BLASTX nr result
ID: Rehmannia29_contig00035768
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00035768
(581 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_024035651.1| uncharacterized protein LOC112096445 [Citrus... 265 2e-81
gb|PNY01861.1| retrotransposon-related protein, partial [Trifoli... 264 2e-79
ref|XP_024019766.1| uncharacterized protein LOC112091134 [Morus ... 234 3e-75
gb|OMO96556.1| reverse transcriptase [Corchorus capsularis] 250 2e-74
dbj|GAU27665.1| hypothetical protein TSUD_126110 [Trifolium subt... 251 9e-74
gb|OMO91168.1| reverse transcriptase [Corchorus capsularis] 250 1e-73
gb|KYP38538.1| Retrovirus-related Pol polyprotein from transposo... 240 4e-73
dbj|GAU45976.1| hypothetical protein TSUD_401160 [Trifolium subt... 249 4e-73
gb|OMO73136.1| reverse transcriptase [Corchorus capsularis] 246 5e-73
gb|AAO23078.1| polyprotein [Glycine max] 247 3e-72
gb|PNX54820.1| hypothetical protein L195_g048442, partial [Trifo... 231 5e-72
gb|KYP42436.1| Retrovirus-related Pol polyprotein from transposo... 231 5e-72
ref|XP_024038299.1| uncharacterized protein LOC112097344 [Citrus... 246 5e-72
gb|PNY17392.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 246 5e-72
dbj|GAU10138.1| hypothetical protein TSUD_421340 [Trifolium subt... 226 9e-72
gb|PNY16670.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 239 1e-71
gb|KYP39590.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 244 2e-71
gb|KYP39589.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan] 244 2e-71
gb|KYP49340.1| Retrotransposable element Tf2 [Cajanus cajan] 239 2e-71
dbj|GAU23504.1| hypothetical protein TSUD_39830 [Trifolium subte... 243 3e-71
>ref|XP_024035651.1| uncharacterized protein LOC112096445 [Citrus clementina]
Length = 726
Score = 265 bits (677), Expect = 2e-81
Identities = 125/193 (64%), Positives = 150/193 (77%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL VLECL +Q+FVK+SKC F Q+ I+YLGHIV+ V+ D +KI+AM+ WP P+
Sbjct: 523 HLRHLQQVLECLHFYQFFVKLSKCLFCQENIDYLGHIVSASSVRADPQKIDAMIHWPTPQ 582
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
KQLRGFLGLTGYYRRF++ YA+LAAPLT LLCKD F+W+ F LKK MVE PV
Sbjct: 583 TTKQLRGFLGLTGYYRRFIRGYASLAAPLTGLLCKDAFKWTPTTTATFDALKKPMVEAPV 642
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
LRLPDFE F++ETDAS GIGAVLMQ GHP+S+FSKKLG R++ +STYIKEL I EA+
Sbjct: 643 LRLPDFETDFILETDASNVGIGAVLMQSGHPISYFSKKLGPRLRASSTYIKELTVIVEAV 702
Query: 541 RKWRQYLLGREFV 579
KWRQYLLGR F+
Sbjct: 703 HKWRQYLLGRFFI 715
>gb|PNY01861.1| retrotransposon-related protein, partial [Trifolium pratense]
Length = 954
Score = 264 bits (674), Expect = 2e-79
Identities = 127/193 (65%), Positives = 154/193 (79%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL VL+CL H ++VK+SKC F Q++IEYLGHIV+ V D KIEAMV WP+P
Sbjct: 738 HVVHLEQVLKCLLTHCFYVKLSKCLFCQESIEYLGHIVSSQGVHADPGKIEAMVNWPQPN 797
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
VKQLRGFLGLTGYYRRF+ YA++AAPLT+LL + F+W+ A AFT LK+AMV PV
