BLASTX nr result
ID: Rehmannia29_contig00034933
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia29_contig00034933
(1903 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020963827.1| uncharacterized protein LOC107611884 [Arachi... 192 1e-47
ref|XP_010218741.1| PREDICTED: LOW QUALITY PROTEIN: KRAB-A domai... 183 5e-45
gb|ABC94893.1| polyprotein [Oryza australiensis] 183 6e-45
gb|AAV43999.1| putative polyprotein [Oryza sativa Japonica Group] 183 6e-45
gb|AAL77161.1|AC091732_12 Putative polyprotein [Oryza sativa Jap... 183 6e-45
gb|ABB47435.2| retrotransposon protein, putative, Ty3-gypsy subc... 183 6e-45
gb|AAT93968.1| putative polyprotein [Oryza sativa Japonica Group... 182 2e-44
gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subc... 181 3e-44
gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japo... 181 3e-44
emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group] 181 3e-44
gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subc... 181 3e-44
gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japoni... 181 3e-44
emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group] >g... 181 3e-44
gb|AAT69667.1| putative polyprotein [Oryza sativa Japonica Group] 181 4e-44
gb|AAV31367.1| putative polyprotein [Oryza sativa Japonica Group] 181 4e-44
gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-... 181 4e-44
dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Grou... 181 5e-44
gb|ABA96940.1| retrotransposon protein, putative, Ty3-gypsy subc... 180 5e-44
gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subc... 180 6e-44
gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group] 179 1e-43
>ref|XP_020963827.1| uncharacterized protein LOC107611884 [Arachis ipaensis]
Length = 2309
Score = 192 bits (487), Expect = 1e-47
Identities = 110/256 (42%), Positives = 152/256 (59%), Gaps = 7/256 (2%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA++FALK WRHYLYG I+TDHKSLKY+F QKDLNLR RRWME ++D L P
Sbjct: 771 MAAVIFALKIWRHYLYGETCEIYTDHKSLKYIFQQKDLNLRQRRWMELLKDYDCTILYHP 830
Query: 762 *EGKCSGTCLQQK--GQCSHADNYGMEIPTGVECMESD----ENGHSN-FMCQYLGEA*I 604
+ L +K G +H I V +E+ + G S F+ ++ +
Sbjct: 831 GKANVVADALSRKSMGSLAHITLARRPIVEEVHQLEAGGIQFDIGESGVFLAHVRAQSSL 890
Query: 603 AK*G*NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQ 424
+ + PK+ +L+E V G +FS+ + +LR ++C ++ L+ IL EA
Sbjct: 891 IEQIKAAQRDDPKLRKLIEDVRNGRNSKFSL-DQDVLRCGQRLCVPDNHDLKKAILEEAH 949
Query: 423 QHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQI 244
+S+Y++HPG NKM++DLKQ FWW MKK + CLTCQ+VK EHQRP+GLL ++I
Sbjct: 950 -NSKYTVHPGSNKMYQDLKQLFWWEGMKKDIGIFVSHCLTCQQVKAEHQRPAGLLQQIEI 1008
Query: 243 PERKWEFITMDFSNGL 196
PE KWE ITMDF GL
Sbjct: 1009 PEWKWERITMDFVTGL 1024
Score = 158 bits (399), Expect = 2e-36
Identities = 128/326 (39%), Positives = 169/326 (51%), Gaps = 32/326 (9%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VL++L+D KLYAK SKCEFWL+ VTFLGH VS GI VDP KV V +W +P T T + S
Sbjct: 605 VLQTLRDHKLYAKFSKCEFWLDQVTFLGHVVSKDGIMVDPKKVEAVQKWPRPTTVTEIRS 664
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKRSR------- 1098
FLGLVGYYRRFIK+FS+I PL + +Q V+ Q+S A E + + +
Sbjct: 665 FLGLVGYYRRFIKNFSRISAPL---TKLTQKNVK----FQWSEACEESFQTLKTCLTSAP 717
Query: 1097 ----PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLE---- 942
PS S C GLG VLMQ GRVIA+ASR+LK +E NY TH+LE
Sbjct: 718 VLVLPSGSGRFSVFCD---ASRIGLGCVLMQHGRVIAYASRQLKKHEQNYPTHDLEMAAV 774
Query: 941 ---LRQWCLH*RSGDT--IYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSE-LKT 789
L+ W H G+T IYT+ L F Q R+ W E LK
Sbjct: 775 IFALKIW-RHYLYGETCEIYTDHKSLKYIFQQKDLNL------------RQRRWMELLKD 821
Query: 788 NHFDI*YHHRKANVVAHAFSRKA--SVATLIIMEWKSLQELSVWNPMRT-----DTQILC 630
I YH KANVVA A SRK+ S+A + + ++E+ ++ +
Sbjct: 822 YDCTILYHPGKANVVADALSRKSMGSLAHITLARRPIVEEVHQLEAGGIQFDIGESGVFL 881
Query: 629 VNISVRHELLSEVKTSQERDPKFGDL 552
++ + L+ ++K +Q DPK L
Sbjct: 882 AHVRAQSSLIEQIKAAQRDDPKLRKL 907
>ref|XP_010218741.1| PREDICTED: LOW QUALITY PROTEIN: KRAB-A domain-containing protein 2,
partial [Tinamus guttatus]
Length = 1109
Score = 183 bits (465), Expect = 5e-45
Identities = 128/330 (38%), Positives = 168/330 (50%), Gaps = 24/330 (7%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK RHY+ G IFTDHKSLKY+F+QK+LNLR RRW+E I+D L P
Sbjct: 525 LAAVVHALKIXRHYMIGNKCKIFTDHKSLKYIFTQKELNLRQRRWLELIKDYDLEIQYHP 584
Query: 762 *EGKCSGTCLQQKGQCSHADNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G*NV 583
+ L +KGQ ++ + M E ME G N M EA + + +
Sbjct: 585 GKANVVADALSRKGQVNNITTHLMSQELCWE-MEQLNLGMLNNM-----EATVMEVESTL 638
Query: 582 TGERPKIWRLVEKVLK-------GDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQ 424
E K EK+ + G +F+ E + FK ++C E LR IL EA
Sbjct: 639 EEEIRKGQESDEKIKEIKTLFGLGKAPDFTEDEQGTIWFKKRICVPEIEHLRQLILREAH 698
Query: 423 QHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQI 244
S YSIHPG KM++DLK+ +WW +K+ A C CQRVK EHQRP+GLL PL++
Sbjct: 699 D-SAYSIHPGSTKMYQDLKEKYWWYGLKRDVATHVALCDVCQRVKAEHQRPAGLLQPLKV 757
Query: 243 PERKWEFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDC 106
PE KWE I+MDF GL T K+ H + +K T S +LA +LY
Sbjct: 758 PEWKWEEISMDFIVGLPRTRDGYDSIWVIVDRLTKVAHFIPVKTTYSGAQLA-ELYMSRI 816
Query: 105 TAARSTSRQCFRQRLVQ---RFWKCLHEKM 25
++ R Q RFWK LHE M
Sbjct: 817 VCLHGVPKKIVSDRGTQFTSRFWKRLHESM 846
Score = 146 bits (369), Expect = 7e-33
