BLASTX nr result

ID: Rehmannia29_contig00035484 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00035484
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KNA12524.1| hypothetical protein SOVF_125140 [Spinacia oleracea]    57   3e-06
ref|XP_021847038.1| RNA-dependent RNA polymerase 6 [Spinacia ole...    57   3e-06
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]    56   8e-06

>gb|KNA12524.1| hypothetical protein SOVF_125140 [Spinacia oleracea]
          Length = 1093

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = -1

Query: 82  MQDIIEFFTKNMVNESLGTICNAHVVH 2
           +QDII+FFTKNMVNESLGTICNAHVVH
Sbjct: 794 VQDIIDFFTKNMVNESLGTICNAHVVH 820


>ref|XP_021847038.1| RNA-dependent RNA polymerase 6 [Spinacia oleracea]
          Length = 1208

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/27 (92%), Positives = 27/27 (100%)
 Frame = -1

Query: 82  MQDIIEFFTKNMVNESLGTICNAHVVH 2
           +QDII+FFTKNMVNESLGTICNAHVVH
Sbjct: 909 VQDIIDFFTKNMVNESLGTICNAHVVH 935


>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/25 (100%), Positives = 25/25 (100%)
 Frame = -1

Query: 76  DIIEFFTKNMVNESLGTICNAHVVH 2
           DIIEFFTKNMVNESLGTICNAHVVH
Sbjct: 906 DIIEFFTKNMVNESLGTICNAHVVH 930


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