Sbjct: 798 TVKQLRGFLGLTGYYRRFIANYASIAAPLTDLLRHESFRWTDAATHAFTALKQAMVAAPV 857
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
LRLPDF F+IETDAS++GIGAVLMQ+GHP++FFSKKLG++MQ AS YIKEL+AITEA+
Sbjct: 858 LRLPDFSQEFIIETDASQFGIGAVLMQEGHPIAFFSKKLGLKMQGASVYIKELHAITEAV 917
Query: 541 RKWRQYLLGREFV 579
KWRQYLLG F+
Sbjct: 918 LKWRQYLLGHFFI 930
>ref|XP_024019766.1| uncharacterized protein LOC112091134 [Morus notabilis]
Length = 227
Score = 234 bits (598), Expect = 3e-75
Identities = 111/183 (60%), Positives = 140/183 (76%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL VL+ LR+HQ+FVK SKC+FGQ +IEYLGHIV+ V +D K++AM+EWP P
Sbjct: 45 HIRHLRQVLQVLREHQFFVKRSKCTFGQTSIEYLGHIVSNYGVSMDLAKVKAMLEWPVPN 104
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+K+LRGFLGLTGYYRRFV+ YAT+A+PLT+LL KD F W+ A AF K AM PV
Sbjct: 105 NLKELRGFLGLTGYYRRFVRSYATIASPLTDLLKKDTFAWTSVAQSAFDTFKAAMTSAPV 164
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LP+F FV+ETDAS +GIGAVL++ H +++FSKKL RMQ S Y++ELYAITEA+
Sbjct: 165 LALPNFVAEFVVETDASNFGIGAVLLKSDHHIAYFSKKLSPRMQHTSVYVRELYAITEAV 224
Query: 541 RKW 549
+KW
Sbjct: 225 KKW 227
>gb|OMO96556.1| reverse transcriptase [Corchorus capsularis]
Length = 963
Score = 250 bits (639), Expect = 2e-74
Identities = 117/192 (60%), Positives = 145/192 (75%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL +VL+ L+ +Q++ K SKC+FG+ +I+YLGHI+TG VKVD KIEA+V+WP P
Sbjct: 249 HLDHLSVVLDLLQTNQFYAKESKCTFGRSSIDYLGHIITGEGVKVDHSKIEAIVDWPTPS 308
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+K LRGFLGLTGYYR+FVK YA +AAPLTNLL KD F W + F LK A+ PV
Sbjct: 309 NLKALRGFLGLTGYYRKFVKGYAAIAAPLTNLLRKDQFLWDSTTSKTFQDLKLALTSTPV 368
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
LRLPDF F IE DAS +GAVL Q GHP+++FSKKL +MQ AS Y++E+YAITEA+
Sbjct: 369 LRLPDFASPFCIEADASNIAVGAVLSQGGHPIAYFSKKLSPQMQFASAYVREMYAITEAV 428
Query: 541 RKWRQYLLGREF 576
KWRQYLLGR F
Sbjct: 429 HKWRQYLLGRSF 440
>dbj|GAU27665.1| hypothetical protein TSUD_126110 [Trifolium subterraneum]
Length = 1402
Score = 251 bits (641), Expect = 9e-74
Identities = 118/193 (61%), Positives = 154/193 (79%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H EHLGLVL+CL+++QY +K SKCSF Q +I+YLGH+V+ V D +KI AM++WP+PK
Sbjct: 652 HVEHLGLVLQCLQENQYHLKQSKCSFAQTSIQYLGHVVSATGVGPDPEKISAMMDWPQPK 711
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
VKQLRGFLGLTG+YR+FV +YA++AAPLT LL KD F W+++A AF LK AM + PV
Sbjct: 712 TVKQLRGFLGLTGFYRKFVPKYASVAAPLTELLKKDAFCWNEQAQLAFDNLKLAMTKAPV 771
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF + FV+ETDAS G+GAVL+Q+GHP+ +FSK+ R+ ASTY++EL AIT A+
Sbjct: 772 LALPDFNEEFVLETDASGSGMGAVLIQRGHPLCYFSKQFCSRLLAASTYVRELCAITSAV 831
Query: 541 RKWRQYLLGREFV 579
+KWR YLLGR+FV
Sbjct: 832 KKWRTYLLGRKFV 844
>gb|OMO91168.1| reverse transcriptase [Corchorus capsularis]
Length = 1137
Score = 250 bits (638), Expect = 1e-73
Identities = 117/193 (60%), Positives = 150/193 (77%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H L VLE L H+YF K SKCSF + +I+YLGHI++ V+VD KI+A+ WP+P+
