BLASTX nr result
ID: Rehmannia29_contig00037722
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00037722
(425 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposo... 65 1e-09
gb|POO00746.1| hypothetical protein TorRG33x02_033770, partial [... 62 1e-09
gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposo... 65 1e-09
gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposo... 65 2e-09
gb|PNY10806.1| histone deacetylase [Trifolium pratense] 65 2e-09
gb|PNY02744.1| retrovirus-related Pol polyprotein from transposo... 64 3e-09
ref|XP_020233470.1| uncharacterized protein LOC109813654 [Cajanu... 62 2e-08
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177... 61 4e-08
dbj|GAU44436.1| hypothetical protein TSUD_129300 [Trifolium subt... 60 8e-08
gb|PNX91972.1| retrovirus-related Pol polyprotein from transposo... 60 8e-08
gb|PNY02430.1| retrovirus-related Pol polyprotein from transposo... 60 1e-07
dbj|GAU26774.1| hypothetical protein TSUD_317720 [Trifolium subt... 60 1e-07
dbj|GAU41870.1| hypothetical protein TSUD_366180 [Trifolium subt... 60 1e-07
dbj|GAU48593.1| hypothetical protein TSUD_179750 [Trifolium subt... 60 1e-07
ref|XP_015883747.1| PREDICTED: uncharacterized protein LOC107419... 60 1e-07
ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415... 60 1e-07
gb|KYP47787.1| Retrovirus-related Pol polyprotein from transposo... 60 1e-07
gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposo... 60 1e-07
gb|PNX92571.1| histone deacetylase [Trifolium pratense] 60 1e-07
gb|PNX97517.1| retrovirus-related Pol polyprotein from transposo... 59 3e-07
>gb|KYP40443.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 488
Score = 65.5 bits (158), Expect = 1e-09
Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSLPILPTPRLS-QP 242
HKGYKCL SGRIYI++ V FNE FP++ LF T+ Q +S ++S+ ILP+ S P
Sbjct: 257 HKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFVTTTQ---ASIPATSVSILPSLVCSHNP 313
Query: 241 SSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITA------PNVPPQSQASHSMVTRS 80
SSS S TA P PP++ +H M+TRS
Sbjct: 314 SSSTLISPAITASSGSSESNFLPSSTPVNSSTTSPTASSSSHSPPAPPRN--AHPMITRS 371
Query: 79 KNGI 68
KNGI
Sbjct: 372 KNGI 375
>gb|POO00746.1| hypothetical protein TorRG33x02_033770, partial [Trema orientalis]
Length = 119
Score = 62.0 bits (149), Expect = 1e-09
Identities = 29/47 (61%), Positives = 34/47 (72%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSS 278
HKGY CLHP+GR+YI+ V FNELDFP+S+LF P SS SSS
Sbjct: 23 HKGYMCLHPTGRVYISHNVVFNELDFPYSELFQ-HKPAPSSSVGSSS 68
>gb|KYP65286.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 904
Score = 65.5 bits (158), Expect = 1e-09
Identities = 48/124 (38%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSLPILPTPRLS-QP 242
HKGYKCL SGRIYI++ V FNE FP++ LF T+ Q +S ++S+ ILP+ S P
Sbjct: 726 HKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFVTTTQ---ASIPATSVSILPSLVCSHNP 782
Query: 241 SSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITA------PNVPPQSQASHSMVTRS 80
