BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00036974
         (629 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU37771.1| hypothetical protein TSUD_102880 [Trifolium subt...   103   2e-30
dbj|GAU36460.1| hypothetical protein TSUD_166260 [Trifolium subt...   108   2e-30
gb|PNX97001.1| hypothetical protein L195_g020219 [Trifolium prat...   103   7e-30
dbj|GAU14523.1| hypothetical protein TSUD_250650 [Trifolium subt...   106   9e-30
dbj|GAU34422.1| hypothetical protein TSUD_393750 [Trifolium subt...   105   4e-29
gb|PNX80358.1| ribonuclease H, partial [Trifolium pratense]           100   5e-29
gb|PNX90114.1| endonuclease/exonuclease/phosphatase family prote...    94   6e-29
gb|PNY14675.1| ribonuclease H [Trifolium pratense]                     99   9e-29
gb|PNY16372.1| ribonuclease H, partial [Trifolium pratense]            96   1e-28
dbj|GAU24991.1| hypothetical protein TSUD_312260 [Trifolium subt...   102   1e-28
gb|PNY02556.1| ribonuclease H, partial [Trifolium pratense]            98   2e-28
gb|PNX83389.1| hypothetical protein L195_g039431, partial [Trifo...   101   2e-28
dbj|GAU43015.1| hypothetical protein TSUD_28340 [Trifolium subte...   103   2e-28
gb|PNX87709.1| endonuclease/exonuclease/phosphatase family prote...    96   2e-28
dbj|GAU33856.1| hypothetical protein TSUD_66430 [Trifolium subte...   103   3e-28
dbj|GAU40727.1| hypothetical protein TSUD_14120 [Trifolium subte...   103   3e-28
gb|PNX94206.1| hypothetical protein L195_g017377 [Trifolium prat...    95   4e-28
dbj|GAU40262.1| hypothetical protein TSUD_60520 [Trifolium subte...   103   5e-28
gb|PNX94516.1| ribonuclease H [Trifolium pratense]                     92   8e-28
dbj|GAU35928.1| hypothetical protein TSUD_69610 [Trifolium subte...   100   1e-27

>dbj|GAU37771.1| hypothetical protein TSUD_102880 [Trifolium subterraneum]
          Length = 1688

 Score =  103 bits (257), Expect(2) = 2e-30
 Identities = 46/110 (41%), Positives = 70/110 (63%)
 Frame = -1

Query: 332  SQEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIV 153
            SQE+ +W+QRAK+HWL+ GD+NT+FFH  AS R++RN + K+Q +NG   E Q+++C + 
Sbjct: 708  SQEDAFWRQRAKVHWLQGGDSNTKFFHAMASTRKKRNMIMKLQSENGEVMEKQEDLCNVA 767

Query: 152  KYYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            K Y++  FS      E +++ V   I +E N +L   F   EF  A+ QM
Sbjct: 768  KTYFDTLFSNDTGTSESILNYVPEAINEEDNNMLMAPFVKEEFRIALFQM 817



 Score = 57.4 bits (137), Expect(2) = 2e-30
 Identities = 29/88 (32%), Positives = 45/88 (51%)
 Frame = -2

Query: 622 NTQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINF 443
           N   K+S  F+FEN WL+ + L +VV   W    +  + ++L  C E L  W K  ++ F
Sbjct: 615 NRNVKRS--FRFENAWLKENELQDVVTSCWRRDEELEVLEKLNQCREDLERWGKQMRLRF 672

Query: 442 RKDINHCNALLSYLRDKMGKRTQYYLKR 359
           +KDI+ C   L  LR+      +Y + R
Sbjct: 673 KKDIDQCRVELEALREAEAFHEEYTITR 700


>dbj|GAU36460.1| hypothetical protein TSUD_166260 [Trifolium subterraneum]
          Length = 1012

 Score =  108 bits (271), Expect(2) = 2e-30
 Identities = 50/110 (45%), Positives = 75/110 (68%)
 Frame = -1

Query: 332 SQEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIV 153
           +QEE +WKQRAKI+WL++GD N+RFFH  ASAR++RN +T+++ D+G   + Q EVCE+ 
Sbjct: 242 AQEEAFWKQRAKIYWLRDGDTNSRFFHATASARKKRNEITQMKKDDGEVIQHQHEVCEVA 301