Sbjct: 688 HLIPLQKVLELLMTHKYFAKQSKCSFARPSIDYLGHIISASGVQVDPSKIKAITAWPQPR 747
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+K LRGFLGLTGYYR+FV+ YAT+AAPLTNLL + ++W++ A +AF LKKA+ P+
Sbjct: 748 NLKALRGFLGLTGYYRKFVRHYATIAAPLTNLLKANAYEWNEGATKAFELLKKALTSTPI 807
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDFE F + TDAS IGAVL Q+GHP++FFSKKL +RMQ +STYI+E+YAITEA+
Sbjct: 808 LALPDFEKHFEVSTDASNVAIGAVLAQEGHPIAFFSKKLSLRMQSSSTYIREMYAITEAV 867
Query: 541 RKWRQYLLGREFV 579
+KWRQYLLGR FV
Sbjct: 868 KKWRQYLLGRPFV 880
>gb|KYP38538.1| Retrovirus-related Pol polyprotein from transposon 297 family
[Cajanus cajan]
Length = 576
Score = 240 bits (612), Expect = 4e-73
Identities = 110/193 (56%), Positives = 148/193 (76%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL LVL+ LR H+ F +SKC F Q++I YLGH+V+ V+VD++KI+A++ WP P+
Sbjct: 359 HISHLTLVLDTLRTHKLFANLSKCEFCQESINYLGHVVSAQGVQVDTQKIDAVINWPLPQ 418
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+ QLRGFLGLTGYYR FVK YA++A PLT++L + F W+ ++QAF LK+A+ P
Sbjct: 419 NITQLRGFLGLTGYYRHFVKGYASIAWPLTDMLKHNSFHWTPTSEQAFLHLKEALTTTPT 478
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF +FVIETDAS GIGAVL QKGHP+++FSKKL +M ASTY++ELYA+T+A+
Sbjct: 479 LALPDFSVMFVIETDASNHGIGAVLTQKGHPLAYFSKKLSPKMAKASTYVRELYALTQAV 538
Query: 541 RKWRQYLLGREFV 579
+WR YLLG+ F+
Sbjct: 539 ARWRHYLLGKRFL 551
>dbj|GAU45976.1| hypothetical protein TSUD_401160 [Trifolium subterraneum]
Length = 1273
Score = 249 bits (636), Expect = 4e-73
Identities = 115/193 (59%), Positives = 149/193 (77%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL LV ECL HQ+F+KM+KC F QQ+I YLGHI++ V D +KI +M +WP P
Sbjct: 613 HLHHLKLVFECLLTHQFFLKMTKCQFAQQSISYLGHIISSCGVGPDPEKIASMTQWPSPA 672
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+KQLRGFLGLTG+YR+F+K YAT+A PLT LL KD F WS+ A +AF LK+AMVE PV
Sbjct: 673 NLKQLRGFLGLTGFYRKFIKNYATIAFPLTELLKKDAFAWSETAQEAFNALKQAMVEAPV 732
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LP+F + F+++TDAS+ G+GAVL Q GHP+ +FSKK ++ ASTY++EL AITEA+
Sbjct: 733 LALPNFNEPFMLDTDASRIGMGAVLSQGGHPICYFSKKFCSKLLRASTYVRELCAITEAV 792
Query: 541 RKWRQYLLGREFV 579
+KWR YLLGR+F+
Sbjct: 793 KKWRPYLLGRKFI 805
>gb|OMO73136.1| reverse transcriptase [Corchorus capsularis]
Length = 900
Score = 246 bits (627), Expect = 5e-73
Identities = 118/193 (61%), Positives = 142/193 (73%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H EHL +VL L H ++ K+SKC+FGQ +I+YLGH++ V VD KI A+ WP P
Sbjct: 253 HLEHLSIVLNLLAHHHFYAKLSKCTFGQTSIDYLGHMIGEQGVHVDPSKISAVTAWPIPT 312
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+K LRGFLGLTGYYR+FVK YA + APLTNLL KD FQWS E + +F LK A+ PV
Sbjct: 313 NLKTLRGFLGLTGYYRKFVKNYAHITAPLTNLLRKDSFQWSDETEASFQALKNALTTAPV 372
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF F IE DAS IGAVL Q GHPV+++SKKLG + Q+ASTY++ELYAITEAI
Sbjct: 373 LALPDFSLPFSIEADASNVAIGAVLAQAGHPVAYYSKKLGPQKQLASTYVRELYAITEAI 432
Query: 541 RKWRQYLLGREFV 579
KWRQYL+GR FV
Sbjct: 433 HKWRQYLIGRPFV 445
