: 593 RLPADKLIWHWEKNGEFSVRSAYHMLSEIRN--QNSPEASSSRDH--LLWKAIWKVKVPN 648

Query: 151 KLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
            +K+FLW++    +PT   L K+G+ +D  CP+C +++E  EHLF  C
Sbjct: 649 CIKNFLWRLAKAILPTRSRLEKKGITLDTTCPLCFNDIECNEHLFMHC 696


>gb|PNX71533.1| ribonuclease H [Trifolium pratense]
          Length = 798

 Score = 93.2 bits (230), Expect = 2e-18
 Identities = 41/109 (37%), Positives = 66/109 (60%)
 Frame = -2

Query: 331 RMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKN 152
           R+ +D  IWNWEK G+YSV++AY  L   +   +  P         S  W + W+  V N
Sbjct: 427 RLPHDLLIWNWEKDGEYSVRSAYHLLCDEKARFQPGPSCPQ----RSKLWKEIWRAPVPN 482

Query: 151 KLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
           K+K+F+W++  N +PT   L+K+G+ +D +CP+C  E E+ +HLF +C+
Sbjct: 483 KIKNFMWRLAKNILPTRSNLHKKGITLDLLCPLCSSEEESSQHLFLKCD 531


>dbj|GAU39028.1| hypothetical protein TSUD_59840 [Trifolium subterraneum]
          Length = 1626

 Score = 92.8 bits (229), Expect = 2e-18
 Identities = 43/108 (39%), Positives = 67/108 (62%)
 Frame = -2

Query: 331  RMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKN 152
            R+  D+ IW+WEK G++SV++AY  L + +   ++ PE+SS    +   W   WK  V N
Sbjct: 1266 RLPADKLIWHWEKNGEFSVRSAYHMLSEDRN--KNSPEASSS--RDQLLWKTIWKVNVPN 1321

Query: 151  KLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
             +K+FLW+V    +PT   L K+G+ +D  CP+C +++E  EHLF QC
Sbjct: 1322 CIKNFLWRVAKAILPTRGRLEKKGITLDTTCPLCFNDIECNEHLFMQC 1369


>gb|EEC79285.1| hypothetical protein OsI_20087 [Oryza sativa Indica Group]
 gb|EEC79286.1| hypothetical protein OsI_20088 [Oryza sativa Indica Group]
          Length = 216

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
 Frame = -2

Query: 325 LNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNS----TNWGKCWKFQV 158
           L D   W+++ KG +SVK+AYK  +QI++ KE   ++S  +++ S      W K W  +V
Sbjct: 58  LEDWPTWHFDSKGLFSVKSAYKLAVQIRE-KEKCRDASGSSLNTSHADTLQWEKIWNMEV 116

Query: 157 KNKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
            NK+K F+W++ +N +P    + +RGME D +CPMC    E   HLF +C+
Sbjct: 117 PNKIKMFVWRLAHNSLPVRCNIRRRGMESDNLCPMCNRFDEDCGHLFLKCK 167


>gb|PNX72264.1| ribonuclease H [Trifolium pratense]
          Length = 854

 Score = 89.7 bits (221), Expect = 3e-17
 Identities = 41/109 (37%), Positives = 63/109 (57%)
 Frame = -2

Query: 331 RMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKN 152
           R+  D  IWNWEK G+YSV++AY  L   +   +  P         S  W + W+  V N
Sbjct: 484 RLPQDTLIWNWEKDGEYSVRSAYHLLCDEKARLQPGPSCP----RRSKLWKEIWRAPVPN 539

Query: 151 KLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
           K+K+FLW++  N +PT   L+ +G+ +D  CP+C  E E+ +HLF +C+
Sbjct: 540 KVKNFLWRLAKNILPTRTNLHNKGITLDLQCPLCFREEESSQHLFLKCD 588


>gb|OMO84064.1| reverse transcriptase [Corchorus capsularis]
          Length = 951

 Score = 89.7 bits (221), Expect = 3e-17
 Identities = 40/104 (38%), Positives = 61/104 (58%)
 Frame = -2

Query: 319 DRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKLKH 140
           DR++W ++K+G++SV+ AY  L+  +    +W  S        T W   WK +V  KL  
Sbjct: 648 DRFVWKFDKRGKFSVRAAY-DLISKENHGGEWDYSKE------TEWKTLWKLKVPYKLVI 700

Query: 139 FLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
           FLWK+ NNC+P    L +RG  ID  C +C + +ET++HLF+ C
Sbjct: 701 FLWKICNNCLPVRAELKRRGFNIDDRCNLCHEGMETIDHLFWHC 744


>dbj|GAU44059.1| hypothetical protein TSUD_399580 [Trifolium subterraneum]
          Length = 1229

 Score = 89.7 bits (221), Expect = 3e-17
 Identities = 43/115 (37%), Positives = 61/115 (53%)
 Frame = -2