Query: 152 KYYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
           K Y+E+ FS        ++D +   IT+E+N  LT  F + EF +A+  M
Sbjct: 302 KNYFEQLFSPGQQGHNTMLDYIMPSITEENNNQLTSPFQIKEFKEALFAM 351



 Score = 51.6 bits (122), Expect(2) = 2e-30
 Identities = 24/75 (32%), Positives = 39/75 (52%)
 Frame = -2

Query: 619 TQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFR 440
           +++K   +FKFEN WL  + L  +V+G W    DR +  +L  C  +L  W +  +  +R
Sbjct: 146 SRRKIMREFKFENSWLYEEELEGIVQGGWEKDRDRGVTTKLKNCTNELNEWGRRLRNKYR 205

Query: 439 KDINHCNALLSYLRD 395
            +I  C   L  LR+
Sbjct: 206 VEIEECRNELDSLRN 220


>gb|PNX97001.1| hypothetical protein L195_g020219 [Trifolium pratense]
          Length = 1036

 Score =  103 bits (256), Expect(2) = 7e-30
 Identities = 44/110 (40%), Positives = 72/110 (65%)
 Frame = -1

Query: 332  SQEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIV 153
            SQE+ +W+QRAK+HWL+ GD+NT+FFH  AS R++RN + K+Q ++G   E Q+++C + 
Sbjct: 708  SQEDAFWRQRAKVHWLQNGDSNTKFFHAMASTRKKRNMIMKLQSESGEMMEKQEDLCNVA 767

Query: 152  KYYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            K Y++  FS +    E +++ V   I ++ N++L   F   EF  A+ QM
Sbjct: 768  KNYFDTLFSNNTSTSESILNYVPRTINEQDNDMLMAPFVKEEFKIALFQM 817



 Score = 55.8 bits (133), Expect(2) = 7e-30
 Identities = 28/84 (33%), Positives = 43/84 (51%)
 Frame = -2

Query: 622 NTQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINF 443
           N   K+S  F+FEN WL+ + L  VV  +W    +  + ++L  C E L  W K  ++ F
Sbjct: 615 NRNVKRS--FRFENAWLEENELQNVVTSSWRRDEELEVLEKLNQCREDLERWGKQMRLRF 672

Query: 442 RKDINHCNALLSYLRDKMGKRTQY 371
           +KDI+ C   L  LR+      +Y
Sbjct: 673 KKDIDQCRVELEALREDEAFHEEY 696


>dbj|GAU14523.1| hypothetical protein TSUD_250650 [Trifolium subterraneum]
          Length = 1572

 Score =  106 bits (264), Expect(2) = 9e-30
 Identities = 50/109 (45%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YW+QRAK+HWLKEGD NT+ FH  AS RQR   + K+ +++ I  + Q E+C++ K
Sbjct: 625 QEETYWRQRAKMHWLKEGDLNTKIFHMSASTRQRAKKIDKLVNEDNIEVKTQPEICQVAK 684

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+EK FS S  V EP++  +   +T E NE+LT   +  E   A+ QM
Sbjct: 685 NYFEKLFSASVTVHEPILSLIAPKVTVEDNEMLTATITKEELKAALFQM 733



 Score = 52.4 bits (124), Expect(2) = 9e-30
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
 Frame = -2

Query: 607 KSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDIN 428
           K+  F+FEN WL+   + EVVE  W    +  +  +   CAEKL  W + +++ F++++ 
Sbjct: 532 KTYAFRFENTWLKEYDIEEVVEDGWGRGSNIEVTNKTTRCAEKLKEWGRRKRMRFKQEVM 591

Query: 427 HCNALLSYLRDKMGK-RTQYY 368
            C+  +  LR    + R+Q Y
Sbjct: 592 ECSEEMDRLRGSHERARSQRY 612


>dbj|GAU34422.1| hypothetical protein TSUD_393750 [Trifolium subterraneum]
          Length = 1130

 Score =  105 bits (262), Expect(2) = 4e-29
 Identities = 49/109 (44%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YWKQRAK+HWL+EGD NTRFFH  A+AR ++  ++K+  DNG     Q+E+CE+ K
Sbjct: 212 QEEGYWKQRAKMHWLQEGDMNTRFFHMSATARSKKKKVSKLIADNGTEAHTQEELCEVAK 271