>gb|AAO23078.1| polyprotein [Glycine max]
Length = 1552
Score = 247 bits (630), Expect = 3e-72
Identities = 115/193 (59%), Positives = 148/193 (76%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL VL+ L++HQ F ++SKCSFG ++YLGH V+G V +++ K++A+++WP P
Sbjct: 763 HLKHLESVLQTLKQHQLFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPN 822
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
NVKQLRGFLGLTGYYRRF+K YA +A PLT+LL KD F W+ EA+ AF KLKKAM E PV
Sbjct: 823 NVKQLRGFLGLTGYYRRFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPV 882
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF F++ETDAS G+GAVL Q GHP+++FSKKL RMQ S Y +EL AITEA+
Sbjct: 883 LSLPDFSQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEAL 942
Query: 541 RKWRQYLLGREFV 579
K+R YLLG +F+
Sbjct: 943 SKFRHYLLGNKFI 955
>gb|PNX54820.1| hypothetical protein L195_g048442, partial [Trifolium pratense]
Length = 364
Score = 231 bits (589), Expect = 5e-72
Identities = 109/193 (56%), Positives = 148/193 (76%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +H+ LVL L+ + +VK+SKCSFG + IEYLGH+VTG V +D K++A++ WP P
Sbjct: 7 HLKHVELVLRVLQDNTLYVKLSKCSFGVREIEYLGHVVTGQGVSMDKDKVQAVLNWPTPV 66
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+KQLRGFLGLTGYYRRF++ YA +A+PLT+LL K+ + W+ +A+QAF +LK AM PV
Sbjct: 67 NIKQLRGFLGLTGYYRRFIQSYAKIASPLTDLLKKEAYVWNDKAEQAFQQLKVAMTTAPV 126
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LP+F+ F++ETDAS GIGAVL Q+GHP+++FSKKL +R Q S Y +E+ AI EAI
Sbjct: 127 LALPNFKLPFILETDASGIGIGAVLHQQGHPIAYFSKKLVLRDQKKSAYFREMLAIAEAI 186
Query: 541 RKWRQYLLGREFV 579
K+R YLLG +F+
Sbjct: 187 AKFRHYLLGHKFI 199
>gb|KYP42436.1| Retrovirus-related Pol polyprotein from transposon 297 family
[Cajanus cajan]
Length = 355
Score = 231 bits (588), Expect = 5e-72
Identities = 112/193 (58%), Positives = 141/193 (73%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL +VL+ L++H+ F K+SKCSFG Q ++YLGH V+G V +D K++A+++WP PK
Sbjct: 45 HLHHLEVVLQKLQQHKLFSKLSKCSFGLQQVDYLGHNVSGLGVAMDKSKVKAVLDWPCPK 104
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
N+KQLRGFLGLTGYYRRF+K+YA +AAPLTNLL KD F+W A +F LK + + PV
Sbjct: 105 NLKQLRGFLGLTGYYRRFIKQYAVVAAPLTNLLKKDNFKWDNSAHGSFAALKTTVTQAPV 164
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LP+F FV+E DAS GIG VL Q HP++FFSKKL MQ S Y +E YAITEAI
Sbjct: 165 LALPNFCKPFVLEMDASGVGIGVVLSQDHHPIAFFSKKLSASMQKQSAYTREFYAITEAI 224
Query: 541 RKWRQYLLGREFV 579
K+R YLLG FV
Sbjct: 225 AKFRHYLLGHRFV 237
>ref|XP_024038299.1| uncharacterized protein LOC112097344 [Citrus clementina]
Length = 1381
Score = 246 bits (628), Expect = 5e-72
Identities = 116/188 (61%), Positives = 148/188 (78%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H HL +L CL+ HQ+FVK+SKC F Q+ I+YLGHIV+ V+ D +KI+AMV WP P+
Sbjct: 723 HFRHLEQLLWCLQFHQFFVKLSKCLFCQELIDYLGHIVSASDVRADPQKIKAMVRWPPPQ 782
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
KQLRGFLGLTGYYRRF++ YA+L APLT+LLCKD F+ +Q +AF LK+AMV+ P+