Identities = 115/314 (36%), Positives = 156/314 (49%), Gaps = 8/314 (2%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VL+ L+D +LYAK SKC+FWL+ V FLGH V+ GI VDP K+ ++++WKQP+ A+ + S
Sbjct: 359 VLQKLRDNQLYAKFSKCDFWLKEVAFLGHIVTDGGIKVDPGKISEILDWKQPKDASKIRS 418
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQ----IRVEQ*V*VQFSRAEETTHKRSRPSS 1089
FLGL GYYRRFI+ FSK++ PL LE + Q + + T P
Sbjct: 419 FLGLAGYYRRFIEGFSKLVKPLTSLLEKGKEFKWDEACQNCFEELKKRLTTAPILVMPDI 478
Query: 1088 SEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLELRQWCLH*RSG 909
+ C GLG VLMQEG+VIA+ASR+L+ +E NY TH+LEL +H
Sbjct: 479 HKGFDVYCD---ASHLGLGCVLMQEGKVIAYASRQLRKHEKNYPTHDLELAA-VVHALKI 534
Query: 908 DTIYTEQHLLFSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHFDI*YHHRKANVVAHAF 732
Y + T R+ W EL K +I YH KANVVA A
Sbjct: 535 XRHYMIGNKCKIFTDHKSLKYIFTQKELNLRQRRWLELIKDYDLEIQYHPGKANVVADAL 594
Query: 731 SRKASV--ATLIIMEWKSLQELSVWNPMRTDTQILCVNISVRHELLSEVKTSQERDPKFG 558
SRK V T +M + E+ N + V + V L E++ QE D K
Sbjct: 595 SRKGQVNNITTHLMSQELCWEMEQLNLGMLNNMEATV-MEVESTLEEEIRKGQESDEKIK 653
Query: 557 DLWKKF*REMAKNF 516
++ F A +F
Sbjct: 654 EIKTLFGLGKAPDF 667
>gb|ABC94893.1| polyprotein [Oryza australiensis]
Length = 1469
Score = 183 bits (465), Expect = 6e-45
Identities = 126/342 (36%), Positives = 165/342 (48%), Gaps = 33/342 (9%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY F+Q DLNLR RRW+E I+D L P
Sbjct: 880 LAAVVHALKIWRHYLIGNHCDVYTDHKSLKYFFTQPDLNLRQRRWLELIKDYDLGIHYHP 939
Query: 762 *EGKCSGTCLQQKGQCSH--ADNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K QC+H N E+ +E N GE
Sbjct: 940 GKANVVADALSRKAQCNHMGLGNMASEL--------QEEMAKLNLHLIPHGEV------- 984
Query: 588 NVTGERPKIWRLVEKVLKGD--------------GQEFSVAEYRILRFKNQVCATNDEVL 451
N RP + +E+ +G+ QEFSV + IL +K ++C L
Sbjct: 985 NSLEVRPLLRTQIEEAQRGNEETQEIKERMAAGRAQEFSVDDKGILWYKKRICVPERGGL 1044
Query: 450 RNKILGEAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRP 271
R IL EA + S YS+HPG KM++DLK +WW NMK+ A C CQRVK EHQRP
Sbjct: 1045 RELILKEAHE-SAYSLHPGSTKMYQDLKGEYWWPNMKRDVAEYVAVCDVCQRVKAEHQRP 1103
Query: 270 SGLL*PLQIPERKWEFITMDFSNGLA*T--------------HKITHSLSIKKTDSLQKL 133
+GLL PL+IPE KW+ I MDF GL T K +++K + KL
Sbjct: 1104 AGLLQPLKIPEWKWDEIGMDFIVGLPKTATGYDSIWVIVDRLTKTARFITVKTNYNSAKL 1163
Query: 132 AIDLYPRDCTAARSTSRQCFRQRLVQ---RFWKCLHEKMG*H 16
A +LY ++ R Q FW +HE +G H
Sbjct: 1164 A-ELYMSRIVCLHGVPKRIISDRGTQFTSHFWSKVHEALGSH 1204
Score = 143 bits (361), Expect = 8e-32
Identities = 107/257 (41%), Positives = 139/257 (54%), Gaps = 19/257 (7%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKCEFWL+ V FLGH VS G+ VDP+KV V+EWK P++ T V S
Sbjct: 714 VLEKLREHRLYAKFSKCEFWLKEVAFLGHVVSAGGVAVDPAKVEAVMEWKAPKSVTEVRS 773
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVE-----Q*V*VQFSRAEETTHKRSRPS 1092
FLGL GYYRRFI+ FS + P + L + + E Q Q T + P
Sbjct: 774 FLGLAGYYRRFIEGFSTVARP-MTQLLKKEKKFEWNEKCQKAFDQLKEKLTTAPILTLPD 832
Query: 1091 SSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLE-------LRQ 933
+ + C +GLG VLMQ+G+V+A+ASR+L+P+E NY TH+LE L+
Sbjct: 833 NRKDFVMYCD---ASRQGLGGVLMQDGKVVAYASRQLRPHEENYPTHDLELAAVVHALKI 889
Query: 932 WCLH*RSGD--TIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHFDI* 771
W H G+ +YT+ L F+Q R+ W EL K I
Sbjct: 890 W-RHYLIGNHCDVYTDHKSLKYFFTQPDLNL------------RQRRWLELIKDYDLGIH 936
Query: 770 YHHRKANVVAHAFSRKA 720
YH KANVVA A SRKA
Sbjct: 937 YHPGKANVVADALSRKA 953
>gb|AAV43999.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1092
Score = 183 bits (464), Expect = 6e-45
Identities = 119/326 (36%), Positives = 165/326 (50%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 687 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQSDLNLRQRRWLELIKDYDVGIHYHP 746
Query: 762 *EGKCSGTCLQQKGQCSHADNYGM--EIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ D G+ E+ +E + G F+ + +
Sbjct: 747 GKANMVADALSRKSHCNTLDVRGIPPELNQQMEALNLSIVGRG-FLATLEAKPTLLDQIR 805
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P + L++ + +G F+ E+R L N+VC +D L+ IL EA + S Y
Sbjct: 806 EAQKNDPDMRGLLKNMKQGKAAGFTEDEHRTLWNGNRVCVPDDRELKQLILQEAHE-SPY 864
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM+ DLK +WWV+MK+ A C CQRVK EHQRP+GLL PLQ+PE KW
Sbjct: 865 SIHPGSTKMYLDLKGKYWWVSMKREIAEFVALCDVCQRVKAEHQRPAGLLQPLQVPEWKW 924
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
+ I MDF GL T K+ + +K T KLA +LY +
Sbjct: 925 DEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFILVKTTYGGNKLA-ELYFARIVSLHG 983
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R WK L E++G
Sbjct: 984 VPKKIVSDRGSQFTSHIWKKLQEELG 1009
Score = 150 bits (378), Expect = 5e-34
Identities = 114/321 (35%), Positives = 162/321 (50%), Gaps = 20/321 (6%)
Frame = -3
Query: 1418 QDKLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGSFLGLVG 1239
+ +LYAK SKCEFWL V FLGH +S KG+ VDP V V +W+QP+T T + SFLGL G
Sbjct: 527 EHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWRQPKTVTQIRSFLGLAG 586
Query: 1238 YYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKRSRPSS----SEWK*R 1071
YYRRFI++FSKI P+ L+ + V Q +A +T ++ S + +
Sbjct: 587 YYRRFIENFSKIARPMTQLLKKEEKFVWS---PQCEKAFQTLKEKLVSSPVLILPDTRKD 643
Query: 1070 LCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL----------RQWCLH 921
+GLG VLMQEG V+A+ASR+L+P+E NY TH+LEL R + +
Sbjct: 644 FMVYCDASRQGLGCVLMQEGHVVAYASRQLRPHEGNYPTHDLELAAVVHALKIWRHYLIG 703
Query: 920 *RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHFDI*YHHRKA 753
R +YT+ L F+Q+ R+ W EL K I YH KA
Sbjct: 704 NRC--EVYTDHKSLKYIFTQSDLNL------------RQRRWLELIKDYDVGIHYHPGKA 749
