BLASTX nr result

ID: Rehmannia29_contig00035087 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00035087
         (701 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14369.1| unnamed protein product [Coffea canephora]             68   1e-09
emb|CDP14440.1| unnamed protein product [Coffea canephora]             62   4e-08
ref|XP_013595190.1| PREDICTED: uncharacterized protein LOC106303...    57   9e-06

>emb|CDP14369.1| unnamed protein product [Coffea canephora]
          Length = 347

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 57/213 (26%), Positives = 89/213 (41%), Gaps = 6/213 (2%)
 Frame = -2

Query: 697 LWKTRNTWIFQNTRWKEIDVVNRALHDWQEFDIAAGTKIGGAKKETSAKENM------EA 536
           +WK+RN   F++     + VVN+A  +W+EF  A     G     T+ KE +      E 
Sbjct: 128 IWKSRNRRQFEDKGMDPMTVVNKATREWREFQEAQDVDGGNGSHTTNGKEGLGGWREPEV 187

Query: 535 RTVDTRSVGHYLVVLSAVKVGSNKSGWGGWIRAEKEGITRAWATSRDEVYHPVEATLVGI 356
             V   S        +AV+  + ++GWG   R        AWA          +   + +
Sbjct: 188 GWVKINSD-------AAVQQKAERAGWGMIARDCLGNALGAWAVPDTCCSSAKQEEALAL 240

Query: 355 RQALCFAEKSKARTLTIQIENRSLVQSLNSKAAFDSKCEKIAEDICLLSSLFDSVVYANQ 176
           R A+  A++   R +  + + + L+ S+NS    DS    I  DI  L S F    ++  
Sbjct: 241 RSAMLMAKQQGWRRVVFESDCKQLIDSINSGDG-DSDIATILLDIVSLKSNFYKCCFSFT 299

Query: 175 DHKNLSSCNRLVSLALSSDCDLDWCNQFSNWLV 77
              N S  + L  LALS D   +W   F  WL+
Sbjct: 300 RRMNNSVSHSLAKLALSLDGPAEWKVVFPAWLL 332


>emb|CDP14440.1| unnamed protein product [Coffea canephora]
          Length = 228

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 1/199 (0%)
 Frame = -2

Query: 697 LWKTRNTWIFQNTRWKEIDVVNRALHDWQEFDIAAGTKIGGAKKETSAKENMEARTVDTR 518
           +WK+RN  IF + +   + V  +A  +W+E+  A   +I  +  +T  +E +  R     
Sbjct: 25  IWKSRNARIFNSAQQHPLKVSEKAAQEWKEYQEAFQQRIRKSTTDTRRQEEINRREQTCS 84

Query: 517 SVGHYLVVLSAVKVGSNKSGWG-GWIRAEKEGITRAWATSRDEVYHPVEATLVGIRQALC 341
            V    +     ++G+N  G G        +GI  AW+    +  +  +     +R  + 
Sbjct: 85  EVVTQKLATQH-QIGNNSFGIGITAANGASQGIA-AWSLKERQAGNKAQDNAEAVRLCMI 142

Query: 340 FAEKSKARTLTIQIENRSLVQSLNSKAAFDSKCEKIAEDICLLSSLFDSVVYANQDHKNL 161
            A     R + I+IE+R L+  + +      +   I EDI  ++S F    +   +    
Sbjct: 143 KAATKGWRDIKIRIEDRKLLDQIRAGKVRSLELATIIEDIQKMTSWFRMCFFDRLNEDID 202

Query: 160 SSCNRLVSLALSSDCDLDW 104
           S C  L  +AL + CD++W
Sbjct: 203 SMCYSLSKIALLNFCDMEW 221


>ref|XP_013595190.1| PREDICTED: uncharacterized protein LOC106303478 [Brassica oleracea
           var. oleracea]
          Length = 514

 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
 Frame = -2

Query: 697 LWKTRNTWIFQNTRWKEIDVVNRAL---HDWQEFDIAAGTKIGGAKKETSAK-----ENM 542
           LW  RN  +F++  + E ++V RAL    +WQ   + AG++   + K++S K        
Sbjct: 312 LWTNRNKLLFEDKSFNESELVTRALVLAREWQSTSLPAGSQ-SDSPKDSSHKPFVLPSGF 370

Query: 541 EARTVDTRSVGHYLVVLSAVKVGSNKSGWGGWIRAEKEGIT-RAWATSRDEVYHPVEATL 365
           E  + DT    HY V   A     + +G  GWI  +  G+T R   +SR  V   + A  
Sbjct: 371 EEASSDTI---HYYV--DAAWNSGSAAGGFGWICYDHAGLTLRQGTSSRRYVASALVAEA 425

Query: 364 VGIRQALCFAEKSKARTLTIQIENRSLVQSLNSKAAFDSKCEKIAEDICLLSSLFDSVVY 185
           + ++ AL  A  +  + L    +++SLV  L+ K++  ++ ++I  DI LLS    SV +
Sbjct: 426 LALKSALSDAVNAGVKDLICFSDSKSLVALLSGKSSV-TELQRIISDISLLSLSLWSVTF 484


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