Sbjct: 783 TTKQLRGFLGLTGYYRRFIRGYASLVAPLTDLLCKDAFKSTQATTEAFEALKRAMVKAPM 842
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
LRLP+F+ F++ETDAS GIGAVLMQ GHP+ +FSKKLG R++ +STY+KEL I EA+
Sbjct: 843 LRLPNFDSKFILETDASNVGIGAVLMQYGHPICYFSKKLGPRLRASSTYLKELTVIVEAV 902
Query: 541 RKWRQYLL 564
KWRQYLL
Sbjct: 903 YKWRQYLL 910
>gb|PNY17392.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1510
Score = 246 bits (628), Expect = 5e-72
Identities = 117/193 (60%), Positives = 148/193 (76%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H EHL +V +CL H++ +K SKCSF Q +I+YLGHIV+ V D KIEAMV WP P
Sbjct: 717 HLEHLKVVFQCLLTHEFCLKQSKCSFAQSSIDYLGHIVSAEGVGPDPTKIEAMVSWPVPS 776
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
NVKQLRGFLGLTG+YR+F+ +YA++AAPLT LL +D F W+ A QAF LK+AM E PV
Sbjct: 777 NVKQLRGFLGLTGFYRKFICKYASIAAPLTALLKRDAFIWTDAAQQAFDMLKRAMSEAPV 836
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LP+FED F++ETDAS G+GAVL+QKGHP+ +FSK+ RM +ASTY++EL AIT A+
Sbjct: 837 LSLPNFEDQFILETDASGMGMGAVLIQKGHPICYFSKQFCPRMLVASTYVRELCAITTAV 896
Query: 541 RKWRQYLLGREFV 579
+KWR YLLG F+
Sbjct: 897 KKWRTYLLGNTFI 909
>dbj|GAU10138.1| hypothetical protein TSUD_421340 [Trifolium subterraneum]
Length = 250
Score = 226 bits (577), Expect = 9e-72
Identities = 107/183 (58%), Positives = 139/183 (75%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL VL+ L+ H+ + ++SKC FG + ++YLGH V+G V ++S KI+A+++WP P
Sbjct: 68 HLQHLEAVLQTLQHHELYARLSKCFFGTREVDYLGHNVSGTCVSMESTKIQAVMDWPTPI 127
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
NVKQLRGFLGLTGYYRRF+K YA +A PLT LL KD FQW EA+ AF +LK+AMVE PV
Sbjct: 128 NVKQLRGFLGLTGYYRRFIKSYAHIAGPLTELLKKDSFQWHNEAEIAFNRLKQAMVEAPV 187
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF F++ETDAS G+GAVL Q GHP+++FSKKL RMQ S Y +EL AIT+A+
Sbjct: 188 LTLPDFTQPFILETDASGIGVGAVLGQNGHPIAYFSKKLAHRMQKQSAYTRELLAITKAL 247
Query: 541 RKW 549
K+
Sbjct: 248 PKF 250
>gb|PNY16670.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 752
Score = 239 bits (611), Expect = 1e-71
Identities = 114/193 (59%), Positives = 146/193 (75%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL VL+ L +H+ F K+SKCSFGQ+ ++YLGHIV+G V + ++KI+ ++ WP+P
Sbjct: 56 HLQHLEWVLQVLEQHELFAKLSKCSFGQREVDYLGHIVSGSGVYMHAEKIKDVLAWPKPS 115
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
NVKQLRGFLGLTGYYRRF+K YA +A PLT+LL KD F W+ EA+ AF LK+A+ PV
Sbjct: 116 NVKQLRGFLGLTGYYRRFIKAYAQIAGPLTDLLKKDAFVWNHEAENAFQNLKQAVTSAPV 175
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF F +ETDAS GIG VL Q+GHP+++FSKKL R Q S YI+EL AITEA+
Sbjct: 176 LGLPDFSKPFTLETDASGTGIGVVLGQQGHPITYFSKKLSPRRQKQSAYIRELLAITEAL 235
Query: 541 RKWRQYLLGREFV 579
K+R YLLG +FV
Sbjct: 236 AKFRHYLLGHKFV 248
>gb|KYP39590.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 1292
Score = 244 bits (624), Expect = 2e-71
Identities = 115/193 (59%), Positives = 146/193 (75%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL VL+ L KH+ + KMSKCSFG + +EYLGH+V+G V +++ K++A+++WP PK