SSS S TA P PP++ +H M+TRS
Sbjct: 783 SSSTLISPAITASSGSSESNLLPSSTPVNSSTTSPTASSSSHSPPAPPRN--AHPMITRS 840
Query: 79 KNGI 68
KNGI
Sbjct: 841 KNGI 844
>gb|KYP51497.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 872
Score = 65.1 bits (157), Expect = 2e-09
Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSLPILPTPRLS-QP 242
HKGYKCL SGRIYI++ V FNE FP++ LF T+ Q +S ++S+ ILP+ S P
Sbjct: 388 HKGYKCLSRSGRIYISKDVIFNEGRFPYNDLFITTTQ---ASIPATSVSILPSLVCSHNP 444
Query: 241 SSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITA------PNVPPQSQASHSMVTRS 80
SSS S TA P PP++ H M+TRS
Sbjct: 445 SSSTLISPAITASSGSSESNFLPSSTPVNISTTSPTASSSSNSPPAPPRN--DHPMITRS 502
Query: 79 KNGI 68
KNGI
Sbjct: 503 KNGI 506
>gb|PNY10806.1| histone deacetylase [Trifolium pratense]
Length = 1441
Score = 65.1 bits (157), Expect = 2e-09
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 3/56 (5%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLF-STSHQVPVSSFH--SSSLPILPT 260
HKGYKCL P GR+YI++ V FNEL+FP+S LF +TS P ++ H SS +P LP+
Sbjct: 774 HKGYKCLSPDGRVYISKDVVFNELEFPYSILFPNTSRSAPTNTTHSWSSVIPTLPS 829
>gb|PNY02744.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 489
Score = 64.3 bits (155), Expect = 3e-09
Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 10/129 (7%)
Frame = -2
Query: 424 TEHKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQV---PVSSFHSSSLPILPTPR 254
T HKGYKCL PSGRI+I++ V FNE FP+ LFS S++ P+ S+LPI P
Sbjct: 320 TTHKGYKCLSPSGRIFISKDVLFNESRFPYESLFSISNKALSPPIQDVPISTLPIGPQIT 379
Query: 253 LSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITAPNVPPQSQA-------SHS 95
+ P +S+ S TA N P S +H
Sbjct: 380 NTNPDNSH-------------------TSTFHSNTTTSDTAHNTTPSSPIQFSKPTNTHP 420
Query: 94 MVTRSKNGI 68
M TR+K+GI
Sbjct: 421 MQTRAKSGI 429
>ref|XP_020233470.1| uncharacterized protein LOC109813654 [Cajanus cajan]
Length = 1229
Score = 62.0 bits (149), Expect = 2e-08
Identities = 47/123 (38%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSLPILPTPRLS-QP 242
HKGYKCL SGRIYI++ V FNE FP+ LF T+ +S ++S+ ILP+ S P
Sbjct: 727 HKGYKCLSRSGRIYISKDVIFNEGRFPYHDLFVTA---TPASIPATSVSILPSLVCSHNP 783
Query: 241 SSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITA------PNVPPQSQASHSMVTRS 80
SSS S TA P+VPP + +H M+TRS
Sbjct: 784 SSSTLISPAATTNFGSSESNFLLSSTPVNSSTNSPTASSSSHSPSVPPLN--THPMITRS 841
Query: 79 KNG 71
KNG
Sbjct: 842 KNG 844
>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
Length = 1143
Score = 61.2 bits (147), Expect = 4e-08
Identities = 47/164 (28%), Positives = 64/164 (39%), Gaps = 47/164 (28%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTS------------------------- 314
HKGYKCLHPSGR YIA V F+E FP+S LF S
Sbjct: 796 HKGYKCLHPSGRTYIASHVLFDESSFPYSSLFHVSSSGNQSSDFQYNLLKHFSVPVSNSN 855
Query: 313 ------------HQVPVSSFHSSSLPILPTPRLSQPSSSNXXXXXXXXXXXXXXXXXXXX 170
H P+ H++ + ILPT L+QP+S +
Sbjct: 856 QDTLEANAAGNDHHSPLYFSHNTPVNILPTTSLTQPASDS-------------NSSIQPN 902
Query: 169 XXXXXXXPMSITAPNVPPQSQ----------ASHSMVTRSKNGI 68
+ ++ +VPPQ A+H+M+TR+K GI