Query: 752 NVVAHAFSRKASVATLII--MEWKSLQELSVWNPMRTDTQILCVNISVRHELLSEVKTSQ 579
N+VA A SRK+ TL + + + Q++ N L + + LL +++ +Q
Sbjct: 750 NMVADALSRKSHCNTLDVRGIPPELNQQMEALNLSIVGRGFL-ATLEAKPTLLDQIREAQ 808
Query: 578 ERDPKFGDLWKKF*REMAKNF 516
+ DP L K + A F
Sbjct: 809 KNDPDMRGLLKNMKQGKAAGF 829
>gb|AAL77161.1|AC091732_12 Putative polyprotein [Oryza sativa Japonica Group]
Length = 1731
Score = 183 bits (465), Expect = 6e-45
Identities = 120/332 (36%), Positives = 169/332 (50%), Gaps = 25/332 (7%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G I+TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 1133 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHP 1192
Query: 762 *EGKCSGTCLQQKGQCSHADNYGMEIPTGVECME-SDENGHSN-------FMCQYLGEA* 607
+ L +K C+ GM C E E GH N F+
Sbjct: 1193 GKANVVADALSRKSYCTALCIEGM-------CEELRQEFGHLNVGIVEHGFVAALEARPT 1245
Query: 606 IAK*G*NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEA 427
+ P+I L + + G ++F E+ + ++C +D+ L++ IL EA
Sbjct: 1246 LVDQVRAAQVNDPEIAELKKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEA 1305
Query: 426 QQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQ 247
Q ++YSIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQ
Sbjct: 1306 HQ-TQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQ 1364
Query: 246 IPERKWEFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRD 109
IPE KWE I MDF GL T K+ H + + T + ++L ++LY
Sbjct: 1365 IPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRL-VELYLAR 1423
Query: 108 CTAARSTSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1424 IMCLHGVPKKIVSDRGSQFTSKFWQKLQEELG 1455
Score = 144 bits (364), Expect = 4e-32
Identities = 117/333 (35%), Positives = 167/333 (50%), Gaps = 24/333 (7%)
Frame = -3
Query: 1439 NFVLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVV 1263
+ VLE L++ +LYAK +KC+FWL V FLGH ++ +G+ VDPS V V +W P+T + +
Sbjct: 965 HLVLEKLKEHQLYAKFNKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQI 1024
Query: 1262 GSFLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR------- 1104
SFLGL GYYRRFI++FS+I P+ L+ + + ++ E K+
Sbjct: 1025 RSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWT---AECDKSFEELKKKLVSAPVL 1081
Query: 1103 SRPSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL----- 939
P ++ C GLG VLMQEGRV+A+ASR+L+P+E NY TH+LEL
Sbjct: 1082 ILPDPTKDFQVYCD---ASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVH 1138
Query: 938 -----RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTN 786
R + + R IYT+ L F+Q R+ W EL K
Sbjct: 1139 ALKIWRHYLIGNRC--EIYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDY 1184
Query: 785 HFDI*YHHRKANVVAHAFSRKASVATLII--MEWKSLQELSVWNPMRTDTQILCVNISVR 612
I YH KANVVA A SRK+ L I M + QE N + + + R
Sbjct: 1185 DMSIHYHPGKANVVADALSRKSYCTALCIEGMCEELRQEFGHLNVGIVEHGFVAA-LEAR 1243
Query: 611 HELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
L+ +V+ +Q DP+ +L K A++FL
Sbjct: 1244 PTLVDQVRAAQVNDPEIAELKKNMRVGKARDFL 1276
>gb|ABB47435.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1755
Score = 183 bits (465), Expect = 6e-45
Identities = 120/332 (36%), Positives = 169/332 (50%), Gaps = 25/332 (7%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G I+TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 1157 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHP 1216
Query: 762 *EGKCSGTCLQQKGQCSHADNYGMEIPTGVECME-SDENGHSN-------FMCQYLGEA* 607
+ L +K C+ GM C E E GH N F+
Sbjct: 1217 GKANVVADALSRKSYCTALCIEGM-------CEELRQEFGHLNVGIVEHGFVAALEARPT 1269
Query: 606 IAK*G*NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEA 427
+ P+I L + + G ++F E+ + ++C +D+ L++ IL EA
Sbjct: 1270 LVDQVRAAQVNDPEIAELKKNMRVGKARDFLEDEHGTIWMGERLCVPDDKELKDLILTEA 1329
Query: 426 QQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQ 247
Q ++YSIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQ
Sbjct: 1330 HQ-TQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQ 1388
Query: 246 IPERKWEFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRD 109
IPE KWE I MDF GL T K+ H + + T + ++L ++LY
Sbjct: 1389 IPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRL-VELYLAR 1447
Query: 108 CTAARSTSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1448 IMCLHGVPKKIVSDRGSQFTSKFWQKLQEELG 1479
Score = 144 bits (364), Expect = 4e-32
Identities = 117/333 (35%), Positives = 167/333 (50%), Gaps = 24/333 (7%)
Frame = -3
Query: 1439 NFVLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVV 1263
+ VLE L++ +LYAK +KC+FWL V FLGH ++ +G+ VDPS V V +W P+T + +
Sbjct: 989 HLVLEKLKEHQLYAKFNKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQI 1048
Query: 1262 GSFLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR------- 1104
SFLGL GYYRRFI++FS+I P+ L+ + + ++ E K+
Sbjct: 1049 RSFLGLAGYYRRFIENFSRIARPMTQLLKKDEKFKWT---AECDKSFEELKKKLVSAPVL 1105
Query: 1103 SRPSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL----- 939
P ++ C GLG VLMQEGRV+A+ASR+L+P+E NY TH+LEL
Sbjct: 1106 ILPDPTKDFQVYCD---ASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLELAAVVH 1162
Query: 938 -----RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTN 786
R + + R IYT+ L F+Q R+ W EL K
Sbjct: 1163 ALKIWRHYLIGNRC--EIYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDY 1208
Query: 785 HFDI*YHHRKANVVAHAFSRKASVATLII--MEWKSLQELSVWNPMRTDTQILCVNISVR 612
I YH KANVVA A SRK+ L I M + QE N + + + R
Sbjct: 1209 DMSIHYHPGKANVVADALSRKSYCTALCIEGMCEELRQEFGHLNVGIVEHGFVAA-LEAR 1267
