BLASTX nr result

ID: Rehmannia29_contig00036859 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00036859
         (474 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit ...    56   1e-06
gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    57   1e-06
gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit ...    56   4e-06

>gb|KZV25510.1| replication protein A 70 kDa DNA-binding subunit B-like [Dorcoceras
           hygrometricum]
          Length = 161

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
 Frame = +1

Query: 250 IQQFEKLLKEGRIYAIRKFIIKS--YMYKTTTIKNKNLFCGKTQ-CEIFNNLFPRFIFKF 420
           + +   +LK+G ++AI+  I+      YKTTT K K  F  KT  CEIF++ FP  +F F
Sbjct: 47  LDKVRHILKDGHLFAIKNIIVAENRMKYKTTTSKYKINFITKTHVCEIFDDSFPSIMFDF 106

Query: 421 KSFIYMSNAEKVNGTLLF 474
           KSF  + NAE +  T+LF
Sbjct: 107 KSFNDVKNAE-IEETMLF 123


>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 57.0 bits (136), Expect = 1e-06
 Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
 Frame = +1

Query: 250 IQQFEKLLKEGRIYAIRKFIIKS--YMYKTTTIKNKNLFCGKTQ-CEIFNNLFPRFIFKF 420
           + + + +LKEG ++AI+  I+      YKTT  K K  F  KT  CEIF++ FP  +F F
Sbjct: 47  LDRVKPILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEIFDDSFPSMMFDF 106

Query: 421 KSFIYMSNAEKVNGTLLF 474
           KSF  + NAE ++ T+LF
Sbjct: 107 KSFTNVKNAE-IDETMLF 123


>gb|KZV17224.1| Replication protein A 70 kDa DNA-binding subunit [Dorcoceras
           hygrometricum]
          Length = 388

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 33/72 (45%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
 Frame = +1

Query: 268 LLKEGRIYAIRKFIIKS--YMYKTTTIKNKNLFCGKTQ-CEIFNNLFPRFIFKFKSFIYM 438
           +LKEG ++AI+  I+      YKTT  K K  F  KT  CEIF++ FP  +F FKSF  +
Sbjct: 133 ILKEGHLFAIKNIIVAENRMKYKTTASKYKINFITKTHVCEIFDDSFPSMMFDFKSFTNV 192

Query: 439 SNAEKVNGTLLF 474
            NAE +  T+LF
Sbjct: 193 KNAE-IEETMLF 203


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