Sbjct: 903 NHLPQLNQQNPSSSSVPPQQLSPPTQVQPLIATHNMITRAKAGI 946
>dbj|GAU44436.1| hypothetical protein TSUD_129300 [Trifolium subterraneum]
Length = 999
Score = 60.5 bits (145), Expect = 8e-08
Identities = 41/124 (33%), Positives = 55/124 (44%), Gaps = 5/124 (4%)
Frame = -2
Query: 424 TEHKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQV---PVSSFHSSSLPILPT-- 260
T HKGYKCL P+GR+YI++ V FNE FP+ LFS P + S+LP+ P+
Sbjct: 633 TTHKGYKCLSPNGRVYISKDVLFNESRFPYHILFSPERATTSPPTQNVPISTLPLNPSNH 692
Query: 259 PRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITAPNVPPQSQASHSMVTRS 80
P L PS S + +PP +H M TR+
Sbjct: 693 PTLITPSPPTSTKPISSD---------------------STKSIIIPPNPTNNHPMQTRA 731
Query: 79 KNGI 68
K+GI
Sbjct: 732 KSGI 735
>gb|PNX91972.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1516
Score = 60.5 bits (145), Expect = 8e-08
Identities = 44/145 (30%), Positives = 61/145 (42%), Gaps = 28/145 (19%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSH--------QVPVSSF--------- 290
HKGYKCL P+GRI++++ V FNE FP+ LFST VP+S+
Sbjct: 850 HKGYKCLSPTGRIFVSKDVLFNEHRFPYKSLFSTQDSALSDITLDVPISTLPISIQNQTI 909
Query: 289 -HSSSLPIL----------PTPRLSQPSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPM 143
++S PI P P L+QP+ SN
Sbjct: 910 TTNTSSPITQPSNTTMLSPPNPTLTQPTDSN--------TKTPHNPSSTSITTHSDSPTQ 961
Query: 142 SITAPNVPPQSQASHSMVTRSKNGI 68
S +P +P +H M TR+K+GI
Sbjct: 962 SSPSPTIPSLPTNNHRMQTRAKSGI 986
>gb|PNY02430.1| retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Trifolium pratense]
Length = 1064
Score = 60.1 bits (144), Expect = 1e-07
Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSL-PILPTPRLSQP 242
HKGY+CL P+GR++I++ V FNE FPF LF++ H V S + +L P++ P S
Sbjct: 815 HKGYRCLSPNGRLFISKDVIFNESRFPFIDLFTSPHSVVPSKSSAVTLSPLVHHPSHSPS 874
Query: 241 SSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITAPNVPP----------QSQASHSM 92
+S+ P S++ PN PP + H M
Sbjct: 875 PTSSPSPSIPNSPPPSASSPVVSPTSPPVTSPESLSPPNAPPIPPKAKPVVHKPSNLHPM 934
Query: 91 VTRSKNG 71
+TR+K+G
Sbjct: 935 LTRAKDG 941
>dbj|GAU26774.1| hypothetical protein TSUD_317720 [Trifolium subterraneum]
Length = 1262
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 8/71 (11%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSH--QVPVSSFHSSSLPI------LP 263
+KGYKCL P GRIYI++ V FNE FP+S+LF +S P + +SS+P+ LP
Sbjct: 585 YKGYKCLSPEGRIYISKDVLFNEHKFPYSQLFHSSSLGSSPSGTSSTSSVPMTIPSQTLP 644
Query: 262 TPRLSQPSSSN 230
TP S P+ ++
Sbjct: 645 TPTQSSPNPTH 655
>dbj|GAU41870.1| hypothetical protein TSUD_366180 [Trifolium subterraneum]
Length = 1276
Score = 60.1 bits (144), Expect = 1e-07
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSH--QVPVSSFHSSSLPI------LP 263
+KGYKCL P GRIYI++ V FNE FP+S+LF +S P + SSS+P+ LP
Sbjct: 681 YKGYKCLSPEGRIYISKDVLFNEHKFPYSQLFHSSSLGSSPSGTSSSSSVPLIIPSQTLP 740
Query: 262 TPRLSQPS 239
TP S P+
Sbjct: 741 TPTQSFPN 748
>dbj|GAU48593.1| hypothetical protein TSUD_179750 [Trifolium subterraneum]
Length = 1364
Score = 60.1 bits (144), Expect = 1e-07
