BLASTX nr result

ID: Rehmannia29_contig00037871 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00037871
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN00079.1| hypothetical protein CDL12_27420 [Handroanthus im...    69   2e-10

>gb|PIN00079.1| hypothetical protein CDL12_27420 [Handroanthus impetiginosus]
          Length = 392

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 38/86 (44%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
 Frame = -3

Query: 340 TFLPPPISNPPATTDPGVIESPQFPIPQTPEFFPP---DMPENP-----IPFITA-XXXX 188
           TFLPPP  NPPA   PG+++ P FPIP TP+  PP   D+P+ P     IPFITA     
Sbjct: 305 TFLPPPFPNPPAADFPGIVQPPIFPIPGTPDLLPPPAIDVPDTPPTQPRIPFITAPAARE 364

Query: 187 XXXXXXXXXXXXXXXXXTAPDPDSPP 110
                             APDPDSPP
Sbjct: 365 DQPLPPPLPFFPPVDQFPAPDPDSPP 390


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