Sbjct: 713 HLQHLQQVLDILAKHELYAKMSKCSFGLEQVEYLGHVVSGDGVSMETSKVQAVIDWPVPK 772
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
+KQLRGFLGLTGYYRRF++ YA++A PLT+LL KD F+WS EAD AF LK+A+ PV
Sbjct: 773 TIKQLRGFLGLTGYYRRFIQGYASIANPLTDLLKKDNFKWSNEADAAFIALKQAITTAPV 832
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF FV+ETDAS GIGAVL Q HP++FFSKKL RM S Y +E YAITEAI
Sbjct: 833 LSLPDFSQPFVLETDASGSGIGAVLSQNKHPIAFFSKKLSNRMTKQSAYTREFYAITEAI 892
Query: 541 RKWRQYLLGREFV 579
K+R YLLG F+
Sbjct: 893 AKFRHYLLGHRFI 905
>gb|KYP39589.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
Length = 1510
Score = 244 bits (624), Expect = 2e-71
Identities = 115/193 (59%), Positives = 146/193 (75%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL VL+ L KH+ + KMSKCSFG + +EYLGH+V+G V +++ K++A+++WP PK
Sbjct: 713 HLQHLQQVLDILAKHELYAKMSKCSFGLEQVEYLGHVVSGDGVSMETSKVQAVIDWPVPK 772
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
+KQLRGFLGLTGYYRRF++ YA++A PLT+LL KD F+WS EAD AF LK+A+ PV
Sbjct: 773 TIKQLRGFLGLTGYYRRFIQGYASIANPLTDLLKKDNFKWSNEADAAFIALKQAITTAPV 832
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF FV+ETDAS GIGAVL Q HP++FFSKKL RM S Y +E YAITEAI
Sbjct: 833 LSLPDFSQPFVLETDASGSGIGAVLSQNKHPIAFFSKKLSNRMTKQSAYTREFYAITEAI 892
Query: 541 RKWRQYLLGREFV 579
K+R YLLG F+
Sbjct: 893 AKFRHYLLGHRFI 905
>gb|KYP49340.1| Retrotransposable element Tf2 [Cajanus cajan]
Length = 734
Score = 239 bits (609), Expect = 2e-71
Identities = 115/193 (59%), Positives = 147/193 (76%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL V L + Q+F+K SKC F Q+ +EYLGHIV+ V+ D KI+AMVEWP P
Sbjct: 68 HLQHLDCVFLTLLQGQFFLKHSKCLFAQRQLEYLGHIVSSRGVEPDPSKIQAMVEWPVPT 127
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
++K LRGFLGLTG+YR+F++ YAT+A+PLT LL KD FQW+ EA AF LK+AM++ PV
Sbjct: 128 SIKALRGFLGLTGFYRKFIRGYATIASPLTALLRKDCFQWNPEAQSAFETLKQAMIDAPV 187
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LPDF F +ETDAS +GAVLMQ+GHPV+FFSK+ ++Q ASTY++EL+AIT A+
Sbjct: 188 LTLPDFSIPFTLETDASGLAMGAVLMQQGHPVAFFSKQFCPKLQHASTYVRELHAITTAV 247
Query: 541 RKWRQYLLGREFV 579
RKWRQYLLG FV
Sbjct: 248 RKWRQYLLGHSFV 260
>dbj|GAU23504.1| hypothetical protein TSUD_39830 [Trifolium subterraneum]
Length = 1160
Score = 243 bits (621), Expect = 3e-71
Identities = 113/192 (58%), Positives = 145/192 (75%)
Frame = +1
Query: 1 HAEHLGLVLECLRKHQYFVKMSKCSFGQQAIEYLGHIVTGGVVKVDSKKIEAMVEWPEPK 180
H +HL VL+ L+ H FVK+SKCSFG + ++YLGH V+G V +D K++ +++WP+P
Sbjct: 454 HLQHLETVLQILQHHTLFVKLSKCSFGMKEVDYLGHTVSGSGVAMDKLKVQTVLDWPKPT 513
Query: 181 NVKQLRGFLGLTGYYRRFVKEYATLAAPLTNLLCKDGFQWSQEADQAFTKLKKAMVEVPV 360
NVKQLRGFLGLTGYYRRF+K YAT+A PLTNLL K+ F+W+ A+QAF+ LK A+ PV
Sbjct: 514 NVKQLRGFLGLTGYYRRFIKSYATIATPLTNLLKKEAFEWNSNAEQAFSHLKSAITSAPV 573
Query: 361 LRLPDFEDIFVIETDASKWGIGAVLMQKGHPVSFFSKKLGVRMQMASTYIKELYAITEAI 540
L LP F F +ETDAS G+GAVL Q GHP++FFSKK+ RMQ S Y +EL+AITEAI
Sbjct: 574 LALPQFNQPFTLETDASGTGVGAVLSQGGHPIAFFSKKMVPRMQKQSAYTRELFAITEAI 633
Query: 541 RKWRQYLLGREF 576
K+R YLLG +F
Sbjct: 634 AKFRHYLLGHKF 645