BLASTX nr result
ID: Rehmannia29_contig00035800
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00035800
(507 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011087782.1| mRNA turnover protein 4 homolog [Sesamum ind... 67 4e-10
ref|XP_022895584.1| mRNA turnover protein 4 homolog [Olea europa... 63 9e-09
gb|KVI10984.1| Ribosomal protein L10/acidic P0 [Cynara carduncul... 62 2e-08
ref|XP_016539140.1| PREDICTED: mRNA turnover protein 4 homolog [... 61 3e-08
emb|CDO97523.1| unnamed protein product [Coffea canephora] 61 3e-08
gb|PHT98555.1| hypothetical protein BC332_32463 [Capsicum chinense] 60 8e-08
gb|PHT62297.1| hypothetical protein T459_33871 [Capsicum annuum] 60 8e-08
ref|XP_012828399.1| PREDICTED: mRNA turnover protein 4 homolog [... 59 2e-07
ref|NP_001275260.1| mRNA turnover protein 4 homolog [Solanum tub... 59 3e-07
ref|XP_009791062.1| PREDICTED: mRNA turnover protein 4 homolog [... 59 3e-07
ref|XP_004230519.1| PREDICTED: mRNA turnover protein 4 homolog [... 59 3e-07
ref|XP_017244498.1| PREDICTED: mRNA turnover protein 4 homolog [... 58 4e-07
ref|XP_008347883.1| PREDICTED: mRNA turnover protein 4 homolog [... 57 5e-07
gb|OUZ99137.1| Ribosomal protein L10/acidic P0 [Macleaya cordata] 58 5e-07
ref|XP_019265809.1| PREDICTED: mRNA turnover protein 4 homolog [... 58 6e-07
ref|XP_022157470.1| mRNA turnover protein 4 homolog [Momordica c... 57 9e-07
ref|XP_015062669.1| PREDICTED: mRNA turnover protein 4 homolog [... 57 9e-07
ref|XP_008365277.1| PREDICTED: mRNA turnover protein 4 homolog [... 57 9e-07
gb|KGN62139.1| hypothetical protein Csa_2G302060 [Cucumis sativus] 57 9e-07
ref|XP_011649395.1| PREDICTED: mRNA turnover protein 4 homolog [... 57 1e-06
>ref|XP_011087782.1| mRNA turnover protein 4 homolog [Sesamum indicum]
Length = 229
Score = 66.6 bits (161), Expect = 4e-10
Identities = 36/54 (66%), Positives = 40/54 (74%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DEIRSGLHKISKLLRGDSGLCFTSLPKE+IQR LF + D+ R + A
Sbjct: 84 DEIRSGLHKISKLLRGDSGLCFTSLPKEEIQR-----LFDEYEDYDFARTGSTA 132
>ref|XP_022895584.1| mRNA turnover protein 4 homolog [Olea europaea var. sylvestris]
Length = 229
Score = 62.8 bits (151), Expect = 9e-09
Identities = 28/32 (87%), Positives = 31/32 (96%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISKLLRGDSGLCFTSLPKE+++R
Sbjct: 84 DEIRPGLHKISKLLRGDSGLCFTSLPKEEVER 115
>gb|KVI10984.1| Ribosomal protein L10/acidic P0 [Cynara cardunculus var. scolymus]
Length = 267
Score = 62.4 bits (150), Expect = 2e-08
Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFM--MHADWKSFRRSTRAFLIF 174
DEIR+GLHK++KLLRGDSGLC T++ KE+IQR L+ LF M+ W R + +
Sbjct: 84 DEIRTGLHKVAKLLRGDSGLCVTNMSKEEIQRLPLQSLFFTNMNCIWLFECSIFRLLVTY 143
Query: 175 LVTF 186
++T+
Sbjct: 144 IITY 147
>ref|XP_016539140.1| PREDICTED: mRNA turnover protein 4 homolog [Capsicum annuum]
Length = 229
Score = 61.2 bits (147), Expect = 3e-08
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DEIRSGLHKISKL+RGDSGLCFT+L KE++QR LF + ++ R T A
Sbjct: 84 DEIRSGLHKISKLVRGDSGLCFTNLSKEEVQR-----LFNQYEEYDFARTGTIA 132
>emb|CDO97523.1| unnamed protein product [Coffea canephora]
Length = 229
Score = 61.2 bits (147), Expect = 3e-08
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DE+R GLHKISKL+RGDSGLCFT+LPKE++QR LF + ++ R T A
Sbjct: 84 DELRPGLHKISKLVRGDSGLCFTNLPKEEVQR-----LFNEYEEYDFARTGTLA 132
>gb|PHT98555.1| hypothetical protein BC332_32463 [Capsicum chinense]
Length = 249
Score = 60.5 bits (145), Expect = 8e-08
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIRSGLHKISKL+RGDSGLCFT+L KE++QR
Sbjct: 59 DEIRSGLHKISKLVRGDSGLCFTNLSKEEVQR 90
>gb|PHT62297.1| hypothetical protein T459_33871 [Capsicum annuum]
Length = 249
Score = 60.5 bits (145), Expect = 8e-08
Identities = 27/32 (84%), Positives = 31/32 (96%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIRSGLHKISKL+RGDSGLCFT+L KE++QR
Sbjct: 59 DEIRSGLHKISKLVRGDSGLCFTNLSKEEVQR 90
>ref|XP_012828399.1| PREDICTED: mRNA turnover protein 4 homolog [Erythranthe guttata]
gb|EYU18540.1| hypothetical protein MIMGU_mgv1a013146mg [Erythranthe guttata]