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F   D   +PV++ + S +TD  N  LT   +  E  +A+ QM
Sbjct: 272 SYFDTLFKPRDGDYDPVLNLIQSRVTDNDNVFLTAPITKVEIQQALFQM 320



 Score = 50.8 bits (120), Expect(2) = 4e-29
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = -2

Query: 595 FKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCNA 416
           F+FEN WL+   L +VV   W    +  +  R+  CA KL  W K +++ F+++I+ C  
Sbjct: 123 FRFENSWLKEPDLEDVVVDGWGGRENLEVVDRVTICANKLQRWGKKKRVRFKEEIDECVR 182

Query: 415 LLSYLR 398
            ++ LR
Sbjct: 183 RMNELR 188


>gb|PNX80358.1| ribonuclease H, partial [Trifolium pratense]
          Length = 700

 Score = 99.8 bits (247), Expect(2) = 5e-29
 Identities = 48/109 (44%), Positives = 68/109 (62%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YWKQRAK+HWLKEGD NT+FFH  AS RQR+  + K+ + + I  + Q E+C + K
Sbjct: 181 QEEIYWKQRAKMHWLKEGDMNTKFFHMSASTRQRKKKIEKLVNADNIEVKTQTEICAVAK 240

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F  +  V +P++  V+  IT E NE L    +  E  +A+ QM
Sbjct: 241 NYFDHLFRANATVQDPILSLVSPKITLEDNERLVAPITKDELKEALFQM 289



 Score = 56.2 bits (134), Expect(2) = 5e-29
 Identities = 24/68 (35%), Positives = 40/68 (58%)
 Frame = -2

Query: 595 FKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCNA 416
           F+FEN WL+ + + EVVE  W      +I  +   CAEKL NW + +++ F++++  C+ 
Sbjct: 92  FRFENIWLKEEDIDEVVEAGWGRERSADITSKTSRCAEKLRNWGRRKRMRFKQEVLECSE 151

Query: 415 LLSYLRDK 392
            L  LR +
Sbjct: 152 ELERLRGR 159


>gb|PNX90114.1| endonuclease/exonuclease/phosphatase family protein, partial
           [Trifolium pratense]
          Length = 444

 Score = 94.0 bits (232), Expect(2) = 6e-29
 Identities = 41/109 (37%), Positives = 68/109 (62%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           Q++ +W+QRAK HW ++GD NTRFFH  A++R++ N ++ ++DD+G+   D   +C + K
Sbjct: 333 QDDLFWRQRAKNHWYRDGDLNTRFFHASATSRRKVNRISYLKDDSGLRTTDISGMCNLAK 392

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+++ F +      PVI  +   I D+ NE LT  F + EF +A+  M
Sbjct: 393 NYFDELFQKQASTRGPVISTIMPTIFDDDNEKLTSPFKIEEFKEALFSM 441



 Score = 62.0 bits (149), Expect(2) = 6e-29
 Identities = 31/69 (44%), Positives = 38/69 (55%)
 Frame = -2

Query: 598 KFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCN 419
           KFKFEN W     L +VV  +WL   +R I  RL  CAE L  WSKN   N +K+I  C 
Sbjct: 243 KFKFENAWCIETELDDVVHRSWLSTLERPIMPRLEVCAEDLSQWSKNHCHNLKKEIEDCR 302

Query: 418 ALLSYLRDK 392
             L + RD+
Sbjct: 303 KKLQHARDQ 311


>gb|PNY14675.1| ribonuclease H [Trifolium pratense]
          Length = 1293

 Score = 99.0 bits (245), Expect(2) = 9e-29
 Identities = 47/109 (43%), Positives = 65/109 (59%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YW+QRAK+HWLKEGD NT+FFH  A++RQR   + K+ +D+ I    Q E+CE+  
Sbjct: 289 QEEAYWRQRAKMHWLKEGDLNTKFFHMSATSRQRAKKIGKLMNDDNIAVTSQPELCEVAL 348

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+   F  +    +PV+  +   IT E NE L +  S  E   A+ QM
Sbjct: 349 NYFNHLFKSNSTSHDPVLSLIAPKITQEDNESLVRPISKEELKDALFQM 397



 Score = 56.2 bits (134), Expect(2) = 9e-29
 Identities = 28/74 (37%), Positives = 41/74 (55%)
 Frame = -2

