BLASTX nr result
ID: Rehmannia29_contig00035815
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Rehmannia29_contig00035815 (876 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 346 e-112 gb|KZV30316.1| hypothetical protein F511_28209 [Dorcoceras hygro... 271 2e-88 gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposo... 278 8e-86 gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 277 7e-85 gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygro... 267 9e-85 gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposo... 270 1e-84 dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 275 4e-83 gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposo... 267 8e-82 emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] 273 2e-81 emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] 273 2e-81 dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt... 274 3e-81 gb|PNX96445.1| copia LTR rider [Trifolium pratense] 276 3e-81 emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] 271 2e-79 gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 271 3e-79 gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 271 3e-79 gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 271 4e-79 emb|CAJ86192.1| H0306F03.15 [Oryza sativa] 268 7e-79 gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 270 9e-79 dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] 270 1e-78 emb|CAJ86151.1| H0413E07.4 [Oryza sativa] 268 3e-78 >ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Erythranthe guttata] Length = 598 Score = 346 bits (887), Expect = e-112 Identities = 167/289 (57%), Positives = 213/289 (73%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 EWL+DSAC++HMTP + +F+ Y ++N V++A+ V G+GTVCLK +G VLTL + Sbjct: 16 EWLLDSACSYHMTPRREVFSDYVQMKNCGVTLADGTMIVVNGIGTVCLKFVSGSVLTLKN 75 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 368 VRHVP LS+NLISCA+LE DG+ G WG G M +M+GS + KA + N+YV A+ + Sbjct: 76 VRHVPTLSHNLISCAVLEDDGFRGDWGDGCMNIMKGSRYLFKALRMGNMYVCSAESSA-- 133 Query: 369 PNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQ 548 S+N V NDL++LWHK LGH+S+K L IL FG +K+ +++ C+SC+ GK Sbjct: 134 --SMNVV----QNDLSELWHKGLGHMSNKWLSILHKNQYFGNDKVSSVTLCDSCILGKQT 187 Query: 549 RVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNK 728 V FP +P S T++LEY+HADVWGP+SVPT+GGNRYFLSIIDDYSRKV+V L+K K Sbjct: 188 HVLFPEYPSPNLSRCTEILEYIHADVWGPTSVPTYGGNRYFLSIIDDYSRKVFVFLLKQK 247 Query: 729 SDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 SDVFDKFKTWKTLIENQTGKRIK LRTDNG+EFCN DNLC GI+R Sbjct: 248 SDVFDKFKTWKTLIENQTGKRIKTLRTDNGIEFCNLEFDNLCANSGIRR 296 >gb|KZV30316.1| hypothetical protein F511_28209 [Dorcoceras hygrometricum] Length = 207 Score = 271 bits (693), Expect = 2e-88 Identities = 128/210 (60%), Positives = 159/210 (75%), Gaps = 2/210 (0%) Frame = +3 Query: 222 ISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYVPNSV--NAVAT 395 ISCA LE +G EGRWG G MK+++GS+++ KA K NLYV HA NSV A Sbjct: 5 ISCAALEDEGLEGRWGNGCMKIIKGSLVLFKAVKLNNLYVCHA-------NSVCSKASVN 57 Query: 396 PVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTN 575 V ND+TDLWH+ LGH+SS+GL+IL +GCFG +KL + FC+SC+YGK RV FP+ Sbjct: 58 SVQNDVTDLWHRILGHMSSRGLEILHKQGCFGTDKLSCVPFCDSCIYGKQHRVNFPALPR 117 Query: 576 PKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKT 755 KQS S+++L+Y+HADVW PSS PT GG+RYFL++IDDYSRK+ V L+KNK DVFDKF+T Sbjct: 118 SKQSVSSEILDYIHADVWRPSSEPTQGGSRYFLAVIDDYSRKLRVFLLKNKYDVFDKFRT 177 Query: 756 WKTLIENQTGKRIKVLRTDNGLEFCNQLMD 845 WKTLIENQT ++IK LRTDNGLEFCN D Sbjct: 178 WKTLIENQTSRKIKTLRTDNGLEFCNSQFD 207 >gb|KYP46254.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 609 Score = 278 bits (710), Expect = 8e-86 Identities = 135/289 (46%), Positives = 186/289 (64%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++DS C++HM P + F TY G V M ND C+ IG+GT+ +K+ G + TL + Sbjct: 213 QWVLDSGCSYHMCPNRSWFLTYEKKSGGDVFMGNDMACKTIGIGTIQIKMHDGVIRTLTE 272 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 368 VRHVPDL NLIS +L G++ GVM++ +GS ++ + K NLY+L + + Sbjct: 273 VRHVPDLKKNLISVGVLHTKGFKCNVEGGVMEISKGSTVVIRGIKKGNLYMLQGS-TNLI 331 Query: 369 PNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQ 548 SV+ VA + DLT LWH RLGH+S +G+ +L+ + G + + L FCE CV GKH Sbjct: 332 SESVS-VADKHTPDLTHLWHMRLGHMSERGMMVLRKQKLLGDHTVKELKFCEHCVVGKHH 390 Query: 549 RVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNK 728 R+KFP + +S L+Y+H+D WGPS VP+ GG RYFLSIIDDYS W+ +MK+K Sbjct: 391 RIKFPKAQHTTKST----LDYVHSDCWGPSRVPSLGGGRYFLSIIDDYSGMTWIFIMKHK 446 Query: 729 SDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 + F FK WK L+ENQTGKRIK LRTDNGLEFC+ ++ C + GI R Sbjct: 447 NQAFKYFKEWKILVENQTGKRIKRLRTDNGLEFCSAEFNDYCKKEGIVR 495 >gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 690 Score = 277 bits (709), Expect = 7e-85 Identities = 131/289 (45%), Positives = 186/289 (64%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 EW++DS CTFHM P+K LF T V +G V M ND +C++ G+GT+ +K G + TL++ Sbjct: 286 EWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGIGTIQIKTHDGTIKTLSN 345 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 368 VR +PDL NLIS LE G + GV+K+ +G++++ KA + +LY+L S V Sbjct: 346 VRFIPDLKRNLISLGTLESLGCKYSAEGGVLKVSKGAIVLLKANRIGSLYILQG---SIV 402 Query: 369 PNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQ 548 S ++ D T LWH RLGH+S KG+ +L +G G + L FCE CV+GK + Sbjct: 403 TGSAAVSSSMSDKDATKLWHMRLGHMSEKGMHLLSKQGLLGNQGIGKLEFCEHCVFGKQK 462 Query: 549 RVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNK 728 RV F + T+ + L+Y+H+D+WGPS VP++GG RY ++IIDD+SRKVWV +++K Sbjct: 463 RVSFSTATHRTKGT----LDYIHSDLWGPSKVPSYGGCRYMMTIIDDFSRKVWVYFLRHK 518 Query: 729 SDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 ++ F FK WKTL+E QTGK++K LRTDNGLEFC + C GI R Sbjct: 519 NETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFNEFCANHGIAR 567 >gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygrometricum] Length = 345 Score = 267 bits (682), Expect = 9e-85 Identities = 122/199 (61%), Positives = 151/199 (75%) Frame = +3 Query: 279 MKLMRGSMIIAKAEKNRNLYVLHAKHDSYVPNSVNAVATPVSNDLTDLWHKRLGHISSKG 458 MK+++GS+++ KA++ NLYV +A P + +D+T+LWH RLGH+SSKG Sbjct: 1 MKILKGSLVLFKADRLNNLYVCNAN-----PICDKICVNSIKSDMTNLWHNRLGHMSSKG 55 Query: 459 LDILQNKGCFGKNKLDALSFCESCVYGKHQRVKFPSPTNPKQSASTDLLEYLHADVWGPS 638 L+ L +GCFG +KL + FCESCVYGK RV FP+ NPK + + +LEY+HADVWGP+ Sbjct: 56 LETLHKQGCFGNDKLSCMPFCESCVYGKQHRVSFPTAPNPKVTVCSTVLEYVHADVWGPA 115 Query: 639 SVPTHGGNRYFLSIIDDYSRKVWVVLMKNKSDVFDKFKTWKTLIENQTGKRIKVLRTDNG 818 S PT GGNRYFLSIIDD+SRKVWV L+KNKSDVFD FK WKTL ENQTGK+IK LRTDNG Sbjct: 116 SEPTQGGNRYFLSIIDDFSRKVWVFLLKNKSDVFDSFKNWKTLTENQTGKKIKTLRTDNG 175 Query: 819 LEFCNQLMDNLCDEFGIKR 875 LEFCN L D LC++ GIKR Sbjct: 176 LEFCNSLFDELCEQCGIKR 194 >gb|KYP50611.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan] Length = 448 Score = 270 bits (690), Expect = 1e-84 Identities = 132/289 (45%), Positives = 182/289 (62%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++DS C++HM P + F TY G V M ND C+ +G+GT+ L++ G + TL + Sbjct: 52 QWVLDSGCSYHMCPNRSWFLTYEERLGGRVFMGNDMPCKTVGIGTIQLRMHDGVIRTLTE 111 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 368 VRHVPDL NLIS +L+ G++ GVM++ RGS ++ + K NLY+L S + Sbjct: 112 VRHVPDLKKNLISVGVLDSKGFKCNVKNGVMEIKRGSTVVMRGFKKGNLYMLQGSTSS-I 170 Query: 369 PNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQ 548 SV+ VA DLT LWH RLGH+S +G+ IL + G + + L FCE CV+GK Sbjct: 171 SESVS-VAEKNIPDLTYLWHMRLGHMSERGMMILSRQQLLGNHTVKELRFCEHCVFGKQH 229 Query: 549 RVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNK 728 R+KFP Q ++ L+Y+H+D WGPS VP+ GG RYFLSIIDDYSR W+ + K+K Sbjct: 230 RIKFPKA----QHSTKSTLDYIHSDCWGPSQVPSLGGGRYFLSIIDDYSRMTWIFITKHK 285 Query: 729 SDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 + F FK WK L+E Q KR+K LRTDNGLEFC++ ++ C GI R Sbjct: 286 NQAFKCFKEWKILMEKQISKRVKRLRTDNGLEFCSKEFNDFCKAEGIAR 334 >dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] Length = 778 Score = 275 bits (702), Expect = 4e-83 Identities = 129/291 (44%), Positives = 196/291 (67%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY +VQ G+V M +D C+V G+GTV +K+ G + TL+D Sbjct: 265 QWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 324 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 325 VRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 381 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 382 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYGQSIGKLKFCEHCIFGK 441 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 442 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLK 497 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K FD FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 498 HKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 548 >gb|KYP59893.