Query: 611 HELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
L+ +V+ +Q DP+ +L K A++FL
Sbjct: 1268 PTLVDQVRAAQVNDPEIAELKKNMRVGKARDFL 1300
>gb|AAT93968.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAT94008.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1500
Score = 182 bits (461), Expect = 2e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 902 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 961
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 962 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1020
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1021 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1079
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1080 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1139
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1140 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHSTYSGKKLA-ELYLARIMCLHG 1198
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1199 VPKKIVSDRGSQFTSKFWQKLQEELG 1224
Score = 142 bits (359), Expect = 1e-31
Identities = 115/334 (34%), Positives = 167/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 736 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 795
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 796 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 852
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 853 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 909
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 910 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 955
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 956 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 1011
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1012 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFV 1045
>gb|ABA98232.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 181 bits (460), Expect = 3e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 924 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 983
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 984 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1042
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1043 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1101
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1102 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1161
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1162 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1220
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1221 VPKKIVSDRGSQFTSKFWQKLQEELG 1246
Score = 143 bits (360), Expect = 1e-31
Identities = 114/334 (34%), Positives = 168/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V EW P T T V S
Sbjct: 758 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTEWTPPRTVTQVRS 817
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R +
Sbjct: 818 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLTL 874
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +G+G VLMQ+G+++++ASR+L+P+E NY TH+LEL
Sbjct: 875 PDQTKDFQVYCD---ASRQGVGCVLMQDGKLVSYASRQLRPHEGNYPTHDLELAAVVHAL 931
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 932 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 977
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 978 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 1033
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1034 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFV 1067
>gb|AAL31078.1|AC091749_7 putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 181 bits (460), Expect = 3e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 926 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 985
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 986 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1044
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1045 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1103
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1104 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1163
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1164 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1222
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1223 VPKKIVSDRGSQFTSKFWQKLQEELG 1248
Score = 142 bits (359), Expect = 1e-31
Identities = 115/334 (34%), Positives = 167/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 760 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 819
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 820 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 876
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 877 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 933
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 934 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 979
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 980 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 1035
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1036 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFV 1069
>emb|CAD40212.2| OSJNBa0019J05.10 [Oryza sativa Japonica Group]
Length = 1525
Score = 181 bits (460), Expect = 3e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 927 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 986
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 987 GKANVVADALSRKSYCNVAWVEELCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1045