Query: 619 TQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFR 440
           T+  KS  F+FEN WL+ + +  VVE  W      +I  +   CAEKL  W K +++ F+
Sbjct: 192 TRNGKSYSFRFENSWLKEEDIGVVVEEGWGRERGTDITIKTARCAEKLKWWGKRKRMRFK 251

Query: 439 KDINHCNALLSYLR 398
           KD+  C+  L  LR
Sbjct: 252 KDVLECSEELERLR 265


>gb|PNY16372.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1540

 Score = 95.5 bits (236), Expect(2) = 1e-28
 Identities = 46/109 (42%), Positives = 64/109 (58%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YW+QRAK+HWL+EGD NT+FFH  AS R R   + K+ +   I      E+CE+  
Sbjct: 629 QEEAYWRQRAKMHWLREGDLNTKFFHMSASIRVRSKRIEKLVNGANIEVRTHPEICEVAL 688

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+++ F  +    +PV+  V   IT E NE LT  F+  E  +A+ QM
Sbjct: 689 NYFDQLFKANPSFQDPVLSLVTPRITQEDNERLTAPFTREELKEALFQM 737



 Score = 59.3 bits (142), Expect(2) = 1e-28
 Identities = 25/74 (33%), Positives = 43/74 (58%)
 Frame = -2

Query: 619 TQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFR 440
           T+  K+  F+FEN WL+ D + EVV+  W +     I  R+  CA+KL  W + +++ F+
Sbjct: 532 TRNGKNYSFRFENHWLKEDDVEEVVKEGWRVGGGGEITSRISLCADKLKGWGRRKRMRFK 591

Query: 439 KDINHCNALLSYLR 398
           ++I  C+  +  LR
Sbjct: 592 QEIIECSEEMERLR 605


>dbj|GAU24991.1| hypothetical protein TSUD_312260 [Trifolium subterraneum]
          Length = 1036

 Score =  102 bits (254), Expect(2) = 1e-28
 Identities = 51/135 (37%), Positives = 78/135 (57%)
 Frame = -1

Query: 407 ILKR*DGEEDAIXXXXXXXXXXXXLSQEECYWKQRAKIHWLKEGDNNTRFFHKFASARQR 228
           +L+   GEE+              L QEE YWKQRAK+HWLKEG  NT FFHK A+AR++
Sbjct: 237 VLRGNQGEEEGRRYQEIHDRHAVLLVQEEDYWKQRAKMHWLKEGGMNTSFFHKSATARRK 296

Query: 227 RNHLTKIQDDNGIWHEDQDEVCEIVKYYYEKFFSESDCVVEPVIDAVNSCITDEHNEILT 48
           + +++K+ D+ G+    Q+E+CE+ K Y++  F   +   EPV+  +   +T+E N  L 
Sbjct: 297 KKNISKLVDEGGMEVHTQEELCEVAKQYFDTLFKPKNGEQEPVLTLIQRRVTEEDNMYLA 356

Query: 47  KNFSLSEFTKAVKQM 3
              +  E  +A+ QM
Sbjct: 357 APITKVEIQQALFQM 371



 Score = 52.4 bits (124), Expect(2) = 1e-28
 Identities = 23/80 (28%), Positives = 44/80 (55%)
 Frame = -2

Query: 622 NTQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINF 443
           +++ + +  F+FEN WL+   L EVV   W    +  +  R+  CA  L +W + +K+ F
Sbjct: 165 SSRSRFNGSFRFENSWLREPDLEEVVLEGWGAHENIEVVDRVARCANILQSWGRKKKVKF 224

Query: 442 RKDINHCNALLSYLRDKMGK 383
           +++I+ C  ++  LR   G+
Sbjct: 225 KEEIDECVRVMEVLRGNQGE 244


>gb|PNY02556.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1024

 Score = 98.2 bits (243), Expect(2) = 2e-28
 Identities = 42/109 (38%), Positives = 69/109 (63%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YW+QRAK+HWL+EGD NT+FFH  A+ R ++  + K++++N +    Q E+CE+ K
Sbjct: 286 QEEAYWRQRAKMHWLREGDLNTKFFHTSATTRTKKKRIDKLKNENDMEVNTQQEICEVAK 345

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+++ F  +  + +PV++ ++  IT E N  L    +  E   A+ QM
Sbjct: 346 NYFDQLFKANASLHDPVLNLISPKITQEDNAYLLAEITKEEVKNALFQM 394