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan] Length = 593 Score = 267 bits (682), Expect = 8e-82 Identities = 132/289 (45%), Positives = 183/289 (63%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++DS C++HM P + F TY G V M ND C+ I +GT+ +K+ G + TL + Sbjct: 265 QWVLDSGCSYHMCPNRSWFLTYEKKFGGDVFMGNDMACKTISIGTIQIKMHDGVIRTLTE 324 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 368 VRHVPDL NLIS +L+ G++ GVM++ +GS I+ + K NLY+L + + Sbjct: 325 VRHVPDLKKNLISVGVLDTKGFKCNVEGGVMEINKGSTIVIRGIKKGNLYMLQGS-TNLI 383 Query: 369 PNSVNAVATPVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQ 548 S++ VA + DLT LWH RLGH+S +G+ +L + + + L FCE CV GKH Sbjct: 384 SESIS-VADKHTLDLTRLWHMRLGHMSERGMMVLSKQKLLRDHTVKELKFCEHCVLGKHH 442 Query: 549 RVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNK 728 R KFP + +S L+Y+H++ WGPS VP+ GG RYFLSIIDDYSR W+ +MK+K Sbjct: 443 RSKFPKAQHTTKST----LDYVHSNCWGPSRVPSLGGGRYFLSIIDDYSRMTWIFIMKHK 498 Query: 729 SDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 + F FK WK L+ENQTGKRIK LRTDN LEFC+ ++ C + GI R Sbjct: 499 NQAFKYFKEWKILVENQTGKRIKRLRTDNSLEFCSAEFNDYCKKEGIVR 547 >emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group] Length = 944 Score = 273 bits (699), Expect = 2e-81 Identities = 128/291 (43%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY +VQ G+V M +D C+V G+G V +K+ G + TL+D Sbjct: 131 QWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSD 190 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 191 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 247 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 248 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 307 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 308 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLK 363 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K FD FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 364 HKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 414 >emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa] Length = 944 Score = 273 bits (699), Expect = 2e-81 Identities = 128/291 (43%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY +VQ G+V M +D C+V G+G V +K+ G + TL+D Sbjct: 131 QWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIKMFDGCISTLSD 190 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 191 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 247 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 248 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 307 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 308 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRKVWPYFLK 363 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K FD FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 364 HKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 414 >dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum] Length = 1006 Score = 274 bits (700), Expect = 3e-81 Identities = 138/289 (47%), Positives = 191/289 (66%), Gaps = 1/289 (0%) Frame = +3 Query: 12 WLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLNDV 191 W++DS C+ H+ P K F T + G V + N+K C+V G G++ LK+ L +V Sbjct: 113 WVMDSGCSCHICPRKEYFETLELKEGGVVRLGNNKACKVQGTGSIRLKMYDDRDFLLKNV 172 Query: 192 RHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYVP 371 R++P+L NLIS +M ++ GY R +GVM++ G+++IAK K LY+L K + + Sbjct: 173 RYIPELKRNLISISMFDNLGYCTRIERGVMRISHGALVIAKGSKMNGLYIL--KGSTVIS 230 Query: 372 NSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKHQ 548 N A+ T V N D+T LWH RLGH+S +GL L +G G+ KL+ L FC++C GK Sbjct: 231 N---ALVTSVENADITKLWHLRLGHVSERGLVELAKQGLLGQEKLNKLDFCDNCTLGKQH 287 Query: 549 RVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKNK 728 +VKF + S+ EY+H+D+WGP+SVPTHGG YFLSIIDDYSR+VWV ++KNK Sbjct: 288 KVKFGVGVHK----SSRPFEYVHSDLWGPASVPTHGGGSYFLSIIDDYSRRVWVHIIKNK 343 Query: 729 SDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 SDVF+KFK W TLIENQ G ++KVLRTDNGLEF ++ + C + GIKR Sbjct: 344 SDVFEKFKEWHTLIENQIGTKLKVLRTDNGLEFVSEQFNEFCRKKGIKR 392 >gb|PNX96445.1| copia LTR rider [Trifolium pratense] Length = 1318 Score = 276 bits (707), Expect = 3e-81 Identities = 135/290 (46%), Positives = 187/290 (64%), Gaps = 1/290 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 EW++DS CT+HMTP K LF GSV + N+K C++ GVG+V KL + L + Sbjct: 281 