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1046 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1104
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1105 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1164
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1165 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1223
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1224 VPKKIVSDRGSQFTSKFWQKLQEELG 1249
Score = 142 bits (359), Expect = 1e-31
Identities = 115/334 (34%), Positives = 167/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 761 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 820
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 821 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 877
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 878 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 934
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 935 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 980
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 981 GIHYHPGKANVVADALSRKSYCNVAWVEELCCEVQRDLEHLN----LGIVEHGFVAALEA 1036
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1037 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFV 1070
>gb|AAP53008.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1595
Score = 181 bits (460), Expect = 3e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 997 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 1056
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 1057 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1115
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1116 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1174
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1175 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1234
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1235 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1293
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1294 VPKKIVSDRGSQFTSKFWQKLQEELG 1319
Score = 142 bits (359), Expect = 2e-31
Identities = 115/334 (34%), Positives = 167/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 831 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 890
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 891 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 947
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 948 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 1004
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 1005 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 1050
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 1051 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 1106
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1107 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFV 1140
>gb|AAO38446.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gb|AAX95637.1| Reverse transcriptase (RNA-dependent DNA polymerase), putative [Oryza
sativa Japonica Group]
gb|ABF98388.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1229
Score = 181 bits (459), Expect = 3e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 631 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 690
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 691 GKANVVADALSRKSYCNVAWVEELCCEVQHDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 749
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 750 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 808
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 809 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 868
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 869 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 927
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 928 VPKKIVSDRGSQFTSKFWQKLQEELG 953
Score = 142 bits (358), Expect = 2e-31
Identities = 114/331 (34%), Positives = 170/331 (51%), Gaps = 24/331 (7%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 465 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 524
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 525 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 581
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 582 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 638
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 639 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 684
Query: 779 DI*YHHRKANVVAHAFSRKA--SVATLIIMEWKSLQELSVWNPMRTDTQILCVNISVRHE 606
I YH KANVVA A SRK+ +VA + + + +L N + + + +
Sbjct: 685 GIHYHPGKANVVADALSRKSYCNVAWVEELCCEVQHDLEHLNLGIVEHGFVAA-LEAQPT 743
Query: 605 LLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 744 LVEQVRIAQASDPEIAELKKNMRVGKARGFV 774
>emb|CAE02516.2| OSJNBb0003A12.3 [Oryza sativa Japonica Group]
emb|CAE05109.2| OSJNBa0001M07.5 [Oryza sativa Japonica Group]
Length = 1471
Score = 181 bits (459), Expect = 3e-44
Identities = 116/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 873 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 932
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 933 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 991
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 992 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1050