 Score = 56.2 bits (134), Expect(2) = 2e-28
 Identities = 24/73 (32%), Positives = 43/73 (58%)
 Frame = -2

Query: 616 QQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRK 437
           ++++   F+FEN WL+ + + EVV G+W    D  I  R+  CAEKL  W + +++ F++
Sbjct: 190 RERRHYSFRFENIWLKEEDINEVVTGSWQEREDVEIIDRITCCAEKLQGWGRRKRMRFKE 249

Query: 436 DINHCNALLSYLR 398
           ++  C   +  LR
Sbjct: 250 EVIECREEMERLR 262


>gb|PNX83389.1| hypothetical protein L195_g039431, partial [Trifolium pratense]
          Length = 522

 Score =  101 bits (251), Expect(2) = 2e-28
 Identities = 44/109 (40%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QE+ +W+QRAK HW ++GD NTRFFH  A++R++ N ++ ++DD+G    D   +CE+  
Sbjct: 265 QEDMFWRQRAKTHWYRDGDLNTRFFHASATSRKKVNRMSYLEDDSGRRISDSSGMCELAT 324

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+   F +   V +PVID + + I D  NE LT  F+++EF +A+  M
Sbjct: 325 NYFSNLFQKQHSVRDPVIDVIPTTILDSDNEYLTAPFTIAEFKEALFSM 373



 Score = 53.1 bits (126), Expect(2) = 2e-28
 Identities = 27/78 (34%), Positives = 39/78 (50%)
 Frame = -2

Query: 598 KFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCN 419
           KFKFEN W    GL +VV   W    D+ I  +L  CA++L +WS++     R +I  C 
Sbjct: 175 KFKFENAWCLESGLDDVVYHCWYNYSDKTIVPKLEACADELSDWSRSHCHKRRYEIEECR 234

Query: 418 ALLSYLRDKMGKRTQYYL 365
             L  +R+  G     Y+
Sbjct: 235 RKLLQVREXGGDNNANYI 252


>dbj|GAU43015.1| hypothetical protein TSUD_28340 [Trifolium subterraneum]
          Length = 1027

 Score =  103 bits (258), Expect(2) = 2e-28
 Identities = 48/109 (44%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YWKQRAK+HWL+EGD NTRFFH  A+AR ++  +TK+  +NG     Q+E+CE+ K
Sbjct: 283 QEEGYWKQRAKMHWLQEGDMNTRFFHMSATARSKKKKVTKLVAENGTEAHTQEELCEVAK 342

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F   D   +PV++ +   +TD+ N  LT   +  E  +A+ QM
Sbjct: 343 SYFDNLFKPRDGDHDPVLNLIQPRVTDDDNFFLTAPITKVEIQQALFQM 391



 Score = 50.1 bits (118), Expect(2) = 2e-28
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = -2

Query: 604 SPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINH 425
           S  F+FEN WL+   L +VV   W    +  +  R+  CA KL  W K +++ F+++I+ 
Sbjct: 191 SYSFRFENSWLKESDLEDVVVEGWGGRENLEVVDRVTRCANKLQRWGKRKRVRFKEEIDE 250

Query: 424 CNALLSYLR 398
           C   ++ LR
Sbjct: 251 CVRQMNELR 259


>gb|PNX87709.1| endonuclease/exonuclease/phosphatase family protein, partial
           [Trifolium pratense]
          Length = 360

 Score = 95.5 bits (236), Expect(2) = 2e-28
 Identities = 42/109 (38%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           Q++ +W+QRAK HW K+GD NTRFFH  A++R++ N ++ ++D NG+   D   +C + K
Sbjct: 246 QDDMFWRQRAKTHWYKDGDLNTRFFHASATSRKKVNRISFLEDANGLRITDNPGMCLVAK 305

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+ + F + + V +PVI  +++ I +  NE LT  F+  EF +A+  M
Sbjct: 306 DYFNELFHKQNSVRDPVISVISTTILESDNEQLTAPFTKEEFKEALFSM 354



 Score = 58.5 bits (140), Expect(2) = 2e-28
 Identities = 31/78 (39%), Positives = 41/78 (52%)
 Frame = -2

Query: 598 KFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCN 419
           KFKFEN W     L EVV   W    D+ I  RL  CAE+L  WS+N   N +K+I  C 
Sbjct: 156 KFKFENAWRLESELDEVVHRCWNNYSDKLIMPRLEACAEELSLWSRNHCHNLKKEIEECR 215