Query: 352  CRLKFLMRMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKC 173
            CR+    R L+D  IW     G Y+VK+AYK  LQ+         +S D+ + S +W K 
Sbjct: 865  CRIPLHSRALHDSIIWKSSPNGNYTVKSAYKLCLQL---------TSHDSFNVSGDWRKI 915

Query: 172  WKFQVKNKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
            W  Q+  KLKHF W+++  C+PT   L+ RG+     C +C +  E   HLFF C
Sbjct: 916  WTMQIPPKLKHFCWRMLRYCLPTRLKLHIRGVNCQTTCAVCSNATEDELHLFFDC 970


>dbj|GAU21787.1| hypothetical protein TSUD_329120, partial [Trifolium subterraneum]
          Length = 734

 Score = 88.6 bits (218), Expect = 6e-17
 Identities = 41/114 (35%), Positives = 64/114 (56%)
 Frame = -2

Query: 346 LKFLMRMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWK 167
           L    R+  D  IWNWEK G YSV++AY  L   +   +  P         S  W + W+
Sbjct: 251 LPISFRLPQDTLIWNWEKDGVYSVRSAYHLLCDEKARLQPGPSCPK----RSKLWKEIWR 306

Query: 166 FQVKNKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
             V NK+K+F+W++  N +PT   L+ +G+++D  CP+C  E E+ +HLF +C+
Sbjct: 307 APVPNKVKNFIWRLAKNILPTRTNLHNKGIKLDLQCPLCFREEESSQHLFLKCD 360


>ref|XP_017221408.1| PREDICTED: uncharacterized protein LOC108198150 [Daucus carota
           subsp. sativus]
          Length = 632

 Score = 88.2 bits (217), Expect = 8e-17
 Identities = 44/110 (40%), Positives = 59/110 (53%)
 Frame = -2

Query: 337 LMRMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQV 158
           L R + D W W  EK GQYSV++AY  L +    K D   SS     NS  W + W  ++
Sbjct: 387 LQRSMEDSWYWRREKMGQYSVRSAYAALSE----KRDVNHSSD----NSGFWRRIWNLKI 438

Query: 157 KNKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
             K+KHFLW+ I  C+PT   L  R +E+   CP+C  E E+V H+   C
Sbjct: 439 PLKVKHFLWRAITGCLPTKEQLISRRVEVIEQCPLCNLEPESVAHVLTSC 488


>ref|XP_021751079.1| uncharacterized protein LOC110716751 [Chenopodium quinoa]
          Length = 637

 Score = 88.2 bits (217), Expect = 8e-17
 Identities = 41/116 (35%), Positives = 65/116 (56%)
 Frame = -2

Query: 352 CRLKFLMRMLNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKC 173
           C +   M    D W+W++ K G YSV++AY  LL ++Q K D   +S+    +  +W   
Sbjct: 312 CNIPIPMFDRKDSWVWHYTKDGNYSVRSAYN-LLTVEQ-KNDTASNSTTV--SKVDWSMV 367

Query: 172 WKFQVKNKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
           W  ++  K+K F W+ + N +   + L KR M ID  CPMCG++VE+  H+  +CE
Sbjct: 368 WDAELPPKVKFFSWRAMKNAVAARYSLAKRAMPIDTTCPMCGNDVESALHMLIKCE 423


>ref|XP_023634342.1| uncharacterized protein LOC17879006 [Capsella rubella]
          Length = 1758

 Score = 88.2 bits (217), Expect = 9e-17
 Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
 Frame = -2

Query: 319  DRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWG------KCWKFQV 158
            DR IW++ K G+YSV++ Y  ++          E  +   ++S   G      + WK +V
Sbjct: 1389 DRLIWHYNKSGEYSVRSGYWLIMH---------EPHTMIANHSVPSGSLVLKNQIWKLKV 1439

Query: 157  KNKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
              K+KHFLW+++   +PT   LN RGM +DP+CP C    ET+EH+FFQC
Sbjct: 1440 IPKIKHFLWRILTKALPTITRLNSRGMNLDPICPRCFRADETIEHIFFQC 1489


>ref|XP_008240710.1| PREDICTED: uncharacterized protein LOC103339206 [Prunus mume]
          Length = 467

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 49/149 (32%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
 Frame = -2

Query: 451 SVPTKLPD*MAVAKHGTRTS*INSCVWRMLLIFCRLKFLMRMLN-DRWIWNWEKKGQYSV 275
           S P ++ + M    H  R   I+S V R  +   R   +      DR +W W   G Y+V
Sbjct: 83  SAPQQVCEIMDKVNHSWRVDLIDSYVSRETIDIIRCCPIGNSDGCDRRVWPWTSNGDYTV 142

Query: 274 KTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKLKHFLWKVINNCIPTTWL 95
           K+ Y+++   ++ +E    S+S  +     W   WK     K++ FLW+++N+ I T W 
Sbjct: 143 KSGYRRIHAQKRIREGEGGSTSHVVQKEV-WQSIWKIVTLPKIRVFLWRLLNDAISTRWN 201

