BLASTX nr result

ID: Rehmannia29_contig00035151 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00035151
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN26641.1| hypothetical protein CDL12_00621 [Handroanthus im...    53   9e-06

>gb|PIN26641.1| hypothetical protein CDL12_00621 [Handroanthus impetiginosus]
          Length = 137

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 47/136 (34%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
 Frame = +1

Query: 76  MGFKGNIVILM-MVIFCLCVPH----LGQILPSDNLQENIKHKAFDVNLRNKYGGGNKIG 240
           MG K  +VIL+ M  FCLC P        IL  D+LQ N+KHKA     R  +  G + G
Sbjct: 1   MGIKEKLVILLVMAFFCLCAPASLNPFEDILHLDHLQGNMKHKAIAHLNRFGHASGGR-G 59

Query: 241 HVSGGSRAAAVCVNNPSGGGLQEGSKSMPLYXXXXXXXXXXXXXXXXXXXXXXXXXYSCM 420
           H S G  + A   ++ +GGG    S  +PLY                         YSC+
Sbjct: 60  HASSGGWSVAGHGDDSNGGG---RSAMIPLY-AAAAGGAANKHNGNPHKHSGSSSNYSCV 115

Query: 421 GFV-TFALTILASLLL 465
           G + TFAL I   L+L
Sbjct: 116 GLILTFALAISTCLVL 131


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