Query: 418 ALLSYLRDKMGKRTQYYL 365
             L  +R++ G+    Y+
Sbjct: 216 KKLLQVREQGGENNANYV 233


>dbj|GAU33856.1| hypothetical protein TSUD_66430 [Trifolium subterraneum]
          Length = 757

 Score =  103 bits (258), Expect(2) = 3e-28
 Identities = 48/109 (44%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YWKQRAK+HWL+EGD N RFFH  A+AR ++  +TK+  DNG     Q+E+CE+ K
Sbjct: 142 QEEGYWKQRAKMHWLQEGDMNMRFFHMSATARSKKKKVTKLVADNGTEAHSQEELCEVAK 201

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F   D   +PV++ ++  +TD+ N  LT   +  E  +A+ QM
Sbjct: 202 SYFDNLFKPRDGDHDPVLNLIHPRVTDDDNFFLTAPITKVEIQQALFQM 250



 Score = 49.7 bits (117), Expect(2) = 3e-28
 Identities = 23/69 (33%), Positives = 38/69 (55%)
 Frame = -2

Query: 604 SPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINH 425
           S  F+FEN WL+   L +VV   W    +  +  R+  CA KL  W K +++ F+++I+ 
Sbjct: 50  SYSFRFENSWLKEPDLEDVVVEGWGGRENLEVVDRVTRCANKLQRWGKRKRVRFKEEIDE 109

Query: 424 CNALLSYLR 398
           C   ++ LR
Sbjct: 110 CVRRMNELR 118


>dbj|GAU40727.1| hypothetical protein TSUD_14120 [Trifolium subterraneum]
          Length = 1098

 Score =  103 bits (257), Expect(2) = 3e-28
 Identities = 49/109 (44%), Positives = 71/109 (65%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YWKQRAK+HWL+EGD NTRFFH  A+AR ++  +TK+  DNG     Q+E+CE+ K
Sbjct: 668 QEEGYWKQRAKMHWLQEGDMNTRFFHMPATARSKKKKVTKLIADNGTEAHTQEELCEVAK 727

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F +     +PV++ + S +TD+ N  LT   +  E  +A+ QM
Sbjct: 728 SYFDTLFKQRYGDHDPVLNLIQSQVTDDDNFFLTTPITKVEIQQALFQM 776



 Score = 49.7 bits (117), Expect(2) = 3e-28
 Identities = 24/68 (35%), Positives = 38/68 (55%)
 Frame = -2

Query: 625 VNTQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKIN 446
           + TQ K S  F+FEN WL+   L +VV   W    +  +  R+  CA KL  W K +++ 
Sbjct: 571 IGTQFKHS--FRFENSWLKEPDLEDVVVEGWGGRENLEVVDRVTRCANKLQRWGKKKRVR 628

Query: 445 FRKDINHC 422
           F+++I+ C
Sbjct: 629 FKEEIDQC 636


>gb|PNX94206.1| hypothetical protein L195_g017377 [Trifolium pratense]
          Length = 440

 Score = 95.1 bits (235), Expect(2) = 4e-28
 Identities = 43/106 (40%), Positives = 61/106 (57%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YW+QRAK+HWLKEGD NT+FFH  AS RQR+  + K+  +  I    Q E+CE+  
Sbjct: 332 QEETYWRQRAKMHWLKEGDLNTKFFHMSASTRQRKKKIDKLVTEESIQVRTQPEICEVAM 391

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAV 12
            Y+   F     V +P++  +   +T E NE L    +  E  +A+
Sbjct: 392 NYFNHLFKADTTVHDPILSLIGPKVTQEDNERLLAPITKEELKEAL 437



 Score = 58.2 bits (139), Expect(2) = 4e-28
 Identities = 25/74 (33%), Positives = 44/74 (59%)
 Frame = -2

Query: 619 TQQKKSPKFKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFR 440
           T+ +K+  F+FEN WL  + + EVVE  W      +I ++ G CAEKL  W + +++ F+
Sbjct: 235 TRNQKTYSFRFENIWLHEEDIDEVVEEGWGRDSSDDIIRKTGRCAEKLKGWGRRKRMRFK 294