Length = 229
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/54 (57%), Positives = 38/54 (70%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DEI+SGLHKISK+L GDSGLCFTSLPKE++ R LF + D+ R + A
Sbjct: 84 DEIKSGLHKISKVLHGDSGLCFTSLPKEEVIR-----LFGEYEDYDFARTGSTA 132
>ref|NP_001275260.1| mRNA turnover protein 4 homolog [Solanum tuberosum]
gb|ABA40425.1| unknown [Solanum tuberosum]
gb|AFW90616.1| putative ribosomal protein L1 [Solanum tuberosum]
Length = 229
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISKL+RGDSGLCFT+L KE++QR
Sbjct: 84 DEIRPGLHKISKLVRGDSGLCFTNLSKEEVQR 115
>ref|XP_009791062.1| PREDICTED: mRNA turnover protein 4 homolog [Nicotiana sylvestris]
ref|XP_016448777.1| PREDICTED: mRNA turnover protein 4 homolog [Nicotiana tabacum]
Length = 229
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISKL+RGDSGLCFT+L KE++QR
Sbjct: 84 DEIRPGLHKISKLVRGDSGLCFTNLSKEEVQR 115
>ref|XP_004230519.1| PREDICTED: mRNA turnover protein 4 homolog [Solanum lycopersicum]
Length = 229
Score = 58.5 bits (140), Expect = 3e-07
Identities = 26/32 (81%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISKL+RGDSGLCFT+L KE++QR
Sbjct: 84 DEIRPGLHKISKLVRGDSGLCFTNLSKEEVQR 115
>ref|XP_017244498.1| PREDICTED: mRNA turnover protein 4 homolog [Daucus carota subsp.
sativus]
gb|KZM98643.1| hypothetical protein DCAR_013995 [Daucus carota subsp. sativus]
Length = 229
Score = 58.2 bits (139), Expect = 4e-07
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLE 108
DEIR+GLHK+SKLLRGDSGLC T+LPKE++++ E
Sbjct: 84 DEIRTGLHKVSKLLRGDSGLCCTNLPKEEVEKIFSE 119
>ref|XP_008347883.1| PREDICTED: mRNA turnover protein 4 homolog [Malus domestica]
Length = 182
Score = 57.4 bits (137), Expect = 5e-07
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISK+L GD+GLCFT+LPKE+++R
Sbjct: 37 DEIRPGLHKISKVLHGDAGLCFTNLPKEEVER 68
>gb|OUZ99137.1| Ribosomal protein L10/acidic P0 [Macleaya cordata]
Length = 251
Score = 58.2 bits (139), Expect = 5e-07
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLE 108
DEIR G+HKISKLLRGD+G+CFT+ PKE+++R E
Sbjct: 106 DEIRPGIHKISKLLRGDAGICFTNFPKEEVERLFAE 141
>ref|XP_019265809.1| PREDICTED: mRNA turnover protein 4 homolog [Nicotiana attenuata]
gb|OIT35451.1| hypothetical protein A4A49_03416 [Nicotiana attenuata]
Length = 229
Score = 57.8 bits (138), Expect = 6e-07
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISKL+RGDSG+CFT+L KE++QR
Sbjct: 84 DEIRPGLHKISKLVRGDSGICFTNLSKEEVQR 115
>ref|XP_022157470.1| mRNA turnover protein 4 homolog [Momordica charantia]
Length = 229
Score = 57.4 bits (137), Expect = 9e-07
Identities = 29/54 (53%), Positives = 38/54 (70%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DEIR GLHKISKLL G++GLCFT+LPKE+++R LF + D+ R + A
Sbjct: 84 DEIRPGLHKISKLLHGNTGLCFTNLPKEEVER-----LFNEYEDYDYARTGSTA 132
>ref|XP_015062669.1| PREDICTED: mRNA turnover protein 4 homolog [Solanum pennellii]
Length = 229
Score = 57.4 bits (137), Expect = 9e-07
Identities = 25/32 (78%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKI+KL+RGDSGLCFT+L KE++QR
Sbjct: 84 DEIRPGLHKIAKLVRGDSGLCFTNLSKEEVQR 115
>ref|XP_008365277.1| PREDICTED: mRNA turnover protein 4 homolog [Malus domestica]
Length = 229
Score = 57.4 bits (137), Expect = 9e-07
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQR 96
DEIR GLHKISK+L GD+GLCFT+LPKE+++R
Sbjct: 84 DEIRPGLHKISKVLHGDAGLCFTNLPKEEVER 115
>gb|KGN62139.1| hypothetical protein Csa_2G302060 [Cucumis sativus]
Length = 207
Score = 57.0 bits (136), Expect = 9e-07
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DEIR GLHK+SKLL G++GLCFT+LPKE+++R LF + D+ R + A
Sbjct: 62 DEIRPGLHKVSKLLHGNTGLCFTNLPKEEVER-----LFNEYEDYDYARTGSAA 110
>ref|XP_011649395.1| PREDICTED: mRNA turnover protein 4 homolog [Cucumis sativus]
Length = 229
Score = 57.0 bits (136), Expect = 1e-06
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = +1
Query: 1 DEIRSGLHKISKLLRGDSGLCFTSLPKEDIQRYVLELLFMMHADWKSFRRSTRA 162
DEIR GLHK+SKLL G++GLCFT+LPKE+++R LF + D+ R + A
Sbjct: 84 DEIRPGLHKVSKLLHGNTGLCFTNLPKEEVER-----LFNEYEDYDYARTGSAA 132