BLASTX nr result

ID: Rehmannia29_contig00035229 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00035229
         (442 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN02523.1| hypothetical protein CDL12_24961 [Handroanthus im...    39   3e-06

>gb|PIN02523.1| hypothetical protein CDL12_24961 [Handroanthus impetiginosus]
          Length = 380

 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -1

Query: 301 SILSEDSLESLRVNAGTPSTYHLRLPGPDDSPHVPPAGHATFFMDQ 164
           S+  E  LESLR     P  + + +P P+ S   PP GH  FF++Q
Sbjct: 3   SLFGEGDLESLRTMYFVPPKFKVIIPSPNHSSDRPPKGHLYFFLEQ 48



 Score = 39.3 bits (90), Expect(2) = 3e-06
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = -3

Query: 182 HLFYGPEAC---LRFPVPDFLCQISRSFGISLSQIVPNPIRLLVSFYIIVTHFKEEPNCQ 12
           HL++  E     LRF V     +ISR FGI L Q  PN I+++V + I+  +   EP+ +
Sbjct: 41  HLYFFLEQLKLGLRFSVLPLYAEISRVFGIPLFQFTPNSIKMMVGYAILCRNLGLEPSAR 100


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