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWW++M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1051 SIHPGSTKMYQDLKEKFWWISMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1110
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1111 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1169
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1170 VPKKIVSDRGSQFTSKFWQKLQEELG 1195
Score = 142 bits (359), Expect = 1e-31
Identities = 115/334 (34%), Positives = 167/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 707 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 766
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 767 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 823
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 824 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 880
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 881 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 926
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 927 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 982
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 983 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFV 1016
>gb|AAT69667.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 181 bits (459), Expect = 4e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 926 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 985
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 986 GKANVVADALSRKSYCNVAWVEELCCEVQHDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1044
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1045 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1103
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1104 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1163
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1164 EEIGMDFITGLPRTSSGHDSIWVVIDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1222
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1223 VPKKIVSDRGSQFTSKFWQKLQEELG 1248
Score = 142 bits (358), Expect = 2e-31
Identities = 114/331 (34%), Positives = 170/331 (51%), Gaps = 24/331 (7%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 760 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 819
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 820 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 876
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 877 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 933
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 934 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 979
Query: 779 DI*YHHRKANVVAHAFSRKA--SVATLIIMEWKSLQELSVWNPMRTDTQILCVNISVRHE 606
I YH KANVVA A SRK+ +VA + + + +L N + + + +
Sbjct: 980 GIHYHPGKANVVADALSRKSYCNVAWVEELCCEVQHDLEHLNLGIVEHGFVAA-LEAQPT 1038
Query: 605 LLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1039 LVEQVRIAQASDPEIAELKKNMRVGKARGFV 1069
>gb|AAV31367.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1611
Score = 181 bits (459), Expect = 4e-44
Identities = 119/326 (36%), Positives = 166/326 (50%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G I+TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 1090 LAAVVHALKIWRHYLIGNRCEIYTDHKSLKYIFTQLDLNLRQRRWLELIKDYDVGIHYHP 1149
Query: 762 *EGKCSGTCLQQKGQCSHADNYGM--EIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ D G+ E+ +E + G F+ + +
Sbjct: 1150 GKANVVADALCRKSHCNTLDVRGIPPELNQQMEALNLSIVGRG-FLATLEAKPTLLDQIR 1208
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P + L++ + +G F+ E+ L N+VC +D L+ IL EA + S Y
Sbjct: 1209 EAQKNDPDMRGLLKNMKQGKAAGFTEDEHGTLWNGNRVCVPDDRELKQLILQEAHE-SPY 1267
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM+ DLK+ +WWV+MK+ A C CQRVK EH+RP+GLL PLQ+PE KW
Sbjct: 1268 SIHPGSTKMYLDLKEKYWWVSMKREIVEFVALCDVCQRVKAEHKRPAGLLQPLQVPEWKW 1327
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
+ I MDF GL T K+ + +K T KLA +LY +
Sbjct: 1328 DEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLA-ELYFARIVSLHG 1386
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R FWK L E++G
Sbjct: 1387 VPKKIVSDRGSQFTSHFWKKLQEELG 1412
Score = 150 bits (379), Expect = 5e-34
Identities = 117/321 (36%), Positives = 160/321 (49%), Gaps = 20/321 (6%)
Frame = -3
Query: 1418 QDKLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGSFLGLVG 1239
+ +LYAK SKCEFWL V FLGH +S KG+ VDP V V +WKQP+T T + SFLGL G
Sbjct: 930 EHQLYAKLSKCEFWLSEVKFLGHVISAKGVAVDPETVTAVTDWKQPKTVTQIRSFLGLAG 989
Query: 1238 YYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKRSRPSS----SEWK*R 1071
YYRRFI++FSKI P+ L+ + V Q +A +T +R S + +
Sbjct: 990 YYRRFIENFSKIARPMTQLLKKEEKFVWS---PQCEKAFQTLKERLVSSPVLILPDTRKD 1046
Query: 1070 LCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL----------RQWCLH 921
+GLG VLMQEG V+A+ASR+L+P+E NY TH+LEL R + +
Sbjct: 1047 FMVYCDASRQGLGCVLMQEGHVVAYASRQLRPHEDNYPTHDLELAAVVHALKIWRHYLIG 1106
Query: 920 *RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHFDI*YHHRKA 753
R IYT+ L F+Q R+ W EL K I YH KA
Sbjct: 1107 NRC--EIYTDHKSLKYIFTQLDLNL------------RQRRWLELIKDYDVGIHYHPGKA 1152
Query: 752 NVVAHAFSRKASVATLII--MEWKSLQELSVWNPMRTDTQILCVNISVRHELLSEVKTSQ 579
NVVA A RK+ TL + + + Q++ N L + + LL +++ +Q
Sbjct: 1153 NVVADALCRKSHCNTLDVRGIPPELNQQMEALNLSIVGRGFL-ATLEAKPTLLDQIREAQ 1211
Query: 578 ERDPKFGDLWKKF*REMAKNF 516
+ DP L K + A F
Sbjct: 1212 KNDPDMRGLLKNMKQGKAAGF 1232
>gb|AAX96295.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group]
gb|ABA91783.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1760