Query: 94  LNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
           L KR +   P+CP+CG   ETVEHL F C
Sbjct: 202 LFKRKIVNSPLCPICGQLEETVEHLLFLC 230


>emb|CDP09717.1| unnamed protein product [Coffea canephora]
          Length = 613

 Score = 87.4 bits (215), Expect = 1e-16
 Identities = 41/105 (39%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = -2

Query: 307 WNWEKKGQYSVKTAYKQLLQI---QQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKLKHF 137
           W     G Y+V + YK L Q     + + D    +S A  N   W   WK +VK+K+KHF
Sbjct: 257 WLHSGSGTYTVNSGYKALCQETSQHKGRRDNEAGTSSANSNEKQWKWLWKLKVKSKIKHF 316

Query: 136 LWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCER 2
           +W+ +N  +P   L+ KR  + DP+C  CG++ E++EHLFFQC R
Sbjct: 317 IWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEHLFFQCSR 361


>gb|PNX96793.1| ribonuclease H, partial [Trifolium pratense]
          Length = 463

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
 Frame = -2

Query: 319 DRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTN-----WGKCWKFQVK 155
           D   W+  K G YSVK+ Y  ++       DW  +S+     S+N     W   WKF+V 
Sbjct: 98  DTLTWDDTKDGIYSVKSGYHAII-------DWDSNSNTNNAASSNRPMEIWKTLWKFKVP 150

Query: 154 NKLKHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQCE 5
            K  H LW+++NN IP    L K+G++ DP+CP C + VE+++H+F +CE
Sbjct: 151 PKYSHLLWRILNNAIPVKGNLFKKGVKCDPLCPRCLNHVESIQHVFLECE 200


>gb|OMO95972.1| reverse transcriptase [Corchorus olitorius]
          Length = 464

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 42/104 (40%), Positives = 60/104 (57%)
 Frame = -2

Query: 319 DRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKLKH 140
           DR  W++ + G YSVK+ YK LL  +  +E+    SS+ +     W K WK  V  KL++
Sbjct: 129 DRITWHFTRDGNYSVKSGYK-LLASETIQEEDNAQSSNGMQYCRTWRKIWKLNVATKLQN 187

Query: 139 FLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
           FLW+   N IPT   L KR    DP+C  C ++VE++EH+ F C
Sbjct: 188 FLWRACRNIIPTKENLVKRHCSYDPVCVRCNEDVESLEHILFFC 231


>gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1348

 Score = 87.4 bits (215), Expect = 2e-16
 Identities = 40/104 (38%), Positives = 63/104 (60%)
 Frame = -2

Query: 319  DRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKLKH 140
            D+ +W  EK G YSVK+AY  L    + +   PESSS A    + W   W   + N++K+
Sbjct: 1090 DKLVWTGEKNGGYSVKSAYHLLCNESEVRH--PESSSSAA--GSFWKHLWAIPLPNRIKN 1145

Query: 139  FLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
            F+W++  N +PT   L +R + +DP+CP+C +++E+ EHLF  C
Sbjct: 1146 FMWRLAKNILPTRGNLLRRRVPLDPVCPLCFNDLESTEHLFLHC 1189


>ref|XP_023905045.1| uncharacterized protein LOC112016795 [Quercus suber]
          Length = 1373

 Score = 87.4 bits (215), Expect = 2e-16
 Identities = 44/104 (42%), Positives = 57/104 (54%)
 Frame = -2

Query: 319  DRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKLKH 140
            DR IW +  KG ++V +AYK  L + Q K    E +SDA  +S  W K W  ++ NKLK 
Sbjct: 1008 DRMIWAYTPKGTFTVNSAYKVALSLSQSKAK--EETSDASSHSQFWQKIWSLRIPNKLKT 1065

Query: 139  FLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
            F W+   N +PT   L  RG+  DP C  CG   ET  HLF+ C
Sbjct: 1066 FAWRASRNILPTKANLCSRGVIDDPTCDACGLNAETSGHLFWDC 1109


>gb|OMO91045.1| Endonuclease/exonuclease/phosphatase [Corchorus capsularis]
          Length = 1210

 Score = 87.0 bits (214), Expect = 2e-16
 Identities = 42/106 (39%), Positives = 63/106 (59%)
 Frame = -2

Query: 325  LNDRWIWNWEKKGQYSVKTAYKQLLQIQQWKEDWPESSSDAIHNSTNWGKCWKFQVKNKL 146
            ++DR IW++ + G YSVK+ YK LL      +D  +SSS  +  +  W K W   V  K+
Sbjct: 988  IDDRIIWHFTRDGNYSVKSGYKLLLSKTSSIDDNGQSSS-GVQQAGYWRKIWNLNVAPKI 1046

Query: 145  KHFLWKVINNCIPTTWLLNKRGMEIDPMCPMCGDEVETVEHLFFQC 8
            ++F+W+   N IPT   L KR   ++P C  CG+EVE++EH+ F C
Sbjct: 1047 QNFIWRACKNVIPTKENLFKRRCGLNPDCNRCGEEVESLEHILFFC 1092