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 9/72 (12%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPV---SSFHSSSLPI------L 266
+KGYKCL P GRIYI++ V FNE FP+S+LF +S P +S SS +P+ +
Sbjct: 686 YKGYKCLSPEGRIYISKDVLFNEQKFPYSQLFPSSSLGPSPSGTSSQSSPIPLIIPSQPI 745
Query: 265 PTPRLSQPSSSN 230
PTP S P+ ++
Sbjct: 746 PTPTQSSPNPTH 757
>ref|XP_015883747.1| PREDICTED: uncharacterized protein LOC107419521 [Ziziphus jujuba]
Length = 868
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -2
Query: 424 TEHKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFH 287
TEHKGYKCL SGR+YIA++V FNE DFPF+ F VSS H
Sbjct: 385 TEHKGYKCLDSSGRVYIAKSVKFNEKDFPFANGFPWKTNDGVSSVH 430
>ref|XP_015879622.1| PREDICTED: uncharacterized protein LOC107415746 [Ziziphus jujuba]
Length = 884
Score = 59.7 bits (143), Expect = 1e-07
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = -2
Query: 424 TEHKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSLP 272
TEHKGYK +HPSGR+Y+A++V FNE DFPF+ F ++ + F SSS P
Sbjct: 486 TEHKGYKYMHPSGRLYVAKSVKFNEFDFPFAAGFMSN--TSSAKFTSSSPP 534
>gb|KYP47787.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1299
Score = 59.7 bits (143), Expect = 1e-07
Identities = 40/127 (31%), Positives = 53/127 (41%), Gaps = 10/127 (7%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLFSTSHQVPVSSFHSSSLPILPTPRLSQPS 239
HKGYKCL SGRIYI++ V FNE FP+ LF + P + S++P L +P S
Sbjct: 807 HKGYKCLSKSGRIYISKDVVFNENRFPYLDLFVSKSVSPAPATSVSNIPSLISPPTLSSS 866
Query: 238 SSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITAPNVPPQSQAS----------HSMV 89
+ + SI++PN + S H M
Sbjct: 867 NPSQLALLESSASSDYGFLHSQSASVDSQPSSSISSPNTSAAASGSTSEPARPLNLHPMT 926
Query: 88 TRSKNGI 68
T SKNGI
Sbjct: 927 TCSKNGI 933
>gb|KYP64199.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1408
Score = 59.7 bits (143), Expect = 1e-07
Identities = 47/129 (36%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLF--STSHQVPVSSFHSSSLPILPTPRLSQ 245
HKGYKCL SGRIYI++ V FNE FP+ LF +TS +P +S S+LP L
Sbjct: 759 HKGYKCLSKSGRIYISKDVIFNEGRFPYHDLFVTATSDSIPATSV--STLPSLVCSH--N 814
Query: 244 PSSSNXXXXXXXXXXXXXXXXXXXXXXXXXXXPMSITAPNVPPQSQAS----------HS 95
PSSS ++ N PP S +S H
Sbjct: 815 PSSSTLVSPTVPTNSGSSESNFSLPSMPDN------SSTNSPPASSSSPSLSAPPLNIHP 868
Query: 94 MVTRSKNGI 68
M+TRSKNGI
Sbjct: 869 MITRSKNGI 877
>gb|PNX92571.1| histone deacetylase [Trifolium pratense]
Length = 1488
Score = 59.7 bits (143), Expect = 1e-07
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Frame = -2
Query: 418 HKGYKCLHPSGRIYIARTVAFNELDFPFSKLF----STSHQVPVSSFHSSSLPILPT 260
HKGY+CL PSGR+Y+++ V FNE FP+ +LF +SH P SF LP P+
Sbjct: 823 HKGYRCLSPSGRLYVSKDVLFNESRFPYKELFPISSGSSHSPPSKSFKLPPLPTFPS 879
>gb|PNX97517.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Trifolium pratense]
Length = 612
Score = 58.9 bits (141), Expect = 3e-07
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Frame = -2
Query: 424 TEHKGYKCLHPSGRIYIARTVAFNELDFPFSKLFS---TSHQVPVSSFHSSSLPI 269
T HKGYKCL PSGRI++++ V FNE FP+ LFS T++ P S+LPI
Sbjct: 4 TTHKGYKCLSPSGRIFVSKDVLFNEFRFPYESLFSSQNTAYSNPAPEVPLSTLPI 58