Score = 181 bits (459), Expect = 4e-44
Identities = 116/325 (35%), Positives = 168/325 (51%), Gaps = 18/325 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 1176 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMSIHYHP 1235
Query: 762 *EGKCSGTCLQQKGQCSHADNYGM-EIPTGVECMESDENGHSNFMCQYLGEA*IAK*G*N 586
+ L +K C+ GM E V +E+ + ++ IA+
Sbjct: 1236 GKANVVADALSRKSYCTALCIEGMCEELRFVAALEARPTLVDQVRAAQVNDSEIAE---- 1291
Query: 585 VTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRYS 406
L + + G ++F E+ + ++C +D+ L++ IL EA Q ++YS
Sbjct: 1292 ----------LKKNMRVGKARDFHEDEHGTIWLGERLCVPDDKELKDLILTEAHQ-TQYS 1340
Query: 405 IHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKWE 226
IHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KWE
Sbjct: 1341 IHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKWE 1400
Query: 225 FITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARST 88
I MDF GL T K+ H + + T + ++LA +LY
Sbjct: 1401 EIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYTGKRLA-ELYLSRIICLHGV 1459
Query: 87 SRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1460 PKKIVSDRGSQFTSKFWQKLQEELG 1484
Score = 138 bits (348), Expect = 4e-30
Identities = 115/332 (34%), Positives = 158/332 (47%), Gaps = 37/332 (11%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL V FLGH ++ +G+ VDPS V V +W P+T + + S
Sbjct: 1010 VLEKLKEHQLYAKFSKCDFWLTEVKFLGHVITAQGVAVDPSNVESVTKWTPPKTVSQIRS 1069
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKRSRPSSSEWK 1077
FLGL GYYRRFI++FS+I P+ L+ + +F E S E K
Sbjct: 1070 FLGLAGYYRRFIENFSRIARPMTRLLKKDE---------KFKWTAECD-----KSFEELK 1115
Query: 1076 *RLCRL**RL---------------EKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLE 942
+L + GLG VLMQEGRV+A+ASR+L+P+E NY TH+LE
Sbjct: 1116 KKLVSAPVLILPDQMKDFQVYCDASRHGLGCVLMQEGRVVAYASRQLRPHEGNYPTHDLE 1175
Query: 941 L----------RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWS 801
L R + + R +YT+ L F+Q R+ W
Sbjct: 1176 LAAVVHALKIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWL 1221
Query: 800 EL-KTNHFDI*YHHRKANVVAHAFSRKASVATLII----MEWKSLQELSVWNPMRTDTQI 636
EL K I YH KANVVA A SRK+ L I E + + L + +
Sbjct: 1222 ELIKDYDMSIHYHPGKANVVADALSRKSYCTALCIEGMCEELRFVAALEARPTLVDQVRA 1281
Query: 635 LCVNISVRHELLSEVKTSQERD---PKFGDLW 549
VN S EL ++ + RD + G +W
Sbjct: 1282 AQVNDSEIAELKKNMRVGKARDFHEDEHGTIW 1313
>dbj|BAB62635.1| putative polyprotein [Oryza sativa Japonica Group]
dbj|BAB92137.1| putative polyprotein [Oryza sativa Japonica Group]
gb|AAU44248.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 181 bits (458), Expect = 5e-44
Identities = 117/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 926 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 985
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 986 GKANVVADALSRKSYCNVAWVEQLCGEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1044
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1045 IAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1103
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1104 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1163
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1164 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLSRIMCLHG 1222
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1223 VPKKIVSDRGSQFTSKFWQKLQEELG 1248
Score = 142 bits (359), Expect = 1e-31
Identities = 114/331 (34%), Positives = 171/331 (51%), Gaps = 24/331 (7%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 760 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 819
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 820 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 876
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 877 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 933
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 934 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 979
Query: 779 DI*YHHRKANVVAHAFSRKA--SVATLIIMEWKSLQELSVWNPMRTDTQILCVNISVRHE 606
I YH KANVVA A SRK+ +VA + + + ++L N + + + +
Sbjct: 980 GIHYHPGKANVVADALSRKSYCNVAWVEQLCGEVQRDLEHLNLGIVEHGFVAA-LEAQPT 1038
Query: 605 LLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1039 LVEQVRIAQASDPEIAELKKNMRVGKARGFV 1069
>gb|ABA96940.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1112
Score = 180 bits (457), Expect = 5e-44
Identities = 117/326 (35%), Positives = 167/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 714 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 773
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 774 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 832
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 833 IAQASDPEIAELKKNMRVGKARGFIEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 891
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP GLL PLQIPE KW
Sbjct: 892 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPVGLLQPLQIPEWKW 951
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 952 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLARIMCLHG 1010
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1011 VPKKIVSDRGSQFTSKFWQKLQEELG 1036
Score = 141 bits (355), Expect = 4e-31
Identities = 114/334 (34%), Positives = 167/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V EW P T T V S
Sbjct: 548 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTEWTPPRTVTQVRS 607
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R +