Query: 439 KDINHCNALLSYLR 398
           +++  C+  +  LR
Sbjct: 295 QEVMECSEEMERLR 308


>dbj|GAU40262.1| hypothetical protein TSUD_60520 [Trifolium subterraneum]
          Length = 942

 Score =  103 bits (258), Expect(2) = 5e-28
 Identities = 48/109 (44%), Positives = 70/109 (64%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YWKQRAK+HWL+EGD NTRFFH  A+ R ++  +TK+  DNG     Q+E+CE+ K
Sbjct: 243 QEEGYWKQRAKMHWLQEGDMNTRFFHMSATVRSKKRKVTKLIADNGSEAHTQEELCEVAK 302

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F   D   +PV++ +   +TD+ N +LT   +  E  +A+ QM
Sbjct: 303 SYFDTLFKPRDGDHDPVLNLIQPRVTDDDNFVLTAPITKVEIQQALFQM 351



 Score = 48.9 bits (115), Expect(2) = 5e-28
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = -2

Query: 595 FKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCNA 416
           F+FEN WL+   L +VV   W    +  +  R+  CA KL  W K ++I F+++I+ C  
Sbjct: 154 FRFENSWLKEPDLEDVVVEGWGGRENLEVVDRVTRCANKLQRWGKKKRIRFKEEIDECVK 213

Query: 415 LLSYLR 398
            ++ +R
Sbjct: 214 RMNEIR 219


>gb|PNX94516.1| ribonuclease H [Trifolium pratense]
          Length = 1358

 Score = 91.7 bits (226), Expect(2) = 8e-28
 Identities = 43/109 (39%), Positives = 63/109 (57%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE +WKQRAK+HWLKEGD NT+FFH  A+AR +   + K+  D  +      ++CE+ +
Sbjct: 332 QEESFWKQRAKMHWLKEGDLNTKFFHASATARTKIKKIDKLTSDENVIVTSHQDLCEVAR 391

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y+++ F       EPV+  ++  I+ E NE L    S  E   A+ QM
Sbjct: 392 NYFDQLFKSKLSDQEPVLSLISPRISTEDNERLVAPISKEELRSALFQM 440



 Score = 60.5 bits (145), Expect(2) = 8e-28
 Identities = 27/66 (40%), Positives = 38/66 (57%)
 Frame = -2

Query: 595 FKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCNA 416
           FKFEN WLQ + L EVVE  W    D  + ++L  CAE L  W K +K+ F++++    A
Sbjct: 243 FKFENCWLQEEDLAEVVEAGWREERDAEVVEKLACCAESLQKWGKRKKVKFQEEVAEYEA 302

Query: 415 LLSYLR 398
            +  LR
Sbjct: 303 EMGRLR 308


>dbj|GAU35928.1| hypothetical protein TSUD_69610 [Trifolium subterraneum]
          Length = 1447

 Score =  100 bits (248), Expect(2) = 1e-27
 Identities = 46/109 (42%), Positives = 67/109 (61%)
 Frame = -1

Query: 329 QEECYWKQRAKIHWLKEGDNNTRFFHKFASARQRRNHLTKIQDDNGIWHEDQDEVCEIVK 150
           QEE YW QR K+HWL+EGD NTRFFH  A+   ++  +TK+  DNG     Q+E+CE+ K
Sbjct: 563 QEEGYWIQRVKMHWLQEGDMNTRFFHMSATVHSKKKKVTKLIADNGTEEHTQEELCEVAK 622

Query: 149 YYYEKFFSESDCVVEPVIDAVNSCITDEHNEILTKNFSLSEFTKAVKQM 3
            Y++  F   D   +PV++ +   +TDE N +LT   +  E  +A+ QM
Sbjct: 623 SYFDTLFKPRDGDHDPVLNLIQPRVTDEDNVVLTAPITKVEIQQALFQM 671



 Score = 51.6 bits (122), Expect(2) = 1e-27
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = -2

Query: 595 FKFENKWLQMDGLVEVVEGAWLLACDRNIEKRLGFCAEKLMNWSKNQKINFRKDINHCNA 416
           F+FEN WL+   L +VV   W    +  +  R+  CA KL  W K ++I F+++I+ C  
Sbjct: 474 FRFENSWLKEPNLEDVVIEGWGGRENLEVVDRVSICANKLQRWGKTKRIRFKEEIDECVR 533

Query: 415 LLSYLR 398
            ++ LR
Sbjct: 534 RMNELR 539