EWIMDSGCTWHMTPNKDLFEELCDQDGGSVLLGNNKACKIAGVGSVRFKLHDESIRLLTE 340 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAEKNRNLYVLHAKHDSYV 368 VR+VPDL NL+S + GY + K ++++M+GS + + K + LY L A+ V Sbjct: 341 VRYVPDLKRNLLSLGEFDKKGYVFQGEKSILRVMKGSKEVLRGVKKQGLYTLEAE---VV 397 Query: 369 PNSVNAVAT-PVSNDLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGKH 545 S N V+T P+S T++WH RLGH+S +GL L + G +K++ L FCE CV+GK Sbjct: 398 SGSTNVVSTKPLSK--TEIWHMRLGHVSERGLVELGKQNLLGGDKIEKLKFCEPCVFGKS 455 Query: 546 QRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMKN 725 RVKF N + + L+Y+HAD+WGP+ P+H G RYFLSI+DDYSRK+WV + K Sbjct: 456 CRVKF----NKGKQRTHGSLDYIHADLWGPARCPSHSGARYFLSIVDDYSRKLWVFIQKT 511 Query: 726 KSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 K + F+ FK+WKTL+ENQTG+++K LRTDNGLEFCN+ D C GI R Sbjct: 512 KDETFENFKSWKTLVENQTGRKVKRLRTDNGLEFCNEAFDIFCAASGIAR 561 >emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group] Length = 1181 Score = 271 bits (692), Expect = 2e-79 Identities = 127/291 (43%), Positives = 193/291 (66%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY VQ G+V M +D C+V G+GTV +K+ G + TL+D Sbjct: 299 QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 358 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA K+ NLY L + Sbjct: 359 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKASIKSANLYHLQG---TT 415 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V V+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 416 ILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSISKLKFCEHCIFGK 475 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 476 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLK 531 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K F+ FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 532 HKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 582 >gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1241 Score = 271 bits (692), Expect = 3e-79 Identities = 128/291 (43%), Positives = 193/291 (66%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY +VQ G+V M +D C+V G+GTV +K+ G + TL D Sbjct: 208 QWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLLD 267 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K NLY L + Sbjct: 268 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKYANLYHLRG---TT 324 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 325 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 384 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 385 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRKVWPYFLK 440 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K FD FK WKT++E QT +++K+LRTDNG+E C+++ + C GI R Sbjct: 441 HKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSYCKSEGIVR 491 >gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1280 Score = 271 bits (692), Expect = 3e-79 Identities = 127/289 (43%), Positives = 194/289 (67%), Gaps = 2/289 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+A T+HM P + F TY ++Q G+V M +D C+V G+GTV +K+ GY+ TL+D Sbjct: 334 QWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSD 393 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 394 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 450 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH+S GL L + + L FCE C++GK Sbjct: 451 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGK 510 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 511 HKRVKFNTSTHTTEG----ILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLK 566 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGI 869 +K FD FK WKT++E QT K++K+LRTDNG+EFC+++ + C GI Sbjct: 567 HKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGI 615 >gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1312 Score = 271 bits (692), Expect = 4e-79 Identities = 127/289 (43%), Positives = 194/289 (67%), Gaps = 2/289 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+A T+HM P + F TY ++Q G+V M +D C+V G+GTV +K+ GY+ TL+D Sbjct: 334 QWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIKMFDGYIRTLSD 393 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 394 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 450 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH+S GL L + + L FCE C++GK Sbjct: 451 ILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDGQSIGKLKFCEHCIFGK 510 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 