Sbjct: 608 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLTL 664
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLM++G+V+++ASR+L+ +E NY TH+LEL
Sbjct: 665 PDQTKDFQVYCD---ASRQGLGCVLMKDGKVVSYASRQLRSHEGNYPTHDLELAAVVHAL 721
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 722 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 767
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 768 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 823
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 824 QPTLVEQVRIAQASDPEIAELKKNMRVGKARGFI 857
>gb|ABF96568.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1548
Score = 180 bits (457), Expect = 6e-44
Identities = 116/326 (35%), Positives = 168/326 (51%), Gaps = 19/326 (5%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 950 LAAVVHALKIWRHYLISNRCEVYTDHKSLKYIFTQADLNLRQRRWLELIKDYDMGIHYHP 1009
Query: 762 *EGKCSGTCLQQKGQCSHA--DNYGMEIPTGVECMESDENGHSNFMCQYLGEA*IAK*G* 589
+ L +K C+ A + E+ +E + H F+ + + +
Sbjct: 1010 GKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLNLGIVEHG-FVAALEAQPTLVEQVR 1068
Query: 588 NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILGEAQQHSRY 409
P+I L + + G+ + F E + ++C ++ L++ IL EA Q ++Y
Sbjct: 1069 IAQASDPEIAELKKNMRVGEARGFVEDEQGTIWMGERLCVPENKELKDLILTEAHQ-TQY 1127
Query: 408 SIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*PLQIPERKW 229
SIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL PLQIPE KW
Sbjct: 1128 SIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQPLQIPEWKW 1187
Query: 228 EFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYPRDCTAARS 91
E I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1188 EEIGMDFITGLPRTSSGHDSIWVVVDRLTKVAHFIPVHTTYSGKKLA-ELYLSRIMCLHG 1246
Query: 90 TSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1247 VPKKIVSDRGSQFTSKFWQKLQEELG 1272
Score = 144 bits (364), Expect = 4e-32
Identities = 116/334 (34%), Positives = 168/334 (50%), Gaps = 27/334 (8%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 784 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 843
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + V+ +R+ E +R
Sbjct: 844 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---VECNRSFEELKRRLVSAPVLIL 900
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 901 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 957
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 958 KIWRHYLISNRC--EVYTDHKSLKYIFTQADLNL------------RQRRWLELIKDYDM 1003
Query: 779 DI*YHHRKANVVAHAFSRK-----ASVATLIIMEWKSLQELSVWNPMRTDTQILCVNISV 615
I YH KANVVA A SRK A V L + L+ L+ + +
Sbjct: 1004 GIHYHPGKANVVADALSRKSYCNVAWVEQLCCEVQRDLEHLN----LGIVEHGFVAALEA 1059
Query: 614 RHELLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
+ L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1060 QPTLVEQVRIAQASDPEIAELKKNMRVGEARGFV 1093
>gb|AAT47081.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1524
Score = 179 bits (455), Expect = 1e-43
Identities = 120/334 (35%), Positives = 168/334 (50%), Gaps = 27/334 (8%)
Frame = -2
Query: 942 VAAMVFALKKWRHYLYGAAFTIFTDHKSLKYLFSQKDLNLR*RRWMERIED*SLRYLVPP 763
+AA+V ALK WRHYL G ++TDHKSLKY+F+Q DLNLR RRW+E I+D + P
Sbjct: 926 LAAVVHALKIWRHYLIGNRCEVYTDHKSLKYIFTQPDLNLRQRRWLELIKDYDMGIHYHP 985
Query: 762 *EGKCSGTCLQQKGQCSHADNYGMEIPTGVE---CMESDENGHSN-------FMCQYLGE 613
+ L +K C+ A VE C + GH N F+ +
Sbjct: 986 GKANVVADALSRKSHCNVA---------WVEELCCEVQRDLGHLNLGIVEHGFVAALEAQ 1036
Query: 612 A*IAK*G*NVTGERPKIWRLVEKVLKGDGQEFSVAEYRILRFKNQVCATNDEVLRNKILG 433
+ + P+I L + + G + F E + ++C ++ L++ IL
Sbjct: 1037 PTLVEQVRIAQASDPEIAELKKNMRVGKARGFVEDEQGTIWMGERLCVPENKELKDLILT 1096
Query: 432 EAQQHSRYSIHPGDNKMHKDLKQHFWWVNMKKSDNRVCARCLTCQRVKVEHQRPSGLL*P 253
EA Q ++YSIHPG KM++DLK+ FWWV+M++ A C CQRVK EHQRP+GLL P
Sbjct: 1097 EAHQ-TQYSIHPGSTKMYQDLKEKFWWVSMRREIAEFVALCDVCQRVKAEHQRPAGLLQP 1155
Query: 252 LQIPERKWEFITMDFSNGLA*TH--------------KITHSLSIKKTDSLQKLAIDLYP 115
LQIPE KWE I MDF GL T K+ H + + T S +KLA +LY
Sbjct: 1156 LQIPEWKWEEIGMDFITGLPRTSSGHDSIWVVVDRLTKMAHFIPVHTTYSGKKLA-ELYL 1214
Query: 114 RDCTAARSTSRQCFRQR---LVQRFWKCLHEKMG 22
++ R +FW+ L E++G
Sbjct: 1215 ARIMCLHGVPKKIVSDRGSQFTSKFWQKLQEELG 1248
Score = 142 bits (359), Expect = 1e-31
Identities = 114/331 (34%), Positives = 171/331 (51%), Gaps = 24/331 (7%)
Frame = -3
Query: 1433 VLESLQD-KLYAKNSKCEFWLEMVTFLGHRVSGKGITVDPSKVMKVVEWKQPETATVVGS 1257
VLE L++ +LYAK SKC+FWL+ V FLGH V+ +G+ VDP+ V V +W P T T V S
Sbjct: 760 VLEKLKEHQLYAKFSKCDFWLKEVQFLGHIVNAQGVAVDPANVESVTKWTPPRTVTQVRS 819
Query: 1256 FLGLVGYYRRFIKDFSKIIVPLLIDLEASQIRVEQ*V*VQFSRAEETTHKR-------SR 1098
FLGL GYYRRFI++FSKI P+ L+ + + + +R+ E +R
Sbjct: 820 FLGLAGYYRRFIENFSKIAKPMTQLLKKEEKFIWS---AECNRSFEELKRRLVSAPVLIL 876
Query: 1097 PSSSEWK*RLCRL**RLEKGLGAVLMQEGRVIAHASRKLKPYEANYLTHNLEL------- 939
P ++ C +GLG VLMQ+G+V+++ASR+L+P+E NY TH+LEL
Sbjct: 877 PDQTKDFQVYCD---ASRQGLGCVLMQDGKVVSYASRQLRPHEGNYPTHDLELAAVVHAL 933
Query: 938 ---RQWCLH*RSGDTIYTEQHLL---FSQTTXXXXXXXXXXXXX*GREGGWSEL-KTNHF 780
R + + R +YT+ L F+Q R+ W EL K
Sbjct: 934 KIWRHYLIGNRC--EVYTDHKSLKYIFTQPDLNL------------RQRRWLELIKDYDM 979
Query: 779 DI*YHHRKANVVAHAFSRKA--SVATLIIMEWKSLQELSVWNPMRTDTQILCVNISVRHE 606
I YH KANVVA A SRK+ +VA + + + ++L N + + + +
Sbjct: 980 GIHYHPGKANVVADALSRKSHCNVAWVEELCCEVQRDLGHLNLGIVEHGFVAA-LEAQPT 1038
Query: 605 LLSEVKTSQERDPKFGDLWKKF*REMAKNFL 513
L+ +V+ +Q DP+ +L K A+ F+
Sbjct: 1039 LVEQVRIAQASDPEIAELKKNMRVGKARGFV 1069