BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia29_contig00035085
         (816 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_817244.1| ORF45d [Pinus koraiensis] >gi|29469761|gb|AAO74...    60   1e-08
ref|YP_001152161.1| ORF49g [Pinus koraiensis] >gi|145048790|gb|A...    60   2e-08
gb|KMS96934.1| hypothetical protein BVRB_7g180160 [Beta vulgaris...    55   1e-06

>ref|NP_817244.1| ORF45d [Pinus koraiensis]
 gb|AAO74089.1| ORF45d (chloroplast) [Pinus koraiensis]
          Length = 45

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -1

Query: 717 LTMCQEPDLNW*HEDFQSSALPAELSRPFPM*YP 616
           LT CQEPDLNW HEDFQSSALP ELSR FP+ +P
Sbjct: 8   LTSCQEPDLNWWHEDFQSSALPTELSRLFPVDHP 41


>ref|YP_001152161.1| ORF49g [Pinus koraiensis]
 gb|ABP35408.1| ORF49g (chloroplast) [Pinus koraiensis]
          Length = 49

 Score = 59.7 bits (143), Expect = 2e-08
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = +3

Query: 177 DENKDRVPFYMSISTTMKFLVRGKSVDFKNREGSSPSIP 293
           DE+KDRV FYMS+STTM+  V GKSV F +REGSSPSIP
Sbjct: 3   DEDKDRVQFYMSMSTTMQIAVGGKSVGFIDREGSSPSIP 41


>gb|KMS96934.1| hypothetical protein BVRB_7g180160 [Beta vulgaris subsp. vulgaris]
          Length = 36

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 207 MSISTTMKFLVRGKSVDFKNREGSSPSIPK 296
           MSI TTMKF+VRG+SVDFKNREGSSPSI K
Sbjct: 1   MSILTTMKFIVRGRSVDFKNREGSSPSISK 30