511 HKRVKFNTSTHTTEG----ILDYVHSDLWGPACKTSFGGARYMMTIVDDYSRKVWPYFLK 566 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGI 869 +K FD FK WKT++E QT K++K+LRTDNG+EFC+++ + C GI Sbjct: 567 HKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFKSYCKSEGI 615 >emb|CAJ86192.1| H0306F03.15 [Oryza sativa] Length = 1037 Score = 268 bits (684), Expect = 7e-79 Identities = 126/291 (43%), Positives = 194/291 (66%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY VQ G+V M +D C+V G+GTV +K+ G + TL+D Sbjct: 116 QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 175 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 176 VRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQG---TT 232 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V V+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 233 ILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGK 292 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I++DYSRKVW +K Sbjct: 293 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLK 348 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K F+ FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 349 HKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMR 399 >gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 2340 Score = 270 bits (690), Expect = 9e-79 Identities = 126/291 (43%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++++AC +HM P + F TY +VQ G+V M +D C+V G+GTV +K+ G + TL+D Sbjct: 506 QWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 565 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 566 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 622 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH++ GL L +G + L FCE C++GK Sbjct: 623 ILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 682 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 683 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLK 738 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K FD FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 739 HKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 789 >dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group] Length = 1601 Score = 270 bits (690), Expect = 1e-78 Identities = 126/291 (43%), Positives = 195/291 (67%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++++AC +HM P + F TY +VQ G+V M +D C+V G+GTV +K+ G + TL+D Sbjct: 299 QWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 358 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 359 VRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLRG---TT 415 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V AV+ +SN D T+LWH RLGH++ GL L +G + L FCE C++GK Sbjct: 416 ILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDGQSIGKLKFCEHCIFGK 475 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I+DDYSRKVW +K Sbjct: 476 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRKVWPYFLK 531 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K FD FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 532 HKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIVR 582 >emb|CAJ86151.1| H0413E07.4 [Oryza sativa] Length = 1205 Score = 268 bits (684), Expect = 3e-78 Identities = 126/291 (43%), Positives = 194/291 (66%), Gaps = 2/291 (0%) Frame = +3 Query: 9 EWLIDSACTFHMTPFKHLFNTYASVQNGSVSMANDKKCQVIGVGTVCLKLDTGYVLTLND 188 +W++D+ACT+HM P + F TY VQ G+V M +D C+V G+GTV +K+ G + TL+D Sbjct: 284 QWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIKMFDGCIRTLSD 343 Query: 189 VRHVPDLSNNLISCAMLEHDGYEGRWGKGVMKLMRGSMIIAKAE-KNRNLYVLHAKHDSY 365 VRH+P+L +LIS L+ GY+ G G++K+ +GS+++ KA+ K+ NLY L + Sbjct: 344 VRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVMKADIKSANLYHLQG---TT 400 Query: 366 VPNSVNAVATPVSN-DLTDLWHKRLGHISSKGLDILQNKGCFGKNKLDALSFCESCVYGK 542 + +V V+ +SN D T+LWH RLGH+S GL L +G + L FCE C++GK Sbjct: 401 ILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDGQSIGKLKFCEHCIFGK 460 Query: 543 HQRVKFPSPTNPKQSASTDLLEYLHADVWGPSSVPTHGGNRYFLSIIDDYSRKVWVVLMK 722 H+RVKF + T+ + +L+Y+H+D+WGP+ + GG RY ++I++DYSRKVW +K Sbjct: 461 HKRVKFNTSTHTTEG----ILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRKVWPYFLK 516 Query: 723 NKSDVFDKFKTWKTLIENQTGKRIKVLRTDNGLEFCNQLMDNLCDEFGIKR 875 +K F+ FK WKT++E QT +++K+LRTDNG+EFC+++ + C GI R Sbjct: 517 HKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSYCKSEGIMR 567